AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829060 MtrunA17_Chr3g0137261 90.397 479 34 3 504 970 1 479 0.0 843
Msa0829060 MtrunA17_Chr3g0137261 84.375 448 36 4 82 495 1 448 0.0 711
Msa0829060 MtrunA17_Chr3g0137261 91.304 69 6 0 1 69 399 467 4.40e-36 143
Msa0829060 MtrunA17_Chr3g0137321 88.050 477 45 3 506 970 1 477 0.0 842
Msa0829060 MtrunA17_Chr3g0137321 92.152 446 1 4 84 495 1 446 0.0 795
Msa0829060 MtrunA17_Chr3g0137321 95.652 69 3 0 1 69 397 465 1.37e-37 147
Msa0829060 MtrunA17_Chr3g0137341 89.518 477 34 5 506 970 1 473 0.0 821
Msa0829060 MtrunA17_Chr3g0137341 86.547 446 22 6 84 495 1 442 0.0 715
Msa0829060 MtrunA17_Chr3g0137341 89.855 69 3 2 1 69 397 461 2.22e-31 129
Msa0829060 MtrunA17_Chr1g0192071 88.935 479 33 4 504 970 1 471 0.0 821
Msa0829060 MtrunA17_Chr1g0192071 81.250 448 42 5 82 495 1 440 0.0 667
Msa0829060 MtrunA17_Chr1g0192071 79.710 69 6 1 1 69 399 459 1.59e-27 117
Msa0829060 MtrunA17_Chr3g0137271 89.099 477 36 5 506 970 1 473 0.0 791
Msa0829060 MtrunA17_Chr3g0137271 84.305 446 32 6 84 495 1 442 0.0 670
Msa0829060 MtrunA17_Chr3g0137271 77.108 83 15 2 1 83 397 475 4.32e-31 128
Msa0829060 MtrunA17_Chr1g0186201 87.212 477 45 4 506 970 1 473 0.0 786
Msa0829060 MtrunA17_Chr1g0186201 83.857 446 34 5 84 495 1 442 0.0 679
Msa0829060 MtrunA17_Chr1g0186201 85.507 69 6 1 1 69 397 461 6.15e-31 127
Msa0829060 MtrunA17_Chr1g0212211 74.200 531 68 7 506 970 1 528 0.0 736
Msa0829060 MtrunA17_Chr1g0212211 68.000 500 69 9 84 495 1 497 0.0 597
Msa0829060 MtrunA17_Chr1g0212211 89.855 69 7 0 1 69 448 516 5.06e-35 141
Msa0829060 MtrunA17_Chr8g0364981 81.553 412 42 6 557 957 1 389 0.0 595
Msa0829060 MtrunA17_Chr8g0364981 77.225 382 46 6 132 495 13 371 2.06e-167 494
Msa0829060 MtrunA17_Chr8g0364981 82.353 68 11 1 1 68 323 389 2.43e-30 124
Msa0829060 MtrunA17_Chr1g0184991 84.615 247 26 3 506 740 1 247 2.90e-142 424
Msa0829060 MtrunA17_Chr1g0184991 83.806 247 20 3 84 310 1 247 2.21e-139 416
Msa0829060 MtrunA17_Chr3g0137301 96.392 194 7 0 778 971 1 194 4.56e-125 377
Msa0829060 MtrunA17_Chr3g0137301 84.568 162 11 1 348 495 1 162 1.69e-79 256
Msa0829060 MtrunA17_Chr3g0137301 88.406 69 8 0 1 69 113 181 1.19e-35 134
Msa0829060 MtrunA17_Chr1g0184981 89.637 193 17 1 778 970 1 190 4.11e-116 353
Msa0829060 MtrunA17_Chr1g0184981 82.716 162 11 2 348 495 1 159 4.09e-78 253
Msa0829060 MtrunA17_Chr1g0184981 86.957 69 6 1 1 69 113 178 1.31e-34 130
Msa0829060 MtrunA17_Chr3g0137311 88.966 145 12 1 496 636 9 153 4.64e-81 259
Msa0829060 MtrunA17_Chr3g0137311 68.667 150 32 1 69 203 4 153 3.51e-63 210
Msa0829060 MtrunA17_Chr3g0110461 76.190 42 8 1 614 653 1 42 1.32e-12 63.2
Msa0829060 MtrunA17_Chr3g0110461 76.190 42 8 1 181 220 1 42 2.02e-12 62.8
Msa0829060 MtrunA17_Chr8g0364991 71.795 39 11 0 84 122 1 39 1.49e-12 62.8
Msa0829060 MtrunA17_Chr8g0364991 71.795 39 11 0 506 544 1 39 5.27e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829060 AT5G25260.1 70.947 475 114 5 506 968 1 463 0.0 680
Msa0829060 AT5G25260.1 67.562 447 99 6 84 496 1 435 0.0 585
Msa0829060 AT5G25260.1 58.824 68 27 1 1 68 386 452 1.79e-18 90.1
Msa0829060 AT5G25250.1 70.084 478 117 5 506 971 1 464 0.0 669
Msa0829060 AT5G25250.1 67.338 447 98 6 84 496 1 433 0.0 574
Msa0829060 AT5G25250.1 57.353 68 26 1 1 68 386 450 1.49e-14 77.8
Msa0829060 AT5G64870.1 67.715 477 131 4 507 971 3 468 0.0 614
Msa0829060 AT5G64870.1 65.695 446 108 5 85 496 3 437 2.43e-177 524
Msa0829060 AT5G64870.1 52.941 68 32 0 1 68 387 454 1.04e-16 84.7

Find 239 sgRNAs with CRISPR-Local

Find 752 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGAGTATTTCTCATATT+TGG 0.044243 5_4:-2022780 Msa0829060:CDS
TCATGAATATTTCTCATATT+TGG 0.052081 5_4:-2029098 Msa0829060:CDS
AGTCCCATTGTTGATGATTT+TGG 0.104184 5_4:+2023271 None:intergenic
AATTGAACCAATTCGGATTA+TGG 0.158331 5_4:-2029162 Msa0829060:CDS
AGTACACTTCTCAATGTATT+TGG 0.174054 5_4:-2021454 Msa0829060:CDS
CAACTTGAGTTGAATCAATT+TGG 0.187809 5_4:-2022851 Msa0829060:CDS
TACTTGCATCATCCTAATTA+AGG 0.193653 5_4:+2021157 None:intergenic
TTGAGCCTAAGATTAGTATT+TGG 0.251063 5_4:-2021339 Msa0829060:CDS
TTGAGCCTAAGATTAGTATT+TGG 0.251063 5_4:-2027468 Msa0829060:CDS
CTGCTAAAGCCGTGGCTCTA+AGG 0.254538 5_4:-2028769 Msa0829060:CDS
TCTGAGAAAAGCCCTTAATT+AGG 0.267194 5_4:-2021169 Msa0829060:exon
TAAATCAAACACACAATAAA+AGG 0.272604 5_4:+2021114 None:intergenic
CATGAATATTTCTCATATTT+GGG 0.273088 5_4:-2029097 Msa0829060:CDS
CATGAGTATTTCTCATATTT+GGG 0.283314 5_4:-2022779 Msa0829060:CDS
ATTAGGATGATGCAAGTATT+AGG 0.284835 5_4:-2021152 Msa0829060:three_prime_UTR
GGCTGGAGAAGGTGAGAAAC+AGG 0.294061 5_4:-2028921 Msa0829060:CDS
CGAAGAAGGCCGTGGCTCTA+AGG 0.294288 5_4:-2022451 Msa0829060:CDS
AGGGATTACTTGATGATAAA+TGG 0.307216 5_4:-2032213 None:intergenic
AACAAGTTCATTAACATGAT+TGG 0.311801 5_4:+2022979 None:intergenic
CATGTTGCCTCCTGCTTGGA+TGG 0.312153 5_4:-2021200 Msa0829060:CDS
GCTAAGATGAAAGGTGAAAT+TGG 0.319472 5_4:-2022704 Msa0829060:CDS
GCTAAGATGAAAGGTGAAAT+TGG 0.319472 5_4:-2029022 Msa0829060:CDS
TCTAGGTACAAGAGGCTAAC+TGG 0.321242 5_4:-2027795 Msa0829060:intron
TTAGTCCAAATGTTAATCTT+AGG 0.325712 5_4:+2032135 None:intergenic
ACTAATGGTGGTGATAATAA+TGG 0.334485 5_4:-2027445 Msa0829060:CDS
AACGAGTTCATTAACGTGAT+TGG 0.339850 5_4:+2029297 None:intergenic
CAACTTGAATTGAACCAATT+CGG 0.339963 5_4:-2029169 Msa0829060:CDS
CTCCCCGCTGTCTTCACAAT+TGG 0.348065 5_4:-2023070 Msa0829060:CDS
GTGAAATTGGTTCGAAATTG+AGG 0.356446 5_4:-2029009 Msa0829060:CDS
AAGATTAACATTTGGACTAA+TGG 0.359631 5_4:-2032132 Msa0829060:CDS
ATCATGAGGGGAAATTAGTT+TGG 0.360315 5_4:+2029327 None:intergenic
ACTTGCATCATCCTAATTAA+GGG 0.372402 5_4:+2021158 None:intergenic
ACACTGCTGTAAGGGATTAC+TGG 0.376943 5_4:-2021423 Msa0829060:CDS
TCAGAATACCTTGTGATAAC+TGG 0.379855 5_4:-2029547 Msa0829060:CDS
ACTTCGAAGGTGTAGTTTAC+CGG 0.380695 5_4:+2023127 None:intergenic
TTAGTCCAAATACTAATCTT+AGG 0.384650 5_4:+2021334 None:intergenic
TTAGTCCAAATACTAATCTT+AGG 0.384650 5_4:+2027463 None:intergenic
AAGATTAGTATTTGGACTAA+TGG 0.384982 5_4:-2021331 Msa0829060:CDS
AAGATTAGTATTTGGACTAA+TGG 0.384982 5_4:-2027460 Msa0829060:CDS
GTTATTTCGCTGCAGAGAAC+TGG 0.390936 5_4:-2022620 Msa0829060:CDS
AAGCTTTACATCGTCAATTC+CGG 0.391365 5_4:+2029522 None:intergenic
TGTAAATCCATAATCCGAAT+TGG 0.394399 5_4:+2029155 None:intergenic
AGGGATTACTGGATGATAAA+TGG 0.400564 5_4:-2021412 Msa0829060:CDS
GTGAAATTGGTTCGAAATTG+AGG 0.404543 5_4:-2022691 Msa0829060:CDS
TCAGAATACCTTGTGATAAC+AGG 0.405430 5_4:-2023229 Msa0829060:CDS
TGTAGGTACAAGAAGCAAAC+TGG 0.406248 5_4:-2021666 Msa0829060:intron
