Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0748970 | Msa0814870 | 0.800834 | 1.196716e-48 | -8.615850e-47 |
| Msa0814870 | Msa0901020 | 0.854643 | 1.073879e-61 | -8.615850e-47 |
| Msa0814870 | Msa0966770 | 0.826698 | 2.352200e-54 | -8.615850e-47 |
| Msa0814870 | Msa0967280 | 0.811946 | 5.428386e-51 | -8.615850e-47 |
| Msa0814870 | Msa0980860 | -0.817399 | 3.364422e-52 | -8.615850e-47 |
| Msa0814870 | Msa1248300 | 0.812930 | 3.308653e-51 | -8.615850e-47 |
| Msa0286170 | Msa0814870 | 0.811944 | 5.434222e-51 | -8.615850e-47 |
| Msa0325070 | Msa0814870 | 0.805993 | 1.020745e-49 | -8.615850e-47 |
| Msa0331450 | Msa0814870 | 0.812595 | 3.918073e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAACGTTGTGCAATTTC+AGG | 0.179329 | 5_3:-47401813 | None:intergenic |
| ATTATAAGATTCAAGCAAAA+TGG | 0.257456 | 5_3:-47402144 | None:intergenic |
| TCAAATCCAATCAATGATTA+TGG | 0.264350 | 5_3:-47401737 | None:intergenic |
| TCCCCAGTTGAGTTGGGATT+GGG | 0.310114 | 5_3:+47397772 | Msa0814870:CDS |
| CGCCCCAATCCCAACTCAAC+TGG | 0.318204 | 5_3:-47397775 | None:intergenic |
| AGTTGAGATATCACAGCTTT+GGG | 0.323174 | 5_3:-47397557 | None:intergenic |
| TTGAGTTCAGGGAACATATA+TGG | 0.335143 | 5_3:-47402026 | None:intergenic |
| CCAACTCAACTGGGGAGATA+TGG | 0.342090 | 5_3:-47397765 | None:intergenic |
| CTCCCCAGTTGAGTTGGGAT+TGG | 0.374601 | 5_3:+47397771 | Msa0814870:CDS |
| TCACTTCCATAATCATTGAT+TGG | 0.374803 | 5_3:+47401731 | Msa0814870:three_prime_UTR |
| GAGTTGAGATATCACAGCTT+TGG | 0.407100 | 5_3:-47397558 | None:intergenic |
| AGCCGGTCAAATTTGTTGTC+AGG | 0.425284 | 5_3:-47397488 | None:intergenic |
| CTTCTTGTCATCTGTGGCGT+TGG | 0.425773 | 5_3:+47397910 | Msa0814870:CDS |
| CTCAATGGTCTGCAAACTGC+AGG | 0.435004 | 5_3:+47399026 | Msa0814870:CDS |
| ATGGTTTGGTCTTCGATCAA+TGG | 0.438912 | 5_3:-47397746 | None:intergenic |
| TATATACCAGTAGATGTGTT+TGG | 0.447958 | 5_3:-47399003 | None:intergenic |
| CTGAGCAGTAGCAGCAGCAT+CGG | 0.449287 | 5_3:-47398091 | None:intergenic |
| CATATCTCCCCAGTTGAGTT+GGG | 0.451387 | 5_3:+47397766 | Msa0814870:CDS |
| CCATATCTCCCCAGTTGAGT+TGG | 0.455461 | 5_3:+47397765 | Msa0814870:CDS |
| TTATAAGATTCAAGCAAAAT+GGG | 0.467904 | 5_3:-47402143 | None:intergenic |
| CGATGCTGCTGCTACTGCTC+AGG | 0.468612 | 5_3:+47398092 | Msa0814870:CDS |
| CTCAGCGACGACGAAGCATA+TGG | 0.473073 | 5_3:+47397578 | Msa0814870:CDS |
| ATTAACGTTGTGCAATTTCA+GGG | 0.474122 | 5_3:-47401812 | None:intergenic |
| CTGGCGCGAAGTGTAGTAGA+TGG | 0.477084 | 5_3:-47397935 | None:intergenic |
| TCTTCGATCAATGGCGGCGG+TGG | 0.477868 | 5_3:-47397737 | None:intergenic |
| AGTAGCAGCAGCATCGGCAG+TGG | 0.482176 | 5_3:-47398085 | None:intergenic |
| TCAACTGGGGAGATATGGTT+TGG | 0.489202 | 5_3:-47397760 | None:intergenic |
| CACTTCGCAAGGAAAATCTC+TGG | 0.509761 | 5_3:+47397530 | Msa0814870:CDS |
| GTTGTTCCAAACACATCTAC+TGG | 0.514003 | 5_3:+47398997 | Msa0814870:CDS |
| GCCCCAATCCCAACTCAACT+GGG | 0.515923 | 5_3:-47397774 | None:intergenic |
| ATCTACTGGTATATACTCAA+TGG | 0.535553 | 5_3:+47399011 | Msa0814870:CDS |
| CCCCAGTTGAGTTGGGATTG+GGG | 0.536417 | 5_3:+47397773 | Msa0814870:CDS |
| AATCATTGATTGGATTTGAG+TGG | 0.538294 | 5_3:+47401741 | Msa0814870:three_prime_UTR |
| TTGAGGGAGGCGAGAAAACT+CGG | 0.542551 | 5_3:-47397612 | None:intergenic |
| ATGCGGTTTAGCTCCGCTTG+AGG | 0.543725 | 5_3:-47397629 | None:intergenic |
| GTTGATAAAATAGTTGATGA+AGG | 0.545953 | 5_3:+47401690 | Msa0814870:three_prime_UTR |
| GTAGCAGCAGCATCGGCAGT+GGG | 0.554617 | 5_3:-47398084 | None:intergenic |
| TGCCTGACAACAAATTTGAC+CGG | 0.579457 | 5_3:+47397486 | Msa0814870:CDS |
| TGGTCTTCGATCAATGGCGG+CGG | 0.598249 | 5_3:-47397740 | None:intergenic |
| CAAAACGTGATGCTGACTAA+CGG | 0.600951 | 5_3:-47401861 | None:intergenic |
| CTACCTCGGCTTCGACGATG+CGG | 0.606288 | 5_3:-47397646 | None:intergenic |
| TAACGTTGTGCAATTTCAGG+GGG | 0.607646 | 5_3:-47401810 | None:intergenic |
| GTAGCTCTTCTTGTCATCTG+TGG | 0.617615 | 5_3:+47397904 | Msa0814870:intron |
| TTAACGTTGTGCAATTTCAG+GGG | 0.621812 | 5_3:-47401811 | None:intergenic |
| CGAAGCATATGGCATCATTG+AGG | 0.628922 | 5_3:+47397589 | Msa0814870:CDS |
| ACTGCATTATTACTAAATCG+TGG | 0.630898 | 5_3:+47401971 | Msa0814870:three_prime_UTR |
| GAGATATCACAGCTTTGGGG+AGG | 0.631748 | 5_3:-47397553 | None:intergenic |
| GGTTTAGCTCCGCTTGAGGG+AGG | 0.632521 | 5_3:-47397625 | None:intergenic |
| CCCCAATCCCAACTCAACTG+GGG | 0.632775 | 5_3:-47397773 | None:intergenic |
| AAACCGCATCGTCGAAGCCG+AGG | 0.632848 | 5_3:+47397643 | Msa0814870:CDS |
| TCAATGGTCTGCAAACTGCA+GGG | 0.636977 | 5_3:+47399027 | Msa0814870:CDS |
| GTTGAGATATCACAGCTTTG+GGG | 0.645453 | 5_3:-47397556 | None:intergenic |
| GTTTGGTCTTCGATCAATGG+CGG | 0.652118 | 5_3:-47397743 | None:intergenic |
| GATGAAGGAAAGATTCACCA+AGG | 0.683291 | 5_3:+47401705 | Msa0814870:three_prime_UTR |
