AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0557850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557850 MtrunA17_Chr4g0047171 90.741 216 10 1 75 290 71 276 8.15e-98 288
Msa0557850 MtrunA17_Chr4g0024211 56.055 289 87 9 1 288 1 250 3.54e-75 230
Msa0557850 MtrunA17_Chr1g0176911 48.276 348 113 9 1 288 1 341 9.66e-74 229
Msa0557850 MtrunA17_Chr5g0420431 48.485 363 89 12 1 288 1 340 3.22e-73 228
Msa0557850 MtrunA17_Chr4g0024201 45.806 310 81 10 16 288 16 275 2.25e-63 201
Msa0557850 MtrunA17_Chr3g0081151 44.279 402 99 12 1 288 1 391 8.41e-62 200
Msa0557850 MtrunA17_Chr4g0033381 56.989 186 63 3 105 290 170 338 6.37e-60 194
Msa0557850 MtrunA17_Chr6g0466861 48.029 279 93 7 15 288 16 247 1.95e-47 159
Msa0557850 MtrunA17_Chr4g0007081 63.636 143 48 1 147 289 208 346 1.12e-46 160
Msa0557850 MtrunA17_Chr4g0047181 36.743 479 104 13 1 288 45 515 1.56e-46 163
Msa0557850 MtrunA17_Chr8g0383411 58.929 112 41 2 179 289 269 376 5.94e-37 135
Msa0557850 MtrunA17_Chr2g0328311 62.195 82 30 1 207 288 2 82 4.34e-27 101
Msa0557850 MtrunA17_Chr4g0069771 42.515 167 55 3 40 193 68 206 3.31e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0557850 AT2G34700.1 44.966 149 75 2 146 288 26 173 2.04e-37 131
Msa0557850 AT2G33790.1 37.681 207 118 5 93 290 35 239 1.41e-29 112
Msa0557850 AT1G28290.2 45.926 135 64 3 163 290 183 315 3.07e-29 113
Msa0557850 AT1G28290.1 45.926 135 64 3 163 290 227 359 4.68e-29 114

Find 136 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTCCCCGTTAAGAAAATT+AGG 0.147448 4_1:-56344748 Msa0557850:exon
TCCTCTTCCTCTCTCTTTCT+AGG 0.176186 4_1:-56347636 Msa0557850:five_prime_UTR
TCTCTTACACTTTGAGAAAA+TGG 0.191278 4_1:-56347606 Msa0557850:exon
GTGAGTGAGGGTTGATTTAT+AGG 0.202696 4_1:+56347684 None:intergenic
TGCTGGTGTTGATACTCTTT+TGG 0.212871 4_1:-56347051 Msa0557850:CDS
TTGTGTGAGGAGGGTAAGTT+GGG 0.250591 4_1:+56347504 None:intergenic
TCCACTTTCGTGTTAAATTA+TGG 0.251191 4_1:-56344668 Msa0557850:three_prime_UTR
GCATAGCTTGTGATGTTCTT+TGG 0.271925 4_1:+56344936 None:intergenic
AACCTTCATGGTGGTCTTAC+CGG 0.294151 4_1:-56344858 Msa0557850:CDS
TGAACAGCTATAAAGCTTCT+AGG 0.305603 4_1:+56347104 None:intergenic
CTTCGCCACAAATGGCTTCT+CGG 0.313010 4_1:+56344821 None:intergenic
TTGGGAGCTACTCAAATTCT+TGG 0.313293 4_1:-56347032 Msa0557850:intron
TTGGAACAGGAGGGTGTAAT+GGG 0.327634 4_1:+56347186 None:intergenic
GTTGTGTGAGGAGGGTAAGT+TGG 0.333157 4_1:+56347503 None:intergenic
AACCGTTCTTATCAGTGGTC+TGG 0.337205 4_1:+56344976 None:intergenic
GGGTGTAGAGGGGTGTGAAT+AGG 0.348091 4_1:+56347368 None:intergenic
TCGTGTTAAATTATGGTGTT+TGG 0.355340 4_1:-56344661 Msa0557850:three_prime_UTR
AGGGGTGTAGGATGCAATGG+TGG 0.362731 4_1:+56347128 None:intergenic
TGTCCCCGTTAAGAAAATTA+GGG 0.372373 4_1:-56344747 Msa0557850:exon
GGTGGGTGTGCTGGAGCAGG+TGG 0.379735 4_1:+56347146 None:intergenic
GGGTGTAGTGGTGGATGTGC+TGG 0.382371 4_1:+56347242 None:intergenic
GGTGGTGGTGATGGTGGTGA+GGG 0.385537 4_1:+56347426 None:intergenic
TCCAACCGTGTAGAGAATAA+AGG 0.386366 4_1:+56344791 None:intergenic
GGAGCAACAGGTGTGTGGAC+TGG 0.395530 4_1:+56347263 None:intergenic
TTAAAGCCTTCGAACCTTCA+TGG 0.396084 4_1:-56344870 Msa0557850:CDS
GAGCAACAGGTGTGTGGACT+GGG 0.397889 4_1:+56347264 None:intergenic
CCCTTTATTCTCTACACGGT+TGG 0.398136 4_1:-56344792 Msa0557850:CDS
AGTGAATGTGGTGGTGGTGA+TGG 0.399069 4_1:+56347417 None:intergenic
TGGTGGTGGTGATGGTGGTG+AGG 0.400493 4_1:+56347425 None:intergenic
CAGGGGTTGGTGAGTGAATG+TGG 0.410018 4_1:+56347405 None:intergenic
GTCTTACCGGTGCTGGTCTT+AGG 0.411218 4_1:-56344845 Msa0557850:CDS
CCTCTTCCTCTCTCTTTCTA+GGG 0.411759 4_1:-56347635 Msa0557850:five_prime_UTR
GCGTTAGCCGGTGGGTGAAC+CGG 0.414913 4_1:+56347449 None:intergenic
GAGCAGGAGGGTGAGGATGA+TGG 0.417914 4_1:+56347291 None:intergenic
ACCGTTCTTATCAGTGGTCT+GGG 0.419238 4_1:+56344977 None:intergenic
GGTGAGGATGATGGTGGTGG+TGG 0.424562 4_1:+56347300 None:intergenic
TTCGAAGGCTTTAATCCATT+CGG 0.425021 4_1:+56344879 None:intergenic
TTCGCCACAAATGGCTTCTC+GGG 0.425868 4_1:+56344822 None:intergenic