TTGAGCCTAAGATTAACATT+TGG 0.412978 5_4:-2032140 Msa0829060:CDS
AGCTTGGACTAAGGCGGCTC+AGG 0.418423 5_4:-2022489 Msa0829060:CDS
TACCCGGTACATGTTGATAT+TGG 0.418998 5_4:+2029579 None:intergenic
GAAGAAGGCAGCTTGGACTA+AGG 0.419386 5_4:-2022498 Msa0829060:CDS
CATGTTAATGAACTTGTTCA+AGG 0.419850 5_4:-2022974 Msa0829060:CDS
CGGTCAATCCTGCTCCGTCT+TGG 0.421815 5_4:-2023158 Msa0829060:CDS
ACTAATGGTGGTGATAATAG+TGG 0.431222 5_4:-2032117 Msa0829060:CDS
AAATTAGTTTGGCATATTTG+AGG 0.439485 5_4:+2029338 None:intergenic
ATCATGCGGTGAAATAAGTT+TGG 0.453058 5_4:+2023009 None:intergenic
CACGTTAATGAACTCGTTCA+AGG 0.459703 5_4:-2029292 Msa0829060:CDS
AGCAATTCTGTATGAGAAGA+AGG 0.462456 5_4:-2027743 Msa0829060:CDS
CTAATGGTGGTGATAATAAT+GGG 0.463009 5_4:-2027444 Msa0829060:CDS
ATGTTGCCTCCTGCTTGGAT+GGG 0.466301 5_4:-2021199 Msa0829060:CDS
CAAGACGGAGCAGGATTGAC+CGG 0.473034 5_4:+2023159 None:intergenic
TGGACTAATGGTGGTGATAG+TGG 0.473313 5_4:-2021319 Msa0829060:CDS
GAAACAACTACACTGCTGTA+AGG 0.476006 5_4:-2021432 Msa0829060:CDS
AAGAAAGCATGGATTATTCC+CGG 0.476347 5_4:-2023178 Msa0829060:CDS
CGGGCATGTTGCCTCCTGCT+TGG 0.479649 5_4:-2021204 Msa0829060:CDS
GGCTGAAGTAGAGGCGAAGA+AGG 0.482630 5_4:-2022465 Msa0829060:CDS
TGAAATTGGTTCGAAATTGA+GGG 0.484739 5_4:-2029008 Msa0829060:CDS
GGGAATAACTGAAGGTGCCA+TGG 0.487818 5_4:-2027422 Msa0829060:CDS
GGGAATAACTGAAGGTGCCA+TGG 0.487818 5_4:-2032094 Msa0829060:CDS
AAACCAATATCAACATGTAC+CGG 0.488341 5_4:-2029582 Msa0829060:CDS
CTCAAGTCCGCGTACCGCCT+CGG 0.491620 5_4:+2027486 None:intergenic
AAGACTGTCCATGAGCAAAC+AGG 0.492575 5_4:-2032024 Msa0829060:CDS
TGCTTCAATGACAATGGAAG+AGG 0.493478 5_4:-2029239 Msa0829060:CDS
TAAGACTGTCCATGAGCAAA+CGG 0.494142 5_4:-2021224 Msa0829060:CDS
TGCTAAAGCCGTGGCTCTAA+GGG 0.495165 5_4:-2028768 Msa0829060:CDS
AATCCAAAATCATCAACAAT+GGG 0.495756 5_4:-2023274 Msa0829060:CDS
CTCAAGTCCGCGTACTGCCT+CGG 0.500340 5_4:+2021357 None:intergenic
GGACCAATTGTGAAGACAGC+GGG 0.501529 5_4:+2023067 None:intergenic
CTAGGTACAAGAGGCTAACT+GGG 0.505098 5_4:-2027794 Msa0829060:intron
TTGGACTAAGGCGGCTCAGG+TGG 0.505461 5_4:-2022486 Msa0829060:CDS
TGGAAGCAGCGAATCAAGCT+AGG 0.506083 5_4:-2022742 Msa0829060:CDS
TGGAAGCAGCGAATCAAGCT+AGG 0.506083 5_4:-2029060 Msa0829060:CDS
CAGTGTTCAATATGAAACTA+AGG 0.509433 5_4:-2022345 Msa0829060:intron
AGCAATTCTGTATGAGAAGA+AGG 0.509643 5_4:-2021614 Msa0829060:CDS
TGCTTCCATGACGATGGAGG+AGG 0.512100 5_4:-2022921 Msa0829060:CDS
TTGGACAATGGCGGCTCAAG+TGG 0.512749 5_4:-2028804 Msa0829060:CDS
GTTATTGCGATGCAGAGGGC+TGG 0.513050 5_4:-2028938 Msa0829060:CDS
CTCCGTCTTGGACCTCTCAC+CGG 0.514067 5_4:-2023146 Msa0829060:CDS
TTCTGAGTTGGCTAAGAAGA+AGG 0.515574 5_4:-2022513 Msa0829060:CDS
CTAAGGGATGCTGAGTTACA+AGG 0.517627 5_4:-2022434 Msa0829060:CDS
AAGACAGCGGGGAGAACAAA+AGG 0.520506 5_4:+2023079 None:intergenic
GCAACATGCCTGTTTGCTCA+TGG 0.521020 5_4:+2032016 None:intergenic
GCAACATGCCCGTTTGCTCA+TGG 0.523503 5_4:+2021215 None:intergenic
AAGCAACTGGTGGATGTGCC+TGG 0.524212 5_4:-2022803 Msa0829060:CDS
AGCTTTAAGCTTCTCAGTAG+TGG 0.525292 5_4:+2028703 None:intergenic
AAGCAATTGGTGGATGTGCC+TGG 0.526695 5_4:-2029121 Msa0829060:CDS
GAAGAAGGCCGTGGCTCTAA+GGG 0.526932 5_4:-2022450 Msa0829060:CDS
GAGAACAAAAGGAAGTTTCT+CGG 0.527868 5_4:+2023090 None:intergenic
GGCTCAAGTGGCTGAGCTTG+AGG 0.528141 5_4:-2028792 Msa0829060:CDS
AAGACTGTCCATGAGCAAAC+GGG 0.532359 5_4:-2021223 Msa0829060:CDS
ATTAGTATTTGGACTAATGG+TGG 0.532835 5_4:-2021328 Msa0829060:CDS
ATTAGTATTTGGACTAATGG+TGG 0.532835 5_4:-2027457 Msa0829060:CDS
TAAGTTTGGCGTATTTGAGA+AGG 0.534048 5_4:+2023023 None:intergenic
GGAATAACTGAAGGTGCCAT+GGG 0.534697 5_4:-2027421 Msa0829060:CDS
GGAATAACTGAAGGTGCCAT+GGG 0.534697 5_4:-2032093 Msa0829060:CDS
TGGCTAAGAAGAAGGCAGCT+TGG 0.534710 5_4:-2022505 Msa0829060:CDS
AGCAACTTCTTTCATACCCA+TGG 0.534773 5_4:+2021276 None:intergenic
AGCAACTTCTTTCATACCCA+TGG 0.534773 5_4:+2027405 None:intergenic
AGCAACTTCTTTCATACCCA+TGG 0.534773 5_4:+2032077 None:intergenic
TGAGAGGTCCAAGACGGAGC+AGG 0.535402 5_4:+2023150 None:intergenic
ACCTAAAACTAATAAAAGAC+TGG 0.535784 5_4:+2021091 None:intergenic
GAGAGAGGCTGAAGTGGCGG+AGG 0.538584 5_4:-2022540 Msa0829060:CDS
CTCAAGTCCACGTACCGCCT+CGG 0.541020 5_4:+2032158 None:intergenic
AGTACACTTCTCAATGCACT+TGG 0.541119 5_4:-2027583 Msa0829060:CDS
AAATCCAAAATCATCAACAA+TGG 0.541658 5_4:-2023275 Msa0829060:CDS
CACCGTCTTCGACCTCTCAC+CGG 0.542934 5_4:-2029464 Msa0829060:CDS
GGCTCAGGTGGCTGAAGTAG+AGG 0.543694 5_4:-2022474 Msa0829060:CDS
ATTGAACACTGGCTTTGCTA+AGG 0.543911 5_4:+2022357 None:intergenic
ATTCAACACTAGCTTTGCTA+AGG 0.544556 5_4:+2028675 None:intergenic
TGAGAGGTCGAAGACGGTGC+AGG 0.545239 5_4:+2029468 None:intergenic
GCAGAGGGGATTGTGACACT+TGG 0.546780 5_4:-2021499 Msa0829060:CDS
GCAGAGGGGATTGTGACACT+TGG 0.546780 5_4:-2027628 Msa0829060:CDS
GATAAGGCTCCCATCCAAGC+AGG 0.548081 5_4:+2021190 None:intergenic
GAATCAGAGAGAGGCTGAAG+TGG 0.550154 5_4:-2022546 Msa0829060:CDS
AACTGGAGAGGGTGACAAAG+AGG 0.551759 5_4:-2022603 Msa0829060:CDS
CTTAGTTTCATATTGAACAC+TGG 0.552173 5_4:+2022346 None:intergenic
GGCGGAGGCTAATTCTGAGT+TGG 0.552406 5_4:-2022525 Msa0829060:CDS
ACTTCGAAGGTGTAATTCAC+CGG 0.552954 5_4:+2029445 None:intergenic
AAGACGGTGCAGGATTGACC+CGG 0.554154 5_4:+2029478 None:intergenic
AAGAGAGGCTGAAGTGGCTG+AGG 0.558698 5_4:-2028858 Msa0829060:CDS
GAAGAAAGCTGCTTGGACAA+TGG 0.561707 5_4:-2028816 Msa0829060:CDS
AGCTTTCTTCTTAGCCAACT+CGG 0.562096 5_4:+2028829 None:intergenic
TAGTGTTGAATATGACACTA+AGG 0.562966 5_4:-2028663 Msa0829060:intron
TAAAGCTTGAAAAGAAAGCA+TGG 0.566286 5_4:-2029507 Msa0829060:CDS
AAACAACTACACTGCTGTAA+GGG 0.568312 5_4:-2021431 Msa0829060:CDS
TGGCTAAGAAGAAAGCTGCT+TGG 0.570632 5_4:-2028823 Msa0829060:CDS
GGCTGAGGCTAATTCCGAGT+TGG 0.571047 5_4:-2028843 Msa0829060:CDS
TCAGAGAGAGGCTGAAGTGG+CGG 0.571247 5_4:-2022543 Msa0829060:CDS
TAAAACTCGCAAAGAAAGCA+TGG 0.572673 5_4:-2023189 Msa0829060:CDS
GAAAACCTCCTCCATCGTCA+TGG 0.573319 5_4:+2022916 None:intergenic
ATTAATGCCGAGGCGGTACG+TGG 0.575987 5_4:-2032165 Msa0829060:CDS
ATTAACATTTGGACTAATGG+TGG 0.579465 5_4:-2032129 Msa0829060:CDS
AGTAGAGGCGAAGAAGGCCG+TGG 0.579775 5_4:-2022459 Msa0829060:CDS
ATGGGTATGAAAGAAGTTGC+TGG 0.579940 5_4:-2021274 Msa0829060:CDS
ATGGGTATGAAAGAAGTTGC+TGG 0.579940 5_4:-2027403 Msa0829060:intron
ATGGGTATGAAAGAAGTTGC+TGG 0.579940 5_4:-2032075 Msa0829060:CDS
TACCTTGTGATAACTGGCGC+CGG 0.580254 5_4:-2029541 Msa0829060:CDS
TGCCAATGTTAAGCAATTGG+TGG 0.581862 5_4:-2029131 Msa0829060:intron
GGCAGAAGCACAGAAAGCAT+TGG 0.582553 5_4:-2021587 Msa0829060:CDS
GTGACACTTGGGAATGCTCA+AGG 0.583871 5_4:-2021487 Msa0829060:CDS