| CAGTTGAGTTGGGATTGGGG+CGG | 0.696874 | 5_3:+47397776 | Msa0814870:CDS |
| GATTATGGAAGTGACAACCT+TGG | 0.701983 | 5_3:-47401722 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATATCTATCAAA+GGG | - | chr5_3:47398123-47398142 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATCTATCAA+AGG | - | chr5_3:47398124-47398143 | None:intergenic | 10.0% |
| !!! | ATTAAAGTCTTTTTTTAAAA+TGG | + | chr5_3:47398217-47398236 | Msa0814870:intron | 10.0% |
| !!! | TTAAAGTCTTTTTTTAAAAT+GGG | + | chr5_3:47398218-47398237 | Msa0814870:intron | 10.0% |
| !! | ACGAAAAATAATAAAAAAAA+AGG | - | chr5_3:47398698-47398717 | None:intergenic | 10.0% |
| !! | TCATTATATTATATAGAAAA+TGG | + | chr5_3:47399361-47399380 | Msa0814870:intron | 10.0% |
| !! | CATTATATTATATAGAAAAT+GGG | + | chr5_3:47399362-47399381 | Msa0814870:intron | 10.0% |
| !! | AAATTATACAAAGAAAATAT+AGG | - | chr5_3:47399655-47399674 | None:intergenic | 10.0% |
| !! | TTATAAAAGAATAAATGAAA+TGG | + | chr5_3:47400890-47400909 | Msa0814870:intron | 10.0% |
| !!! | AACTCAATATATTTTTATTA+AGG | + | chr5_3:47402042-47402061 | Msa0814870:three_prime_UTR | 10.0% |
| !! | GAAACTTAAATAAAAATATA+TGG | - | chr5_3:47402084-47402103 | None:intergenic | 10.0% |
| !!! | AATTAAATGTCATTTTGAAA+TGG | + | chr5_3:47399496-47399515 | Msa0814870:intron | 15.0% |
| !!! | AAGTTTTTTTTTTTTTGACA+AGG | - | chr5_3:47401289-47401308 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAACTTAGTGA+TGG | + | chr5_3:47401294-47401313 | Msa0814870:intron | 15.0% |
| !! | ATACTAATTTAACAGTTATA+AGG | - | chr5_3:47401505-47401524 | None:intergenic | 15.0% |
| !! | TTATAACTGTTAAATTAGTA+TGG | + | chr5_3:47401504-47401523 | Msa0814870:intron | 15.0% |
| !!! | TTTATTTTTTGCATTTTGTA+TGG | + | chr5_3:47401588-47401607 | Msa0814870:intron | 15.0% |
| !!! | TTATTTTTTGCATTTTGTAT+GGG | + | chr5_3:47401589-47401608 | Msa0814870:intron | 15.0% |
| !! | ATAAAAATATATTGAGTTCA+GGG | - | chr5_3:47402040-47402059 | None:intergenic | 15.0% |
| !! | AATAAAAATATATTGAGTTC+AGG | - | chr5_3:47402041-47402060 | None:intergenic | 15.0% |
| !!! | ATTTTTATTAAGGTTTTTGA+TGG | + | chr5_3:47402052-47402071 | Msa0814870:three_prime_UTR | 15.0% |
| !!! | TCTTTTCATATATGCATTTT+TGG | + | chr5_3:47398145-47398164 | Msa0814870:intron | 20.0% |
| !! | TTCTTTGAATTATTGAGATT+TGG | + | chr5_3:47398456-47398475 | Msa0814870:intron | 20.0% |
| !! | TCTTTGAATTATTGAGATTT+GGG | + | chr5_3:47398457-47398476 | Msa0814870:intron | 20.0% |
| !!! | TGAAGATTGATTTGAATAAT+TGG | - | chr5_3:47398897-47398916 | None:intergenic | 20.0% |
| !! | TGATAGAAATGAATGAAAAA+AGG | + | chr5_3:47399294-47399313 | Msa0814870:intron | 20.0% |
| !! | AAACTTGTAAGTATTCATAT+TGG | + | chr5_3:47399321-47399340 | Msa0814870:intron | 20.0% |
| !! | AACTTGTAAGTATTCATATT+GGG | + | chr5_3:47399322-47399341 | Msa0814870:intron | 20.0% |
| !!! | AGACTTGTTCATTTTTTTTA+GGG | - | chr5_3:47399410-47399429 | None:intergenic | 20.0% |
| !!! | TAGACTTGTTCATTTTTTTT+AGG | - | chr5_3:47399411-47399430 | None:intergenic | 20.0% |
| !! | AAAAAAAATGAACAAGTCTA+AGG | + | chr5_3:47399411-47399430 | Msa0814870:intron | 20.0% |
| !! | GTATTCATGTAAATTGAAAT+TGG | - | chr5_3:47400202-47400221 | None:intergenic | 20.0% |
| !! | AAAATCAAAGAATACTCAAA+GGG | + | chr5_3:47400383-47400402 | Msa0814870:intron | 20.0% |
| !! | TGGAAATTAATAAAATGACT+TGG | + | chr5_3:47400910-47400929 | Msa0814870:intron | 20.0% |
| !!! | TTAATAAAATGACTTGGAAA+AGG | + | chr5_3:47400916-47400935 | Msa0814870:intron | 20.0% |
| !!! | AAATAAGATAATGCACTTTT+GGG | - | chr5_3:47401081-47401100 | None:intergenic | 20.0% |
| !!! | TAAATAAGATAATGCACTTT+TGG | - | chr5_3:47401082-47401101 | None:intergenic | 20.0% |
| !!! | ATTGATAATATCTATTGTGA+AGG | + | chr5_3:47401109-47401128 | Msa0814870:intron | 20.0% |
| !!! | TTGATAATATCTATTGTGAA+GGG | + | chr5_3:47401110-47401129 | Msa0814870:intron | 20.0% |
| !! | GGAAAATAATCACATTATAA+AGG | + | chr5_3:47401131-47401150 | Msa0814870:intron | 20.0% |
| !! | AGAGAAAATATATAGAGTAA+CGG | - | chr5_3:47401256-47401275 | None:intergenic | 20.0% |
| !!! | ATATAGATTTTCAAGTTCAT+GGG | - | chr5_3:47401927-47401946 | None:intergenic | 20.0% |
| !!! | AATATAGATTTTCAAGTTCA+TGG | - | chr5_3:47401928-47401947 | None:intergenic | 20.0% |
| !! | TTATAAGATTCAAGCAAAAT+GGG | - | chr5_3:47402146-47402165 | None:intergenic | 20.0% |
| !! | ATTATAAGATTCAAGCAAAA+TGG | - | chr5_3:47402147-47402166 | None:intergenic | 20.0% |
| ! | AAAGAAAGAAAAAAAGGAAC+AGG | - | chr5_3:47397875-47397894 | None:intergenic | 25.0% |
| ! | ATTGCGAAAGAAAGAAAAAA+AGG | - | chr5_3:47397881-47397900 | None:intergenic | 25.0% |
| ! | GAATAAATTGTAGTTTAACC+TGG | - | chr5_3:47397957-47397976 | None:intergenic | 25.0% |
| !! | TTAGATAATGATCTTTTGTC+AGG | - | chr5_3:47398051-47398070 | None:intergenic | 25.0% |
| !! | CTGTTTGATGATATGAATTT+AGG | + | chr5_3:47398344-47398363 | Msa0814870:intron | 25.0% |
