Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807530 | XP_003616200.1 | 93.671 | 158 | 5 | 1 | 1 | 158 | 1 | 153 | 5.23e-81 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807530 | G7KFX1 | 93.671 | 158 | 5 | 1 | 1 | 158 | 1 | 153 | 2.50e-81 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0807530 | 0.804803 | 1.812421e-49 | -8.615850e-47 |
| Msa0626450 | Msa0807530 | 0.801839 | 7.452032e-49 | -8.615850e-47 |
| Msa0664600 | Msa0807530 | 0.804886 | 1.741901e-49 | -8.615850e-47 |
| Msa0736620 | Msa0807530 | 0.830207 | 3.345121e-55 | -8.615850e-47 |
| Msa0807530 | Msa0841340 | 0.803632 | 3.177521e-49 | -8.615850e-47 |
| Msa0807530 | Msa0856130 | 0.816495 | 5.368501e-52 | -8.615850e-47 |
| Msa0464680 | Msa0807530 | 0.809401 | 1.927109e-50 | -8.615850e-47 |
| Msa0467430 | Msa0807530 | 0.808070 | 3.710013e-50 | -8.615850e-47 |
| Msa0266180 | Msa0807530 | 0.802283 | 6.038309e-49 | -8.615850e-47 |
| Msa0335800 | Msa0807530 | 0.803906 | 2.787940e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807530 | MtrunA17_Chr5g0434081 | 93.671 | 158 | 5 | 1 | 1 | 158 | 1 | 153 | 4.81e-85 | 251 |
| Msa0807530 | MtrunA17_Chr5g0443491 | 65.000 | 120 | 39 | 1 | 42 | 158 | 64 | 183 | 3.62e-44 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807530 | AT5G16550.1 | 41.916 | 167 | 84 | 2 | 5 | 158 | 31 | 197 | 2.16e-32 | 119 |
Find 65 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTATGCTTCTCCTTC+TGG | 0.191402 | 5_3:+29008822 | Msa0807530:CDS |
| CAATTTCAACAGTTGTCTTT+TGG | 0.213908 | 5_3:+29008971 | Msa0807530:CDS |
| AACTGTTGAAATTGCAAATA+TGG | 0.243964 | 5_3:-29008962 | None:intergenic |
| GGTGGTGGCCGGAGGATTCT+TGG | 0.250332 | 5_3:+29008888 | Msa0807530:CDS |
| CACATCCGACCCTGACATTC+TGG | 0.267184 | 5_3:+29011741 | Msa0807530:CDS |
| TCGACCTCTCCTTCTCATTT+CGG | 0.313356 | 5_3:+29007200 | Msa0807530:CDS |
| CTAGAAGCTTCGGGAATATA+AGG | 0.325702 | 5_3:-29007129 | None:intergenic |
| TTAGTGACAGCAATATATAT+TGG | 0.354686 | 5_3:+29008925 | Msa0807530:CDS |
| TTGAGTTCTTCGATCTGAAC+TGG | 0.371062 | 5_3:+29006958 | Msa0807530:five_prime_UTR |
| GGGTACTGAAGACGAGATAC+TGG | 0.373268 | 5_3:+29011930 | Msa0807530:CDS |
| TTCATTTCTTTGGTGGTGGC+CGG | 0.390732 | 5_3:+29008877 | Msa0807530:CDS |
| GTGTAGTTTCTAGAAGCTTC+GGG | 0.394632 | 5_3:-29007138 | None:intergenic |
| CCCCATGGTGTGAGAACAAA+AGG | 0.398301 | 5_3:+29011766 | Msa0807530:CDS |
| ATTGCTCTTGTTGCCTTGAC+AGG | 0.399432 | 5_3:+29008793 | Msa0807530:CDS |
| GCCATTCCCAGCGGGACTCC+TGG | 0.404650 | 5_3:+29011796 | Msa0807530:CDS |
| AGTGTAGTTTCTAGAAGCTT+CGG | 0.407995 | 5_3:-29007139 | None:intergenic |
| CCATGGGGATCCAGAATGTC+AGG | 0.418608 | 5_3:-29011751 | None:intergenic |
| AACCTTCTTATACTGCTAAT+CGG | 0.456832 | 5_3:+29007088 | Msa0807530:CDS |
| AACCAGAAGGAGAAGCATAA+AGG | 0.481508 | 5_3:-29008824 | None:intergenic |
| AATGTCAGGGTCGGATGTGC+CGG | 0.487022 | 5_3:-29011737 | None:intergenic |
| ATCCGATTAGCAGTATAAGA+AGG | 0.498829 | 5_3:-29007090 | None:intergenic |
| AACAATGTAAACCATGTGAA+TGG | 0.511022 | 5_3:+29011889 | Msa0807530:CDS |
| ACCAGGAGTCCCGCTGGGAA+TGG | 0.512076 | 5_3:-29011797 | None:intergenic |
| GAAGGAGAAGCATAAAGGTA+AGG | 0.513668 | 5_3:-29008819 | None:intergenic |
| ACGACCACCAGGAGTCCCGC+TGG | 0.514937 | 5_3:-29011803 | None:intergenic |
| TGGTCACGTCATGTCTCCCA+TGG | 0.540514 | 5_3:+29011909 | Msa0807530:CDS |
| AATGAGAAGGAGAGGTCGAA+GGG | 0.543624 | 5_3:-29007196 | None:intergenic |
| GAGATGGCAGAGAAAGAAAA+CGG | 0.543810 | 5_3:+29006982 | Msa0807530:exon |
| GCGGGACTCCTGGTGGTCGT+AGG | 0.543965 | 5_3:+29011806 | Msa0807530:CDS |
| ACACTCGCCGTGTTCTTCGC+TGG | 0.544785 | 5_3:+29007157 | Msa0807530:CDS |
| GTGGCTATTCTGATAACTGC+AGG | 0.545502 | 5_3:+29009000 | Msa0807530:CDS |
| GGTGCGGTGCCATTCCCAGC+GGG | 0.558448 | 5_3:+29011788 | Msa0807530:CDS |
| AATGAAAAGAGAGACAATGA+TGG | 0.559549 | 5_3:-29008860 | None:intergenic |
| ATTTCTTTGGTGGTGGCCGG+AGG | 0.560839 | 5_3:+29008880 | Msa0807530:CDS |
| GTTCTTCGCTGGTCTCGTCA+AGG | 0.561562 | 5_3:+29007168 | Msa0807530:CDS |
| TTCGATCTGAACTGGAGAGA+TGG | 0.561622 | 5_3:+29006966 | Msa0807530:exon |
| GACCACACCGCATACACTGC+AGG | 0.562813 | 5_3:-29011839 | None:intergenic |
| GAAAAGAGCCAAGAATCCTC+CGG | 0.567366 | 5_3:-29008896 | None:intergenic |
| TATCTCGTCTTCAGTACCCA+TGG | 0.570027 | 5_3:-29011926 | None:intergenic |
| TGAAGACGAGATACTGGGAC+AGG | 0.572839 | 5_3:+29011936 | Msa0807530:CDS |
| AAATGAGAAGGAGAGGTCGA+AGG | 0.579200 | 5_3:-29007197 | None:intergenic |
| CATTGATAGTTGCAACCAGA+AGG | 0.586472 | 5_3:-29008837 | None:intergenic |
| TGCAGTGTATGCGGTGTGGT+CGG | 0.587332 | 5_3:+29011841 | Msa0807530:CDS |
| CGACCACCAGGAGTCCCGCT+GGG | 0.592727 | 5_3:-29011802 | None:intergenic |
| ATCTCGTCTTCAGTACCCAT+GGG | 0.602365 | 5_3:-29011925 | None:intergenic |
| ATACTGGGACAGGAGGATAC+CGG | 0.602447 | 5_3:+29011946 | Msa0807530:CDS |
| AAAGGTAAGGAGTCCTGTCA+AGG | 0.607151 | 5_3:-29008806 | None:intergenic |
| TCTTGTTATGCATAATACGT+TGG | 0.610663 | 5_3:-29014011 | None:intergenic |
| ACGCAGACCTGCAGTGTATG+CGG | 0.611225 | 5_3:+29011832 | Msa0807530:CDS |
| GGTACTGAAGACGAGATACT+GGG | 0.614051 | 5_3:+29011931 | Msa0807530:CDS |
| GACGAGACCAGCGAAGAACA+CGG | 0.623295 | 5_3:-29007164 | None:intergenic |
| TGCAGTTATCAGAATAGCCA+CGG | 0.625555 | 5_3:-29008998 | None:intergenic |
| GTAACCGAACCGAAATGAGA+AGG | 0.629050 | 5_3:-29007209 | None:intergenic |
| ATTCCCAGCGGGACTCCTGG+TGG | 0.630710 | 5_3:+29011799 | Msa0807530:CDS |
| GGGATCCAGAATGTCAGGGT+CGG | 0.640122 | 5_3:-29011746 | None:intergenic |
| AGACGAGATACTGGGACAGG+AGG | 0.641915 | 5_3:+29011939 | Msa0807530:CDS |
| CCTGACATTCTGGATCCCCA+TGG | 0.644460 | 5_3:+29011751 | Msa0807530:CDS |
| GGTCACGTCATGTCTCCCAT+GGG | 0.650637 | 5_3:+29011910 | Msa0807530:CDS |
| CGAACCGAAATGAGAAGGAG+AGG | 0.653048 | 5_3:-29007204 | None:intergenic |
| ACATGACGTGACCATTCACA+TGG | 0.655441 | 5_3:-29011900 | None:intergenic |
| GGGAATATAAGGAGAGAGTG+AGG | 0.663880 | 5_3:-29007118 | None:intergenic |
| CCCATGGTGTGAGAACAAAA+GGG | 0.663995 | 5_3:+29011767 | Msa0807530:CDS |
| GGGTGCGGTGCCATTCCCAG+CGG | 0.685698 | 5_3:+29011787 | Msa0807530:CDS |
| GGTGTGAGAACAAAAGGGTG+CGG | 0.696480 | 5_3:+29011772 | Msa0807530:CDS |
| CATGGGGATCCAGAATGTCA+GGG | 0.700414 | 5_3:-29011750 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATATGATTTTGTTT+TGG | - | chr5_3:29007490-29007509 | None:intergenic | 10.0% |
| !!! | TAAATTAATAATGTTTTTCA+GGG | + | chr5_3:29007513-29007532 | Msa0807530:intron | 10.0% |
| !! | CATAACTTATTATTAATTAT+TGG | - | chr5_3:29013496-29013515 | None:intergenic | 10.0% |
| !! | CAATAATTAATAATAAGTTA+TGG | + | chr5_3:29013494-29013513 | Msa0807530:intron | 10.0% |
| !!! | CTAAATTAATAATGTTTTTC+AGG | + | chr5_3:29007512-29007531 | Msa0807530:intron | 15.0% |
| !! | CATTCAAAATTATGAAATTA+TGG | - | chr5_3:29007959-29007978 | None:intergenic | 15.0% |
| !! | ATAGTAAATAATTCATTTAC+CGG | - | chr5_3:29012066-29012085 | None:intergenic | 15.0% |
| !!! | TTATTATAATGTATTTCTGA+GGG | + | chr5_3:29012431-29012450 | Msa0807530:intron | 15.0% |