GTGACACTTGGGAATGCTCA+AGG 0.583871 5_4:-2027616 Msa0829060:CDS
CGAAGGTTATTGCGATGCAG+AGG 0.587186 5_4:-2028943 Msa0829060:CDS
CTAATGGTGGTGATAATAGT+GGG 0.587233 5_4:-2032116 Msa0829060:CDS
CTGGATGCTCTAGGTACAAG+AGG 0.587653 5_4:-2027803 Msa0829060:intron
AAGACGGAGCAGGATTGACC+GGG 0.589066 5_4:+2023160 None:intergenic
GAATCAAAGAGAGGCTGAAG+TGG 0.589954 5_4:-2028864 Msa0829060:CDS
CTCAGCTTCCCTTAGAGCCA+CGG 0.590772 5_4:+2028760 None:intergenic
AGGTGTAATTCACCGGTGAG+AGG 0.592989 5_4:+2029452 None:intergenic
ACTCATGGCTTGAACTTCGA+AGG 0.596495 5_4:+2029432 None:intergenic
CCTCGTTGCTTCAATGACAA+TGG 0.596534 5_4:-2029245 Msa0829060:CDS
TTAGTTTGGCATATTTGAGG+AGG 0.598221 5_4:+2029341 None:intergenic
CAGAGGGGATTGTGACACTT+GGG 0.598815 5_4:-2021498 Msa0829060:CDS
CAGAGGGGATTGTGACACTT+GGG 0.598815 5_4:-2027627 Msa0829060:CDS
TCTGTATGAGAAGAAGGCAG+AGG 0.600808 5_4:-2021608 Msa0829060:CDS
TCTGTATGAGAAGAAGGCAG+AGG 0.600808 5_4:-2027737 Msa0829060:CDS
GCGATGCAGAGGGCTGGAGA+AGG 0.602267 5_4:-2028932 Msa0829060:CDS
ACTCATAGCTTGAACTTCGA+AGG 0.602674 5_4:+2023114 None:intergenic
CTTGTTCAAGGAATCATCGA+AGG 0.603463 5_4:-2022962 Msa0829060:CDS
TAATGGTGGTGATAATAATG+GGG 0.604276 5_4:-2027443 Msa0829060:CDS
GATTGGAGAGTTTATCATGA+GGG 0.606472 5_4:+2029314 None:intergenic
CTCGTTCAAGGAATCATCGA+AGG 0.607063 5_4:-2029280 Msa0829060:CDS
ATTGGTTCGAAATTGAGGCA+AGG 0.608694 5_4:-2022686 Msa0829060:CDS
AGTTACAAGGTGAAGTTGAG+AGG 0.609202 5_4:-2022421 Msa0829060:CDS
AGTTGCAAGGTGAGGTTGAG+AGG 0.610701 5_4:-2028739 Msa0829060:CDS
CTAAGGGAAGCTGAGTTGCA+AGG 0.613783 5_4:-2028752 Msa0829060:CDS
GTGGCAGAAGCTAAGATGAA+AGG 0.614706 5_4:-2022713 Msa0829060:CDS
GTGGCAGAAGCTAAGATGAA+AGG 0.614706 5_4:-2029031 Msa0829060:CDS
GTAGGTACAAGAAGCAAACT+GGG 0.614898 5_4:-2021665 Msa0829060:intron
ATTGGAGAGTTTATCATGAG+GGG 0.615848 5_4:+2029315 None:intergenic
AGGTGTAGTTTACCGGTGAG+AGG 0.619207 5_4:+2023134 None:intergenic
TCATGGACAGTCTTAAACAA+AGG 0.619848 5_4:+2021232 None:intergenic
TCATGGACAGTCTTAAACAA+AGG 0.619848 5_4:+2032033 None:intergenic
TGCTGCTTCCATGACGATGG+AGG 0.620084 5_4:-2022924 Msa0829060:CDS
TTCGCTGCAGAGAACTGGAG+AGG 0.620124 5_4:-2022615 Msa0829060:CDS
ACTGGAGAGGGTGACAAAGA+GGG 0.620203 5_4:-2022602 Msa0829060:CDS
TTTGGGACAAAAGACGCAGA+TGG 0.620243 5_4:-2022762 Msa0829060:CDS
TTTGGGACAAAAGACGCAGA+TGG 0.620243 5_4:-2029080 Msa0829060:CDS
TTGTTCAAGGAATCATCGAA+GGG 0.626113 5_4:-2022961 Msa0829060:CDS
TTGTTTGCGAGCATAAAATG+TGG 0.626952 5_4:+2027687 None:intergenic
ATTAATGCCGAGGCAGTACG+CGG 0.627180 5_4:-2021364 Msa0829060:CDS
AATGGTGGTGATAATAATGG+GGG 0.628201 5_4:-2027442 Msa0829060:CDS
CACCGGTGAGAGGTCGAAGA+CGG 0.628279 5_4:+2029462 None:intergenic
AATGGTGGTGATAATAGTGG+GGG 0.629638 5_4:-2032114 Msa0829060:CDS
ATTGGTTCGAAATTGAGGGA+AGG 0.631232 5_4:-2029004 Msa0829060:CDS
GCTTGAGGCTGCTAAAGCCG+TGG 0.632981 5_4:-2028777 Msa0829060:CDS
GGGACTTTATCGTGTAGCAA+AGG 0.633548 5_4:-2023254 Msa0829060:CDS
GAAGGTTATTGCGATGCAGA+GGG 0.633633 5_4:-2028942 Msa0829060:CDS
TAATGGTGGTGATAATAGTG+GGG 0.634711 5_4:-2032115 Msa0829060:CDS
TATGAGAAATACTCATGACC+AGG 0.635081 5_4:+2022785 None:intergenic
TATGAGAAATATTCATGACC+AGG 0.636387 5_4:+2029103 None:intergenic
GGAAGCAGCGAATCAAGCTA+GGG 0.637623 5_4:-2022741 Msa0829060:CDS
GGAAGCAGCGAATCAAGCTA+GGG 0.637623 5_4:-2029059 Msa0829060:CDS
CTCAGCATCCCTTAGAGCCA+CGG 0.641954 5_4:+2022442 None:intergenic
GATTGCTAAGATTAATGCCG+AGG 0.643593 5_4:-2021374 Msa0829060:CDS
GATTGCTAAGATTAATGCCG+AGG 0.643593 5_4:-2027503 Msa0829060:CDS
GATTGCTAAGATTAATGCCG+AGG 0.643593 5_4:-2032175 Msa0829060:CDS
GCTGTACAAGAAACAGAAAG+AGG 0.643966 5_4:-2021641 Msa0829060:CDS
GGAAGCTGAGTTGCAAGGTG+AGG 0.648282 5_4:-2028747 Msa0829060:CDS
ACTTGCTGCTTCCATGACGA+TGG 0.648427 5_4:-2022927 Msa0829060:CDS
TGGACAGTCTTAAACAAAGG+TGG 0.649112 5_4:+2032036 None:intergenic
AACCAATATCAACATGTACC+GGG 0.649459 5_4:-2029581 Msa0829060:CDS
GAAAATTGATGCAGAGACGA+AGG 0.652587 5_4:-2028960 Msa0829060:CDS
TCGCTGCAGAGAACTGGAGA+GGG 0.653793 5_4:-2022614 Msa0829060:CDS
TGGACAGTCTTAAACAAAGG+TGG 0.655933 5_4:+2021235 None:intergenic
TTCCGGCGCCAGTTATCACA+AGG 0.656470 5_4:+2029539 None:intergenic
TACCGGTGAGAGGTCCAAGA+CGG 0.656829 5_4:+2023144 None:intergenic
GATTACTGGATGATAAATGG+TGG 0.658453 5_4:-2021409 Msa0829060:CDS
GATTACTTGATGATAAATGG+TGG 0.658453 5_4:-2032210 None:intergenic
TGCGAATGTTAAGCAACTGG+TGG 0.658886 5_4:-2022813 Msa0829060:intron
TGCTAAGATTAATGCCGAGG+CGG 0.661554 5_4:-2027500 Msa0829060:CDS
TGCTAAGATTAATGCCGAGG+CGG 0.661554 5_4:-2032172 Msa0829060:CDS
AGACGGTGCAGGATTGACCC+GGG 0.662490 5_4:+2029479 None:intergenic
GTACACTTCTCAATGCACTT+GGG 0.664100 5_4:-2027582 Msa0829060:CDS
AAGGCTCCCATCCAAGCAGG+AGG 0.676037 5_4:+2021193 None:intergenic
GAAAGCTGCTTGGACAATGG+CGG 0.679670 5_4:-2028813 Msa0829060:CDS
TGATTGGAGAGTTTATCATG+AGG 0.680440 5_4:+2029313 None:intergenic
ATTAATGCCGAGGCGGTACG+CGG 0.680968 5_4:-2027493 Msa0829060:CDS
GAATCAAGCTAGGGTTGACG+TGG 0.682564 5_4:-2022732 Msa0829060:CDS
GAATCAAGCTAGGGTTGACG+TGG 0.682564 5_4:-2029050 Msa0829060:CDS
GCTGGAGAAGGTGAGAAACA+GGG 0.684270 5_4:-2028920 Msa0829060:CDS
AGAAACAGGGAATTAAAGTG+AGG 0.688934 5_4:-2028907 Msa0829060:CDS
CTTTCGTAATCGTCAACACG+AGG 0.692794 5_4:+2029364 None:intergenic
ACTAATGGTGGTGATAGTGG+TGG 0.697741 5_4:-2021316 Msa0829060:CDS
TTAGAATACCTGTTATCACA+AGG 0.699616 5_4:+2023221 None:intergenic
CCATTGTCATTGAAGCAACG+AGG 0.710320 5_4:+2029245 None:intergenic
TGTTCAAGGAATCATCGAAG+GGG 0.712596 5_4:-2022960 Msa0829060:CDS
GAAGGCAGCTTGGACTAAGG+CGG 0.713400 5_4:-2022495 Msa0829060:CDS
GACCAATTGTGAAGACAGCG+GGG 0.714278 5_4:+2023068 None:intergenic
AGGACCAATTGTGAAGACAG+CGG 0.726189 5_4:+2023066 None:intergenic
TGATTGGAGTGTCTATCATG+CGG 0.778717 5_4:+2022995 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCACATTTTTAAATTTTTTT+TGG - chr5_4:2023524-2023543 Msa0829060:intron 10.0%
!!! CACATTTTTAAATTTTTTTT+GGG - chr5_4:2023525-2023544 Msa0829060:intron 10.0%
!! CATTATAAAATTAAATCATT+CGG - chr5_4:2025143-2025162 Msa0829060:intron 10.0%
!!! ATTAAAAATCTTCTTTTTTT+TGG + chr5_4:2025438-2025457 None:intergenic 10.0%
!! ATATATCATATATTAAAATC+AGG + chr5_4:2026672-2026691 None:intergenic 10.0%
!!! TTGTTTTTTTATTAAAGAAA+TGG + chr5_4:2027094-2027113 None:intergenic 10.0%
!! TAAATTAAAATGTTACTATT+TGG + chr5_4:2027396-2027415 None:intergenic 10.0%
!!! TAGTAACATTTTAATTTATT+TGG - chr5_4:2027398-2027417 Msa0829060:intron 10.0%
!! AAATATTTAAAAAAATAGAC+GGG + chr5_4:2027633-2027652 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGTTTGA+CGG + chr5_4:2029698-2029717 None:intergenic 10.0%