GTTGGAACAGGAGGGTGTAA+TGG 0.425934 4_1:+56347185 None:intergenic
CATGGTGGTCTTACCGGTGC+TGG 0.430807 4_1:-56344852 Msa0557850:CDS
AGTTGGTGGTTTAGCAGGTA+CGG 0.432220 4_1:+56347328 None:intergenic
TGGTGGTGAGGGGCGTTAGC+CGG 0.434825 4_1:+56347437 None:intergenic
CCGTGAGTTGGTGGTTTAGC+AGG 0.434974 4_1:+56347323 None:intergenic
GTGTGGACTGGGGAAGGAGC+AGG 0.436294 4_1:+56347275 None:intergenic
TTGGTGAGTGAATGTGGTGG+TGG 0.439920 4_1:+56347411 None:intergenic
AATGGTGGGTGTGCTGGAGC+AGG 0.443203 4_1:+56347143 None:intergenic
GAGGGTGAGGATGATGGTGG+TGG 0.446074 4_1:+56347297 None:intergenic
GGATGCAATGGTGGGTGTGC+TGG 0.446386 4_1:+56347137 None:intergenic
TAGGAGAAGGAGTAGGAGCA+GGG 0.447008 4_1:+56347387 None:intergenic
ATAGGAGAAGGAGTAGGAGC+AGG 0.447520 4_1:+56347386 None:intergenic
AGAAGCTTTATAGCTGTTCA+AGG 0.449540 4_1:-56347101 Msa0557850:CDS
GCTGGAGCAGGTGGGTGTAA+TGG 0.449877 4_1:+56347155 None:intergenic
GGAAGACCCTTCGCCACAAA+TGG 0.450329 4_1:+56344813 None:intergenic
GGGGAAGGAGCAGGAGGGTG+AGG 0.451502 4_1:+56347284 None:intergenic
GTGTGAACAGGTGGGTGTAG+TGG 0.456043 4_1:+56347230 None:intergenic
GGTGGATGTGCTGGAGCAAC+AGG 0.458900 4_1:+56347251 None:intergenic
CCCTAGAAAGAGAGAGGAAG+AGG 0.459003 4_1:+56347635 None:intergenic
TGAACAGGTGGGTGTAGTGG+TGG 0.461198 4_1:+56347233 None:intergenic
AATGGAGGGTGAGTTGGAAC+AGG 0.461672 4_1:+56347173 None:intergenic
GGAGCAGGTGGGTGTAATGG+AGG 0.467004 4_1:+56347158 None:intergenic
GGGTGTAATGGAGGGTGAGT+TGG 0.472310 4_1:+56347167 None:intergenic
CCAACCGTGTAGAGAATAAA+GGG 0.474781 4_1:+56344792 None:intergenic
ACCATAATTTAACACGAAAG+TGG 0.478975 4_1:+56344667 None:intergenic
AATGGTAAGGAGGGTGTAGA+GGG 0.479744 4_1:+56347357 None:intergenic
AGAGGAAGAGGATGTGATGT+TGG 0.480795 4_1:+56347647 None:intergenic
GTTGGTGGGTGAAGTGGAGC+TGG 0.482024 4_1:+56347479 None:intergenic
GTTGGTGGTTTAGCAGGTAC+GGG 0.482104 4_1:+56347329 None:intergenic
GGAACAACAGGGGTGTGAAC+AGG 0.484015 4_1:+56347218 None:intergenic
TGGTGGTGGCCGTGAGTTGG+TGG 0.495728 4_1:+56347314 None:intergenic
GGGGTGTAGGATGCAATGGT+GGG 0.495833 4_1:+56347129 None:intergenic
CGAGAAGCCATTTGTGGCGA+AGG 0.502568 4_1:-56344820 Msa0557850:CDS
GGTGAGGGGCGTTAGCCGGT+GGG 0.507227 4_1:+56347441 None:intergenic
GAATGTGGTGGTGGTGATGG+TGG 0.512130 4_1:+56347420 None:intergenic
GAAGGAGTAGGAGCAGGGGT+TGG 0.512859 4_1:+56347392 None:intergenic
TAGGCCCGAGAAGCCATTTG+TGG 0.515068 4_1:-56344826 Msa0557850:CDS
TGGACTGGGGAAGGAGCAGG+AGG 0.517336 4_1:+56347278 None:intergenic
GAACAGCTATAAAGCTTCTA+GGG 0.519875 4_1:+56347105 None:intergenic
GAATGGTAAGGAGGGTGTAG+AGG 0.521002 4_1:+56347356 None:intergenic
GTAAAAGTAGCAATATTGCA+AGG 0.527067 4_1:+56347576 None:intergenic
TGGTGGTGGTGGCCGTGAGT+TGG 0.535050 4_1:+56347311 None:intergenic
GTGGGTGTGCTGGAGCAGGT+GGG 0.537085 4_1:+56347147 None:intergenic
TGGTGAGGGGCGTTAGCCGG+TGG 0.537298 4_1:+56347440 None:intergenic
AGAGGGGTGTGAATAGGAGA+AGG 0.538140 4_1:+56347374 None:intergenic
ACAACAGGGGTGTGAACAGG+TGG 0.540027 4_1:+56347221 None:intergenic
AAGCTTCTAGGGAGGGGTGT+AGG 0.543464 4_1:+56347116 None:intergenic
GTGGTGGTGATGGTGGTGAG+GGG 0.548870 4_1:+56347427 None:intergenic
GAGGGTGAGTTGGAACAGGA+GGG 0.549639 4_1:+56347177 None:intergenic
ACAGGTGTGTGGACTGGGGA+AGG 0.551806 4_1:+56347269 None:intergenic
GACTTAGTTGGTGGGTGAAG+TGG 0.557219 4_1:+56347473 None:intergenic
AGGAGAAGGAGTAGGAGCAG+GGG 0.557814 4_1:+56347388 None:intergenic
GAGCTGGTGTTGTGTGAGGA+GGG 0.558920 4_1:+56347495 None:intergenic
GTCAAATCTTGCAAGTATGC+TGG 0.559072 4_1:-56347068 Msa0557850:CDS
GGAGGGTGAGTTGGAACAGG+AGG 0.559242 4_1:+56347176 None:intergenic
GGAACAGGAGGGTGTAATGG+GGG 0.562210 4_1:+56347188 None:intergenic
GGGTGAACCGGTGACTTAGT+TGG 0.562942 4_1:+56347461 None:intergenic
GCTATAAAGCTTCTAGGGAG+GGG 0.564039 4_1:+56347110 None:intergenic
TGGAACAGGAGGGTGTAATG+GGG 0.566240 4_1:+56347187 None:intergenic
CTCGGGCCTAAGACCAGCAC+CGG 0.566604 4_1:+56344839 None:intergenic
CAGGAGGGTGAGGATGATGG+TGG 0.571819 4_1:+56347294 None:intergenic
GTTATGAGAGAGTGTGAGTG+AGG 0.572156 4_1:+56347671 None:intergenic