| !! | TTCTCTATAATTGCTTTGTT+AGG | + | chr5_3:47398744-47398763 | Msa0814870:intron | 25.0% |
| ! | GTATCAATATAGACAACAAA+AGG | - | chr5_3:47398945-47398964 | None:intergenic | 25.0% |
| ! | TATATTGATACTCAAACTTC+AGG | + | chr5_3:47398954-47398973 | Msa0814870:intron | 25.0% |
| ! | TCTATATGCATGTTGTATAT+TGG | - | chr5_3:47399169-47399188 | None:intergenic | 25.0% |
| !!! | GACTTGTTCATTTTTTTTAG+GGG | - | chr5_3:47399409-47399428 | None:intergenic | 25.0% |
| ! | TTGAAATGGAATTTCATCTT+TGG | + | chr5_3:47399510-47399529 | Msa0814870:intron | 25.0% |
| !!! | CTTTGTCAATTTTCTGAAAA+AGG | + | chr5_3:47399563-47399582 | Msa0814870:intron | 25.0% |
| ! | TAATTACCTAGGATAGAAAA+TGG | - | chr5_3:47399733-47399752 | None:intergenic | 25.0% |
| ! | AGACAAAAACATAATTACCT+AGG | - | chr5_3:47399744-47399763 | None:intergenic | 25.0% |
| ! | TTTCATATCTAATAGATCGT+TGG | + | chr5_3:47400006-47400025 | Msa0814870:intron | 25.0% |
| ! | AATCTGTTTAATATGAAACC+TGG | + | chr5_3:47400342-47400361 | Msa0814870:intron | 25.0% |
| !!! | TTTGATTTTGTTGTCTCAAA+TGG | - | chr5_3:47400372-47400391 | None:intergenic | 25.0% |
| ! | CAAAATCAAAGAATACTCAA+AGG | + | chr5_3:47400382-47400401 | Msa0814870:intron | 25.0% |
| !!! | TTTGTTGACTTTGTTAATAG+AGG | + | chr5_3:47400998-47401017 | Msa0814870:intron | 25.0% |
| !!! | TTGTTGACTTTGTTAATAGA+GGG | + | chr5_3:47400999-47401018 | Msa0814870:intron | 25.0% |
| !!! | CTTTTTAAAAACCAGCATTT+TGG | - | chr5_3:47401026-47401045 | None:intergenic | 25.0% |
| !!! | CAAAATGCTGGTTTTTAAAA+AGG | + | chr5_3:47401024-47401043 | Msa0814870:intron | 25.0% |
| !! | AGTGTTTTATCTCTATTTCA+CGG | + | chr5_3:47401159-47401178 | Msa0814870:intron | 25.0% |
| ! | GTAATTATATTCTTTGCACT+TGG | + | chr5_3:47401224-47401243 | Msa0814870:intron | 25.0% |
| !! | TCTATATATTTTCTCTTCGT+TGG | + | chr5_3:47401260-47401279 | Msa0814870:intron | 25.0% |
| !! | CTATATATTTTCTCTTCGTT+GGG | + | chr5_3:47401261-47401280 | Msa0814870:intron | 25.0% |
| ! | GGATTTGCAAAATTCAAAAA+AGG | - | chr5_3:47401366-47401385 | None:intergenic | 25.0% |
| ! | AAAAAAAATCTCCAGCTTAA+AGG | - | chr5_3:47401387-47401406 | None:intergenic | 25.0% |
| ! | AAGTAGCATACACAAAAAAT+AGG | - | chr5_3:47401472-47401491 | None:intergenic | 25.0% |
| ! | TGTTAAATTAGTATGGAAAG+TGG | + | chr5_3:47401511-47401530 | Msa0814870:intron | 25.0% |
| !!! | GTTGATAAAATAGTTGATGA+AGG | + | chr5_3:47401690-47401709 | Msa0814870:three_prime_UTR | 25.0% |
| ! | TCAAATCCAATCAATGATTA+TGG | - | chr5_3:47401740-47401759 | None:intergenic | 25.0% |
| !!! | ATTGATGTTTTGTTAATCTC+AGG | - | chr5_3:47401788-47401807 | None:intergenic | 25.0% |
| !!! | TAATAATGCAGTCACTTTTA+AGG | - | chr5_3:47401963-47401982 | None:intergenic | 25.0% |
| AGCTAATATGATATCTACCT+CGG | - | chr5_3:47397663-47397682 | None:intergenic | 30.0% | |
| TTATCTGTTTGTCTTTCTTC+GGG | - | chr5_3:47397715-47397734 | None:intergenic | 30.0% | |
| GTTATCTGTTTGTCTTTCTT+CGG | - | chr5_3:47397716-47397735 | None:intergenic | 30.0% | |
| TAAAACAACACTGTTAGTTG+AGG | - | chr5_3:47398013-47398032 | None:intergenic | 30.0% | |
| !!! | TTCCCCCTCTTTTTTTAAAA+GGG | - | chr5_3:47398172-47398191 | None:intergenic | 30.0% |
| !!! | TTTCCCCCTCTTTTTTTAAA+AGG | - | chr5_3:47398173-47398192 | None:intergenic | 30.0% |
| ! | TTGCTTTGTTGTGAAAAGTT+GGG | + | chr5_3:47398241-47398260 | Msa0814870:intron | 30.0% |
| !!! | AAAAGTTGGGGATTTTTTAG+AGG | + | chr5_3:47398254-47398273 | Msa0814870:intron | 30.0% |
| AATTTAGGAGTTTAGTGACA+TGG | + | chr5_3:47398359-47398378 | Msa0814870:intron | 30.0% | |
| ! | AATGCTATGTTGGATTTGTT+GGG | + | chr5_3:47398382-47398401 | Msa0814870:intron | 30.0% |
| !! | TGAAGAGGATTTAAGTTTTG+TGG | + | chr5_3:47398533-47398552 | Msa0814870:intron | 30.0% |
| ! | CGCTTATTGGTGTTTATATT+AGG | + | chr5_3:47398567-47398586 | Msa0814870:intron | 30.0% |
| TAAAGTTTGTGGCTTCAATA+AGG | - | chr5_3:47398837-47398856 | None:intergenic | 30.0% | |
| !! | AAGAACTCTTCTAAAGTTTG+TGG | - | chr5_3:47398848-47398867 | None:intergenic | 30.0% |
| TATATACCAGTAGATGTGTT+TGG | - | chr5_3:47399006-47399025 | None:intergenic | 30.0% | |
| ATCTACTGGTATATACTCAA+TGG | + | chr5_3:47399011-47399030 | Msa0814870:CDS | 30.0% | |
| ! | TACATACCAGTAGATCTTTT+TGG | - | chr5_3:47399078-47399097 | None:intergenic | 30.0% |
| ATATGCATGTTGTATATTGG+AGG | - | chr5_3:47399166-47399185 | None:intergenic | 30.0% | |
| TTGTAAGTATTCATATTGGG+AGG | + | chr5_3:47399325-47399344 | Msa0814870:intron | 30.0% | |
| AGTCTAAGGAAGAAAGAATA+TGG | + | chr5_3:47399425-47399444 | Msa0814870:intron | 30.0% | |
| AGGAAGAAAGAATATGGTTA+TGG | + | chr5_3:47399431-47399450 | Msa0814870:intron | 30.0% | |
| AAGGCCTAGAATAATTTAGA+CGG | + | chr5_3:47399582-47399601 | Msa0814870:intron | 30.0% | |
| AAAGCCGTCTAAATTATTCT+AGG | - | chr5_3:47399589-47399608 | None:intergenic | 30.0% | |