| !!! | CATATTTAAATACTTTTCAT+TGG | - | chr5_3:29012636-29012655 | None:intergenic | 15.0% |
| !!! | TTTTATTACTTTTTTAAACG+TGG | + | chr5_3:29012814-29012833 | Msa0807530:intron | 15.0% |
| !!! | TTTATTACTTTTTTAAACGT+GGG | + | chr5_3:29012815-29012834 | Msa0807530:intron | 15.0% |
| !! | TGTTAATCATGTTAAAAATG+TGG | + | chr5_3:29007760-29007779 | Msa0807530:intron | 20.0% |
| !! | CTTCTATATTTATTCTATGT+GGG | + | chr5_3:29008446-29008465 | Msa0807530:intron | 20.0% |
| !! | CAATTAAAGAGAAAAGAAAA+AGG | - | chr5_3:29009044-29009063 | None:intergenic | 20.0% |
| !! | AATGACATGTAGATATAAAT+CGG | + | chr5_3:29009132-29009151 | Msa0807530:intron | 20.0% |
| !!! | AATTTTTTCTGATCATTGAT+TGG | + | chr5_3:29009214-29009233 | Msa0807530:intron | 20.0% |
| !!! | ATTTTTTCTGATCATTGATT+GGG | + | chr5_3:29009215-29009234 | Msa0807530:intron | 20.0% |
| !! | AATGAAAAATGCAATTAAGA+GGG | + | chr5_3:29010734-29010753 | Msa0807530:intron | 20.0% |
| !!! | AAATAAGTCGTTTGAAATTA+CGG | + | chr5_3:29011674-29011693 | Msa0807530:intron | 20.0% |
| !!! | GTTATTATAATGTATTTCTG+AGG | + | chr5_3:29012430-29012449 | Msa0807530:intron | 20.0% |
| !!! | TTTAATAGAAGTACCTATTA+AGG | + | chr5_3:29012573-29012592 | Msa0807530:intron | 20.0% |
| !! | GTTTAATATGTAAAGATAGT+GGG | - | chr5_3:29012660-29012679 | None:intergenic | 20.0% |
| !! | TGTTTAATATGTAAAGATAG+TGG | - | chr5_3:29012661-29012680 | None:intergenic | 20.0% |
| !!! | TATTACTCATTTTTACAAGT+GGG | + | chr5_3:29012694-29012713 | Msa0807530:intron | 20.0% |
| !!! | TTGTTTTGATTTTAAGATGA+TGG | - | chr5_3:29013072-29013091 | None:intergenic | 20.0% |
| !! | ACTTATTATTAATTATTGGC+AGG | - | chr5_3:29013492-29013511 | None:intergenic | 20.0% |
| !! | ACATATAAGATTAAGTTCAA+TGG | + | chr5_3:29013819-29013838 | Msa0807530:intron | 20.0% |
| !! | CATATAAGATTAAGTTCAAT+GGG | + | chr5_3:29013820-29013839 | Msa0807530:intron | 20.0% |
| !! | TTAATATTTTCTCTCTAGTC+AGG | - | chr5_3:29007910-29007929 | None:intergenic | 25.0% |
| ! | ACTAATTATTACATGCTTCA+CGG | - | chr5_3:29008284-29008303 | None:intergenic | 25.0% |
| ! | GCTTCTATATTTATTCTATG+TGG | + | chr5_3:29008445-29008464 | Msa0807530:intron | 25.0% |
| ! | TGATATAAAATGCAACCAAA+TGG | - | chr5_3:29008531-29008550 | None:intergenic | 25.0% |
| !! | GGTTGCATTTTATATCATTT+CGG | + | chr5_3:29008534-29008553 | Msa0807530:intron | 25.0% |
| !! | TGCTGATTACACTAAAAATA+TGG | - | chr5_3:29008691-29008710 | None:intergenic | 25.0% |
| ! | AATCAGCATATCAAGAAAAT+AGG | + | chr5_3:29008703-29008722 | Msa0807530:intron | 25.0% |
| ! | ATCAGCATATCAAGAAAATA+GGG | + | chr5_3:29008704-29008723 | Msa0807530:intron | 25.0% |
| !!! | TCCTTTTAGTTGAATGTTTA+TGG | + | chr5_3:29008740-29008759 | Msa0807530:intron | 25.0% |
| ! | ACCATAAACATTCAACTAAA+AGG | - | chr5_3:29008744-29008763 | None:intergenic | 25.0% |
| !! | GTTTCTTTTCAAATTTCTTC+AGG | + | chr5_3:29008762-29008781 | Msa0807530:intron | 25.0% |
| !!! | TTTTCAAATTTCTTCAGGTT+GGG | + | chr5_3:29008767-29008786 | Msa0807530:intron | 25.0% |
| ! | TTAGTGACAGCAATATATAT+TGG | + | chr5_3:29008925-29008944 | Msa0807530:CDS | 25.0% |
| ! | AACTGTTGAAATTGCAAATA+TGG | - | chr5_3:29008965-29008984 | None:intergenic | 25.0% |
| ! | TAAAGAGAAAAGAAAAAGGT+TGG | - | chr5_3:29009040-29009059 | None:intergenic | 25.0% |
| !!! | ATTGCTTTTTTTATGAAGAC+TGG | + | chr5_3:29009191-29009210 | Msa0807530:intron | 25.0% |
| ! | GAATGTGATATACAAGAAAT+TGG | + | chr5_3:29010210-29010229 | Msa0807530:intron | 25.0% |
| ! | CAATGAAAAATGCAATTAAG+AGG | + | chr5_3:29010733-29010752 | Msa0807530:intron | 25.0% |
| ! | TCAGATAAGACATAAATTCA+GGG | - | chr5_3:29010830-29010849 | None:intergenic | 25.0% |
| ! | TTCAGATAAGACATAAATTC+AGG | - | chr5_3:29010831-29010850 | None:intergenic | 25.0% |
| ! | GAAAAAACTTCCTCTTATAT+GGG | - | chr5_3:29010985-29011004 | None:intergenic | 25.0% |
| ! | TCAGATTTCGAATCAAATTA+CGG | + | chr5_3:29011143-29011162 | Msa0807530:intron | 25.0% |
| !!! | TTTCTGTTTTGTTACTAATC+TGG | + | chr5_3:29012305-29012324 | Msa0807530:intron | 25.0% |
| !!! | CTATTACTCATTTTTACAAG+TGG | + | chr5_3:29012693-29012712 | Msa0807530:intron | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr5_3:29012721-29012740 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | + | chr5_3:29012734-29012753 | Msa0807530:intron | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | + | chr5_3:29012735-29012754 | Msa0807530:intron | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr5_3:29012721-29012740 | None:intergenic | 25.0% |
| ! | ATTGCGGTATCAAAAATTAT+TGG | - | chr5_3:29013385-29013404 | None:intergenic | 25.0% |
| ! | ATTAATTATTGGCAGGTAAT+TGG | - | chr5_3:29013485-29013504 | None:intergenic | 25.0% |
| ! | GACGAAGAATTACTTAAATA+CGG | - | chr5_3:29013571-29013590 | None:intergenic | 25.0% |
| ! | GTATTTAAGTAATTCTTCGT+CGG | + | chr5_3:29013570-29013589 | Msa0807530:intron | 25.0% |
| ! | CGACTTAAATATAAGTATCA+CGG | - | chr5_3:29013635-29013654 | None:intergenic | 25.0% |
| !!! | AACTTATCTTTTTAACTGTC+GGG | - | chr5_3:29013705-29013724 | None:intergenic | 25.0% |
| !!! | GAACTTATCTTTTTAACTGT+CGG | - | chr5_3:29013706-29013725 | None:intergenic | 25.0% |
| ! | AGAATAATACATTGTACTAC+TGG | - | chr5_3:29013881-29013900 | None:intergenic | 25.0% |
| ! | GAACTCAATTTTCAGTTAGT+TGG | - | chr5_3:29006946-29006965 | None:intergenic | 30.0% |
| AACCTTCTTATACTGCTAAT+CGG | + | chr5_3:29007088-29007107 | Msa0807530:CDS | 30.0% | |
| TATTAACAATCGTTGTTCTG+AGG | + | chr5_3:29007399-29007418 | Msa0807530:intron | 30.0% | |
| AAATTTCACCCGAATAAGTT+GGG | - | chr5_3:29007633-29007652 | None:intergenic | 30.0% | |
| AAAATTTCACCCGAATAAGT+TGG | - | chr5_3:29007634-29007653 | None:intergenic | 30.0% | |
| ! | AACTTATTCGGGTGAAATTT+TGG | + | chr5_3:29007633-29007652 | Msa0807530:intron | 30.0% |
| CTACTTGACCAACAAAAAAA+GGG | + | chr5_3:29007664-29007683 | Msa0807530:intron | 30.0% | |
| TACTTGACCAACAAAAAAAG+GGG | + | chr5_3:29007665-29007684 | Msa0807530:intron | 30.0% | |
| ATTAACTCAAGTGCATGATT+GGG | + | chr5_3:29007831-29007850 | Msa0807530:intron | 30.0% | |
| !! | TTTTGGAGGGAAAAAAATAG+TGG | + | chr5_3:29008092-29008111 | Msa0807530:intron | 30.0% |
| TGTGATCATTGATATTGTAG+AGG | + | chr5_3:29008145-29008164 | Msa0807530:intron | 30.0% | |
| !! | TCAGGATTTTAATAAAGGTC+CGG | - | chr5_3:29008252-29008271 | None:intergenic | 30.0% |
| !! | GCACATCAGGATTTTAATAA+AGG | - | chr5_3:29008257-29008276 | None:intergenic | 30.0% |
| TGATAGTCAAATATTCACTG+AGG | - | chr5_3:29008316-29008335 | None:intergenic | 30.0% | |
| TAACTGCAATGTAACAGAAT+TGG | - | chr5_3:29008395-29008414 | None:intergenic | 30.0% | |
| ATTTATTCTATGTGGGACTT+TGG | + | chr5_3:29008453-29008472 | Msa0807530:intron | 30.0% | |
| TTTAGCATGTTCTCTTGAAT+TGG | - | chr5_3:29008643-29008662 | None:intergenic | 30.0% | |
| ! | CTTTTCAAATTTCTTCAGGT+TGG | + | chr5_3:29008766-29008785 | Msa0807530:intron | 30.0% |
| AATGAAAAGAGAGACAATGA+TGG | - | chr5_3:29008863-29008882 | None:intergenic | 30.0% | |