TAAGTCACCGGTTCACCCAC+CGG 0.574218 4_1:-56347456 Msa0557850:CDS
AGCTATAAAGCTTCTAGGGA+GGG 0.575095 4_1:+56347109 None:intergenic
GGGAGGGGTGTAGGATGCAA+TGG 0.575724 4_1:+56347125 None:intergenic
AAAATAACCGTTCTTATCAG+TGG 0.576999 4_1:+56344971 None:intergenic
GGAGCTGGTGTTGTGTGAGG+AGG 0.590088 4_1:+56347494 None:intergenic
TAAAAGTAGCAATATTGCAA+GGG 0.590364 4_1:+56347577 None:intergenic
AGTGGAGCTGGTGTTGTGTG+AGG 0.593333 4_1:+56347491 None:intergenic
TTGGTGGTTTAGCAGGTACG+GGG 0.596856 4_1:+56347330 None:intergenic
GTGTGAATAGGAGAAGGAGT+AGG 0.597611 4_1:+56347380 None:intergenic
GGGGATGAGTTGGAACAACA+GGG 0.598634 4_1:+56347207 None:intergenic
GAGCAGGTGGGTGTAATGGA+GGG 0.598759 4_1:+56347159 None:intergenic
AAGTAACCCTAGAAAGAGAG+AGG 0.599079 4_1:+56347629 None:intergenic
TCTTCCCTTTATTCTCTACA+CGG 0.602477 4_1:-56344796 Msa0557850:CDS
TCACCCACCAACTAAGTCAC+CGG 0.603018 4_1:-56347468 Msa0557850:CDS
CACCGGTAAGACCACCATGA+AGG 0.605543 4_1:+56344856 None:intergenic
CAACAACACAAAGTACAAGT+TGG 0.607796 4_1:-56345009 Msa0557850:CDS
ATGGTAAGGAGGGTGTAGAG+GGG 0.618924 4_1:+56347358 None:intergenic
AGACCACCATGAAGGTTCGA+AGG 0.625392 4_1:+56344864 None:intergenic
GAGAAGCCATTTGTGGCGAA+GGG 0.631406 4_1:-56344819 Msa0557850:CDS
TTATGAGAGAGTGTGAGTGA+GGG 0.631870 4_1:+56347672 None:intergenic
GTGCTGGAGCAACAGGTGTG+TGG 0.635755 4_1:+56347258 None:intergenic
CAGCTATAAAGCTTCTAGGG+AGG 0.636143 4_1:+56347108 None:intergenic
TGAACCGGTGACTTAGTTGG+TGG 0.638462 4_1:+56347464 None:intergenic
GAACCGGTGACTTAGTTGGT+GGG 0.644946 4_1:+56347465 None:intergenic
CAACAGGGGTGTGAACAGGT+GGG 0.648196 4_1:+56347222 None:intergenic
GGGTTGGTGAGTGAATGTGG+TGG 0.650934 4_1:+56347408 None:intergenic
ACCCAGACCACTGATAAGAA+CGG 0.652681 4_1:-56344978 Msa0557850:CDS
CCTGCTAAACCACCAACTCA+CGG 0.657475 4_1:-56347323 Msa0557850:CDS
CATTTGGGCTCAAATGCAAG+AGG 0.670426 4_1:+56344768 None:intergenic
GGACTGGGGAAGGAGCAGGA+GGG 0.674543 4_1:+56347279 None:intergenic
TGGTGGTTTAGCAGGTACGG+GGG 0.676103 4_1:+56347331 None:intergenic
GTTGCATTGAAGCTTCACAA+CGG 0.689892 4_1:+56345028 None:intergenic
AGCAACAGGTGTGTGGACTG+GGG 0.697477 4_1:+56347265 None:intergenic
GGGATGAGTTGGAACAACAG+GGG 0.726853 4_1:+56347208 None:intergenic
AAGCCTTCGAACCTTCATGG+TGG 0.750456 4_1:-56344867 Msa0557850:CDS
TGTGTGAGGAGGGTAAGTTG+GGG 0.787508 4_1:+56347505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATGTACTTAATATTTTA+TGG - chr4_1:56345959-56345978 Msa0557850:intron 10.0%
!!! TAATGTACTTAATATTTTAT+GGG - chr4_1:56345960-56345979 Msa0557850:intron 10.0%
!! GATATTTATACAATAAAATA+TGG + chr4_1:56346166-56346185 None:intergenic 10.0%
!!! AAATATAAAAAATTTGGTTT+TGG - chr4_1:56346442-56346461 Msa0557850:intron 10.0%
!!! TTAAGTTATTTTAAATCATT+AGG + chr4_1:56346796-56346815 None:intergenic 10.0%
!! TATTAGATGAACAAAAAAAT+GGG + chr4_1:56345513-56345532 None:intergenic 15.0%
!! ATATTAGATGAACAAAAAAA+TGG + chr4_1:56345514-56345533 None:intergenic 15.0%
!!! ATGTTGTGAAATTATTTTTT+AGG - chr4_1:56345887-56345906 Msa0557850:intron 15.0%
!! CAAATATAGAAAAAACTTAT+TGG - chr4_1:56346022-56346041 Msa0557850:intron 15.0%
!!! CTCAAAAAAATATTTTTACA+GGG + chr4_1:56346410-56346429 None:intergenic 15.0%
!!! ACTCAAAAAAATATTTTTAC+AGG + chr4_1:56346411-56346430 None:intergenic 15.0%
!!! AATTTTTTAATCTGAAGAAA+GGG - chr4_1:56346538-56346557 Msa0557850:intron 15.0%
!!! AAGAAATAGAGTATATTTTA+AGG - chr4_1:56346744-56346763 Msa0557850:intron 15.0%
!!! ATAATAGTACATTATTTTGT+TGG - chr4_1:56346982-56347001 Msa0557850:intron 15.0%
!!! TAATAGTACATTATTTTGTT+GGG - chr4_1:56346983-56347002 Msa0557850:intron 15.0%
!! TTTCAAAATACATAAAATGA+TGG + chr4_1:56347065-56347084 None:intergenic 15.0%
!! TTGAATTGAACTATGAATAT+TGG - chr4_1:56345319-56345338 Msa0557850:intron 20.0%
!! AAGAAAAATCTAGACATATA+TGG + chr4_1:56345544-56345563 None:intergenic 20.0%
!! TAAACTTTGGATTTGAAAAA+GGG + chr4_1:56345637-56345656 None:intergenic 20.0%
!! TCCAAAGTTTAGAAAAATAT+TGG - chr4_1:56345646-56345665 Msa0557850:intron 20.0%