| AGAAAATATAGGAGAGAAAG+AGG | - | chr5_3:47399644-47399663 | None:intergenic | 30.0% | |
| ! | AGAAAACCATTTTCTATCCT+AGG | + | chr5_3:47399724-47399743 | Msa0814870:intron | 30.0% |
| ! | GTTATGGTAATTTGTGAAAG+TGG | + | chr5_3:47399826-47399845 | Msa0814870:intron | 30.0% |
| AATTTGTGAAAGTGGTTGTT+TGG | + | chr5_3:47399834-47399853 | Msa0814870:intron | 30.0% | |
| ATTAGATATGAAAGAACCCA+GGG | - | chr5_3:47399999-47400018 | None:intergenic | 30.0% | |
| TATTAGATATGAAAGAACCC+AGG | - | chr5_3:47400000-47400019 | None:intergenic | 30.0% | |
| !!! | CATTAGGGAATTTTTTGCTT+TGG | - | chr5_3:47400227-47400246 | None:intergenic | 30.0% |
| CAAAAAATTCCCTAATGTGA+GGG | + | chr5_3:47400230-47400249 | Msa0814870:intron | 30.0% | |
| TAAAATTCCTAAGTCTTTGC+AGG | + | chr5_3:47400260-47400279 | Msa0814870:intron | 30.0% | |
| TAGTCACAACTTGCAAAAAT+TGG | + | chr5_3:47400287-47400306 | Msa0814870:intron | 30.0% | |
| AACTTGCAAAAATTGGATCT+TGG | + | chr5_3:47400294-47400313 | Msa0814870:intron | 30.0% | |
| !!! | TTGGATCTTGGTTTTATGTT+CGG | + | chr5_3:47400306-47400325 | Msa0814870:intron | 30.0% |
| CATATTAAACAGATTCGTGT+TGG | - | chr5_3:47400337-47400356 | None:intergenic | 30.0% | |
| TGTTTAATATGAAACCTGGT+TGG | + | chr5_3:47400346-47400365 | Msa0814870:intron | 30.0% | |
| GGAATTCAAGTATTCAACTA+AGG | + | chr5_3:47400424-47400443 | Msa0814870:intron | 30.0% | |
| CTAAGGAATCTCAATATTCA+AGG | + | chr5_3:47400441-47400460 | Msa0814870:intron | 30.0% | |
| TGAAGAAAACGCTATGAAAA+TGG | - | chr5_3:47400596-47400615 | None:intergenic | 30.0% | |
| TCAGATATGGAATTAGAAGA+AGG | + | chr5_3:47400696-47400715 | Msa0814870:intron | 30.0% | |
| CAGATATGGAATTAGAAGAA+GGG | + | chr5_3:47400697-47400716 | Msa0814870:intron | 30.0% | |
| AGATATGGAATTAGAAGAAG+GGG | + | chr5_3:47400698-47400717 | Msa0814870:intron | 30.0% | |
| !!! | AATGCTGGTTTTTAAAAAGG+AGG | + | chr5_3:47401027-47401046 | Msa0814870:intron | 30.0% |
| !!! | ATGCTGGTTTTTAAAAAGGA+GGG | + | chr5_3:47401028-47401047 | Msa0814870:intron | 30.0% |
| CCACTTCATGTAATAACAAA+AGG | - | chr5_3:47401205-47401224 | None:intergenic | 30.0% | |
| !!! | CCTTTTGTTATTACATGAAG+TGG | + | chr5_3:47401202-47401221 | Msa0814870:intron | 30.0% |
| ! | ATTTTGCAAATCCTTTAAGC+TGG | + | chr5_3:47401373-47401392 | Msa0814870:intron | 30.0% |
| ! | AACTATTTTATCAACGTCGA+AGG | - | chr5_3:47401685-47401704 | None:intergenic | 30.0% |
| TCACTTCCATAATCATTGAT+TGG | + | chr5_3:47401731-47401750 | Msa0814870:three_prime_UTR | 30.0% | |
| ! | AATCATTGATTGGATTTGAG+TGG | + | chr5_3:47401741-47401760 | Msa0814870:three_prime_UTR | 30.0% |
| ATTAACGTTGTGCAATTTCA+GGG | - | chr5_3:47401815-47401834 | None:intergenic | 30.0% | |
| AATTAACGTTGTGCAATTTC+AGG | - | chr5_3:47401816-47401835 | None:intergenic | 30.0% | |
| TGACTAACGGAAAAATTTGA+CGG | - | chr5_3:47401851-47401870 | None:intergenic | 30.0% | |
| ACTGCATTATTACTAAATCG+TGG | + | chr5_3:47401971-47401990 | Msa0814870:three_prime_UTR | 30.0% | |
| AGTTGAGATATCACAGCTTT+GGG | - | chr5_3:47397560-47397579 | None:intergenic | 35.0% | |
| ATGAGGAATAACACAACGAA+AGG | - | chr5_3:47397852-47397871 | None:intergenic | 35.0% | |
| AGAAAAAAAGGAACAGGATG+AGG | - | chr5_3:47397869-47397888 | None:intergenic | 35.0% | |
| ! | TAATGATCTTTTGTCAGGCT+AGG | - | chr5_3:47398046-47398065 | None:intergenic | 35.0% |
| !! | TTGGCCCCTTTTAAAAAAAG+AGG | + | chr5_3:47398164-47398183 | Msa0814870:intron | 35.0% |
| !! | TGGCCCCTTTTAAAAAAAGA+GGG | + | chr5_3:47398165-47398184 | Msa0814870:intron | 35.0% |
| !!! | TCCCCCTCTTTTTTTAAAAG+GGG | - | chr5_3:47398171-47398190 | None:intergenic | 35.0% |
| ! | GTTGCTTTGTTGTGAAAAGT+TGG | + | chr5_3:47398240-47398259 | Msa0814870:intron | 35.0% |
| ! | TGCTTTGTTGTGAAAAGTTG+GGG | + | chr5_3:47398242-47398261 | Msa0814870:intron | 35.0% |
| !! | TTTTAGAGGCTTCAGTTGTT+TGG | + | chr5_3:47398268-47398287 | Msa0814870:intron | 35.0% |
| !!! | TTTGAGCGTTAGTTTTTCCA+GGG | + | chr5_3:47398291-47398310 | Msa0814870:intron | 35.0% |
| GAATGCTATGTTGGATTTGT+TGG | + | chr5_3:47398381-47398400 | Msa0814870:intron | 35.0% | |
| !! | TTGGATTTGTTGGGTTGTAA+TGG | + | chr5_3:47398391-47398410 | Msa0814870:intron | 35.0% |
| !!! | GGTTGTAATGGTTTTGTTGA+GGG | + | chr5_3:47398403-47398422 | Msa0814870:intron | 35.0% |
| ACAACCAATCCCAGATAAAA+CGG | - | chr5_3:47398511-47398530 | None:intergenic | 35.0% | |
| ! | GGCTAGTTAATTTCGCTTAT+TGG | + | chr5_3:47398554-47398573 | Msa0814870:intron | 35.0% |
| TTTATATTAGGTGTAGAGCC+TGG | + | chr5_3:47398579-47398598 | Msa0814870:intron | 35.0% | |
| ! | ATTGCTTTGTTAGGAAGTGA+AGG | + | chr5_3:47398753-47398772 | Msa0814870:intron | 35.0% |
| ! | TTGCTTTGTTAGGAAGTGAA+GGG | + | chr5_3:47398754-47398773 | Msa0814870:intron | 35.0% |
| !!! | TTGCATCTTGTTTTGTCCTT+TGG | + | chr5_3:47398866-47398885 | Msa0814870:intron | 35.0% |
| TGAATAATTGGCAGATCCAA+AGG | - | chr5_3:47398885-47398904 | None:intergenic | 35.0% | |