| ! | TGTCTCTCTTTTCATTTCTT+TGG | + | chr5_3:29008867-29008886 | Msa0807530:CDS | 30.0% |
| ! | CAATTTCAACAGTTGTCTTT+TGG | + | chr5_3:29008971-29008990 | Msa0807530:CDS | 30.0% |
| CTCAAGTATCTTTCTATACA+GGG | - | chr5_3:29009257-29009276 | None:intergenic | 30.0% | |
| ACTCAAGTATCTTTCTATAC+AGG | - | chr5_3:29009258-29009277 | None:intergenic | 30.0% | |
| ! | TTTTTGCATGTAATTGTACG+CGG | + | chr5_3:29009350-29009369 | Msa0807530:intron | 30.0% |
| ATTTCCTAACGTGCATTATT+AGG | - | chr5_3:29009575-29009594 | None:intergenic | 30.0% | |
| TGTGTCAGCATTCAAATAAT+TGG | - | chr5_3:29009613-29009632 | None:intergenic | 30.0% | |
| TTGAAAGAAAGAATTCCATC+AGG | - | chr5_3:29009671-29009690 | None:intergenic | 30.0% | |
| TCAATCTCAACTCAACAAAT+TGG | + | chr5_3:29009687-29009706 | Msa0807530:intron | 30.0% | |
| ! | TAGCTTACATGTTTTACACT+TGG | + | chr5_3:29009884-29009903 | Msa0807530:intron | 30.0% |
| AACAGAGAATCCATAATTTC+GGG | - | chr5_3:29009914-29009933 | None:intergenic | 30.0% | |
| GAACAGAGAATCCATAATTT+CGG | - | chr5_3:29009915-29009934 | None:intergenic | 30.0% | |
| !!! | GAAGGTTTTAGAAATAACAG+TGG | + | chr5_3:29010000-29010019 | Msa0807530:intron | 30.0% |
| TCACTAATCTTTCTATAAGC+TGG | - | chr5_3:29010192-29010211 | None:intergenic | 30.0% | |
| !! | AAAGGTTGGGTTTGTTAAAA+AGG | + | chr5_3:29010305-29010324 | Msa0807530:intron | 30.0% |
| CGAATGAACTATGACATATT+TGG | + | chr5_3:29010495-29010514 | Msa0807530:intron | 30.0% | |
| CAAAGACAATTGTCTGATTA+TGG | - | chr5_3:29010599-29010618 | None:intergenic | 30.0% | |
| CATAATCAGACAATTGTCTT+TGG | + | chr5_3:29010597-29010616 | Msa0807530:intron | 30.0% | |
| CGAAAAAACTTCCTCTTATA+TGG | - | chr5_3:29010986-29011005 | None:intergenic | 30.0% | |
| ! | ATTTTGTTCAACAATTCCAC+AGG | + | chr5_3:29011087-29011106 | Msa0807530:intron | 30.0% |
| ! | CAGCATCGAAAAAATTTCAA+AGG | + | chr5_3:29011207-29011226 | Msa0807530:intron | 30.0% |
| !! | ACATGGTTTACATTGTTTTG+AGG | - | chr5_3:29011886-29011905 | None:intergenic | 30.0% |
| AACAATGTAAACCATGTGAA+TGG | + | chr5_3:29011889-29011908 | Msa0807530:CDS | 30.0% | |
| TAAATAATTCATTTACCGGC+TGG | - | chr5_3:29012062-29012081 | None:intergenic | 30.0% | |
| TCAAACTGCAAATACATTGT+TGG | + | chr5_3:29012093-29012112 | Msa0807530:intron | 30.0% | |
| ATTGCGCATTTGATTAACTT+AGG | + | chr5_3:29012126-29012145 | Msa0807530:intron | 30.0% | |
| TGTAACATTTCAGAGACTAT+TGG | + | chr5_3:29012375-29012394 | Msa0807530:intron | 30.0% | |
| ATGTATCTTACGATGGAATT+CGG | + | chr5_3:29012456-29012475 | Msa0807530:intron | 30.0% | |
| TAAATAAGGAGTCCTTGTTA+GGG | - | chr5_3:29012547-29012566 | None:intergenic | 30.0% | |
| ATAAATAAGGAGTCCTTGTT+AGG | - | chr5_3:29012548-29012567 | None:intergenic | 30.0% | |
| GAAGTAAAATGTGTACTACT+TGG | - | chr5_3:29012762-29012781 | None:intergenic | 30.0% | |
| TTACTTCTTCTTTATGCAAG+TGG | + | chr5_3:29012775-29012794 | Msa0807530:intron | 30.0% | |
| TACTTCTTCTTTATGCAAGT+GGG | + | chr5_3:29012776-29012795 | Msa0807530:intron | 30.0% | |
| TAATGAATGGTCAATCTGAT+GGG | + | chr5_3:29012978-29012997 | Msa0807530:intron | 30.0% | |
| ! | GCACTACTGATAGAAAATTT+TGG | - | chr5_3:29013050-29013069 | None:intergenic | 30.0% |
| ! | CTTAAACGTAACGGAATTAA+TGG | - | chr5_3:29013169-29013188 | None:intergenic | 30.0% |
| AATTGCATGCTTAAACGTAA+CGG | - | chr5_3:29013178-29013197 | None:intergenic | 30.0% | |
| TTACGTTTAAGCATGCAATT+GGG | + | chr5_3:29013178-29013197 | Msa0807530:intron | 30.0% | |
| CAGGTAATTGGTAAAGAAAT+AGG | - | chr5_3:29013473-29013492 | None:intergenic | 30.0% | |
| TGGTACATATATGCATAAGT+TGG | + | chr5_3:29013514-29013533 | Msa0807530:intron | 30.0% | |
| ATTTATTCCGCGAGTAAAAT+TGG | - | chr5_3:29013545-29013564 | None:intergenic | 30.0% | |
| AAGTTCCGTTGTACAAATTA+TGG | + | chr5_3:29013720-29013739 | Msa0807530:intron | 30.0% | |
| AGTTCCGTTGTACAAATTAT+GGG | + | chr5_3:29013721-29013740 | Msa0807530:intron | 30.0% | |
| ! | CTCAATTTTCAGTTAGTTGG+AGG | - | chr5_3:29006943-29006962 | None:intergenic | 35.0% |
| ATCCGATTAGCAGTATAAGA+AGG | - | chr5_3:29007093-29007112 | None:intergenic | 35.0% | |
| ! | AGTGTAGTTTCTAGAAGCTT+CGG | - | chr5_3:29007142-29007161 | None:intergenic | 35.0% |
| ! | GCAATCACAATTTAAAGCGT+TGG | - | chr5_3:29007339-29007358 | None:intergenic | 35.0% |
| TAAACTTAGCTTAGCTTAGC+TGG | + | chr5_3:29007561-29007580 | Msa0807530:intron | 35.0% | |
| AAACTTAGCTTAGCTTAGCT+GGG | + | chr5_3:29007562-29007581 | Msa0807530:intron | 35.0% | |
| ACATTGCAACATGCAAGATT+CGG | + | chr5_3:29007589-29007608 | Msa0807530:intron | 35.0% | |
| !!! | CCTTTTTTTGTTGGTCAAGT+AGG | - | chr5_3:29007666-29007685 | None:intergenic | 35.0% |
| CCTACTTGACCAACAAAAAA+AGG | + | chr5_3:29007663-29007682 | Msa0807530:intron | 35.0% | |
| !!! | AATTGCACCCCTTTTTTTGT+TGG | - | chr5_3:29007675-29007694 | None:intergenic | 35.0% |
| GATTAACTCAAGTGCATGAT+TGG | + | chr5_3:29007830-29007849 | Msa0807530:intron | 35.0% | |
| TTAACTCAAGTGCATGATTG+GGG | + | chr5_3:29007832-29007851 | Msa0807530:intron | 35.0% | |
| CAATTCTGCATGTGATTAAC+CGG | + | chr5_3:29008023-29008042 | Msa0807530:intron | 35.0% | |
| AATTCTGCATGTGATTAACC+GGG | + | chr5_3:29008024-29008043 | Msa0807530:intron | 35.0% | |
| ! | TGTCCATGAAACATTTTGGA+GGG | + | chr5_3:29008079-29008098 | Msa0807530:intron | 35.0% |
| TTTCCCTCCAAAATGTTTCA+TGG | - | chr5_3:29008085-29008104 | None:intergenic | 35.0% | |
| TCTGGTGTTTATAAGCCATT+TGG | + | chr5_3:29008513-29008532 | Msa0807530:intron | 35.0% | |
| ! | CTCTCTTTTCATTTCTTTGG+TGG | + | chr5_3:29008870-29008889 | Msa0807530:CDS | 35.0% |
| ! | TCTTTTCATTTCTTTGGTGG+TGG | + | chr5_3:29008873-29008892 | Msa0807530:CDS | 35.0% |
| AATCGGACTATAATACATGC+TGG | + | chr5_3:29009149-29009168 | Msa0807530:intron | 35.0% | |
| ATCGGACTATAATACATGCT+GGG | + | chr5_3:29009150-29009169 | Msa0807530:intron | 35.0% | |
| CTATTTAGCATCAATACCTC+AGG | - | chr5_3:29009522-29009541 | None:intergenic | 35.0% | |
| !! | CTGAGGTATTGATGCTAAAT+AGG | + | chr5_3:29009520-29009539 | Msa0807530:intron | 35.0% |
| CGTGCATTATTAGGTGATTA+AGG | - | chr5_3:29009566-29009585 | None:intergenic | 35.0% | |
| ATCACCTAATAATGCACGTT+AGG | + | chr5_3:29009568-29009587 | Msa0807530:intron | 35.0% | |
| TGAATACCAGAATTACCTGA+TGG | + | chr5_3:29009653-29009672 | Msa0807530:intron | 35.0% | |
| AGAATTCCATCAGGTAATTC+TGG | - | chr5_3:29009662-29009681 | None:intergenic | 35.0% | |
| ATTTCTAACAGTCGTGATCT+TGG | + | chr5_3:29009729-29009748 | Msa0807530:intron | 35.0% | |
| ! | ACTTTTCTATGTTCATGCGA+AGG | + | chr5_3:29009982-29010001 | Msa0807530:intron | 35.0% |
| !! | TAACAGTGGATTAACAGTTG+AGG | + | chr5_3:29010014-29010033 | Msa0807530:intron | 35.0% |
| ! | TGAACATTTTGTCTAAGCGT+TGG | + | chr5_3:29010100-29010119 | Msa0807530:intron | 35.0% |
| TTGGTATGTCACTGTATTTG+TGG | + | chr5_3:29010119-29010138 | Msa0807530:intron | 35.0% | |
| CATTCAACAACTCATGATTG+TGG | - | chr5_3:29010149-29010168 | None:intergenic | 35.0% | |
| CACAATCATGAGTTGTTGAA+TGG | + | chr5_3:29010147-29010166 | Msa0807530:intron | 35.0% | |