!!! ACCAATATTTTTCTAAACTT+TGG + chr4_1:56345650-56345669 None:intergenic 20.0%
!!! TAGAAAAAGTTTCTTCTTTT+AGG - chr4_1:56346101-56346120 Msa0557850:intron 20.0%
!!! AAAGTGAGTATTTTTCTATT+AGG + chr4_1:56346229-56346248 None:intergenic 20.0%
!! TAAAATGTCAGATATTTACA+GGG + chr4_1:56346379-56346398 None:intergenic 20.0%
!!! CCAAATTTTTTATATTTGCA+GGG + chr4_1:56346439-56346458 None:intergenic 20.0%
!!! ACCAAATTTTTTATATTTGC+AGG + chr4_1:56346440-56346459 None:intergenic 20.0%
!!! CAATATGAATCAATTTTACA+AGG + chr4_1:56346489-56346508 None:intergenic 20.0%
!!! CTTGTAAAATTGATTCATAT+TGG - chr4_1:56346487-56346506 Msa0557850:intron 20.0%
!! TTGAAATTGAAATAGAGTTA+TGG - chr4_1:56346512-56346531 Msa0557850:intron 20.0%
!! TGAAATTGAAATAGAGTTAT+GGG - chr4_1:56346513-56346532 Msa0557850:intron 20.0%
!!! CAATTTTTTAATCTGAAGAA+AGG - chr4_1:56346537-56346556 Msa0557850:intron 20.0%
!!! GCTTTTGAATAAATATTTGT+TGG + chr4_1:56346629-56346648 None:intergenic 20.0%
!!! AATATACTCTATTTCTTCAT+GGG + chr4_1:56346741-56346760 None:intergenic 20.0%
!!! AAATATACTCTATTTCTTCA+TGG + chr4_1:56346742-56346761 None:intergenic 20.0%
!! TTAATCATTGTTTGCAATTA+AGG - chr4_1:56346849-56346868 Msa0557850:intron 20.0%
!! TAATCATTGTTTGCAATTAA+GGG - chr4_1:56346850-56346869 Msa0557850:intron 20.0%
!!! TTTTATTTCTTTACCATTCT+TGG + chr4_1:56346910-56346929 None:intergenic 20.0%
!!! GTATTTTGAAATTGAATTGT+AGG - chr4_1:56347074-56347093 Msa0557850:CDS 20.0%
!!! ATAAACCCTAATTTTCTTAA+CGG + chr4_1:56347388-56347407 None:intergenic 20.0%
! TAAAAGTAGCAATATTGCAA+GGG + chr4_1:56344553-56344572 None:intergenic 25.0%
! CTAAAAAGGGAATAATTGTT+AGG + chr4_1:56345439-56345458 None:intergenic 25.0%
!! CTAACAATTATTCCCTTTTT+AGG - chr4_1:56345437-56345456 Msa0557850:intron 25.0%
! ATCACAGATAAACCTAAAAA+GGG + chr4_1:56345452-56345471 None:intergenic 25.0%
! CTAAACTTTGGATTTGAAAA+AGG + chr4_1:56345638-56345657 None:intergenic 25.0%
!!! TCATTTTTTTTGACAAGTCA+TGG + chr4_1:56345745-56345764 None:intergenic 25.0%
!!! TGCTTACATGTGTTTTTTTA+GGG + chr4_1:56345804-56345823 None:intergenic 25.0%
!!! TTGCTTACATGTGTTTTTTT+AGG + chr4_1:56345805-56345824 None:intergenic 25.0%
! AGTAGTACTACGTTAAAATA+TGG + chr4_1:56345924-56345943 None:intergenic 25.0%
! CTAAAATGTCAGATATTTAC+AGG + chr4_1:56346380-56346399 None:intergenic 25.0%
! CCCTGCAAATATAAAAAATT+TGG - chr4_1:56346436-56346455 Msa0557850:intron 25.0%
! AGGACTAAAACAAAATATCA+AGG + chr4_1:56346469-56346488 None:intergenic 25.0%
! GTGCAATATTGTACATATTA+AGG - chr4_1:56346573-56346592 Msa0557850:intron 25.0%
! CAATGAAAAATTACTACTCT+TGG + chr4_1:56346602-56346621 None:intergenic 25.0%
! AACAATGATTAAAGTTTCTC+CGG + chr4_1:56346841-56346860 None:intergenic 25.0%
!!! AACGGTTATTTTTTCATTGA+AGG - chr4_1:56347167-56347186 Msa0557850:CDS 25.0%
!! TAAACCCTAATTTTCTTAAC+GGG + chr4_1:56347387-56347406 None:intergenic 25.0%
!!! GTTTTTTAGTGTTAAGAGAT+TGG - chr4_1:56347434-56347453 Msa0557850:CDS 25.0%
!!! TTCTCAGAAACTATTTTAGT+TGG - chr4_1:56347631-56347650 Msa0557850:five_prime_UTR 25.0%
!!! TCTCAGAAACTATTTTAGTT+GGG - chr4_1:56347632-56347651 Msa0557850:five_prime_UTR 25.0%
!!! AACTATTTTAGTTGGGTATA+CGG - chr4_1:56347639-56347658 Msa0557850:five_prime_UTR 25.0%
! TCTCTTACACTTTGAGAAAA+TGG - chr4_1:56344521-56344540 Msa0557850:three_prime_UTR 30.0%
GTAAAAGTAGCAATATTGCA+AGG + chr4_1:56344554-56344573 None:intergenic 30.0%
TCATAGTTCAATTCAAACAG+TGG + chr4_1:56345315-56345334 None:intergenic 30.0%
CATCACAGATAAACCTAAAA+AGG + chr4_1:56345453-56345472 None:intergenic 30.0%
! TTTAGGTTTATCTGTGATGT+TGG - chr4_1:56345454-56345473 Msa0557850:intron 30.0%
TTAGGTTTATCTGTGATGTT+GGG - chr4_1:56345455-56345474 Msa0557850:intron 30.0%
AAGACAAGAAAAATAGTGGT+GGG + chr4_1:56345591-56345610 None:intergenic 30.0%
!! TGAAAAAGGGTATTCAATCT+TGG + chr4_1:56345624-56345643 None:intergenic 30.0%
AGTACTACGTTAAAATATGG+AGG + chr4_1:56345921-56345940 None:intergenic 30.0%
!! ATCATTAATTTGTGCCTTGA+GGG + chr4_1:56346001-56346020 None:intergenic 30.0%
!! AATCATTAATTTGTGCCTTG+AGG + chr4_1:56346002-56346021 None:intergenic 30.0%