| GTTGTTCCAAAAAGATCTAC+TGG | + | chr5_3:47399069-47399088 | Msa0814870:CDS | 35.0% | |
| ! | GTGGTGTTAATGTTGTTGTT+TGG | + | chr5_3:47399135-47399154 | Msa0814870:intron | 35.0% |
| ACATAGTAACAACAAGAAGC+AGG | - | chr5_3:47399219-47399238 | None:intergenic | 35.0% | |
| ATTTAACCAAGTTTGTGCCT+CGG | - | chr5_3:47399901-47399920 | None:intergenic | 35.0% | |
| ! | ATCTAATAGATCGTTGGTTG+CGG | + | chr5_3:47400012-47400031 | Msa0814870:intron | 35.0% |
| !!! | GCTTTGGGCTAGTTTAATTT+TGG | + | chr5_3:47400172-47400191 | Msa0814870:intron | 35.0% |
| GCAAAAAATTCCCTAATGTG+AGG | + | chr5_3:47400229-47400248 | Msa0814870:intron | 35.0% | |
| AAGGTTATGGTGATTAGAAG+AGG | - | chr5_3:47400522-47400541 | None:intergenic | 35.0% | |
| ! | GATCGATTTCTCAAAGGTTA+TGG | - | chr5_3:47400535-47400554 | None:intergenic | 35.0% |
| ! | AAACTCGATCGATTTCTCAA+AGG | - | chr5_3:47400541-47400560 | None:intergenic | 35.0% |
| !! | TTCTTCCTATTTTTCTGCTG+TGG | + | chr5_3:47400658-47400677 | Msa0814870:intron | 35.0% |
| CTCTAATGCTAGTTCAGATA+TGG | + | chr5_3:47400683-47400702 | Msa0814870:intron | 35.0% | |
| AATTAGAAGAAGGGGAAGAA+TGG | + | chr5_3:47400706-47400725 | Msa0814870:intron | 35.0% | |
| ATGATGGTTTGAACGATTCT+GGG | + | chr5_3:47400791-47400810 | Msa0814870:intron | 35.0% | |
| ! | GTGTTTTCTTCCAAATATGC+AGG | + | chr5_3:47401627-47401646 | Msa0814870:intron | 35.0% |
| TTTCTCTTTGCCTGCATATT+TGG | - | chr5_3:47401640-47401659 | None:intergenic | 35.0% | |
| !! | GATGTTTTGTTAATCTCAGG+AGG | - | chr5_3:47401785-47401804 | None:intergenic | 35.0% |
| TTAACGTTGTGCAATTTCAG+GGG | - | chr5_3:47401814-47401833 | None:intergenic | 35.0% | |
| TGCACATCAGTGAAAAACTT+CGG | - | chr5_3:47401898-47401917 | None:intergenic | 35.0% | |
| TTGAGTTCAGGGAACATATA+TGG | - | chr5_3:47402029-47402048 | None:intergenic | 35.0% | |
| TGCCTGACAACAAATTTGAC+CGG | + | chr5_3:47397486-47397505 | Msa0814870:CDS | 40.0% | |
| GTTGAGATATCACAGCTTTG+GGG | - | chr5_3:47397559-47397578 | None:intergenic | 40.0% | |
| GAGTTGAGATATCACAGCTT+TGG | - | chr5_3:47397561-47397580 | None:intergenic | 40.0% | |
| GTTTGTCTTTCTTCGGGAAA+AGG | - | chr5_3:47397709-47397728 | None:intergenic | 40.0% | |
| !! | ATGGTTTGGTCTTCGATCAA+TGG | - | chr5_3:47397749-47397768 | None:intergenic | 40.0% |
| ! | TGGGGCGGTATATTTTATTC+TGG | + | chr5_3:47397791-47397810 | Msa0814870:intron | 40.0% |
| !! | GGCCCCTTTTAAAAAAAGAG+GGG | + | chr5_3:47398166-47398185 | Msa0814870:intron | 40.0% |
| !! | GCCCCTTTTAAAAAAAGAGG+GGG | + | chr5_3:47398167-47398186 | Msa0814870:intron | 40.0% |
| !!! | GTTTGAGCGTTAGTTTTTCC+AGG | + | chr5_3:47398290-47398309 | Msa0814870:intron | 40.0% |
| AGTGACATGGAATGCTATGT+TGG | + | chr5_3:47398372-47398391 | Msa0814870:intron | 40.0% | |
| !!! | GGGTTGTAATGGTTTTGTTG+AGG | + | chr5_3:47398402-47398421 | Msa0814870:intron | 40.0% |
| ! | TTTGGGATGATTTCGTCTCA+AGG | + | chr5_3:47398474-47398493 | Msa0814870:intron | 40.0% |
| TTTGTTAGGAAGTGAAGGGA+AGG | + | chr5_3:47398758-47398777 | Msa0814870:intron | 40.0% | |
| ACAACCAACTCCAATGAGTA+TGG | - | chr5_3:47398784-47398803 | None:intergenic | 40.0% | |
| GTTGTTCCAAACACATCTAC+TGG | + | chr5_3:47398997-47399016 | Msa0814870:CDS | 40.0% | |
| GTTGTTGTCTATGTTGTTCG+TGG | + | chr5_3:47399116-47399135 | Msa0814870:intron | 40.0% | |
| AATACCACGTGAATTGTCAG+AGG | - | chr5_3:47399463-47399482 | None:intergenic | 40.0% | |
| ! | CGGCTTTTACAACCTATAGA+TGG | + | chr5_3:47399602-47399621 | Msa0814870:intron | 40.0% |
| GAACTCTACACACCATCTAT+AGG | - | chr5_3:47399617-47399636 | None:intergenic | 40.0% | |
| TTTAACCAAGTTTGTGCCTC+GGG | - | chr5_3:47399900-47399919 | None:intergenic | 40.0% | |
| GCACAAACTTGGTTAAATCC+TGG | + | chr5_3:47399903-47399922 | Msa0814870:intron | 40.0% | |
| GGACAGCTGTGATAAAGATA+AGG | - | chr5_3:47399974-47399993 | None:intergenic | 40.0% | |
| ACATCCAACATTCTCAGACA+GGG | - | chr5_3:47400094-47400113 | None:intergenic | 40.0% | |
| AACATCCAACATTCTCAGAC+AGG | - | chr5_3:47400095-47400114 | None:intergenic | 40.0% | |
| TGTCTGAGAATGTTGGATGT+TGG | + | chr5_3:47400094-47400113 | Msa0814870:intron | 40.0% | |
| ACATGTCAAAGGCAACATGT+CGG | - | chr5_3:47400137-47400156 | None:intergenic | 40.0% | |
| ! | ATTCCCTAATGTGAGGGTTT+TGG | + | chr5_3:47400236-47400255 | Msa0814870:intron | 40.0% |
| ! | TTCCCTAATGTGAGGGTTTT+GGG | + | chr5_3:47400237-47400256 | Msa0814870:intron | 40.0% |
| TACCCAAAACCCTCACATTA+GGG | - | chr5_3:47400242-47400261 | None:intergenic | 40.0% | |
| TTACCCAAAACCCTCACATT+AGG | - | chr5_3:47400243-47400262 | None:intergenic | 40.0% | |
| CTACAATCCTGCAAAGACTT+AGG | - | chr5_3:47400270-47400289 | None:intergenic | 40.0% | |
| AGGGTCACTGCAATTCAAAT+TGG | + | chr5_3:47400402-47400421 | Msa0814870:intron | 40.0% | |
| GGGTCACTGCAATTCAAATT+GGG | + | chr5_3:47400403-47400422 | Msa0814870:intron | 40.0% | |