!! ACTTTATTATACTTTAATAT+TGG - chr5_4:2031516-2031535 Msa0829060:intron 10.0%
!!! GTTGATTTTTTTTTTTTTGT+TGG - chr5_4:2021570-2021589 Msa0829060:CDS 15.0%
!! AAGTAAGTATAAAACAAAAA+AGG - chr5_4:2022879-2022898 Msa0829060:CDS 15.0%
!! AGTAAGTATAAAACAAAAAA+GGG - chr5_4:2022880-2022899 Msa0829060:CDS 15.0%
!! AATTAATCATGAGTTTAATT+AGG + chr5_4:2023477-2023496 None:intergenic 15.0%
!! TAATTAAACTCATGATTAAT+TGG - chr5_4:2023476-2023495 Msa0829060:intron 15.0%
!!! TTTTAAATTTTTTTTGGGAT+AGG - chr5_4:2023530-2023549 Msa0829060:intron 15.0%
!!! TATGTTTTACTTTTAATCAA+CGG + chr5_4:2025370-2025389 None:intergenic 15.0%
!! ATCAATAACATAAAAATTAG+CGG + chr5_4:2026546-2026565 None:intergenic 15.0%
!! TAAAGGTCTAATAATAAAAA+TGG + chr5_4:2026639-2026658 None:intergenic 15.0%
!! TTAACAAGTTATTCATAAAT+GGG + chr5_4:2026956-2026975 None:intergenic 15.0%
!! CTAAAATCTATGTTATTAAA+TGG + chr5_4:2027347-2027366 None:intergenic 15.0%
!! TATTTAAATATCCTTGAAAT+GGG + chr5_4:2027798-2027817 None:intergenic 15.0%
!!! CCTTTTTGTAAAATTAAAAT+AGG + chr5_4:2029325-2029344 None:intergenic 15.0%
!!! CCTATTTTAATTTTACAAAA+AGG - chr5_4:2029322-2029341 Msa0829060:CDS 15.0%
!!! TAATATGTTAATTGATAGTT+AGG + chr5_4:2029497-2029516 None:intergenic 15.0%
!!! TTATTTTTTCTAAAAATGAG+TGG - chr5_4:2029514-2029533 Msa0829060:CDS 15.0%
!!! CAATATTGGTTATATTATTA+TGG + chr5_4:2029609-2029628 None:intergenic 15.0%
!!! AGTGAATTTTTTTACAATAT+TGG + chr5_4:2029623-2029642 None:intergenic 15.0%
!! ATTAATATAACCAATACTAT+TGG - chr5_4:2029665-2029684 Msa0829060:intron 15.0%
!!! CAAGTTAGTTATAATTTTAT+CGG + chr5_4:2029781-2029800 None:intergenic 15.0%
!! CATTTGGTTAAAAATTAAAA+GGG + chr5_4:2031165-2031184 None:intergenic 15.0%
!! TCATTTGGTTAAAAATTAAA+AGG + chr5_4:2031166-2031185 None:intergenic 15.0%
!!! ATATTTTAAAGACCAATTAA+AGG - chr5_4:2031242-2031261 Msa0829060:intron 15.0%
!!! AGTTTCATTTTTTAAACAAT+TGG - chr5_4:2031356-2031375 Msa0829060:intron 15.0%
!! TGTTAAATTACCAAACTAAA+AGG + chr5_4:2021376-2021395 None:intergenic 20.0%
!! TAATACAACACAAATGATTA+CGG - chr5_4:2022979-2022998 Msa0829060:CDS 20.0%
!!! AAGTGATTAAATTTGTTGAT+AGG - chr5_4:2023178-2023197 Msa0829060:CDS 20.0%
!!! AGTGATTAAATTTGTTGATA+GGG - chr5_4:2023179-2023198 Msa0829060:CDS 20.0%
!! ATTAGTATACTCTTATACAT+AGG - chr5_4:2023435-2023454 Msa0829060:intron 20.0%
!!! TGTTATAGGATCTTATTTAT+AGG + chr5_4:2023590-2023609 None:intergenic 20.0%
!! TCATGAATATTTCTCATATT+TGG - chr5_4:2024191-2024210 Msa0829060:intron 20.0%
!! CATGAATATTTCTCATATTT+GGG - chr5_4:2024192-2024211 Msa0829060:intron 20.0%
!! TTAAATTCATACATATACCT+AGG + chr5_4:2024823-2024842 None:intergenic 20.0%
!! CCACAATATAGTTTAATAAA+AGG + chr5_4:2024962-2024981 None:intergenic 20.0%
!!! CCTTTTATTAAACTATATTG+TGG - chr5_4:2024959-2024978 Msa0829060:intron 20.0%
!! AAAAGTAAAACATAACAAGT+AGG - chr5_4:2025376-2025395 Msa0829060:intron 20.0%
!!! AAAAATCTTCTTTTTTTTGG+TGG + chr5_4:2025435-2025454 None:intergenic 20.0%
!! ATTATACAAGAAACAAAAAG+AGG - chr5_4:2025519-2025538 Msa0829060:intron 20.0%
!!! GTATTTTTTGAATGGAATTT+TGG - chr5_4:2026149-2026168 Msa0829060:intron 20.0%
!!! ACCATATAACTAAAATTTTG+AGG + chr5_4:2026282-2026301 None:intergenic 20.0%
!!! TCAATTTATTTTGTTGTTGT+TGG + chr5_4:2026365-2026384 None:intergenic 20.0%
!!! ATTTACGTTTTTTCTTTGTA+GGG + chr5_4:2026851-2026870 None:intergenic 20.0%
!! CTTAACAAGTTATTCATAAA+TGG + chr5_4:2026957-2026976 None:intergenic 20.0%
!!! AAAACAATGGCTTTTAATAT+GGG + chr5_4:2027207-2027226 None:intergenic 20.0%
!!! TAAAACAATGGCTTTTAATA+TGG + chr5_4:2027208-2027227 None:intergenic 20.0%
!!! TTTTCTATTATATCTCATCA+CGG - chr5_4:2027250-2027269 Msa0829060:intron 20.0%
!!! TTCATTTTCGTAAAAATATG+AGG - chr5_4:2027478-2027497 Msa0829060:CDS 20.0%
!! CTATTTAAATATCCTTGAAA+TGG + chr5_4:2027799-2027818 None:intergenic 20.0%
!! CTTCCAATAAATCATTATAT+GGG - chr5_4:2028836-2028855 Msa0829060:CDS 20.0%
!! GAGTTGCAAAAAAAATTATT+TGG - chr5_4:2029084-2029103 Msa0829060:CDS 20.0%
!!! TAGAATTTGAATGATTTTCA+AGG + chr5_4:2029171-2029190 None:intergenic 20.0%
!!! TTCTAGTTGGTATAATATTT+TGG - chr5_4:2029350-2029369 Msa0829060:CDS 20.0%
!! AAAAAAAAGAGAAGAGATAT+TGG - chr5_4:2029711-2029730 Msa0829060:intron 20.0%
!! CGATAAAATTATAACTAACT+TGG - chr5_4:2029779-2029798 Msa0829060:intron 20.0%
!!! GTAACAATATAGAATTTGTT+AGG + chr5_4:2029872-2029891 None:intergenic 20.0%
!! AAAGAAAATTGAAACTAAAG+AGG + chr5_4:2029981-2030000 None:intergenic 20.0%
!!! ACAATTTGATATGTTTTGAT+AGG - chr5_4:2031049-2031068 Msa0829060:intron 20.0%
!!! TGATTATTGATTCTGTTATA+TGG - chr5_4:2031325-2031344 Msa0829060:intron 20.0%
!!! AATTCTCTATAAAGCTTTAA+TGG + chr5_4:2031413-2031432 None:intergenic 20.0%
!!! ATGTTTTCAATATTTAGTGT+TGG - chr5_4:2031543-2031562 Msa0829060:intron 20.0%
!! TAAATCAAACACACAATAAA+AGG + chr5_4:2032178-2032197 None:intergenic 20.0%
! TTAGTCCAAATGTTAATCTT+AGG + chr5_4:2021157-2021176 None:intergenic 25.0%
! AAGATTAACATTTGGACTAA+TGG - chr5_4:2021157-2021176 Msa0829060:exon 25.0%
! TAGCAATATAAAATTGAGAG+TGG - chr5_4:2021956-2021975 Msa0829060:intron 25.0%
! ATAAAATGTTAGGAAAACAG+CGG + chr5_4:2022104-2022123 None:intergenic 25.0%
! TTCTTTGTCGAAATGAAAAT+AGG + chr5_4:2022216-2022235 None:intergenic 25.0%
! CCAGAAAATAGTATATTCTT+TGG + chr5_4:2022242-2022261 None:intergenic 25.0%
!! CCAAAGAATATACTATTTTC+TGG - chr5_4:2022239-2022258 Msa0829060:intron 25.0%
! AAATACAAATCTATGACACT+AGG + chr5_4:2022565-2022584 None:intergenic 25.0%
! TTTGCAATATCACTATTAGT+TGG + chr5_4:2022664-2022683 None:intergenic 25.0%
! AACTAATAGTGATATTGCAA+AGG - chr5_4:2022663-2022682 Msa0829060:CDS 25.0%
! AAAATCAAGATTGAATCGAA+TGG + chr5_4:2022960-2022979 None:intergenic 25.0%
! GCAAATGATCATAATGATAT+TGG - chr5_4:2023036-2023055 Msa0829060:intron 25.0%
! CTAACCATTAAATCAACAAT+GGG + chr5_4:2023242-2023261 None:intergenic 25.0%
! TCTAACCATTAAATCAACAA+TGG + chr5_4:2023243-2023262 None:intergenic 25.0%
! ACAGGGAATAATAAACAAAT+TGG + chr5_4:2023286-2023305 None:intergenic 25.0%
! TCTACTATCTTCAACTAAAA+TGG + chr5_4:2023322-2023341 None:intergenic 25.0%
!!! ATTTTAGTTGAAGATAGTAG+AGG - chr5_4:2023321-2023340 Msa0829060:intron 25.0%
!!! TCCTTTTGTTCTATTTTTAG+AGG - chr5_4:2023372-2023391 Msa0829060:intron 25.0%
!! ACCTCTAAAAATAGAACAAA+AGG + chr5_4:2023376-2023395 None:intergenic 25.0%
!!! ACATAGGATTTTAATTTACG+TGG - chr5_4:2023451-2023470 Msa0829060:intron 25.0%
! TAAACTCATGATTAATTGGA+TGG - chr5_4:2023480-2023499 Msa0829060:intron 25.0%
! AAACTCATGATTAATTGGAT+GGG - chr5_4:2023481-2023500 Msa0829060:intron 25.0%