AATATCTCTAGATCGTAGTA+CGG - chr4_1:56346180-56346199 Msa0557850:intron 30.0%
TTAAAGTAGCAACTTTGACT+TGG + chr4_1:56346680-56346699 None:intergenic 30.0%
ACAATGATTAAAGTTTCTCC+GGG + chr4_1:56346840-56346859 None:intergenic 30.0%
CGTTGTCATATCAATGTAAA+AGG + chr4_1:56347010-56347029 None:intergenic 30.0%
AAAATAACCGTTCTTATCAG+TGG + chr4_1:56347159-56347178 None:intergenic 30.0%
! AAACCCTAATTTTCTTAACG+GGG + chr4_1:56347386-56347405 None:intergenic 30.0%
TCCACTTTCGTGTTAAATTA+TGG - chr4_1:56347459-56347478 Msa0557850:CDS 30.0%
ACCATAATTTAACACGAAAG+TGG + chr4_1:56347463-56347482 None:intergenic 30.0%
TCGTGTTAAATTATGGTGTT+TGG - chr4_1:56347466-56347485 Msa0557850:CDS 30.0%
! CAAGACAATTTTCTAAGTAC+AGG + chr4_1:56347604-56347623 None:intergenic 30.0%
!!! ACTATTTTAGTTGGGTATAC+GGG - chr4_1:56347640-56347659 Msa0557850:five_prime_UTR 30.0%
GAACAGCTATAAAGCTTCTA+GGG + chr4_1:56345025-56345044 None:intergenic 35.0%
TGAACAGCTATAAAGCTTCT+AGG + chr4_1:56345026-56345045 None:intergenic 35.0%
! AGAAGCTTTATAGCTGTTCA+AGG - chr4_1:56345026-56345045 Msa0557850:CDS 35.0%
CCATTAATCTCGTAGATCTA+CGG + chr4_1:56345397-56345416 None:intergenic 35.0%
TAGGTTTATCTGTGATGTTG+GGG - chr4_1:56345456-56345475 Msa0557850:intron 35.0%
CAAGACAAGAAAAATAGTGG+TGG + chr4_1:56345592-56345611 None:intergenic 35.0%
!! CACCACTATTTTTCTTGTCT+TGG - chr4_1:56345590-56345609 Msa0557850:intron 35.0%
GACCAAGACAAGAAAAATAG+TGG + chr4_1:56345595-56345614 None:intergenic 35.0%
!! GGGTATTCAATCTTGGTTTT+TGG + chr4_1:56345617-56345636 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG - chr4_1:56346124-56346143 Msa0557850:intron 35.0%
! AACTTTTCGAACTCGAGAAT+AGG + chr4_1:56346282-56346301 None:intergenic 35.0%
CGTAAAAAAGTTATGTTCCC+CGG - chr4_1:56346819-56346838 Msa0557850:intron 35.0%
CAATGATTAAAGTTTCTCCG+GGG + chr4_1:56346839-56346858 None:intergenic 35.0%
CTAAAACGACAAAGTAGCTT+TGG + chr4_1:56346943-56346962 None:intergenic 35.0%
!! AGTGTCGTTTAGCAACAAAA+AGG + chr4_1:56347040-56347059 None:intergenic 35.0%
CAACAACACAAAGTACAAGT+TGG - chr4_1:56347118-56347137 Msa0557850:CDS 35.0%
! TTCGAAGGCTTTAATCCATT+CGG + chr4_1:56347251-56347270 None:intergenic 35.0%
TCTTCCCTTTATTCTCTACA+CGG - chr4_1:56347331-56347350 Msa0557850:CDS 35.0%
! TTTTCTTAACGGGGACATTT+GGG + chr4_1:56347377-56347396 None:intergenic 35.0%
! ATTTTCTTAACGGGGACATT+TGG + chr4_1:56347378-56347397 None:intergenic 35.0%
ATGTCCCCGTTAAGAAAATT+AGG - chr4_1:56347379-56347398 Msa0557850:CDS 35.0%
TGTCCCCGTTAAGAAAATTA+GGG - chr4_1:56347380-56347399 Msa0557850:CDS 35.0%
! GTGAGTGAGGGTTGATTTAT+AGG + chr4_1:56344446-56344465 None:intergenic 40.0%
! TTATGAGAGAGTGTGAGTGA+GGG + chr4_1:56344458-56344477 None:intergenic 40.0%
AAGTAACCCTAGAAAGAGAG+AGG + chr4_1:56344501-56344520 None:intergenic 40.0%
! AGCTATAAAGCTTCTAGGGA+GGG + chr4_1:56345021-56345040 None:intergenic 40.0%
GTCAAATCTTGCAAGTATGC+TGG - chr4_1:56345059-56345078 Msa0557850:intron 40.0%
!!! TGCTGGTGTTGATACTCTTT+TGG - chr4_1:56345076-56345095 Msa0557850:intron 40.0%
!!! GCTGGTGTTGATACTCTTTT+GGG - chr4_1:56345077-56345096 Msa0557850:intron 40.0%
TTGGGAGCTACTCAAATTCT+TGG - chr4_1:56345095-56345114 Msa0557850:intron 40.0%
CCGTAGATCTACGAGATTAA+TGG - chr4_1:56345394-56345413 Msa0557850:intron 40.0%
AGGTTTATCTGTGATGTTGG+GGG - chr4_1:56345457-56345476 Msa0557850:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr4_1:56345984-56346003 Msa0557850:intron 40.0%
GTTTCTTAACATGTGCCCTA+AGG - chr4_1:56346123-56346142 Msa0557850:intron 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG + chr4_1:56346141-56346160 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG + chr4_1:56346142-56346161 None:intergenic 40.0%
TTGCAATTAAGGGAACAGTG+TGG - chr4_1:56346860-56346879 Msa0557850:intron 40.0%
GTGGATTTGTGTGTTAAGAG+AGG - chr4_1:56346879-56346898 Msa0557850:intron 40.0%
AAGAGAGGAGAATCCAAGAA+TGG - chr4_1:56346894-56346913 Msa0557850:intron 40.0%
GTTGCATTGAAGCTTCACAA+CGG + chr4_1:56347102-56347121 None:intergenic 40.0%