| ! | AGAAAGCACACAAAGGATGT+TGG | - | chr5_3:47400474-47400493 | None:intergenic | 40.0% |
| ! | GTTGAGAAGAAAGCACACAA+AGG | - | chr5_3:47400481-47400500 | None:intergenic | 40.0% |
| TGAGAAATCGATCGAGTTTC+TGG | + | chr5_3:47400542-47400561 | Msa0814870:intron | 40.0% | |
| GAGAAATCGATCGAGTTTCT+GGG | + | chr5_3:47400543-47400562 | Msa0814870:intron | 40.0% | |
| GAGTACCACAGCAGAAAAAT+AGG | - | chr5_3:47400666-47400685 | None:intergenic | 40.0% | |
| TGGAGAAGGAATGTGTTTAC+TGG | + | chr5_3:47400726-47400745 | Msa0814870:intron | 40.0% | |
| GGAGAAGGAATGTGTTTACT+GGG | + | chr5_3:47400727-47400746 | Msa0814870:intron | 40.0% | |
| AAGGAATGTGTTTACTGGGT+TGG | + | chr5_3:47400731-47400750 | Msa0814870:intron | 40.0% | |
| ! | GATGATGGTTTGAACGATTC+TGG | + | chr5_3:47400790-47400809 | Msa0814870:intron | 40.0% |
| ! | CTGAGTTGGCAATAGTGATT+TGG | - | chr5_3:47400948-47400967 | None:intergenic | 40.0% |
| TAATAGAGGGACCAAAATGC+TGG | + | chr5_3:47401012-47401031 | Msa0814870:intron | 40.0% | |
| GATGAAGGAAAGATTCACCA+AGG | + | chr5_3:47401705-47401724 | Msa0814870:three_prime_UTR | 40.0% | |
| GATTATGGAAGTGACAACCT+TGG | - | chr5_3:47401725-47401744 | None:intergenic | 40.0% | |
| TAACGTTGTGCAATTTCAGG+GGG | - | chr5_3:47401813-47401832 | None:intergenic | 40.0% | |
| CTAACGGAAAAATTTGACGG+AGG | - | chr5_3:47401848-47401867 | None:intergenic | 40.0% | |
| ! | CAAAACGTGATGCTGACTAA+CGG | - | chr5_3:47401864-47401883 | None:intergenic | 40.0% |
| CACATCAGTGAAAAACTTCG+GGG | - | chr5_3:47401896-47401915 | None:intergenic | 40.0% | |
| GCACATCAGTGAAAAACTTC+GGG | - | chr5_3:47401897-47401916 | None:intergenic | 40.0% | |
| !! | AGCCGGTCAAATTTGTTGTC+AGG | - | chr5_3:47397491-47397510 | None:intergenic | 45.0% |
| ! | TTTTGTGCGAACACTTCGCA+AGG | + | chr5_3:47397519-47397538 | Msa0814870:CDS | 45.0% |
| CACTTCGCAAGGAAAATCTC+TGG | + | chr5_3:47397530-47397549 | Msa0814870:CDS | 45.0% | |
| CGAAGCATATGGCATCATTG+AGG | + | chr5_3:47397589-47397608 | Msa0814870:CDS | 45.0% | |
| AGCGATAGTAGGGTTACGAA+GGG | - | chr5_3:47397686-47397705 | None:intergenic | 45.0% | |
| ! | GTTTGGTCTTCGATCAATGG+CGG | - | chr5_3:47397746-47397765 | None:intergenic | 45.0% |
| TCAACTGGGGAGATATGGTT+TGG | - | chr5_3:47397763-47397782 | None:intergenic | 45.0% | |
| CATATCTCCCCAGTTGAGTT+GGG | + | chr5_3:47397766-47397785 | Msa0814870:CDS | 45.0% | |
| GTAGCTCTTCTTGTCATCTG+TGG | + | chr5_3:47397904-47397923 | Msa0814870:intron | 45.0% | |
| CTCAAACATCTACATCTCCC+TGG | - | chr5_3:47398311-47398330 | None:intergenic | 45.0% | |
| !!! | TGGTTTTGTTGAGGGTGCTA+AGG | + | chr5_3:47398411-47398430 | Msa0814870:intron | 45.0% |
| TTCGTCTCAAGGTTCTTCTG+TGG | + | chr5_3:47398485-47398504 | Msa0814870:intron | 45.0% | |
| !! | TCTTCTGTGGCCGTTTTATC+TGG | + | chr5_3:47398498-47398517 | Msa0814870:intron | 45.0% |
| !! | CTTCTGTGGCCGTTTTATCT+GGG | + | chr5_3:47398499-47398518 | Msa0814870:intron | 45.0% |
| !! | TGGGATTGGTTGTTGTGAAG+AGG | + | chr5_3:47398518-47398537 | Msa0814870:intron | 45.0% |
| GAGAGATTGTGGGGGAAAAT+TGG | + | chr5_3:47398601-47398620 | Msa0814870:intron | 45.0% | |
| ATTGTGGGGGAAAATTGGAG+AGG | + | chr5_3:47398606-47398625 | Msa0814870:intron | 45.0% | |
| AAGGCCATACTCATTGGAGT+TGG | + | chr5_3:47398777-47398796 | Msa0814870:intron | 45.0% | |
| TCAATGGTCTGCAAACTGCA+GGG | + | chr5_3:47399027-47399046 | Msa0814870:CDS | 45.0% | |
| CATAACTGAGATCCTAACCC+AGG | - | chr5_3:47399812-47399831 | None:intergenic | 45.0% | |
| ! | CTGGGTTAGGATCTCAGTTA+TGG | + | chr5_3:47399810-47399829 | Msa0814870:intron | 45.0% |
| !! | GGTTGTTTGGTGTGTACTTG+AGG | + | chr5_3:47399847-47399866 | Msa0814870:intron | 45.0% |
| ! | GAGTTTGGTGGCTAATATCC+AGG | - | chr5_3:47399924-47399943 | None:intergenic | 45.0% |
| ! | CACCAAACTCCCCTTTTCAA+GGG | + | chr5_3:47399934-47399953 | Msa0814870:intron | 45.0% |
| ! | CCTTATTTGCTCCTATCCGA+GGG | - | chr5_3:47400042-47400061 | None:intergenic | 45.0% |
| ! | ACCTTATTTGCTCCTATCCG+AGG | - | chr5_3:47400043-47400062 | None:intergenic | 45.0% |
| ACATGAGCAGCACATGTCAA+AGG | - | chr5_3:47400148-47400167 | None:intergenic | 45.0% | |
| ! | TTTGACATGTGCTGCTCATG+TGG | + | chr5_3:47400147-47400166 | Msa0814870:intron | 45.0% |
| GAAGAGGATGAAAAAGACGC+AGG | - | chr5_3:47400506-47400525 | None:intergenic | 45.0% | |
| AAGAAGGGGAAGAATGGAGA+AGG | + | chr5_3:47400712-47400731 | Msa0814870:intron | 45.0% | |
| !! | TTTACTGGGTTGGTGAACCT+GGG | + | chr5_3:47400741-47400760 | Msa0814870:intron | 45.0% |
| GATGGTGTAAACGATGGTCA+TGG | + | chr5_3:47400766-47400785 | Msa0814870:intron | 45.0% | |
| AACGATGGTCATGGAGATGA+TGG | + | chr5_3:47400775-47400794 | Msa0814870:intron | 45.0% | |
| ! | TGAACGATTCTGGGTTGAGT+AGG | + | chr5_3:47400800-47400819 | Msa0814870:intron | 45.0% |
| ACGGAAAAATTTGACGGAGG+AGG | - | chr5_3:47401845-47401864 | None:intergenic | 45.0% | |