!!! AAATTTTTTTTGGGATAGGA+TGG - chr5_4:2023534-2023553 Msa0829060:intron 25.0%
!! TCTTATTTGACTTATTCTCA+GGG + chr5_4:2023566-2023585 None:intergenic 25.0%
!! ATCTTATTTGACTTATTCTC+AGG + chr5_4:2023567-2023586 None:intergenic 25.0%
!!! TTATAGCTAGAGTTTGTTAT+AGG + chr5_4:2023604-2023623 None:intergenic 25.0%
! TATAACAAACTCTAGCTATA+AGG - chr5_4:2023603-2023622 Msa0829060:intron 25.0%
!! AAATTAGTTTGGCATATTTG+AGG + chr5_4:2023954-2023973 None:intergenic 25.0%
! AAGAAGAAGTTAAATTTGCA+AGG + chr5_4:2024657-2024676 None:intergenic 25.0%
!!! TCACTGTAATTACAGTTTTT+TGG - chr5_4:2024737-2024756 Msa0829060:intron 25.0%
! ATATTGAAACCAATCACAAA+GGG + chr5_4:2024858-2024877 None:intergenic 25.0%
! TATATTGAAACCAATCACAA+AGG + chr5_4:2024859-2024878 None:intergenic 25.0%
!! TAATGTTTAATCTGTCGATT+GGG + chr5_4:2025029-2025048 None:intergenic 25.0%
! GTATATTAACTATGGATTTG+CGG + chr5_4:2025084-2025103 None:intergenic 25.0%
! TTTGCAAGGTATATTAACTA+TGG + chr5_4:2025092-2025111 None:intergenic 25.0%
! ATGATATATGTTCATTTGCA+AGG + chr5_4:2025106-2025125 None:intergenic 25.0%
! ACACAAATAATAGCAAGAAA+AGG + chr5_4:2025233-2025252 None:intergenic 25.0%
! AAGAAAAAGATTGAAGAATG+TGG - chr5_4:2025303-2025322 Msa0829060:intron 25.0%
! TTAACAAAAATTGACAAGGT+TGG + chr5_4:2025340-2025359 None:intergenic 25.0%
!!! AATGTTTACTTTTTAAGTGC+TGG - chr5_4:2025455-2025474 Msa0829060:intron 25.0%
! TTAGTCCAAATACTAATCTT+AGG + chr5_4:2025829-2025848 None:intergenic 25.0%
! AAGATTAGTATTTGGACTAA+TGG - chr5_4:2025829-2025848 Msa0829060:intron 25.0%
! CACATATATCACACAATAAA+AGG + chr5_4:2026048-2026067 None:intergenic 25.0%
! TTAAAACAAAACTTCTGACA+AGG - chr5_4:2026175-2026194 Msa0829060:intron 25.0%
!!! GCCTCAAAATTTTAGTTATA+TGG - chr5_4:2026278-2026297 Msa0829060:intron 25.0%
!!! ATTTTAGTTATATGGTAGCT+TGG - chr5_4:2026286-2026305 Msa0829060:intron 25.0%
! TAACATAAAAATTAGCGGTT+GGG + chr5_4:2026541-2026560 None:intergenic 25.0%
! ATAACATAAAAATTAGCGGT+TGG + chr5_4:2026542-2026561 None:intergenic 25.0%
! TATAACATATAAGGGAAATG+GGG + chr5_4:2026800-2026819 None:intergenic 25.0%
! CTATAACATATAAGGGAAAT+GGG + chr5_4:2026801-2026820 None:intergenic 25.0%
! TCTATAACATATAAGGGAAA+TGG + chr5_4:2026802-2026821 None:intergenic 25.0%
! TTTCCCTTATATGTTATAGA+AGG - chr5_4:2026802-2026821 Msa0829060:intron 25.0%
! GATCCTTCTATAACATATAA+GGG + chr5_4:2026808-2026827 None:intergenic 25.0%
! TGATCCTTCTATAACATATA+AGG + chr5_4:2026809-2026828 None:intergenic 25.0%
!!! TTTACGTTTTTTCTTTGTAG+GGG + chr5_4:2026850-2026869 None:intergenic 25.0%
!!! CATTTACGTTTTTTCTTTGT+AGG + chr5_4:2026852-2026871 None:intergenic 25.0%
! TAATAATAGCCTTTCTGATA+AGG + chr5_4:2026927-2026946 None:intergenic 25.0%
! AAAATGAAAGTTAATGACGT+TGG + chr5_4:2026991-2027010 None:intergenic 25.0%
!! AAACAATGGCTTTTAATATG+GGG + chr5_4:2027206-2027225 None:intergenic 25.0%
! AACTTCGCAAATTAAAACAA+TGG + chr5_4:2027220-2027239 None:intergenic 25.0%
! AGTAACAAGATGTTACTAAA+TGG + chr5_4:2027320-2027339 None:intergenic 25.0%
! ATGACTTCAAAAAAGAAGAA+AGG - chr5_4:2027870-2027889 Msa0829060:intron 25.0%
! AGTAAAAAAAACGAACCAAA+AGG + chr5_4:2028139-2028158 None:intergenic 25.0%
!!! TTTTGGTTCGTTTTTTTTAC+TGG - chr5_4:2028138-2028157 Msa0829060:intron 25.0%
! CCATATAATGATTTATTGGA+AGG + chr5_4:2028838-2028857 None:intergenic 25.0%
! CCTTCCAATAAATCATTATA+TGG - chr5_4:2028835-2028854 Msa0829060:CDS 25.0%
! TGACCCATATAATGATTTAT+TGG + chr5_4:2028842-2028861 None:intergenic 25.0%
! ATGATTGTAATCTTTATCAC+TGG + chr5_4:2028870-2028889 None:intergenic 25.0%
! TTTGCAACTCATACATATAT+AGG + chr5_4:2029074-2029093 None:intergenic 25.0%
!!! AGAGATTTTAAAATAGACCA+AGG + chr5_4:2029133-2029152 None:intergenic 25.0%
!! TTAAAATCTCTATTTTCCCT+TGG - chr5_4:2029142-2029161 Msa0829060:intron 25.0%
!!! AGTTTTTCTGTTTTGAGAAT+AGG + chr5_4:2029297-2029316 None:intergenic 25.0%
!! AATTAGTTTCATTTGTCTCT+TGG - chr5_4:2029471-2029490 Msa0829060:CDS 25.0%
! TATTATGGCCATTGAAAAAT+GGG + chr5_4:2029594-2029613 None:intergenic 25.0%
! TTATTATGGCCATTGAAAAA+TGG + chr5_4:2029595-2029614 None:intergenic 25.0%
! TATAACCAATACTATTGGAT+AGG - chr5_4:2029670-2029689 Msa0829060:intron 25.0%
! GTTTGTAAGAATATTGAAAC+AGG + chr5_4:2029927-2029946 None:intergenic 25.0%
!! AGTTTCAATTTTCTTTGTCT+AGG - chr5_4:2029985-2030004 Msa0829060:intron 25.0%
! AAATCCAAAATCATCAACAA+TGG - chr5_4:2030014-2030033 Msa0829060:intron 25.0%
! AATCCAAAATCATCAACAAT+GGG - chr5_4:2030015-2030034 Msa0829060:intron 25.0%
! AACAAGTTCATTAACATGAT+TGG + chr5_4:2030313-2030332 None:intergenic 25.0%
! TCATGAGTATTTCTCATATT+TGG - chr5_4:2030509-2030528 Msa0829060:intron 25.0%
! CATGAGTATTTCTCATATTT+GGG - chr5_4:2030510-2030529 Msa0829060:intron 25.0%
! AAAGTTGTGTATCCTTTAAT+TGG + chr5_4:2031257-2031276 None:intergenic 25.0%
! CTTTAATGGTGAAAAAAAAC+AGG + chr5_4:2031399-2031418 None:intergenic 25.0%
!! TTAACAGTATTTTACAACCT+TGG - chr5_4:2031432-2031451 Msa0829060:intron 25.0%
! TTTATTGATACTTATCACCA+AGG + chr5_4:2031452-2031471 None:intergenic 25.0%
!!! TTTTTTGGTGATTGAAACTT+TGG - chr5_4:2031596-2031615 Msa0829060:intron 25.0%
! TTAGTCCAAATACTAATCTT+AGG + chr5_4:2025829-2025848 None:intergenic 25.0%
! AAGATTAGTATTTGGACTAA+TGG - chr5_4:2025829-2025848 Msa0829060:intron 25.0%
!!! ACCAGTCTTTTATTAGTTTT+AGG - chr5_4:2026076-2026095 Msa0829060:intron 25.0%
! ACCTAAAACTAATAAAAGAC+TGG + chr5_4:2032201-2032220 None:intergenic 25.0%
TTGAGCCTAAGATTAACATT+TGG - chr5_4:2021149-2021168 Msa0829060:three_prime_UTR 30.0%
ATTAACATTTGGACTAATGG+TGG - chr5_4:2021160-2021179 Msa0829060:exon 30.0%
!! CAAACTAAAAGGTACTACTA+CGG + chr5_4:2021365-2021384 None:intergenic 30.0%
ATTTAAACTCTCTACATGCT+TGG - chr5_4:2021485-2021504 Msa0829060:CDS 30.0%
TAACAACAAAACTCTTGAGA+TGG - chr5_4:2021533-2021552 Msa0829060:CDS 30.0%
ACCTGAATTCAATTCTTGTT+CGG + chr5_4:2021625-2021644 None:intergenic 30.0%
!! GCTGTTTTCCTAACATTTTA+TGG - chr5_4:2022103-2022122 Msa0829060:intron 30.0%
CAAGTTCACCATAAAATGTT+AGG + chr5_4:2022114-2022133 None:intergenic 30.0%
TGAAAATAGGAAAGGAATAG+AGG + chr5_4:2022203-2022222 None:intergenic 30.0%
TGTCGAAATGAAAATAGGAA+AGG + chr5_4:2022211-2022230 None:intergenic 30.0%
ATCCGTTCTTTGTTCTTAAT+TGG - chr5_4:2022314-2022333 Msa0829060:intron 30.0%
TCCGTTCTTTGTTCTTAATT+GGG - chr5_4:2022315-2022334 Msa0829060:intron 30.0%
AAGTATAACAAAAGAAGCAG+TGG + chr5_4:2022365-2022384 None:intergenic 30.0%
GAATAAGCAAAATAGAAAGC+AGG + chr5_4:2022431-2022450 None:intergenic 30.0%
AAAGCAGAATCAGAAACAAA+AGG + chr5_4:2022458-2022477 None:intergenic 30.0%
TTATTAACCTAGAACCTGTA+GGG + chr5_4:2022512-2022531 None:intergenic 30.0%