!!! TATCAGTGGTCTGGGTTTTT+TGG + chr4_1:56347145-56347164 None:intergenic 40.0%
! GCATAGCTTGTGATGTTCTT+TGG + chr4_1:56347194-56347213 None:intergenic 40.0%
TTAAAGCCTTCGAACCTTCA+TGG - chr4_1:56347257-56347276 Msa0557850:CDS 40.0%
CCAACCGTGTAGAGAATAAA+GGG + chr4_1:56347338-56347357 None:intergenic 40.0%
TCCAACCGTGTAGAGAATAA+AGG + chr4_1:56347339-56347358 None:intergenic 40.0%
! GTTATGAGAGAGTGTGAGTG+AGG + chr4_1:56344459-56344478 None:intergenic 45.0%
AGAGGAAGAGGATGTGATGT+TGG + chr4_1:56344483-56344502 None:intergenic 45.0%
TCCTCTTCCTCTCTCTTTCT+AGG - chr4_1:56344491-56344510 Msa0557850:three_prime_UTR 45.0%
CCTCTTCCTCTCTCTTTCTA+GGG - chr4_1:56344492-56344511 Msa0557850:three_prime_UTR 45.0%
TTGTGTGAGGAGGGTAAGTT+GGG + chr4_1:56344626-56344645 None:intergenic 45.0%
GTGTGAATAGGAGAAGGAGT+AGG + chr4_1:56344750-56344769 None:intergenic 45.0%
! AATGGTAAGGAGGGTGTAGA+GGG + chr4_1:56344773-56344792 None:intergenic 45.0%
!! AGTTGGTGGTTTAGCAGGTA+CGG + chr4_1:56344802-56344821 None:intergenic 45.0%
! TTGGAACAGGAGGGTGTAAT+GGG + chr4_1:56344944-56344963 None:intergenic 45.0%
! GCTATAAAGCTTCTAGGGAG+GGG + chr4_1:56345020-56345039 None:intergenic 45.0%
! CAGCTATAAAGCTTCTAGGG+AGG + chr4_1:56345022-56345041 None:intergenic 45.0%
ATCGTAGTACGGCAGTACTT+TGG - chr4_1:56346191-56346210 Msa0557850:intron 45.0%
TCGTAGTACGGCAGTACTTT+GGG - chr4_1:56346192-56346211 Msa0557850:intron 45.0%
ACCCAGACCACTGATAAGAA+CGG - chr4_1:56347149-56347168 Msa0557850:CDS 45.0%
ACCGTTCTTATCAGTGGTCT+GGG + chr4_1:56347153-56347172 None:intergenic 45.0%
AACCGTTCTTATCAGTGGTC+TGG + chr4_1:56347154-56347173 None:intergenic 45.0%
!! GTTTTAGTCAGTGCACCGAA+TGG - chr4_1:56347233-56347252 Msa0557850:CDS 45.0%
! AACCTTCATGGTGGTCTTAC+CGG - chr4_1:56347269-56347288 Msa0557850:CDS 45.0%
CCCTTTATTCTCTACACGGT+TGG - chr4_1:56347335-56347354 Msa0557850:CDS 45.0%
CATTTGGGCTCAAATGCAAG+AGG + chr4_1:56347362-56347381 None:intergenic 45.0%
!! ATATTTATACAATAAAATAT+GGG + chr4_1:56346165-56346184 None:intergenic 5.0%
CCCTAGAAAGAGAGAGGAAG+AGG + chr4_1:56344495-56344514 None:intergenic 50.0%
TGTGTGAGGAGGGTAAGTTG+GGG + chr4_1:56344625-56344644 None:intergenic 50.0%
GTTGTGTGAGGAGGGTAAGT+TGG + chr4_1:56344627-56344646 None:intergenic 50.0%
!! GACTTAGTTGGTGGGTGAAG+TGG + chr4_1:56344657-56344676 None:intergenic 50.0%
TCACCCACCAACTAAGTCAC+CGG - chr4_1:56344659-56344678 Msa0557850:three_prime_UTR 50.0%
GAACCGGTGACTTAGTTGGT+GGG + chr4_1:56344665-56344684 None:intergenic 50.0%
TGAACCGGTGACTTAGTTGG+TGG + chr4_1:56344666-56344685 None:intergenic 50.0%
!! AGTGAATGTGGTGGTGGTGA+TGG + chr4_1:56344713-56344732 None:intergenic 50.0%
TTGGTGAGTGAATGTGGTGG+TGG + chr4_1:56344719-56344738 None:intergenic 50.0%
TAGGAGAAGGAGTAGGAGCA+GGG + chr4_1:56344743-56344762 None:intergenic 50.0%
ATAGGAGAAGGAGTAGGAGC+AGG + chr4_1:56344744-56344763 None:intergenic 50.0%
! AGAGGGGTGTGAATAGGAGA+AGG + chr4_1:56344756-56344775 None:intergenic 50.0%
! ATGGTAAGGAGGGTGTAGAG+GGG + chr4_1:56344772-56344791 None:intergenic 50.0%
! GAATGGTAAGGAGGGTGTAG+AGG + chr4_1:56344774-56344793 None:intergenic 50.0%
! TTGGTGGTTTAGCAGGTACG+GGG + chr4_1:56344800-56344819 None:intergenic 50.0%
!! GTTGGTGGTTTAGCAGGTAC+GGG + chr4_1:56344801-56344820 None:intergenic 50.0%
CCTGCTAAACCACCAACTCA+CGG - chr4_1:56344804-56344823 Msa0557850:CDS 50.0%
! GGGATGAGTTGGAACAACAG+GGG + chr4_1:56344922-56344941 None:intergenic 50.0%
! GGGGATGAGTTGGAACAACA+GGG + chr4_1:56344923-56344942 None:intergenic 50.0%
! TGGAACAGGAGGGTGTAATG+GGG + chr4_1:56344943-56344962 None:intergenic 50.0%
! GTTGGAACAGGAGGGTGTAA+TGG + chr4_1:56344945-56344964 None:intergenic 50.0%
! AATGGAGGGTGAGTTGGAAC+AGG + chr4_1:56344957-56344976 None:intergenic 50.0%
!! TGTGATGTTGGGGGTACTCT+TGG - chr4_1:56345466-56345485 Msa0557850:intron 50.0%
!! GTGATGTTGGGGGTACTCTT+GGG - chr4_1:56345467-56345486 Msa0557850:intron 50.0%
AGTACGGCAGTACTTTGGGT+AGG - chr4_1:56346196-56346215 Msa0557850:intron 50.0%
GTACGGCAGTACTTTGGGTA+GGG - chr4_1:56346197-56346216 Msa0557850:intron 50.0%