| ATCAGTGAAAAACTTCGGGG+TGG | - | chr5_3:47401893-47401912 | None:intergenic | 45.0% | |
| !!! | TTATTCTTTTATAATAATTA+AGG | - | chr5_3:47400884-47400903 | None:intergenic | 5.0% |
| !! | GAGATATCACAGCTTTGGGG+AGG | - | chr5_3:47397556-47397575 | None:intergenic | 50.0% |
| TTGAGGGAGGCGAGAAAACT+CGG | - | chr5_3:47397615-47397634 | None:intergenic | 50.0% | |
| GAGCGATAGTAGGGTTACGA+AGG | - | chr5_3:47397687-47397706 | None:intergenic | 50.0% | |
| CGGGAAAAGGAGCGATAGTA+GGG | - | chr5_3:47397696-47397715 | None:intergenic | 50.0% | |
| TCGGGAAAAGGAGCGATAGT+AGG | - | chr5_3:47397697-47397716 | None:intergenic | 50.0% | |
| CCAACTCAACTGGGGAGATA+TGG | - | chr5_3:47397768-47397787 | None:intergenic | 50.0% | |
| CCATATCTCCCCAGTTGAGT+TGG | + | chr5_3:47397765-47397784 | Msa0814870:CDS | 50.0% | |
| !! | TCCCCAGTTGAGTTGGGATT+GGG | + | chr5_3:47397772-47397791 | Msa0814870:CDS | 50.0% |
| CTTCTTGTCATCTGTGGCGT+TGG | + | chr5_3:47397910-47397929 | Msa0814870:CDS | 50.0% | |
| !! | GTGGCCGTTTTATCTGGGAT+TGG | + | chr5_3:47398504-47398523 | Msa0814870:intron | 50.0% |
| TGTAGAGCCTGGAGAGATTG+TGG | + | chr5_3:47398590-47398609 | Msa0814870:intron | 50.0% | |
| GTAGAGCCTGGAGAGATTGT+GGG | + | chr5_3:47398591-47398610 | Msa0814870:intron | 50.0% | |
| TAGAGCCTGGAGAGATTGTG+GGG | + | chr5_3:47398592-47398611 | Msa0814870:intron | 50.0% | |
| ! | TTTTCCCCCACAATCTCTCC+AGG | - | chr5_3:47398600-47398619 | None:intergenic | 50.0% |
| ! | AAATTGGAGAGGTGGTGGTG+CGG | + | chr5_3:47398617-47398636 | Msa0814870:intron | 50.0% |
| GAAGGGAAGGCCATACTCAT+TGG | + | chr5_3:47398771-47398790 | Msa0814870:intron | 50.0% | |
| CTCAATGGTCTGCAAACTGC+AGG | + | chr5_3:47399026-47399045 | Msa0814870:CDS | 50.0% | |
| GAAGCCTCTGACAATTCACG+TGG | + | chr5_3:47399456-47399475 | Msa0814870:intron | 50.0% | |
| TACCCTGTTAGCGATGTCCT+GGG | + | chr5_3:47399792-47399811 | Msa0814870:intron | 50.0% | |
| AACCCAGGACATCGCTAACA+GGG | - | chr5_3:47399797-47399816 | None:intergenic | 50.0% | |
| TAACCCAGGACATCGCTAAC+AGG | - | chr5_3:47399798-47399817 | None:intergenic | 50.0% | |
| TGTTAGCGATGTCCTGGGTT+AGG | + | chr5_3:47399797-47399816 | Msa0814870:intron | 50.0% | |
| !! | GTTTGGTGTGTACTTGAGGC+TGG | + | chr5_3:47399851-47399870 | Msa0814870:intron | 50.0% |
| CCTTGAAAAGGGGAGTTTGG+TGG | - | chr5_3:47399936-47399955 | None:intergenic | 50.0% | |
| ! | CCACCAAACTCCCCTTTTCA+AGG | + | chr5_3:47399933-47399952 | Msa0814870:intron | 50.0% |
| CTCCCTTGAAAAGGGGAGTT+TGG | - | chr5_3:47399939-47399958 | None:intergenic | 50.0% | |
| GATATGAAAGAACCCAGGGC+AGG | - | chr5_3:47399995-47400014 | None:intergenic | 50.0% | |
| CCCTCGGATAGGAGCAAATA+AGG | + | chr5_3:47400039-47400058 | Msa0814870:intron | 50.0% | |
| CATGCCCTGTCTGAGAATGT+TGG | + | chr5_3:47400087-47400106 | Msa0814870:intron | 50.0% | |
| GTTGTCTCAAATGGCCAACC+AGG | - | chr5_3:47400363-47400382 | None:intergenic | 50.0% | |
| !! | GTTTACTGGGTTGGTGAACC+TGG | + | chr5_3:47400740-47400759 | Msa0814870:intron | 50.0% |
| !! | TTACTGGGTTGGTGAACCTG+GGG | + | chr5_3:47400742-47400761 | Msa0814870:intron | 50.0% |
| ATCGTTTACACCATCACCCC+AGG | - | chr5_3:47400761-47400780 | None:intergenic | 50.0% | |
| ! | TGGGGTGATGGTGTAAACGA+TGG | + | chr5_3:47400760-47400779 | Msa0814870:intron | 50.0% |
| ! | TTAATGACGTGGCGCTGAGT+TGG | - | chr5_3:47400962-47400981 | None:intergenic | 50.0% |
| TCAGCGCCACGTCATTAATG+AGG | + | chr5_3:47400964-47400983 | Msa0814870:intron | 50.0% | |
| CAGCGCCACGTCATTAATGA+GGG | + | chr5_3:47400965-47400984 | Msa0814870:intron | 50.0% | |
| AGCGCCACGTCATTAATGAG+GGG | + | chr5_3:47400966-47400985 | Msa0814870:intron | 50.0% | |
| AGTCCCCCTCATTAATGACG+TGG | - | chr5_3:47400973-47400992 | None:intergenic | 50.0% | |
| CGCACAAAAAGCGATCGAGC+CGG | - | chr5_3:47397508-47397527 | None:intergenic | 55.0% | |
| CTCAGCGACGACGAAGCATA+TGG | + | chr5_3:47397578-47397597 | Msa0814870:CDS | 55.0% | |
| ! | GTTTTCTCGCCTCCCTCAAG+CGG | + | chr5_3:47397616-47397635 | Msa0814870:CDS | 55.0% |
| ! | TGCGGTTTAGCTCCGCTTGA+GGG | - | chr5_3:47397631-47397650 | None:intergenic | 55.0% |
| ! | ATGCGGTTTAGCTCCGCTTG+AGG | - | chr5_3:47397632-47397651 | None:intergenic | 55.0% |
| TGGTCTTCGATCAATGGCGG+CGG | - | chr5_3:47397743-47397762 | None:intergenic | 55.0% | |
| !! | CTCCCCAGTTGAGTTGGGAT+TGG | + | chr5_3:47397771-47397790 | Msa0814870:CDS | 55.0% |
| CCCCAATCCCAACTCAACTG+GGG | - | chr5_3:47397776-47397795 | None:intergenic | 55.0% | |
| !! | CCCCAGTTGAGTTGGGATTG+GGG | + | chr5_3:47397773-47397792 | Msa0814870:CDS | 55.0% |
| GCCCCAATCCCAACTCAACT+GGG | - | chr5_3:47397777-47397796 | None:intergenic | 55.0% | |
| !! | CAGTTGAGTTGGGATTGGGG+CGG | + | chr5_3:47397776-47397795 | Msa0814870:CDS | 55.0% |
| CTGGCGCGAAGTGTAGTAGA+TGG | - | chr5_3:47397938-47397957 | None:intergenic | 55.0% | |