ATTGCTCTTGGTAAATTAGT+TGG + chr5_4:2022704-2022723 None:intergenic 30.0%
CAAATCAAAAGTTTGGGAAT+TGG + chr5_4:2022740-2022759 None:intergenic 30.0%
TGGACTCAAATCAAAAGTTT+GGG + chr5_4:2022746-2022765 None:intergenic 30.0%
TTGGACTCAAATCAAAAGTT+TGG + chr5_4:2022747-2022766 None:intergenic 30.0%
!! ATAATGAGAGTACTACAAGT+TGG + chr5_4:2022766-2022785 None:intergenic 30.0%
AATTGAGTAAGAGTTCAACA+AGG - chr5_4:2023064-2023083 Msa0829060:CDS 30.0%
!!! TCGCATTGTTGATTTTTTTC+TGG - chr5_4:2023210-2023229 Msa0829060:CDS 30.0%
!! GAAACCCATTGTTGATTTAA+TGG - chr5_4:2023235-2023254 Msa0829060:CDS 30.0%
ATGGATTTCACTAAAACACA+GGG + chr5_4:2023303-2023322 None:intergenic 30.0%
! AATGGATTTCACTAAAACAC+AGG + chr5_4:2023304-2023323 None:intergenic 30.0%
! AAATGTACTGACAATGGAAT+TGG + chr5_4:2023349-2023368 None:intergenic 30.0%
ATGATTAATTGGATGGGAAT+TGG - chr5_4:2023487-2023506 Msa0829060:intron 30.0%
AGAATTGTGATAATCGTTTG+CGG + chr5_4:2023651-2023670 None:intergenic 30.0%
AAACCAATATCAACATGTAC+CGG - chr5_4:2023707-2023726 Msa0829060:intron 30.0%
TAAAGCTTGAAAAGAAAGCA+TGG - chr5_4:2023782-2023801 Msa0829060:intron 30.0%
CAACTTGAATTGAACCAATT+CGG - chr5_4:2024120-2024139 Msa0829060:intron 30.0%
AATTGAACCAATTCGGATTA+TGG - chr5_4:2024127-2024146 Msa0829060:intron 30.0%
TGTAAATCCATAATCCGAAT+TGG + chr5_4:2024137-2024156 None:intergenic 30.0%
TATGAGAAATATTCATGACC+AGG + chr5_4:2024189-2024208 None:intergenic 30.0%
!! TGAAATTGGTTCGAAATTGA+GGG - chr5_4:2024281-2024300 Msa0829060:intron 30.0%
!! AGTTTTTGAGAATCAAAGAG+AGG - chr5_4:2024416-2024435 Msa0829060:intron 30.0%
! TAGTGTTGAATATGACACTA+AGG - chr5_4:2024626-2024645 Msa0829060:intron 30.0%
! AACTTTAAGTTTAAGCTCCT+AGG - chr5_4:2024803-2024822 Msa0829060:intron 30.0%
TATTGAAACCAATCACAAAG+GGG + chr5_4:2024857-2024876 None:intergenic 30.0%
TGCATATTTACGAAGATCAT+AGG - chr5_4:2024901-2024920 Msa0829060:intron 30.0%
TATTTACGAAGATCATAGGA+CGG - chr5_4:2024905-2024924 Msa0829060:intron 30.0%
! AATGTTTAATCTGTCGATTG+GGG + chr5_4:2025028-2025047 None:intergenic 30.0%
GTAATGTTTAATCTGTCGAT+TGG + chr5_4:2025030-2025049 None:intergenic 30.0%
AAGTAGCAAAATGCTAATTG+AGG - chr5_4:2025058-2025077 Msa0829060:intron 30.0%
AAAGGATCATGATTTAGACT+TGG + chr5_4:2025215-2025234 None:intergenic 30.0%
CCTGTTAACAAAAATTGACA+AGG + chr5_4:2025344-2025363 None:intergenic 30.0%
! CCTTGTCAATTTTTGTTAAC+AGG - chr5_4:2025341-2025360 Msa0829060:intron 30.0%
!!! AATCTTCTTTTTTTTGGTGG+TGG + chr5_4:2025432-2025451 None:intergenic 30.0%
GTTATACGCAAAGAAAAAAG+AGG - chr5_4:2025639-2025658 Msa0829060:intron 30.0%
! AGGGATTACTTGATGATAAA+TGG - chr5_4:2025748-2025767 Msa0829060:intron 30.0%
! GATTACTTGATGATAAATGG+TGG - chr5_4:2025751-2025770 Msa0829060:intron 30.0%
TTGAGCCTAAGATTAGTATT+TGG - chr5_4:2025821-2025840 Msa0829060:intron 30.0%
ATTAGTATTTGGACTAATGG+TGG - chr5_4:2025832-2025851 Msa0829060:intron 30.0%
! ACTAATGGTGGTGATAATAA+TGG - chr5_4:2025844-2025863 Msa0829060:intron 30.0%
! CTAATGGTGGTGATAATAAT+GGG - chr5_4:2025845-2025864 Msa0829060:intron 30.0%
! TAATGGTGGTGATAATAATG+GGG - chr5_4:2025846-2025865 Msa0829060:intron 30.0%
! CCAAATTAAGAGTTTTTGTC+AGG + chr5_4:2025994-2026013 None:intergenic 30.0%
CCTGACAAAAACTCTTAATT+TGG - chr5_4:2025991-2026010 Msa0829060:intron 30.0%
AATTTGGAGATGCAAGTATT+AGG - chr5_4:2026007-2026026 Msa0829060:intron 30.0%
! AGTGTACATTTTTACATGCT+TGG - chr5_4:2026127-2026146 Msa0829060:intron 30.0%
!!! CATGCTTGGTATTTTTTGAA+TGG - chr5_4:2026141-2026160 Msa0829060:intron 30.0%
AGAGTTCTTTACCAATTTAC+AGG - chr5_4:2026255-2026274 Msa0829060:intron 30.0%
GAGTTCTTTACCAATTTACA+GGG - chr5_4:2026256-2026275 Msa0829060:intron 30.0%
GGATAAAAAAAATCAGAGAG+AGG + chr5_4:2026520-2026539 None:intergenic 30.0%
GAGTCGTCTTCTATTTAAAT+TGG + chr5_4:2026584-2026603 None:intergenic 30.0%
AATCAGGTCTGTCAAATTAA+AGG + chr5_4:2026656-2026675 None:intergenic 30.0%
TACACGATGTGTCATATATA+TGG - chr5_4:2026739-2026758 Msa0829060:intron 30.0%
GTTTCAAATCCTTATCAGAA+AGG - chr5_4:2026915-2026934 Msa0829060:intron 30.0%
! AGTTATTCATAAATGGGTTC+TGG + chr5_4:2026950-2026969 None:intergenic 30.0%
ACATGACATTGTTCAATGTA+TGG + chr5_4:2027752-2027771 None:intergenic 30.0%
! GTTCAATTTTACCCATTTCA+AGG - chr5_4:2027784-2027803 Msa0829060:CDS 30.0%
!! TATTACTTTGGTGCTTAACA+AGG + chr5_4:2028171-2028190 None:intergenic 30.0%
GCTTAATATCAAACTAACCA+AGG - chr5_4:2028677-2028696 Msa0829060:CDS 30.0%
ACTTTAATGCTACATGTACT+GGG - chr5_4:2028735-2028754 Msa0829060:CDS 30.0%
GATTACAATCATGTTCTTGA+AGG - chr5_4:2028878-2028897 Msa0829060:intron 30.0%
TAAGAATTCCTGATCTTCAA+TGG - chr5_4:2028983-2029002 Msa0829060:CDS 30.0%
! CTTCAATGGAGCTTTATAAT+AGG - chr5_4:2028997-2029016 Msa0829060:CDS 30.0%
! TAAGTTTGTTTATCCAAGCA+AGG - chr5_4:2029048-2029067 Msa0829060:CDS 30.0%
!! ATGATTTTCAAGGTTTCCAA+GGG + chr5_4:2029161-2029180 None:intergenic 30.0%
!! AATGATTTTCAAGGTTTCCA+AGG + chr5_4:2029162-2029181 None:intergenic 30.0%
TCGTCAAGAATGATTGAAAT+TGG - chr5_4:2029220-2029239 Msa0829060:CDS 30.0%
CGTCAAGAATGATTGAAATT+GGG - chr5_4:2029221-2029240 Msa0829060:CDS 30.0%
AATAGGAATAGAAGTTAAGC+TGG + chr5_4:2029280-2029299 None:intergenic 30.0%
!! CAAAAAGGTCTATTTCTAGT+TGG - chr5_4:2029337-2029356 Msa0829060:CDS 30.0%
GGCTTGACAAAAAAAATTGA+TGG + chr5_4:2029566-2029585 None:intergenic 30.0%
AAAGAGAAGAGATATTGGAT+AGG - chr5_4:2029716-2029735 Msa0829060:intron 30.0%
!!! GAGTTATTTTAGGACGTATA+AGG + chr5_4:2029749-2029768 None:intergenic 30.0%
!! GATCTCATTCGAGTTATTTT+AGG + chr5_4:2029759-2029778 None:intergenic 30.0%
TTAGAATACCTGTTATCACA+AGG + chr5_4:2030071-2030090 None:intergenic 30.0%
! CATGTTAATGAACTTGTTCA+AGG - chr5_4:2030315-2030334 Msa0829060:intron 30.0%
!! CAACTTGAGTTGAATCAATT+TGG - chr5_4:2030438-2030457 Msa0829060:intron 30.0%
CTTAGTTTCATATTGAACAC+TGG + chr5_4:2030946-2030965 None:intergenic 30.0%
CAGTGTTCAATATGAAACTA+AGG - chr5_4:2030944-2030963 Msa0829060:intron 30.0%
! GCAATTCTATTTTACTAGCT+AGG - chr5_4:2031016-2031035 Msa0829060:intron 30.0%
AGGTGTAGAAGATTAATGAT+AGG - chr5_4:2031211-2031230 Msa0829060:intron 30.0%
!!! GTACTACTGAATCACTTTTT+TGG - chr5_4:2031581-2031600 Msa0829060:intron 30.0%
GCTATATGCAAAGAAAAAAG+AGG - chr5_4:2031768-2031787 Msa0829060:intron 30.0%
AGTACACTTCTCAATGTATT+TGG - chr5_4:2031835-2031854 Msa0829060:intron 30.0%
TTGAGCCTAAGATTAGTATT+TGG - chr5_4:2025821-2025840 Msa0829060:intron 30.0%
ATTAGTATTTGGACTAATGG+TGG - chr5_4:2025832-2025851 Msa0829060:intron 30.0%
ACTTGCATCATCCTAATTAA+GGG + chr5_4:2032134-2032153 None:intergenic 30.0%
TACTTGCATCATCCTAATTA+AGG + chr5_4:2032135-2032154 None:intergenic 30.0%