| TGAGTTGTTGAATGGTACTT+TGG | + | chr5_3:29010155-29010174 | Msa0807530:intron | 35.0% | |
| TTGTTGAATGGTACTTTGGT+TGG | + | chr5_3:29010159-29010178 | Msa0807530:intron | 35.0% | |
| TGTTGAATGGTACTTTGGTT+GGG | + | chr5_3:29010160-29010179 | Msa0807530:intron | 35.0% | |
| GAATGTGTCACAAACATAAG+TGG | - | chr5_3:29010423-29010442 | None:intergenic | 35.0% | |
| !! | GGCAATTGTACTTGTTTTTC+CGG | - | chr5_3:29010548-29010567 | None:intergenic | 35.0% |
| ACACCTGAAAAGATCACAAA+CGG | - | chr5_3:29010570-29010589 | None:intergenic | 35.0% | |
| TGAGTAGATTTGAAAGTCTG+TGG | + | chr5_3:29010877-29010896 | Msa0807530:intron | 35.0% | |
| GAGTAGATTTGAAAGTCTGT+GGG | + | chr5_3:29010878-29010897 | Msa0807530:intron | 35.0% | |
| !!! | ATAAGAGGAAGTTTTTTCGC+TGG | + | chr5_3:29010987-29011006 | Msa0807530:intron | 35.0% |
| ! | CCTGACTTATTTCCGTTTTA+GGG | + | chr5_3:29011112-29011131 | Msa0807530:intron | 35.0% |
| CTTGAGAATCTGTTATTCTG+AGG | - | chr5_3:29011276-29011295 | None:intergenic | 35.0% | |
| GATTCTCAAGAAATGTCTAC+TGG | + | chr5_3:29011286-29011305 | Msa0807530:intron | 35.0% | |
| TTCAAGGTCATGAAATACTG+TGG | + | chr5_3:29011316-29011335 | Msa0807530:intron | 35.0% | |
| ACAGCAACAATATGATCACA+TGG | - | chr5_3:29011427-29011446 | None:intergenic | 35.0% | |
| AACCACTTGCATATCTTTCA+CGG | - | chr5_3:29011528-29011547 | None:intergenic | 35.0% | |
| TACAATGCCAGAATATCTTG+CGG | - | chr5_3:29011575-29011594 | None:intergenic | 35.0% | |
| CGCATTTGATTAACTTAGGA+AGG | + | chr5_3:29012130-29012149 | Msa0807530:intron | 35.0% | |
| ATTATGTGATAGACAGCTGA+CGG | - | chr5_3:29012241-29012260 | None:intergenic | 35.0% | |
| !!! | TGTTCGTTTTTTTCTGCAGT+CGG | + | chr5_3:29012336-29012355 | Msa0807530:intron | 35.0% |
| AACATTTCAGAGACTATTGG+AGG | + | chr5_3:29012378-29012397 | Msa0807530:intron | 35.0% | |
| !! | TTGCTTTAAAGCATCCACAA+TGG | + | chr5_3:29012516-29012535 | Msa0807530:intron | 35.0% |
| CCATATTAGTGTATTGCCAT+TGG | - | chr5_3:29012610-29012629 | None:intergenic | 35.0% | |
| CCAATGGCAATACACTAATA+TGG | + | chr5_3:29012607-29012626 | Msa0807530:intron | 35.0% | |
| AAGGAACGGGTAACTATATA+AGG | - | chr5_3:29012870-29012889 | None:intergenic | 35.0% | |
| TATAGTTACCCGTTCCTTAA+TGG | + | chr5_3:29012872-29012891 | Msa0807530:intron | 35.0% | |
| ATAGTTACCCGTTCCTTAAT+GGG | + | chr5_3:29012873-29012892 | Msa0807530:intron | 35.0% | |
| GAAAAATTGAGTCCCCATTA+AGG | - | chr5_3:29012889-29012908 | None:intergenic | 35.0% | |
| ! | CTCAATTTTTCTTCCTCCAA+TGG | + | chr5_3:29012898-29012917 | Msa0807530:intron | 35.0% |
| ! | AATTTTTCTTCCTCCAATGG+AGG | + | chr5_3:29012901-29012920 | Msa0807530:intron | 35.0% |
| ! | ATTTTTCTTCCTCCAATGGA+GGG | + | chr5_3:29012902-29012921 | Msa0807530:intron | 35.0% |
| ! | TTCATTAGAGCATCTCCAAT+GGG | - | chr5_3:29012965-29012984 | None:intergenic | 35.0% |
| ! | ATTCATTAGAGCATCTCCAA+TGG | - | chr5_3:29012966-29012985 | None:intergenic | 35.0% |
| ATTGGAGATGCTCTAATGAA+TGG | + | chr5_3:29012965-29012984 | Msa0807530:intron | 35.0% | |
| CTAATGAATGGTCAATCTGA+TGG | + | chr5_3:29012977-29012996 | Msa0807530:intron | 35.0% | |
| GTTACGTTTAAGCATGCAAT+TGG | + | chr5_3:29013177-29013196 | Msa0807530:intron | 35.0% | |
| TTAAGCATGCAATTGGGAAT+AGG | + | chr5_3:29013184-29013203 | Msa0807530:intron | 35.0% | |
| ACCAATGACAGTGATACATT+CGG | + | chr5_3:29013346-29013365 | Msa0807530:intron | 35.0% | |
| ATACATTCGGCTTCAATGTT+TGG | + | chr5_3:29013359-29013378 | Msa0807530:intron | 35.0% | |
| ! | TCGACCCATAATTTGTACAA+CGG | - | chr5_3:29013728-29013747 | None:intergenic | 35.0% |
| TGCTTATATTGTAATCTGCC+TGG | - | chr5_3:29013767-29013786 | None:intergenic | 35.0% | |
| GGCAGATTACAATATAAGCA+CGG | + | chr5_3:29013767-29013786 | Msa0807530:intron | 35.0% | |
| TTGAGTTCTTCGATCTGAAC+TGG | + | chr5_3:29006958-29006977 | Msa0807530:five_prime_UTR | 40.0% | |
| GAGATGGCAGAGAAAGAAAA+CGG | + | chr5_3:29006982-29007001 | Msa0807530:exon | 40.0% | |
| CTAGAAGCTTCGGGAATATA+AGG | - | chr5_3:29007132-29007151 | None:intergenic | 40.0% | |
| ! | GTGTAGTTTCTAGAAGCTTC+GGG | - | chr5_3:29007141-29007160 | None:intergenic | 40.0% |
| CATTGCAACATGCAAGATTC+GGG | + | chr5_3:29007590-29007609 | Msa0807530:intron | 40.0% | |
| ATTGCAACATGCAAGATTCG+GGG | + | chr5_3:29007591-29007610 | Msa0807530:intron | 40.0% | |
| ! | TAAGTTGGGAAATCCAGGAT+TGG | - | chr5_3:29007619-29007638 | None:intergenic | 40.0% |
| CCTGGATTTCCCAACTTATT+CGG | + | chr5_3:29007621-29007640 | Msa0807530:intron | 40.0% | |
| CTGGATTTCCCAACTTATTC+GGG | + | chr5_3:29007622-29007641 | Msa0807530:intron | 40.0% | |
| !! | AACAAAGTGTCGCACAAGTA+GGG | - | chr5_3:29007744-29007763 | None:intergenic | 40.0% |
| !! | TAACAAAGTGTCGCACAAGT+AGG | - | chr5_3:29007745-29007764 | None:intergenic | 40.0% |
| TAACTCAAGTGCATGATTGG+GGG | + | chr5_3:29007833-29007852 | Msa0807530:intron | 40.0% | |
| TAGCTCACTTGGTTGATCTA+AGG | + | chr5_3:29007861-29007880 | Msa0807530:intron | 40.0% | |
| AGCTCACTTGGTTGATCTAA+GGG | + | chr5_3:29007862-29007881 | Msa0807530:intron | 40.0% | |
| TCTAGTCAGGATTCAAACTC+TGG | - | chr5_3:29007897-29007916 | None:intergenic | 40.0% | |
| ! | CCAATTTTCCCTACACCTAT+GGG | - | chr5_3:29008058-29008077 | None:intergenic | 40.0% |
| CCATAGGTGTAGGGAAAATT+GGG | + | chr5_3:29008056-29008075 | Msa0807530:intron | 40.0% | |
| ! | TGGGTGTCCATGAAACATTT+TGG | + | chr5_3:29008075-29008094 | Msa0807530:intron | 40.0% |
| ! | GTGTCCATGAAACATTTTGG+AGG | + | chr5_3:29008078-29008097 | Msa0807530:intron | 40.0% |
| ATAGTGGTTGCAGTAACGAT+TGG | + | chr5_3:29008108-29008127 | Msa0807530:intron | 40.0% | |
| TTATGTCGCAGTCTAGATTG+TGG | + | chr5_3:29008219-29008238 | Msa0807530:intron | 40.0% | |
| GCAGTTAGTTAGTTACAGAG+TGG | + | chr5_3:29008408-29008427 | Msa0807530:intron | 40.0% | |
| TCATTTCGGTTTCATCCTTC+TGG | + | chr5_3:29008548-29008567 | Msa0807530:intron | 40.0% | |
| TTGCAGTAAACACAACCAGA+AGG | - | chr5_3:29008566-29008585 | None:intergenic | 40.0% | |
| ! | GAAGGAGAAGCATAAAGGTA+AGG | - | chr5_3:29008822-29008841 | None:intergenic | 40.0% |
| TACCTTTATGCTTCTCCTTC+TGG | + | chr5_3:29008822-29008841 | Msa0807530:CDS | 40.0% | |
| ! | AACCAGAAGGAGAAGCATAA+AGG | - | chr5_3:29008827-29008846 | None:intergenic | 40.0% |
| ! | CATTGATAGTTGCAACCAGA+AGG | - | chr5_3:29008840-29008859 | None:intergenic | 40.0% |
| TGCAGTTATCAGAATAGCCA+CGG | - | chr5_3:29009001-29009020 | None:intergenic | 40.0% | |
| GAAAAAGGTTGGAAAACAGC+TGG | - | chr5_3:29009029-29009048 | None:intergenic | 40.0% | |
| ! | ACACACACACACACACTTTT+CGG | - | chr5_3:29009285-29009304 | None:intergenic | 40.0% |
| TATGAAACATTGACACGCAC+AGG | + | chr5_3:29009397-29009416 | Msa0807530:intron | 40.0% | |
| !! | CTGTTTCTGTGTGTTTGTGT+TGG | - | chr5_3:29009430-29009449 | None:intergenic | 40.0% |
| CAACACAAACACACAGAAAC+AGG | + | chr5_3:29009428-29009447 | Msa0807530:intron | 40.0% | |
| TTAGCATCAATACCTCAGGT+TGG | - | chr5_3:29009518-29009537 | None:intergenic | 40.0% | |
| ! | AGGTGATTAAGGAGTTCTGA+GGG | - | chr5_3:29009555-29009574 | None:intergenic | 40.0% |