| CATCTACTACACTTCGCGCC+AGG | + | chr5_3:47397936-47397955 | Msa0814870:CDS | 55.0% | |
| CTGAGCAGTAGCAGCAGCAT+CGG | - | chr5_3:47398094-47398113 | None:intergenic | 55.0% | |
| AGAGCCTGGAGAGATTGTGG+GGG | + | chr5_3:47398593-47398612 | Msa0814870:intron | 55.0% | |
| GTGGGGGAAAATTGGAGAGG+TGG | + | chr5_3:47398609-47398628 | Msa0814870:intron | 55.0% | |
| GGGGAAAATTGGAGAGGTGG+TGG | + | chr5_3:47398612-47398631 | Msa0814870:intron | 55.0% | |
| TGGTGCGGTGAGGGGAAAAT+TGG | + | chr5_3:47398632-47398651 | Msa0814870:intron | 55.0% | |
| CTACCCTGTTAGCGATGTCC+TGG | + | chr5_3:47399791-47399810 | Msa0814870:intron | 55.0% | |
| ACCAAGTTTGTGCCTCGGGA+GGG | - | chr5_3:47399896-47399915 | None:intergenic | 55.0% | |
| AACCAAGTTTGTGCCTCGGG+AGG | - | chr5_3:47399897-47399916 | None:intergenic | 55.0% | |
| !! | ACTCCCCTTTTCAAGGGAGC+AGG | + | chr5_3:47399940-47399959 | Msa0814870:intron | 55.0% |
| CAGCCTGCTCCCTTGAAAAG+GGG | - | chr5_3:47399946-47399965 | None:intergenic | 55.0% | |
| GCAGCCTGCTCCCTTGAAAA+GGG | - | chr5_3:47399947-47399966 | None:intergenic | 55.0% | |
| AGCAGCCTGCTCCCTTGAAA+AGG | - | chr5_3:47399948-47399967 | None:intergenic | 55.0% | |
| !! | TTTTCAAGGGAGCAGGCTGC+TGG | + | chr5_3:47399947-47399966 | Msa0814870:intron | 55.0% |
| TTATCACAGCTGTCCTGCCC+TGG | + | chr5_3:47399979-47399998 | Msa0814870:intron | 55.0% | |
| TATCACAGCTGTCCTGCCCT+GGG | + | chr5_3:47399980-47399999 | Msa0814870:intron | 55.0% | |
| ! | CGTTGGTTGCGGATTACCCT+CGG | + | chr5_3:47400023-47400042 | Msa0814870:intron | 55.0% |
| ! | GTTGCGGATTACCCTCGGAT+AGG | + | chr5_3:47400028-47400047 | Msa0814870:intron | 55.0% |
| TGCTGCTCATGTGGCTGCTT+TGG | + | chr5_3:47400156-47400175 | Msa0814870:intron | 55.0% | |
| ! | GCTGCTCATGTGGCTGCTTT+GGG | + | chr5_3:47400157-47400176 | Msa0814870:intron | 55.0% |
| GCGCCACGTCATTAATGAGG+GGG | + | chr5_3:47400967-47400986 | Msa0814870:intron | 55.0% | |
| ! | GGTTTAGCTCCGCTTGAGGG+AGG | - | chr5_3:47397628-47397647 | None:intergenic | 60.0% |
| AAACCGCATCGTCGAAGCCG+AGG | + | chr5_3:47397643-47397662 | Msa0814870:CDS | 60.0% | |
| CTACCTCGGCTTCGACGATG+CGG | - | chr5_3:47397649-47397668 | None:intergenic | 60.0% | |
| TCTTCGATCAATGGCGGCGG+TGG | - | chr5_3:47397740-47397759 | None:intergenic | 60.0% | |
| CGCCCCAATCCCAACTCAAC+TGG | - | chr5_3:47397778-47397797 | None:intergenic | 60.0% | |
| !! | GTAGCAGCAGCATCGGCAGT+GGG | - | chr5_3:47398087-47398106 | None:intergenic | 60.0% |
| !! | AGTAGCAGCAGCATCGGCAG+TGG | - | chr5_3:47398088-47398107 | None:intergenic | 60.0% |
| CGATGCTGCTGCTACTGCTC+AGG | + | chr5_3:47398092-47398111 | Msa0814870:CDS | 60.0% | |
| ACCCTCCCGAGGCACAAACT+TGG | + | chr5_3:47399892-47399911 | Msa0814870:intron | 60.0% | |
| !! | GGTTGGTGAACCTGGGGTGA+TGG | + | chr5_3:47400748-47400767 | Msa0814870:intron | 60.0% |
| ! | GAGAGGTGGTGGTGCGGTGA+GGG | + | chr5_3:47398623-47398642 | Msa0814870:intron | 65.0% |
| ! | AGAGGTGGTGGTGCGGTGAG+GGG | + | chr5_3:47398624-47398643 | Msa0814870:intron | 65.0% |
| AGCGTGTCTGAACCCTCCCG+AGG | + | chr5_3:47399881-47399900 | Msa0814870:intron | 65.0% | |
| ! | GGAGAGGTGGTGGTGCGGTG+AGG | + | chr5_3:47398622-47398641 | Msa0814870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 47397485 | 47402169 | 47397485 | ID=Msa0814870;Name=Msa0814870 |
| chr5_3 | mRNA | 47397485 | 47402169 | 47397485 | ID=Msa0814870-mRNA-1;Parent=Msa0814870;Name=Msa0814870-mRNA-1;_AED=0.08;_eAED=0.31;_QI=0|0.6|0.66|1|0.6|0.5|6|498|171 |
| chr5_3 | exon | 47397485 | 47397664 | 47397485 | ID=Msa0814870-mRNA-1:exon:14348;Parent=Msa0814870-mRNA-1 |
| chr5_3 | exon | 47397719 | 47397797 | 47397719 | ID=Msa0814870-mRNA-1:exon:14349;Parent=Msa0814870-mRNA-1 |
| chr5_3 | exon | 47397905 | 47397957 | 47397905 | ID=Msa0814870-mRNA-1:exon:14350;Parent=Msa0814870-mRNA-1 |
| chr5_3 | exon | 47398048 | 47398113 | 47398048 | ID=Msa0814870-mRNA-1:exon:14351;Parent=Msa0814870-mRNA-1 |
| chr5_3 | exon | 47398976 | 47399090 | 47398976 | ID=Msa0814870-mRNA-1:exon:14352;Parent=Msa0814870-mRNA-1 |
| chr5_3 | exon | 47401649 | 47402169 | 47401649 | ID=Msa0814870-mRNA-1:exon:14353;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47397485 | 47397664 | 47397485 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47397719 | 47397797 | 47397719 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47397905 | 47397957 | 47397905 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47398048 | 47398113 | 47398048 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47398976 | 47399090 | 47398976 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | CDS | 47401649 | 47401671 | 47401649 | ID=Msa0814870-mRNA-1:cds;Parent=Msa0814870-mRNA-1 |
| chr5_3 | three_prime_UTR | 47401672 | 47402169 | 47401672 | ID=Msa0814870-mRNA-1:three_prime_utr;Parent=Msa0814870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