TACGGCAGTACTTTGGGTAG+GGG - chr4_1:56346198-56346217 Msa0557850:intron 50.0%
AAGCCTTCGAACCTTCATGG+TGG - chr4_1:56347260-56347279 Msa0557850:CDS 50.0%
AGACCACCATGAAGGTTCGA+AGG + chr4_1:56347266-56347285 None:intergenic 50.0%
TTCGCCACAAATGGCTTCTC+GGG + chr4_1:56347308-56347327 None:intergenic 50.0%
CTTCGCCACAAATGGCTTCT+CGG + chr4_1:56347309-56347328 None:intergenic 50.0%
GAGAAGCCATTTGTGGCGAA+GGG - chr4_1:56347308-56347327 Msa0557850:CDS 50.0%
!! GAGCTGGTGTTGTGTGAGGA+GGG + chr4_1:56344635-56344654 None:intergenic 55.0%
!! AGTGGAGCTGGTGTTGTGTG+AGG + chr4_1:56344639-56344658 None:intergenic 55.0%
GGGTGAACCGGTGACTTAGT+TGG + chr4_1:56344669-56344688 None:intergenic 55.0%
!! TAAGTCACCGGTTCACCCAC+CGG - chr4_1:56344671-56344690 Msa0557850:three_prime_UTR 55.0%
!! GAATGTGGTGGTGGTGATGG+TGG + chr4_1:56344710-56344729 None:intergenic 55.0%
!! GGGTTGGTGAGTGAATGTGG+TGG + chr4_1:56344722-56344741 None:intergenic 55.0%
!! CAGGGGTTGGTGAGTGAATG+TGG + chr4_1:56344725-56344744 None:intergenic 55.0%
AGGAGAAGGAGTAGGAGCAG+GGG + chr4_1:56344742-56344761 None:intergenic 55.0%
! GGGTGTAGAGGGGTGTGAAT+AGG + chr4_1:56344762-56344781 None:intergenic 55.0%
CGGGGGTAGAATGGTAAGGA+GGG + chr4_1:56344782-56344801 None:intergenic 55.0%
ACGGGGGTAGAATGGTAAGG+AGG + chr4_1:56344783-56344802 None:intergenic 55.0%
GGTACGGGGGTAGAATGGTA+AGG + chr4_1:56344786-56344805 None:intergenic 55.0%
TAGCAGGTACGGGGGTAGAA+TGG + chr4_1:56344791-56344810 None:intergenic 55.0%
TGGTGGTTTAGCAGGTACGG+GGG + chr4_1:56344799-56344818 None:intergenic 55.0%
!! CCGTGAGTTGGTGGTTTAGC+AGG + chr4_1:56344807-56344826 None:intergenic 55.0%
! AGCAACAGGTGTGTGGACTG+GGG + chr4_1:56344865-56344884 None:intergenic 55.0%
GAGCAACAGGTGTGTGGACT+GGG + chr4_1:56344866-56344885 None:intergenic 55.0%
TGAACAGGTGGGTGTAGTGG+TGG + chr4_1:56344897-56344916 None:intergenic 55.0%
GTGTGAACAGGTGGGTGTAG+TGG + chr4_1:56344900-56344919 None:intergenic 55.0%
! CAACAGGGGTGTGAACAGGT+GGG + chr4_1:56344908-56344927 None:intergenic 55.0%
! ACAACAGGGGTGTGAACAGG+TGG + chr4_1:56344909-56344928 None:intergenic 55.0%
! GGAACAACAGGGGTGTGAAC+AGG + chr4_1:56344912-56344931 None:intergenic 55.0%
! GGGGGATGAGTTGGAACAAC+AGG + chr4_1:56344924-56344943 None:intergenic 55.0%
! GGGTGTAATGGGGGATGAGT+TGG + chr4_1:56344933-56344952 None:intergenic 55.0%
! GGAACAGGAGGGTGTAATGG+GGG + chr4_1:56344942-56344961 None:intergenic 55.0%
! GAGGGTGAGTTGGAACAGGA+GGG + chr4_1:56344953-56344972 None:intergenic 55.0%
! GGGTGTAATGGAGGGTGAGT+TGG + chr4_1:56344963-56344982 None:intergenic 55.0%
! GAGCAGGTGGGTGTAATGGA+GGG + chr4_1:56344971-56344990 None:intergenic 55.0%
GGGGTGTAGGATGCAATGGT+GGG + chr4_1:56345001-56345020 None:intergenic 55.0%
! AGGGGTGTAGGATGCAATGG+TGG + chr4_1:56345002-56345021 None:intergenic 55.0%
! AAGCTTCTAGGGAGGGGTGT+AGG + chr4_1:56345014-56345033 None:intergenic 55.0%
CACCGGTAAGACCACCATGA+AGG + chr4_1:56347274-56347293 None:intergenic 55.0%
!! GTCTTACCGGTGCTGGTCTT+AGG - chr4_1:56347282-56347301 Msa0557850:CDS 55.0%
TAGGCCCGAGAAGCCATTTG+TGG - chr4_1:56347301-56347320 Msa0557850:CDS 55.0%
CGAGAAGCCATTTGTGGCGA+AGG - chr4_1:56347307-56347326 Msa0557850:CDS 55.0%
GGAAGACCCTTCGCCACAAA+TGG + chr4_1:56347317-56347336 None:intergenic 55.0%
!! GGAGCTGGTGTTGTGTGAGG+AGG + chr4_1:56344636-56344655 None:intergenic 60.0%
! GTTGGTGGGTGAAGTGGAGC+TGG + chr4_1:56344651-56344670 None:intergenic 60.0%
!! GTGGTGGTGATGGTGGTGAG+GGG + chr4_1:56344703-56344722 None:intergenic 60.0%
!! GGTGGTGGTGATGGTGGTGA+GGG + chr4_1:56344704-56344723 None:intergenic 60.0%
!! TGGTGGTGGTGATGGTGGTG+AGG + chr4_1:56344705-56344724 None:intergenic 60.0%
GAAGGAGTAGGAGCAGGGGT+TGG + chr4_1:56344738-56344757 None:intergenic 60.0%
!! GGTGAGGATGATGGTGGTGG+TGG + chr4_1:56344830-56344849 None:intergenic 60.0%
!! GAGGGTGAGGATGATGGTGG+TGG + chr4_1:56344833-56344852 None:intergenic 60.0%
! CAGGAGGGTGAGGATGATGG+TGG + chr4_1:56344836-56344855 None:intergenic 60.0%
GAGCAGGAGGGTGAGGATGA+TGG + chr4_1:56344839-56344858 None:intergenic 60.0%