| TAGGTGATTAAGGAGTTCTG+AGG | - | chr5_3:29009556-29009575 | None:intergenic | 40.0% | |
| !! | ACTTGGTTTGCCCGAAATTA+TGG | + | chr5_3:29009901-29009920 | Msa0807530:intron | 40.0% |
| TATGGATTCTCTGTTCGCAA+AGG | + | chr5_3:29009919-29009938 | Msa0807530:intron | 40.0% | |
| ATGGATTCTCTGTTCGCAAA+GGG | + | chr5_3:29009920-29009939 | Msa0807530:intron | 40.0% | |
| AAGGGCAAGTGATAAGGAAT+CGG | + | chr5_3:29009938-29009957 | Msa0807530:intron | 40.0% | |
| CAAGTGATAAGGAATCGGTT+TGG | + | chr5_3:29009943-29009962 | Msa0807530:intron | 40.0% | |
| TCAAAAAATGCGACAAGGTG+TGG | + | chr5_3:29010051-29010070 | Msa0807530:intron | 40.0% | |
| CAAAAAATGCGACAAGGTGT+GGG | + | chr5_3:29010052-29010071 | Msa0807530:intron | 40.0% | |
| GTAAGACCATATCAGGTGTA+TGG | + | chr5_3:29010252-29010271 | Msa0807530:intron | 40.0% | |
| ATCGTTCCATACACCTGATA+TGG | - | chr5_3:29010261-29010280 | None:intergenic | 40.0% | |
| ATATCAGGTGTATGGAACGA+TGG | + | chr5_3:29010260-29010279 | Msa0807530:intron | 40.0% | |
| !! | CATAGCTGGTGGATTTCAAA+AGG | + | chr5_3:29010287-29010306 | Msa0807530:intron | 40.0% |
| !! | CTGGTGGATTTCAAAAGGTT+GGG | + | chr5_3:29010292-29010311 | Msa0807530:intron | 40.0% |
| AAGGACCTGTATAACCAGAT+CGG | + | chr5_3:29010324-29010343 | Msa0807530:intron | 40.0% | |
| GATGCAGTGAAATATCTTCG+AGG | + | chr5_3:29010381-29010400 | Msa0807530:intron | 40.0% | |
| TGTGACACATTCAACTGACA+CGG | + | chr5_3:29010431-29010450 | Msa0807530:intron | 40.0% | |
| TTGCCTTTGATGCAACTTAC+CGG | + | chr5_3:29010526-29010545 | Msa0807530:intron | 40.0% | |
| TTTCCGGTAAGTTGCATCAA+AGG | - | chr5_3:29010532-29010551 | None:intergenic | 40.0% | |
| CACCTGAAAAGATCACAAAC+GGG | - | chr5_3:29010569-29010588 | None:intergenic | 40.0% | |
| CAATTGCTAAGTGCGATGAA+TGG | + | chr5_3:29010672-29010691 | Msa0807530:intron | 40.0% | |
| TTTCATTGCAAGATCGCCAT+CGG | - | chr5_3:29010721-29010740 | None:intergenic | 40.0% | |
| ! | AGAAATGCATCGACCAACAT+TGG | + | chr5_3:29010801-29010820 | Msa0807530:intron | 40.0% |
| ! | GAAATGCATCGACCAACATT+GGG | + | chr5_3:29010802-29010821 | Msa0807530:intron | 40.0% |
| AAATTCAGGGATCCCAATGT+TGG | - | chr5_3:29010817-29010836 | None:intergenic | 40.0% | |
| TGTACGACAAACGACAAATG+TGG | + | chr5_3:29010952-29010971 | Msa0807530:intron | 40.0% | |
| GTACGACAAACGACAAATGT+GGG | + | chr5_3:29010953-29010972 | Msa0807530:intron | 40.0% | |
| ! | GCCTGACTTATTTCCGTTTT+AGG | + | chr5_3:29011111-29011130 | Msa0807530:intron | 40.0% |
| CCCTAAAACGGAAATAAGTC+AGG | - | chr5_3:29011115-29011134 | None:intergenic | 40.0% | |
| CTGACTGAATCTCCCTAAAA+CGG | - | chr5_3:29011127-29011146 | None:intergenic | 40.0% | |
| CGAATCAAATTACGGTTCTC+CGG | + | chr5_3:29011151-29011170 | Msa0807530:intron | 40.0% | |
| ! | CTCAAACTGGTCTGTAATAC+CGG | - | chr5_3:29011173-29011192 | None:intergenic | 40.0% |
| GTATTACAGACCAGTTTGAG+AGG | + | chr5_3:29011173-29011192 | Msa0807530:intron | 40.0% | |
| CTTCTCTATACCTCTCAAAC+TGG | - | chr5_3:29011186-29011205 | None:intergenic | 40.0% | |
| ! | ATCTGTTATTCTGAGGAGCA+TGG | - | chr5_3:29011269-29011288 | None:intergenic | 40.0% |
| !!! | GTCTACTGGCTCTATTTTCA+AGG | + | chr5_3:29011300-29011319 | Msa0807530:intron | 40.0% |
| AAGGTCATGAAATACTGTGG+TGG | + | chr5_3:29011319-29011338 | Msa0807530:intron | 40.0% | |
| TGACGATATTCCTGACAGTT+TGG | + | chr5_3:29011465-29011484 | Msa0807530:intron | 40.0% | |
| CTTGGTAAAACCAAACTGTC+AGG | - | chr5_3:29011478-29011497 | None:intergenic | 40.0% | |
| !!! | CTGACAGTTTGGTTTTACCA+AGG | + | chr5_3:29011476-29011495 | Msa0807530:intron | 40.0% |
| !!! | ACAGTTTGGTTTTACCAAGG+TGG | + | chr5_3:29011479-29011498 | Msa0807530:intron | 40.0% |
| ATCCGTGAAAGATATGCAAG+TGG | + | chr5_3:29011523-29011542 | Msa0807530:intron | 40.0% | |
| ATGCAAGTGGTTCCTTGTAT+TGG | + | chr5_3:29011536-29011555 | Msa0807530:intron | 40.0% | |
| TGCAAGTGGTTCCTTGTATT+GGG | + | chr5_3:29011537-29011556 | Msa0807530:intron | 40.0% | |
| ! | AACCGTGTCATTGACATGTT+GGG | + | chr5_3:29011646-29011665 | Msa0807530:intron | 40.0% |
| GTTAAAATCACTGCGATCAC+CGG | - | chr5_3:29011968-29011987 | None:intergenic | 40.0% | |
| ! | GGTGATCGCAGTGATTTTAA+CGG | + | chr5_3:29011967-29011986 | Msa0807530:intron | 40.0% |
| !! | GTGATCGCAGTGATTTTAAC+GGG | + | chr5_3:29011968-29011987 | Msa0807530:intron | 40.0% |
| GAAGGTTAATCTCTGTACGT+AGG | + | chr5_3:29012148-29012167 | Msa0807530:intron | 40.0% | |
| TAATCTCTGTACGTAGGTGA+TGG | + | chr5_3:29012154-29012173 | Msa0807530:intron | 40.0% | |
| AATCTCTGTACGTAGGTGAT+GGG | + | chr5_3:29012155-29012174 | Msa0807530:intron | 40.0% | |
| TTGTTAGGGAACTACCATTG+TGG | - | chr5_3:29012533-29012552 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr5_3:29012532-29012551 | Msa0807530:intron | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr5_3:29012589-29012608 | None:intergenic | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | + | chr5_3:29012591-29012610 | Msa0807530:intron | 40.0% | |
| TCTCTCTCCTGAGTAACTAA+CGG | - | chr5_3:29012843-29012862 | None:intergenic | 40.0% | |
| TTAGTTACTCAGGAGAGAGA+GGG | + | chr5_3:29012843-29012862 | Msa0807530:intron | 40.0% | |
| TAGTTACCCGTTCCTTAATG+GGG | + | chr5_3:29012874-29012893 | Msa0807530:intron | 40.0% | |
| ATTGAGTCCCCATTAAGGAA+CGG | - | chr5_3:29012884-29012903 | None:intergenic | 40.0% | |
| ! | TCATTAGAGCATCTCCAATG+GGG | - | chr5_3:29012964-29012983 | None:intergenic | 40.0% |
| TTTGGTTGCATCTGTCATTG+CGG | - | chr5_3:29013032-29013051 | None:intergenic | 40.0% | |
| ! | CCACTCTTGCTTTGTTAACT+AGG | - | chr5_3:29013101-29013120 | None:intergenic | 40.0% |
| CCTAGTTAACAAAGCAAGAG+TGG | + | chr5_3:29013098-29013117 | Msa0807530:intron | 40.0% | |
| GTTAACAAAGCAAGAGTGGT+CGG | + | chr5_3:29013102-29013121 | Msa0807530:intron | 40.0% | |
| CTTGAATCAGGGTTCATATC+AGG | + | chr5_3:29013126-29013145 | Msa0807530:intron | 40.0% | |
| ACTGCATATAACATCAGGAC+TGG | - | chr5_3:29013305-29013324 | None:intergenic | 40.0% | |
| TCTGCACTGCATATAACATC+AGG | - | chr5_3:29013310-29013329 | None:intergenic | 40.0% | |
| !! | GGAGTATCCAATTTTACTCG+CGG | + | chr5_3:29013535-29013554 | Msa0807530:intron | 40.0% |
| GTCGGTTGAAAATTCTTCGT+CGG | + | chr5_3:29013588-29013607 | Msa0807530:intron | 40.0% | |
| TTCCAACTGAAGGTTATCAG+TGG | + | chr5_3:29013673-29013692 | Msa0807530:intron | 40.0% | |
| ATCCACTGATAACCTTCAGT+TGG | - | chr5_3:29013678-29013697 | None:intergenic | 40.0% | |
| TACCTAATTCCGCACGAAAA+CGG | + | chr5_3:29013844-29013863 | Msa0807530:intron | 40.0% | |
| TTCGATCTGAACTGGAGAGA+TGG | + | chr5_3:29006966-29006985 | Msa0807530:exon | 45.0% | |
| GGGAATATAAGGAGAGAGTG+AGG | - | chr5_3:29007121-29007140 | None:intergenic | 45.0% | |
| AATGAGAAGGAGAGGTCGAA+GGG | - | chr5_3:29007199-29007218 | None:intergenic | 45.0% | |
| AAATGAGAAGGAGAGGTCGA+AGG | - | chr5_3:29007200-29007219 | None:intergenic | 45.0% | |
| TCGACCTCTCCTTCTCATTT+CGG | + | chr5_3:29007200-29007219 | Msa0807530:CDS | 45.0% | |
| CTCTCCTTCTCATTTCGGTT+CGG | + | chr5_3:29007205-29007224 | Msa0807530:intron | 45.0% | |