ATTAGGATGATGCAAGTATT+AGG - chr5_4:2032137-2032156 Msa0829060:CDS 30.0%
! ACTAATGGTGGTGATAATAG+TGG - chr5_4:2021172-2021191 Msa0829060:exon 35.0%
! CTAATGGTGGTGATAATAGT+GGG - chr5_4:2021173-2021192 Msa0829060:exon 35.0%
! TAATGGTGGTGATAATAGTG+GGG - chr5_4:2021174-2021193 Msa0829060:CDS 35.0%
TCATGGACAGTCTTAAACAA+AGG + chr5_4:2021259-2021278 None:intergenic 35.0%
! TTAAGAGCTTTTGTCAGGTA+AGG + chr5_4:2021317-2021336 None:intergenic 35.0%
! CCAAATTAAGAGCTTTTGTC+AGG + chr5_4:2021322-2021341 None:intergenic 35.0%
CCTGACAAAAGCTCTTAATT+TGG - chr5_4:2021319-2021338 Msa0829060:CDS 35.0%
AATTTGGAGATGCAAGTGTT+AGG - chr5_4:2021335-2021354 Msa0829060:CDS 35.0%
!! CGTAGTAGTACCTTTTAGTT+TGG - chr5_4:2021363-2021382 Msa0829060:CDS 35.0%
! AACAGTAGTACCTTTTATCG+TGG - chr5_4:2021392-2021411 Msa0829060:CDS 35.0%
! ACAGTAGTACCTTTTATCGT+GGG - chr5_4:2021393-2021412 Msa0829060:CDS 35.0%
TCCGAACAAGAATTGAATTC+AGG - chr5_4:2021621-2021640 Msa0829060:CDS 35.0%
CCTACTAAGACAAATCATTC+AGG + chr5_4:2021651-2021670 None:intergenic 35.0%
! CCTGAATGATTTGTCTTAGT+AGG - chr5_4:2021648-2021667 Msa0829060:CDS 35.0%
TCATTAACCACTTAAGCCAA+TGG - chr5_4:2021674-2021693 Msa0829060:intron 35.0%
CATTAACCACTTAAGCCAAT+GGG - chr5_4:2021675-2021694 Msa0829060:intron 35.0%
AATTTCAACGATGAACCCAT+TGG + chr5_4:2021693-2021712 None:intergenic 35.0%
!!! ACCTTTTGAGCTTTGTTTGT+AGG - chr5_4:2021982-2022001 Msa0829060:intron 35.0%
TCGTTTATCCTTCTGTCATT+AGG + chr5_4:2022069-2022088 None:intergenic 35.0%
! TGGCATTTTTCATTTTCCCT+TGG - chr5_4:2022259-2022278 Msa0829060:intron 35.0%
CCCCAATTAAGAACAAAGAA+CGG + chr5_4:2022319-2022338 None:intergenic 35.0%
CCGTTCTTTGTTCTTAATTG+GGG - chr5_4:2022316-2022335 Msa0829060:intron 35.0%
GTTATTAACCTAGAACCTGT+AGG + chr5_4:2022513-2022532 None:intergenic 35.0%
GGAAAAGCTTAATGTTACGA+GGG - chr5_4:2022901-2022920 Msa0829060:CDS 35.0%
GGTATTGCTGACAAAAAGAA+AGG - chr5_4:2022922-2022941 Msa0829060:CDS 35.0%
TCAAGATTGAATCGAATGGT+TGG + chr5_4:2022956-2022975 None:intergenic 35.0%
!! AGTCACTTGGTTCTATCAAA+CGG - chr5_4:2023118-2023137 Msa0829060:CDS 35.0%
TTAATTGGATGGGAATTGGA+AGG - chr5_4:2023491-2023510 Msa0829060:intron 35.0%
TAATTGGATGGGAATTGGAA+GGG - chr5_4:2023492-2023511 Msa0829060:intron 35.0%
AACCAATATCAACATGTACC+GGG - chr5_4:2023708-2023727 Msa0829060:intron 35.0%
TCAGAATACCTTGTGATAAC+TGG - chr5_4:2023742-2023761 Msa0829060:intron 35.0%
AAGCTTTACATCGTCAATTC+CGG + chr5_4:2023770-2023789 None:intergenic 35.0%
!! AAAGAAAGCATGGATTTTCC+CGG - chr5_4:2023792-2023811 Msa0829060:intron 35.0%
! TTAGTTTGGCATATTTGAGG+AGG + chr5_4:2023951-2023970 None:intergenic 35.0%
ATCATGAGGGGAAATTAGTT+TGG + chr5_4:2023965-2023984 None:intergenic 35.0%
ATTGGAGAGTTTATCATGAG+GGG + chr5_4:2023977-2023996 None:intergenic 35.0%
GATTGGAGAGTTTATCATGA+GGG + chr5_4:2023978-2023997 None:intergenic 35.0%
TGATTGGAGAGTTTATCATG+AGG + chr5_4:2023979-2023998 None:intergenic 35.0%
AACGAGTTCATTAACGTGAT+TGG + chr5_4:2023995-2024014 None:intergenic 35.0%
CAATGCCAATGTTAAGCAAT+TGG - chr5_4:2024155-2024174 Msa0829060:intron 35.0%
ATCCACCAATTGCTTAACAT+TGG + chr5_4:2024163-2024182 None:intergenic 35.0%
GCTAAGATGAAAGGTGAAAT+TGG - chr5_4:2024267-2024286 Msa0829060:intron 35.0%
!! GTGAAATTGGTTCGAAATTG+AGG - chr5_4:2024280-2024299 Msa0829060:intron 35.0%
AGAAACAGGGAATTAAAGTG+AGG - chr5_4:2024382-2024401 Msa0829060:intron 35.0%
!! ATTCAACACTAGCTTTGCTA+AGG + chr5_4:2024617-2024636 None:intergenic 35.0%
! TATTTTACCCCCTTTGTGAT+TGG - chr5_4:2024846-2024865 Msa0829060:intron 35.0%
ATTGAAACCAATCACAAAGG+GGG + chr5_4:2024856-2024875 None:intergenic 35.0%
ATTTACGAAGATCATAGGAC+GGG - chr5_4:2024906-2024925 Msa0829060:intron 35.0%
GACGGGAGTTAAAAATTCAA+TGG - chr5_4:2024923-2024942 Msa0829060:intron 35.0%
ACTATATTGTGGTTGCAGAT+AGG - chr5_4:2024970-2024989 Msa0829060:intron 35.0%
! ATGTTTAATCTGTCGATTGG+GGG + chr5_4:2025027-2025046 None:intergenic 35.0%
!! TTAAGTGCTGGTTGAAATTC+TGG - chr5_4:2025467-2025486 Msa0829060:intron 35.0%
AGCAATTCTGTATGAGAAGA+AGG - chr5_4:2025546-2025565 Msa0829060:intron 35.0%
TTGTTTGCGAGCATAAAATG+TGG + chr5_4:2025605-2025624 None:intergenic 35.0%
! AATGGTGGTGATAATAATGG+GGG - chr5_4:2025847-2025866 Msa0829060:intron 35.0%
! AATAATGGGGGAATAACTGA+AGG - chr5_4:2025859-2025878 Msa0829060:intron 35.0%
!!! AATTTTGAGGCCCTGTAAAT+TGG + chr5_4:2026269-2026288 None:intergenic 35.0%
TAGTTATATGGTAGCTTGGT+AGG - chr5_4:2026290-2026309 Msa0829060:intron 35.0%
! TTGTTGTTGTTGGTTGATGT+GGG + chr5_4:2026355-2026374 None:intergenic 35.0%
!! TTTGTTGTTGTTGGTTGATG+TGG + chr5_4:2026356-2026375 None:intergenic 35.0%
AAAAAAGTTGAAGGGATGGA+TGG + chr5_4:2026428-2026447 None:intergenic 35.0%
TGGAGAGGAAAAAAGTTGAA+GGG + chr5_4:2026436-2026455 None:intergenic 35.0%
! GAAGATACTCGTGATCATTT+TGG + chr5_4:2027126-2027145 None:intergenic 35.0%
!! GTGATTTTGATGTAGTGATG+AGG + chr5_4:2027153-2027172 None:intergenic 35.0%
! ATGGGGTAACTTGATTTTAC+AGG + chr5_4:2027189-2027208 None:intergenic 35.0%
ACTAAATGGTAAAGCGATGA+TGG + chr5_4:2027306-2027325 None:intergenic 35.0%
! ATTCCTTGAGGATTTCCTTT+TGG - chr5_4:2028121-2028140 Msa0829060:intron 35.0%
GGTTGGCATTACTATTACTT+TGG + chr5_4:2028183-2028202 None:intergenic 35.0%
TGTTAATATCCGCTCTTCTT+TGG + chr5_4:2028204-2028223 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG - chr5_4:2028344-2028363 Msa0829060:intron 35.0%
AGGTGAGAAAAACACAAGAA+GGG - chr5_4:2028345-2028364 Msa0829060:intron 35.0%
AGTTCAGAACTAATATGCAG+TGG - chr5_4:2028465-2028484 Msa0829060:intron 35.0%
GATAAAAACAGAGAGAGAGA+AGG - chr5_4:2028487-2028506 Msa0829060:intron 35.0%
ACATTATAGTGAACTCTCCT+TGG + chr5_4:2028581-2028600 None:intergenic 35.0%
CACTTTAATGCTACATGTAC+TGG - chr5_4:2028734-2028753 Msa0829060:CDS 35.0%
CTTTAATGCTACATGTACTG+GGG - chr5_4:2028736-2028755 Msa0829060:CDS 35.0%
!! AAGCGAAGGTATGCAATTTT+TGG - chr5_4:2028783-2028802 Msa0829060:CDS 35.0%
!! AGCGAAGGTATGCAATTTTT+GGG - chr5_4:2028784-2028803 Msa0829060:CDS 35.0%
ATCATGTTCTTGAAGGATCT+TGG - chr5_4:2028885-2028904 Msa0829060:intron 35.0%
ATACAACAACACGTCTAGTT+GGG + chr5_4:2028960-2028979 None:intergenic 35.0%
ATAAAGCTCCATTGAAGATC+AGG + chr5_4:2028994-2029013 None:intergenic 35.0%
ATACATATATAGGCCTTGCT+TGG + chr5_4:2029064-2029083 None:intergenic 35.0%
TTTGTTTACTTCACACTCCT+TGG - chr5_4:2029113-2029132 Msa0829060:CDS 35.0%
CTCACTCTTACTTTCCTTTA+CGG - chr5_4:2029816-2029835 Msa0829060:intron 35.0%
!!! AGTCCCATTGTTGATGATTT+TGG + chr5_4:2030021-2030040 None:intergenic 35.0%
TCAGAATACCTTGTGATAAC+AGG - chr5_4:2023742-2023761 Msa0829060:intron 35.0%