!! ACAGGTGTGTGGACTGGGGA+AGG + chr4_1:56344861-56344880 None:intergenic 60.0%
GGAGCAACAGGTGTGTGGAC+TGG + chr4_1:56344867-56344886 None:intergenic 60.0%
GTGCTGGAGCAACAGGTGTG+TGG + chr4_1:56344872-56344891 None:intergenic 60.0%
GGTGGATGTGCTGGAGCAAC+AGG + chr4_1:56344879-56344898 None:intergenic 60.0%
!! GGGTGTAGTGGTGGATGTGC+TGG + chr4_1:56344888-56344907 None:intergenic 60.0%
! GGAGGGTGAGTTGGAACAGG+AGG + chr4_1:56344954-56344973 None:intergenic 60.0%
GGAGCAGGTGGGTGTAATGG+AGG + chr4_1:56344972-56344991 None:intergenic 60.0%
GCTGGAGCAGGTGGGTGTAA+TGG + chr4_1:56344975-56344994 None:intergenic 60.0%
!! AATGGTGGGTGTGCTGGAGC+AGG + chr4_1:56344987-56345006 None:intergenic 60.0%
!! GGATGCAATGGTGGGTGTGC+TGG + chr4_1:56344993-56345012 None:intergenic 60.0%
! GGGAGGGGTGTAGGATGCAA+TGG + chr4_1:56345005-56345024 None:intergenic 60.0%
! CATGGTGGTCTTACCGGTGC+TGG - chr4_1:56347275-56347294 Msa0557850:CDS 60.0%
GCGTTAGCCGGTGGGTGAAC+CGG + chr4_1:56344681-56344700 None:intergenic 65.0%
!! TGGTGGTGAGGGGCGTTAGC+CGG + chr4_1:56344693-56344712 None:intergenic 65.0%
!! TGGTGGTGGCCGTGAGTTGG+TGG + chr4_1:56344816-56344835 None:intergenic 65.0%
!! TGGTGGTGGTGGCCGTGAGT+TGG + chr4_1:56344819-56344838 None:intergenic 65.0%
GGACTGGGGAAGGAGCAGGA+GGG + chr4_1:56344851-56344870 None:intergenic 65.0%
! TGGACTGGGGAAGGAGCAGG+AGG + chr4_1:56344852-56344871 None:intergenic 65.0%
!! GTGTGGACTGGGGAAGGAGC+AGG + chr4_1:56344855-56344874 None:intergenic 65.0%
GTGGGTGTGCTGGAGCAGGT+GGG + chr4_1:56344983-56345002 None:intergenic 65.0%
CTCGGGCCTAAGACCAGCAC+CGG + chr4_1:56347291-56347310 None:intergenic 65.0%
!! GGTGAGGGGCGTTAGCCGGT+GGG + chr4_1:56344689-56344708 None:intergenic 70.0%
!! TGGTGAGGGGCGTTAGCCGG+TGG + chr4_1:56344690-56344709 None:intergenic 70.0%
GGGGAAGGAGCAGGAGGGTG+AGG + chr4_1:56344846-56344865 None:intergenic 70.0%
GGTGGGTGTGCTGGAGCAGG+TGG + chr4_1:56344984-56345003 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 56344421 56347728 56344421 ID=Msa0557850;Name=Msa0557850
chr4_1 mRNA 56344421 56347728 56344421 ID=Msa0557850-mRNA-1;Parent=Msa0557850;Name=Msa0557850-mRNA-1;_AED=0.28;_eAED=0.28;_QI=119|1|1|1|1|1|2|337|290
chr4_1 exon 56344421 56345053 56344421 ID=Msa0557850-mRNA-1:exon:16896;Parent=Msa0557850-mRNA-1
chr4_1 exon 56347033 56347728 56347033 ID=Msa0557850-mRNA-1:exon:16895;Parent=Msa0557850-mRNA-1
chr4_1 five_prime_UTR 56347610 56347728 56347610 ID=Msa0557850-mRNA-1:five_prime_utr;Parent=Msa0557850-mRNA-1
chr4_1 CDS 56347033 56347609 56347033 ID=Msa0557850-mRNA-1:cds;Parent=Msa0557850-mRNA-1
chr4_1 CDS 56344758 56345053 56344758 ID=Msa0557850-mRNA-1:cds;Parent=Msa0557850-mRNA-1
chr4_1 three_prime_UTR 56344421 56344757 56344421 ID=Msa0557850-mRNA-1:three_prime_utr;Parent=Msa0557850-mRNA-1
Gene Sequence

>Msa0557850

ATGGCTAAAACCCTTGCAATATTGCTACTTTTACTTCAACTCACTTCTTTCACTGCATTTTCTGAAGAGCTTGAAACTCTTACCCCAACTTACCCTCCTCACACAACACCAGCTCCACTTCACCCACCAACTAAGTCACCGGTTCACCCACCGGCTAACGCCCCTCACCACCATCACCACCACCACATTCACTCACCAACCCCTGCTCCTACTCCTTCTCCTATTCACACCCCTCTACACCCTCCTTACCATTCTACCCCCGTACCTGCTAAACCACCAACTCACGGCCACCACCACCATCATCCTCACCCTCCTGCTCCTTCCCCAGTCCACACACCTGTTGCTCCAGCACATCCACCACTACACCCACCTGTTCACACCCCTGTTGTTCCAACTCATCCCCCATTACACCCTCCTGTTCCAACTCACCCTCCATTACACCCACCTGCTCCAGCACACCCACCATTGCATCCTACACCCCTCCCTAGAAGCTTTATAGCTGTTCAAGGTGTTGTTTATGTCAAATCTTGCAAGTATGCTGGTGTTGATACTCTTTTGGGAGCTACTCAAATTCTTGGAGCCGTTGTGAAGCTTCAATGCAACAACACAAAGTACAAGTTGGTCCAAAAAACCCAGACCACTGATAAGAACGGTTATTTTTTCATTGAAGGACCAAAGAACATCACAAGCTATGCAGCTCATAAGTGCAACATTGTTTTAGTCAGTGCACCGAATGGATTAAAGCCTTCGAACCTTCATGGTGGTCTTACCGGTGCTGGTCTTAGGCCCGAGAAGCCATTTGTGGCGAAGGGTCTTCCCTTTATTCTCTACACGGTTGGACCTCTTGCATTTGAGCCCAAATGTCCCCGTTAA
Protein sequence

>Msa0557850

MAKTLAILLLLLQLTSFTAFSEELETLTPTYPPHTTPAPLHPPTKSPVHPPANAPHHHHHHHIHSPTPAPTPSPIHTPLHPPYHSTPVPAKPPTHGHHHHHPHPPAPSPVHTPVAPAHPPLHPPVHTPVVPTHPPLHPPVPTHPPLHPPAPAHPPLHPTPLPRSFIAVQGVVYVKSCKYAGVDTLLGATQILGAVVKLQCNNTKYKLVQKTQTTDKNGYFFIEGPKNITSYAAHKCNIVLVSAPNGLKPSNLHGGLTGAGLRPEKPFVAKGLPFILYTVGPLAFEPKCPR*