| GTAACCGAACCGAAATGAGA+AGG | - | chr5_3:29007212-29007231 | None:intergenic | 45.0% | |
| TTAGCTTAGCTTAGCTGGGA+AGG | + | chr5_3:29007566-29007585 | Msa0807530:intron | 45.0% | |
| ! | CCGAATAAGTTGGGAAATCC+AGG | - | chr5_3:29007624-29007643 | None:intergenic | 45.0% |
| TTGTTGGTCAAGTAGGCTAG+TGG | - | chr5_3:29007659-29007678 | None:intergenic | 45.0% | |
| !! | ACAAAGTGTCGCACAAGTAG+GGG | - | chr5_3:29007743-29007762 | None:intergenic | 45.0% |
| CCCATAGGTGTAGGGAAAAT+TGG | + | chr5_3:29008055-29008074 | Msa0807530:intron | 45.0% | |
| ! | CCCAATTTTCCCTACACCTA+TGG | - | chr5_3:29008059-29008078 | None:intergenic | 45.0% |
| GGTTGCAGTAACGATTGGAA+TGG | + | chr5_3:29008113-29008132 | Msa0807530:intron | 45.0% | |
| GGATCACAATCAATGAGCCT+TGG | + | chr5_3:29008166-29008185 | Msa0807530:intron | 45.0% | |
| CAATCAATGAGCCTTGGTTG+TGG | + | chr5_3:29008172-29008191 | Msa0807530:intron | 45.0% | |
| CTATAATGCGACCACAACCA+AGG | - | chr5_3:29008186-29008205 | None:intergenic | 45.0% | |
| TCTAGATTGTGGTTGTGGAC+CGG | + | chr5_3:29008230-29008249 | Msa0807530:intron | 45.0% | |
| ! | CAGAGTGGTTAGTTAGTCTG+TGG | + | chr5_3:29008423-29008442 | Msa0807530:intron | 45.0% |
| ! | ATGTCGTGAGGAGGTGTAAT+GGG | - | chr5_3:29008482-29008501 | None:intergenic | 45.0% |
| CTCCTCACGACATCACTATT+GGG | + | chr5_3:29008489-29008508 | Msa0807530:intron | 45.0% | |
| ATTGCTCTTGTTGCCTTGAC+AGG | + | chr5_3:29008793-29008812 | Msa0807530:CDS | 45.0% | |
| AAAGGTAAGGAGTCCTGTCA+AGG | - | chr5_3:29008809-29008828 | None:intergenic | 45.0% | |
| !! | TTCATTTCTTTGGTGGTGGC+CGG | + | chr5_3:29008877-29008896 | Msa0807530:CDS | 45.0% |
| GAAAAGAGCCAAGAATCCTC+CGG | - | chr5_3:29008899-29008918 | None:intergenic | 45.0% | |
| ! | AGTTGTCTTTTGGACAACCG+TGG | + | chr5_3:29008981-29009000 | Msa0807530:CDS | 45.0% |
| GTGGCTATTCTGATAACTGC+AGG | + | chr5_3:29009000-29009019 | Msa0807530:CDS | 45.0% | |
| ! | GTGTGTGTGTGTGTGTGTTT+TGG | + | chr5_3:29009289-29009308 | Msa0807530:intron | 45.0% |
| ACAGTCGTGATCTTGGCAAT+AGG | + | chr5_3:29009736-29009755 | Msa0807530:intron | 45.0% | |
| TTCGCAAAGGGCAAGTGATA+AGG | + | chr5_3:29009932-29009951 | Msa0807530:intron | 45.0% | |
| GCGAGTCAAAAAATGCGACA+AGG | + | chr5_3:29010046-29010065 | Msa0807530:intron | 45.0% | |
| ATTGGACGCAACATGAGAGT+AGG | + | chr5_3:29010228-29010247 | Msa0807530:intron | 45.0% | |
| TTGGACGCAACATGAGAGTA+GGG | + | chr5_3:29010229-29010248 | Msa0807530:intron | 45.0% | |
| AGTAGGGGTAAGACCATATC+AGG | + | chr5_3:29010245-29010264 | Msa0807530:intron | 45.0% | |
| !! | GCTGGTGGATTTCAAAAGGT+TGG | + | chr5_3:29010291-29010310 | Msa0807530:intron | 45.0% |
| ACCTGTATAACCAGATCGGT+AGG | + | chr5_3:29010328-29010347 | Msa0807530:intron | 45.0% | |
| ATTCAACTGACACGGAGAGA+AGG | + | chr5_3:29010439-29010458 | Msa0807530:intron | 45.0% | |
| ! | TGCCCGTTTGTGATCTTTTC+AGG | + | chr5_3:29010564-29010583 | Msa0807530:intron | 45.0% |
| CAGACAATTGTCTTTGGCAC+CGG | + | chr5_3:29010603-29010622 | Msa0807530:intron | 45.0% | |
| ! | AGTCTCGCTGGTTACTATAC+CGG | - | chr5_3:29010625-29010644 | None:intergenic | 45.0% |
| AGACTGAAGAGACGTATGTC+TGG | + | chr5_3:29010640-29010659 | Msa0807530:intron | 45.0% | |
| AGAGACGTATGTCTGGTTAC+TGG | + | chr5_3:29010647-29010666 | Msa0807530:intron | 45.0% | |
| ! | CCATCGGTTATCACTGACAA+CGG | - | chr5_3:29010705-29010724 | None:intergenic | 45.0% |
| TTGGGTTACAAGACAACAGC+TGG | + | chr5_3:29010919-29010938 | Msa0807530:intron | 45.0% | |
| ACAAGACAACAGCTGGATCA+AGG | + | chr5_3:29010926-29010945 | Msa0807530:intron | 45.0% | |
| GTCATGAAATACTGTGGTGG+TGG | + | chr5_3:29011322-29011341 | Msa0807530:intron | 45.0% | |
| !! | CAGGAGCACTTCAACTCAAT+TGG | - | chr5_3:29011379-29011398 | None:intergenic | 45.0% |
| ! | AGTTGAAGTGCTCCTGTTTG+AGG | + | chr5_3:29011383-29011402 | Msa0807530:intron | 45.0% |
| AAGTGACTCCATCCTCAAAC+AGG | - | chr5_3:29011398-29011417 | None:intergenic | 45.0% | |
| TGTTTGAGGATGGAGTCACT+TGG | + | chr5_3:29011397-29011416 | Msa0807530:intron | 45.0% | |
| GTTTGAGGATGGAGTCACTT+GGG | + | chr5_3:29011398-29011417 | Msa0807530:intron | 45.0% | |
| !! | TTCGCGAATTTTGACCACCT+TGG | - | chr5_3:29011496-29011515 | None:intergenic | 45.0% |
| AGGCTGTGAATCCCAATACA+AGG | - | chr5_3:29011551-29011570 | None:intergenic | 45.0% | |
| ATGACACGGTTGTACTCATC+AGG | - | chr5_3:29011637-29011656 | None:intergenic | 45.0% | |
| ! | CAACCGTGTCATTGACATGT+TGG | + | chr5_3:29011645-29011664 | Msa0807530:intron | 45.0% |
| CACCCAACATGTCAATGACA+CGG | - | chr5_3:29011651-29011670 | None:intergenic | 45.0% | |
| ! | CCTTTTGTTCTCACACCATG+GGG | - | chr5_3:29011769-29011788 | None:intergenic | 45.0% |
| ! | CCCTTTTGTTCTCACACCAT+GGG | - | chr5_3:29011770-29011789 | None:intergenic | 45.0% |
| CCCATGGTGTGAGAACAAAA+GGG | + | chr5_3:29011767-29011786 | Msa0807530:CDS | 45.0% | |
| ! | ACCCTTTTGTTCTCACACCA+TGG | - | chr5_3:29011771-29011790 | None:intergenic | 45.0% |
| ACATGACGTGACCATTCACA+TGG | - | chr5_3:29011903-29011922 | None:intergenic | 45.0% | |
| ATCTCGTCTTCAGTACCCAT+GGG | - | chr5_3:29011928-29011947 | None:intergenic | 45.0% | |
| TATCTCGTCTTCAGTACCCA+TGG | - | chr5_3:29011929-29011948 | None:intergenic | 45.0% | |
| ! | GGTACTGAAGACGAGATACT+GGG | + | chr5_3:29011931-29011950 | Msa0807530:CDS | 45.0% |
| TGTGCATGAAACACGGAATC+AGG | + | chr5_3:29012014-29012033 | Msa0807530:intron | 45.0% | |
| GAGGGACATGTATCTTACGA+TGG | + | chr5_3:29012449-29012468 | Msa0807530:intron | 45.0% | |
| CGATGGAATTCGGATTTGAG+TGG | + | chr5_3:29012466-29012485 | Msa0807530:intron | 45.0% | |
| CTCTCTCCTGAGTAACTAAC+GGG | - | chr5_3:29012842-29012861 | None:intergenic | 45.0% | |
| GTTAGTTACTCAGGAGAGAG+AGG | + | chr5_3:29012842-29012861 | Msa0807530:intron | 45.0% | |
| TTGAGTCCCCATTAAGGAAC+GGG | - | chr5_3:29012883-29012902 | None:intergenic | 45.0% | |
| GGAGTGGTCCTTGTTAAGTA+AGG | + | chr5_3:29012935-29012954 | Msa0807530:intron | 45.0% | |
| ! | ATTAGAGCATCTCCAATGGG+GGG | - | chr5_3:29012962-29012981 | None:intergenic | 45.0% |
| ! | CATTAGAGCATCTCCAATGG+GGG | - | chr5_3:29012963-29012982 | None:intergenic | 45.0% |
| !! | GTCAATCTGATGGGCTTCTT+GGG | + | chr5_3:29012987-29013006 | Msa0807530:intron | 45.0% |
| ACGGAATTAATGGTCGAGGT+GGG | - | chr5_3:29013159-29013178 | None:intergenic | 45.0% | |
| AACGGAATTAATGGTCGAGG+TGG | - | chr5_3:29013160-29013179 | None:intergenic | 45.0% | |
| ! | CGTAACGGAATTAATGGTCG+AGG | - | chr5_3:29013163-29013182 | None:intergenic | 45.0% |
| CATGCAATTGGGAATAGGCT+AGG | + | chr5_3:29013189-29013208 | Msa0807530:intron | 45.0% | |
| GCCGAATGTATCACTGTCAT+TGG | - | chr5_3:29013350-29013369 | None:intergenic | 45.0% | |
| ATACGCTACTATATGCACGG+CGG | - | chr5_3:29013443-29013462 | None:intergenic | 45.0% | |
| GCCATACGCTACTATATGCA+CGG | - | chr5_3:29013446-29013465 | None:intergenic | 45.0% | |
| ACCTTCAGTTGGAATGCAAG+CGG | - | chr5_3:29013667-29013686 | None:intergenic | 45.0% | |
| TATGGGTCGATCTCGTCAAA+TGG | + | chr5_3:29013738-29013757 | Msa0807530:intron | 45.0% | |
| !! | CTATTAAAAAATTATAAATA+AGG | - | chr5_3:29012561-29012580 | None:intergenic | 5.0% |
| CGAACCGAAATGAGAAGGAG+AGG | - | chr5_3:29007207-29007226 | None:intergenic | 50.0% | |
| AAGATTCGGGGTTCCAATCC+TGG | + | chr5_3:29007603-29007622 | Msa0807530:intron | 50.0% | |
| !! | CAAAGTGTCGCACAAGTAGG+GGG | - | chr5_3:29007742-29007761 | None:intergenic | 50.0% |
| TCAAGTGCATGATTGGGGGT+TGG | + | chr5_3:29007837-29007856 | Msa0807530:intron | 50.0% | |
| CAAGTGCATGATTGGGGGTT+GGG | + | chr5_3:29007838-29007857 | Msa0807530:intron | 50.0% | |
| CGCAGTCTAGATTGTGGTTG+TGG | + | chr5_3:29008225-29008244 | Msa0807530:intron | 50.0% | |
| GCTTCACGGTTAAGCACATC+AGG | - | chr5_3:29008270-29008289 | None:intergenic | 50.0% | |
| ! | GATGTCGTGAGGAGGTGTAA+TGG | - | chr5_3:29008483-29008502 | None:intergenic | 50.0% |
| CCAATAGTGATGTCGTGAGG+AGG | - | chr5_3:29008491-29008510 | None:intergenic | 50.0% | |
| CCTCCTCACGACATCACTAT+TGG | + | chr5_3:29008488-29008507 | Msa0807530:intron | 50.0% | |
| AGCCCAATAGTGATGTCGTG+AGG | - | chr5_3:29008494-29008513 | None:intergenic | 50.0% | |
| ACGACATCACTATTGGGCTC+TGG | + | chr5_3:29008495-29008514 | Msa0807530:intron | 50.0% | |
| ! | ATACACTGACTGTCCGACAC+TGG | + | chr5_3:29009472-29009491 | Msa0807530:intron | 50.0% |
| TGCGAGTGTCTAACCAGTGT+CGG | - | chr5_3:29009488-29009507 | None:intergenic | 50.0% | |
| !! | GCATCAATACCTCAGGTTGG+AGG | - | chr5_3:29009515-29009534 | None:intergenic | 50.0% |
| !! | AAGGAATCGGTTTGGAGACG+TGG | + | chr5_3:29009951-29009970 | Msa0807530:intron | 50.0% |
| TGGACGCAACATGAGAGTAG+GGG | + | chr5_3:29010230-29010249 | Msa0807530:intron | 50.0% | |
| GGAACGATGGCTAACATAGC+TGG | + | chr5_3:29010273-29010292 | Msa0807530:intron | 50.0% | |
| ACGATGGCTAACATAGCTGG+TGG | + | chr5_3:29010276-29010295 | Msa0807530:intron | 50.0% | |
| GCCTACCGATCTGGTTATAC+AGG | - | chr5_3:29010332-29010351 | None:intergenic | 50.0% | |
| ! | GAAGGCTCGAGCGTTTGTTT+TGG | + | chr5_3:29010457-29010476 | Msa0807530:intron | 50.0% |
| !!! | GAGCGTTTGTTTTGGTGCGA+TGG | + | chr5_3:29010465-29010484 | Msa0807530:intron | 50.0% |
| ATACGTCTCTTCAGTCTCGC+TGG | - | chr5_3:29010637-29010656 | None:intergenic | 50.0% | |
| CCGTTGTCAGTGATAACCGA+TGG | + | chr5_3:29010702-29010721 | Msa0807530:intron | 50.0% | |
| !! | ACAGACGATGGTGGGCATTA+GGG | - | chr5_3:29010764-29010783 | None:intergenic | 50.0% |
| ATGCATGCTGAGTGACGTTG+AGG | + | chr5_3:29010854-29010873 | Msa0807530:intron | 50.0% | |
| AAGAACCACTTCTCGATGCG+AGG | + | chr5_3:29011013-29011032 | Msa0807530:intron | 50.0% | |
| AGTGCACAAACTGTCCCATG+TGG | - | chr5_3:29011049-29011068 | None:intergenic | 50.0% | |
| GGAAATAAGTCAGGCACCTG+TGG | - | chr5_3:29011106-29011125 | None:intergenic | 50.0% | |
| ! | GAAGTGCTCCTGTTTGAGGA+TGG | + | chr5_3:29011387-29011406 | Msa0807530:intron | 50.0% |
| ATGCCAGAATATCTTGCGGC+AGG | - | chr5_3:29011571-29011590 | None:intergenic | 50.0% | |
| ! | CGTGTCATTGACATGTTGGG+TGG | + | chr5_3:29011649-29011668 | Msa0807530:intron | 50.0% |
| GAGTCGGGTCATTTGTAGCT+CGG | - | chr5_3:29011705-29011724 | None:intergenic | 50.0% | |
| CATGGGGATCCAGAATGTCA+GGG | - | chr5_3:29011753-29011772 | None:intergenic | 50.0% | |
| CCCCATGGTGTGAGAACAAA+AGG | + | chr5_3:29011766-29011785 | Msa0807530:CDS | 50.0% | |
| GGTGTGAGAACAAAAGGGTG+CGG | + | chr5_3:29011772-29011791 | Msa0807530:CDS | 50.0% | |
| !! | GGGTACTGAAGACGAGATAC+TGG | + | chr5_3:29011930-29011949 | Msa0807530:CDS | 50.0% |
| TGAAGACGAGATACTGGGAC+AGG | + | chr5_3:29011936-29011955 | Msa0807530:CDS | 50.0% | |
| ATACTGGGACAGGAGGATAC+CGG | + | chr5_3:29011946-29011965 | Msa0807530:CDS | 50.0% | |
| GGACAGGTGTGCATGAAACA+CGG | + | chr5_3:29012007-29012026 | Msa0807530:intron | 50.0% | |
| !! | CGGAATCAGGAGTATCGCAA+CGG | + | chr5_3:29012027-29012046 | Msa0807530:intron | 50.0% |
| !! | AGGTGATGGGCAGGCATTAA+TGG | + | chr5_3:29012168-29012187 | Msa0807530:intron | 50.0% |
| ! | GGCAGGCATTAATGGATCAG+CGG | + | chr5_3:29012176-29012195 | Msa0807530:intron | 50.0% |
| ! | GCAGGCATTAATGGATCAGC+GGG | + | chr5_3:29012177-29012196 | Msa0807530:intron | 50.0% |
| AGAGTCGTTGGCGTGAATCT+AGG | + | chr5_3:29012200-29012219 | Msa0807530:intron | 50.0% | |
| GAATCTAGGTAGCCAGGGTA+AGG | + | chr5_3:29012214-29012233 | Msa0807530:intron | 50.0% | |
| CTATGACTGCACGAACACAC+AGG | - | chr5_3:29012277-29012296 | None:intergenic | 50.0% | |
| !!! | TTTTTTCTGCAGTCGGCGAG+TGG | + | chr5_3:29012343-29012362 | Msa0807530:intron | 50.0% |
| CTCCAATGGAGGGTCCTTAA+CGG | + | chr5_3:29012912-29012931 | Msa0807530:intron | 50.0% | |
| TCCAATGGAGGGTCCTTAAC+GGG | + | chr5_3:29012913-29012932 | Msa0807530:intron | 50.0% | |
| TGGGGGGTCCTTACTTAACA+AGG | - | chr5_3:29012946-29012965 | None:intergenic | 50.0% | |
| GTTAAGTAAGGACCCCCCAT+TGG | + | chr5_3:29012947-29012966 | Msa0807530:intron | 50.0% | |
| !! | GGTCAATCTGATGGGCTTCT+TGG | + | chr5_3:29012986-29013005 | Msa0807530:intron | 50.0% |
| AGAGTGGTCGGACTTGAATC+AGG | + | chr5_3:29013114-29013133 | Msa0807530:intron | 50.0% | |
| GAGTGGTCGGACTTGAATCA+GGG | + | chr5_3:29013115-29013134 | Msa0807530:intron | 50.0% | |
| GGTATTGTTCTCTCTGGTCC+GGG | - | chr5_3:29013422-29013441 | None:intergenic | 50.0% | |
| CGGTATTGTTCTCTCTGGTC+CGG | - | chr5_3:29013423-29013442 | None:intergenic | 50.0% | |
| GCCGTGCATATAGTAGCGTA+TGG | + | chr5_3:29013442-29013461 | Msa0807530:intron | 50.0% | |
| ACCGCTTGCATTCCAACTGA+AGG | + | chr5_3:29013663-29013682 | Msa0807530:intron | 50.0% | |
| GATCTCGTCAAATGGCTACC+AGG | + | chr5_3:29013746-29013765 | Msa0807530:intron | 50.0% | |
| ! | CACCGTTTTCGTGCGGAATT+AGG | - | chr5_3:29013849-29013868 | None:intergenic | 50.0% |
| AATTCCGCACGAAAACGGTG+TGG | + | chr5_3:29013849-29013868 | Msa0807530:intron | 50.0% | |
| ! | GTTTCCACACCGTTTTCGTG+CGG | - | chr5_3:29013856-29013875 | None:intergenic | 50.0% |
| GACGAGACCAGCGAAGAACA+CGG | - | chr5_3:29007167-29007186 | None:intergenic | 55.0% | |
| ! | GTTCTTCGCTGGTCTCGTCA+AGG | + | chr5_3:29007168-29007187 | Msa0807530:CDS | 55.0% |
| TGTCGCAGCCCATAGGTGTA+GGG | + | chr5_3:29008047-29008066 | Msa0807530:intron | 55.0% | |
| !! | ATTTCTTTGGTGGTGGCCGG+AGG | + | chr5_3:29008880-29008899 | Msa0807530:CDS | 55.0% |
| TGCGACAAGGTGTGGGTGTA+TGG | + | chr5_3:29010059-29010078 | Msa0807530:intron | 55.0% | |
| GATTGCGTTGCCTACCGATC+TGG | - | chr5_3:29010341-29010360 | None:intergenic | 55.0% | |
| !! | CACAGACGATGGTGGGCATT+AGG | - | chr5_3:29010765-29010784 | None:intergenic | 55.0% |
| AATGCCACGCACACAGACGA+TGG | - | chr5_3:29010776-29010795 | None:intergenic | 55.0% | |
| TGGGCGACTGCCCATATAAG+AGG | + | chr5_3:29010972-29010991 | Msa0807530:intron | 55.0% | |
| !! | ACTGTGGTGGTGGTAGTGAG+TGG | + | chr5_3:29011332-29011351 | Msa0807530:intron | 55.0% |
| CAGCCTGCCGCAAGATATTC+TGG | + | chr5_3:29011565-29011584 | Msa0807530:intron | 55.0% | |
| GTGTAAACTCGTCGCTGAGC+TGG | + | chr5_3:29011600-29011619 | Msa0807530:intron | 55.0% | |
| !! | CGGTCTCTGAAACTGGAGTC+GGG | - | chr5_3:29011720-29011739 | None:intergenic | 55.0% |
| !! | CCGGTCTCTGAAACTGGAGT+CGG | - | chr5_3:29011721-29011740 | None:intergenic | 55.0% |
| CCGACTCCAGTTTCAGAGAC+CGG | + | chr5_3:29011718-29011737 | Msa0807530:intron | 55.0% | |
| !! | GATGTGCCGGTCTCTGAAAC+TGG | - | chr5_3:29011727-29011746 | None:intergenic | 55.0% |
| AATGTCAGGGTCGGATGTGC+CGG | - | chr5_3:29011740-29011759 | None:intergenic | 55.0% | |
| CACATCCGACCCTGACATTC+TGG | + | chr5_3:29011741-29011760 | Msa0807530:CDS | 55.0% | |
| GGGATCCAGAATGTCAGGGT+CGG | - | chr5_3:29011749-29011768 | None:intergenic | 55.0% | |
| CCATGGGGATCCAGAATGTC+AGG | - | chr5_3:29011754-29011773 | None:intergenic | 55.0% | |
| CCTGACATTCTGGATCCCCA+TGG | + | chr5_3:29011751-29011770 | Msa0807530:CDS | 55.0% | |
| ACGCAGACCTGCAGTGTATG+CGG | + | chr5_3:29011832-29011851 | Msa0807530:CDS | 55.0% | |
| TGCAGTGTATGCGGTGTGGT+CGG | + | chr5_3:29011841-29011860 | Msa0807530:CDS | 55.0% | |
| TGGTCACGTCATGTCTCCCA+TGG | + | chr5_3:29011909-29011928 | Msa0807530:CDS | 55.0% | |
| GGTCACGTCATGTCTCCCAT+GGG | + | chr5_3:29011910-29011929 | Msa0807530:CDS | 55.0% | |
| AGACGAGATACTGGGACAGG+AGG | + | chr5_3:29011939-29011958 | Msa0807530:CDS | 55.0% | |
| CATTCCCAATCCACGTGGAC+AGG | + | chr5_3:29011991-29012010 | Msa0807530:intron | 55.0% | |
| CACACCTGTCCACGTGGATT+GGG | - | chr5_3:29011998-29012017 | None:intergenic | 55.0% | |
| TTCATGCACACCTGTCCACG+TGG | - | chr5_3:29012004-29012023 | None:intergenic | 55.0% | |
| CAACGGCATTCATAGCCAGC+CGG | + | chr5_3:29012044-29012063 | Msa0807530:intron | 55.0% | |
| !! | TCTGTACGTAGGTGATGGGC+AGG | + | chr5_3:29012159-29012178 | Msa0807530:intron | 55.0% |
| TGGCGTGAATCTAGGTAGCC+AGG | + | chr5_3:29012208-29012227 | Msa0807530:intron | 55.0% | |
| GGCGTGAATCTAGGTAGCCA+GGG | + | chr5_3:29012209-29012228 | Msa0807530:intron | 55.0% | |
| GTGGGACCCGTTAGTTACTC+AGG | + | chr5_3:29012833-29012852 | Msa0807530:intron | 55.0% | |
| CGTTAAGGACCCTCCATTGG+AGG | - | chr5_3:29012914-29012933 | None:intergenic | 55.0% | |
| CCAATGGAGGGTCCTTAACG+GGG | + | chr5_3:29012914-29012933 | Msa0807530:intron | 55.0% | |
| ACAAGGACCACTCCCCGTTA+AGG | - | chr5_3:29012929-29012948 | None:intergenic | 55.0% | |
| GGTGGGGAGGCAATCTATTG+CGG | - | chr5_3:29013401-29013420 | None:intergenic | 55.0% | |
| CAATAGATTGCCTCCCCACC+CGG | + | chr5_3:29013401-29013420 | Msa0807530:intron | 55.0% | |
| TTGTTCTCTCTGGTCCGGGT+GGG | - | chr5_3:29013418-29013437 | None:intergenic | 55.0% | |
| ATTGTTCTCTCTGGTCCGGG+TGG | - | chr5_3:29013419-29013438 | None:intergenic | 55.0% | |
| CACGGCGGTATTGTTCTCTC+TGG | - | chr5_3:29013428-29013447 | None:intergenic | 55.0% | |
| ACACTCGCCGTGTTCTTCGC+TGG | + | chr5_3:29007157-29007176 | Msa0807530:CDS | 60.0% | |
| TGGGGGTTGGGTAGCTCACT+TGG | + | chr5_3:29007850-29007869 | Msa0807530:intron | 60.0% | |
| GTGTCGCAGCCCATAGGTGT+AGG | + | chr5_3:29008046-29008065 | Msa0807530:intron | 60.0% | |
| TCGCACACACCTCCAACCTG+AGG | + | chr5_3:29009503-29009522 | Msa0807530:intron | 60.0% | |
| CCACGCACACAGACGATGGT+GGG | - | chr5_3:29010772-29010791 | None:intergenic | 60.0% | |
| GAGTGCCTCGCATCGAGAAG+TGG | - | chr5_3:29011021-29011040 | None:intergenic | 60.0% | |
| ! | TCTCGATGCGAGGCACTCCA+CGG | + | chr5_3:29011023-29011042 | Msa0807530:intron | 60.0% |
| CAAACTGTCCCATGTGGCCG+TGG | - | chr5_3:29011043-29011062 | None:intergenic | 60.0% | |
| GACCTGCAGTGTATGCGGTG+TGG | + | chr5_3:29011837-29011856 | Msa0807530:CDS | 60.0% | |
| GACCACACCGCATACACTGC+AGG | - | chr5_3:29011842-29011861 | None:intergenic | 60.0% | |
| ACGGGCATTCCCAATCCACG+TGG | + | chr5_3:29011986-29012005 | Msa0807530:intron | 60.0% | |
| GCACACCTGTCCACGTGGAT+TGG | - | chr5_3:29011999-29012018 | None:intergenic | 60.0% | |
| TGGATCAGCGGGAGAGTCGT+TGG | + | chr5_3:29012188-29012207 | Msa0807530:intron | 60.0% | |
| ! | ACAGCTGACGGACCTTACCC+TGG | - | chr5_3:29012229-29012248 | None:intergenic | 60.0% |
| CCCCGTTAAGGACCCTCCAT+TGG | - | chr5_3:29012917-29012936 | None:intergenic | 60.0% | |
| TGTTCTCTCTGGTCCGGGTG+GGG | - | chr5_3:29013417-29013436 | None:intergenic | 60.0% | |
| ! | AACCGGGTGTCGCAGCCCAT+AGG | + | chr5_3:29008040-29008059 | Msa0807530:intron | 65.0% |
| ! | CACCTATGGGCTGCGACACC+CGG | - | chr5_3:29008045-29008064 | None:intergenic | 65.0% |
| ! | GGTGGTGGCCGGAGGATTCT+TGG | + | chr5_3:29008888-29008907 | Msa0807530:CDS | 65.0% |
| CCCACCATCGTCTGTGTGCG+TGG | + | chr5_3:29010769-29010788 | Msa0807530:intron | 65.0% | |
| GCCACGCACACAGACGATGG+TGG | - | chr5_3:29010773-29010792 | None:intergenic | 65.0% | |
| ! | GAGGCACTCCACGGCCACAT+GGG | + | chr5_3:29011032-29011051 | Msa0807530:intron | 65.0% |
| ACCAGGAGTCCCGCTGGGAA+TGG | - | chr5_3:29011800-29011819 | None:intergenic | 65.0% | |
| ATTCCCAGCGGGACTCCTGG+TGG | + | chr5_3:29011799-29011818 | Msa0807530:CDS | 65.0% | |
| CTGCAGTCGGCGAGTGGTTG+CGG | + | chr5_3:29012349-29012368 | Msa0807530:intron | 65.0% | |
| GGAGGGTCCTTAACGGGGAG+TGG | + | chr5_3:29012919-29012938 | Msa0807530:intron | 65.0% | |
| ! | CGAGGCACTCCACGGCCACA+TGG | + | chr5_3:29011031-29011050 | Msa0807530:intron | 70.0% |
| !! | GGGTGCGGTGCCATTCCCAG+CGG | + | chr5_3:29011787-29011806 | Msa0807530:CDS | 70.0% |
| !! | GGTGCGGTGCCATTCCCAGC+GGG | + | chr5_3:29011788-29011807 | Msa0807530:CDS | 70.0% |
| GCCATTCCCAGCGGGACTCC+TGG | + | chr5_3:29011796-29011815 | Msa0807530:CDS | 70.0% | |
| CGACCACCAGGAGTCCCGCT+GGG | - | chr5_3:29011805-29011824 | None:intergenic | 70.0% | |
| ACGACCACCAGGAGTCCCGC+TGG | - | chr5_3:29011806-29011825 | None:intergenic | 70.0% | |
| GCGGGACTCCTGGTGGTCGT+AGG | + | chr5_3:29011806-29011825 | Msa0807530:CDS | 70.0% | |
| TGCGTGCGCCTACGACCACC+AGG | - | chr5_3:29011817-29011836 | None:intergenic | 70.0% | |
| TCTCTCTGGTCCGGGTGGGG+AGG | - | chr5_3:29013414-29013433 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 29006907 | 29014028 | 29006907 | ID=Msa0807530;Name=Msa0807530 |
| chr5_3 | mRNA | 29006907 | 29014028 | 29006907 | ID=Msa0807530-mRNA-1;Parent=Msa0807530;Name=Msa0807530-mRNA-1;_AED=0.52;_eAED=0.52;_QI=78|0.33|0.25|0.5|0.33|0.5|4|0|243 |
| chr5_3 | exon | 29006907 | 29007221 | 29006907 | ID=Msa0807530-mRNA-1:exon:10175;Parent=Msa0807530-mRNA-1 |
| chr5_3 | exon | 29008784 | 29009021 | 29008784 | ID=Msa0807530-mRNA-1:exon:10176;Parent=Msa0807530-mRNA-1 |
| chr5_3 | exon | 29011734 | 29011967 | 29011734 | ID=Msa0807530-mRNA-1:exon:10177;Parent=Msa0807530-mRNA-1 |
| chr5_3 | exon | 29014006 | 29014028 | 29014006 | ID=Msa0807530-mRNA-1:exon:10178;Parent=Msa0807530-mRNA-1 |
| chr5_3 | five_prime_UTR | 29006907 | 29006984 | 29006907 | ID=Msa0807530-mRNA-1:five_prime_utr;Parent=Msa0807530-mRNA-1 |
| chr5_3 | CDS | 29006985 | 29007221 | 29006985 | ID=Msa0807530-mRNA-1:cds;Parent=Msa0807530-mRNA-1 |
| chr5_3 | CDS | 29008784 | 29009021 | 29008784 | ID=Msa0807530-mRNA-1:cds;Parent=Msa0807530-mRNA-1 |
| chr5_3 | CDS | 29011734 | 29011967 | 29011734 | ID=Msa0807530-mRNA-1:cds;Parent=Msa0807530-mRNA-1 |
| chr5_3 | CDS | 29014006 | 29014028 | 29014006 | ID=Msa0807530-mRNA-1:cds;Parent=Msa0807530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