TAAAACTCGCAAAGAAAGCA+TGG - chr5_4:2030100-2030119 Msa0829060:intron 35.0%
! AAGAAAGCATGGATTATTCC+CGG - chr5_4:2030111-2030130 Msa0829060:intron 35.0%
GAGAACAAAAGGAAGTTTCT+CGG + chr5_4:2030202-2030221 None:intergenic 35.0%
TAAGTTTGGCGTATTTGAGA+AGG + chr5_4:2030269-2030288 None:intergenic 35.0%
ATCATGCGGTGAAATAAGTT+TGG + chr5_4:2030283-2030302 None:intergenic 35.0%
TTGTTCAAGGAATCATCGAA+GGG - chr5_4:2030328-2030347 Msa0829060:intron 35.0%
TATGAGAAATACTCATGACC+AGG + chr5_4:2030507-2030526 None:intergenic 35.0%
GCTAAGATGAAAGGTGAAAT+TGG - chr5_4:2024267-2024286 Msa0829060:intron 35.0%
!! GTGAAATTGGTTCGAAATTG+AGG - chr5_4:2024280-2024299 Msa0829060:intron 35.0%
ACAAAGAGGGAATTAAAGTG+AGG - chr5_4:2030700-2030719 Msa0829060:intron 35.0%
ACTCTTGATCAATGGACAAT+AGG - chr5_4:2031191-2031210 Msa0829060:intron 35.0%
! TTGGTGATTGAAACTTTGGA+TGG - chr5_4:2031600-2031619 Msa0829060:intron 35.0%
ATTGAAACTTTGGATGGTGT+AGG - chr5_4:2031606-2031625 Msa0829060:intron 35.0%
AGCAATTCTGTATGAGAAGA+AGG - chr5_4:2025546-2025565 Msa0829060:intron 35.0%
AAACAACTACACTGCTGTAA+GGG - chr5_4:2031858-2031877 Msa0829060:intron 35.0%
AGGGATTACTGGATGATAAA+TGG - chr5_4:2031877-2031896 Msa0829060:intron 35.0%
GATTACTGGATGATAAATGG+TGG - chr5_4:2031880-2031899 Msa0829060:intron 35.0%
TCATGGACAGTCTTAAACAA+AGG + chr5_4:2021259-2021278 None:intergenic 35.0%
! TTAAGGGCTTTTCTCAGATA+AGG + chr5_4:2032118-2032137 None:intergenic 35.0%
TCTGAGAAAAGCCCTTAATT+AGG - chr5_4:2032120-2032139 Msa0829060:CDS 35.0%
GATTGCTAAGATTAATGCCG+AGG - chr5_4:2021114-2021133 Msa0829060:three_prime_UTR 40.0%
! AATGGTGGTGATAATAGTGG+GGG - chr5_4:2021175-2021194 Msa0829060:CDS 40.0%
! AATAGTGGGGGAATAACTGA+AGG - chr5_4:2021187-2021206 Msa0829060:CDS 40.0%
AGCAACTTCTTTCATACCCA+TGG + chr5_4:2021215-2021234 None:intergenic 40.0%
ATGGGTATGAAAGAAGTTGC+TGG - chr5_4:2021214-2021233 Msa0829060:CDS 40.0%
TGGACAGTCTTAAACAAAGG+TGG + chr5_4:2021256-2021275 None:intergenic 40.0%
CACATGTATCCCACGATAAA+AGG + chr5_4:2021405-2021424 None:intergenic 40.0%
! AACAATTTTTCGCCAGGCTA+GGG + chr5_4:2021602-2021621 None:intergenic 40.0%
GCCTACAAACAAAGCTCAAA+AGG + chr5_4:2021986-2022005 None:intergenic 40.0%
TCAATGTGCCTAATGACAGA+AGG - chr5_4:2022058-2022077 Msa0829060:intron 40.0%
ATAGGAAAGGAATAGAGGAG+TGG + chr5_4:2022198-2022217 None:intergenic 40.0%
TACTGAGATCTCAGAACCAA+GGG + chr5_4:2022278-2022297 None:intergenic 40.0%
ATACTGAGATCTCAGAACCA+AGG + chr5_4:2022279-2022298 None:intergenic 40.0%
! TAATTGGGGTGCTTTGTTGT+AGG - chr5_4:2022330-2022349 Msa0829060:intron 40.0%
AGGGTCATAACTATTGCTCT+TGG + chr5_4:2022716-2022735 None:intergenic 40.0%
CAAAAGTTTGGGAATTGGCA+GGG + chr5_4:2022735-2022754 None:intergenic 40.0%
TCAAAAGTTTGGGAATTGGC+AGG + chr5_4:2022736-2022755 None:intergenic 40.0%
GGGAAAAGCTTAATGTTACG+AGG - chr5_4:2022900-2022919 Msa0829060:CDS 40.0%
TTCCAGTGTCATCGTCAAAT+GGG + chr5_4:2023009-2023028 None:intergenic 40.0%
AGTAAGAGTTCAACAAGGAC+TGG - chr5_4:2023069-2023088 Msa0829060:CDS 40.0%
GTTTGATAGAACCAAGTGAC+TGG + chr5_4:2023119-2023138 None:intergenic 40.0%
GTTCTATCAAACGGAACACA+CGG - chr5_4:2023127-2023146 Msa0829060:CDS 40.0%
! GGAGAGAAATGTACTGACAA+TGG + chr5_4:2023355-2023374 None:intergenic 40.0%
TACCCGGTACATGTTGATAT+TGG + chr5_4:2023713-2023732 None:intergenic 40.0%
! ATTCTGATGCTTTTGCTACC+CGG + chr5_4:2023729-2023748 None:intergenic 40.0%
!! AAGAAAGCATGGATTTTCCC+GGG - chr5_4:2023793-2023812 Msa0829060:intron 40.0%
! ACTTCGAAGGTGTAATTCAC+CGG + chr5_4:2023847-2023866 None:intergenic 40.0%
CACGTTAATGAACTCGTTCA+AGG - chr5_4:2023997-2024016 Msa0829060:intron 40.0%
TGCTTCAATGACAATGGAAG+AGG - chr5_4:2024050-2024069 Msa0829060:intron 40.0%
! ACAATGGAAGAGGTTTTCAG+AGG - chr5_4:2024060-2024079 Msa0829060:intron 40.0%
TGCCAATGTTAAGCAATTGG+TGG - chr5_4:2024158-2024177 Msa0829060:intron 40.0%
!! ATTGGTTCGAAATTGAGGGA+AGG - chr5_4:2024285-2024304 Msa0829060:intron 40.0%
GAAAATTGATGCAGAGACGA+AGG - chr5_4:2024329-2024348 Msa0829060:intron 40.0%
AGCTTTCTTCTTAGCCAACT+CGG + chr5_4:2024463-2024482 None:intergenic 40.0%
!! AGCTTTAAGCTTCTCAGTAG+TGG + chr5_4:2024589-2024608 None:intergenic 40.0%
CTTCGTAAATATGCAGTGCA+CGG + chr5_4:2024896-2024915 None:intergenic 40.0%
TGTTGAGTTAGCAAGTGCTA+TGG - chr5_4:2025268-2025287 Msa0829060:intron 40.0%
GTTGAAATTCTGGATGCTCT+AGG - chr5_4:2025477-2025496 Msa0829060:intron 40.0%
GCAAAGAAAAAAGAGGCAGA+GGG - chr5_4:2025646-2025665 Msa0829060:intron 40.0%
CAAAGAAAAAAGAGGCAGAG+GGG - chr5_4:2025647-2025666 Msa0829060:intron 40.0%
AGTACACTTCTCAATGCACT+TGG - chr5_4:2025706-2025725 Msa0829060:intron 40.0%
GTACACTTCTCAATGCACTT+GGG - chr5_4:2025707-2025726 Msa0829060:intron 40.0%
GAACAACTACACAGCTGTAA+GGG - chr5_4:2025729-2025748 Msa0829060:intron 40.0%
GATTGCTAAGATTAATGCCG+AGG - chr5_4:2021114-2021133 Msa0829060:three_prime_UTR 40.0%
AGCAACTTCTTTCATACCCA+TGG + chr5_4:2021215-2021234 None:intergenic 40.0%
ATGGGTATGAAAGAAGTTGC+TGG - chr5_4:2021214-2021233 Msa0829060:CDS 40.0%
TCATGGACAGTCTTAAACAG+AGG + chr5_4:2025931-2025950 None:intergenic 40.0%
GAGGAAAAAAGTTGAAGGGA+TGG + chr5_4:2026432-2026451 None:intergenic 40.0%
CTGGAGAGGAAAAAAGTTGA+AGG + chr5_4:2026437-2026456 None:intergenic 40.0%
!!! CTTCAACTTTTTTCCTCTCC+AGG - chr5_4:2026435-2026454 Msa0829060:intron 40.0%
!! ATGATGGACACGATCATGTT+GGG + chr5_4:2027290-2027309 None:intergenic 40.0%
!! AATAGTGGGTTGGACCTAAA+CGG + chr5_4:2027514-2027533 None:intergenic 40.0%
! TTTTGACCCTGTATTCCTTG+AGG - chr5_4:2028109-2028128 Msa0829060:intron 40.0%
GGAAATCCTCAAGGAATACA+GGG + chr5_4:2028118-2028137 None:intergenic 40.0%
AGGAAATCCTCAAGGAATAC+AGG + chr5_4:2028119-2028138 None:intergenic 40.0%
GAACCAAAAGGAAATCCTCA+AGG + chr5_4:2028127-2028146 None:intergenic 40.0%
TAATGCCAACCAAAGAAGAG+CGG - chr5_4:2028192-2028211 Msa0829060:intron 40.0%
AATATCCGCTCTTCTTTGGT+TGG + chr5_4:2028200-2028219 None:intergenic 40.0%
GTCGAGAGATGAATGATCAA+AGG + chr5_4:2028304-2028323 None:intergenic 40.0%
TTCACATGGAACTGACACTT+TGG + chr5_4:2028326-2028345 None:intergenic 40.0%
! AAAGTGTCAGTTCCATGTGA+AGG - chr5_4:2028325-2028344 Msa0829060:intron 40.0%
! GTGTTTTTCTCACCTTCACA+TGG + chr5_4:2028340-2028359 None:intergenic 40.0%
GGTGAGAAAAACACAAGAAG+GGG - chr5_4:2028346-2028365 Msa0829060:intron 40.0%
GTGAGAAAAACACAAGAAGG+GGG - chr5_4:2028347-2028366 Msa0829060:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG - chr5_4:2028348-2028367 Msa0829060:intron 40.0%
ATACAGTTCCTTCCACAAAC+CGG - chr5_4:2028530-2028549 Msa0829060:intron 40.0%
!!! CCACAATTTTAACTCGTCCT+TGG + chr5_4:2028697-2028716 None:intergenic 40.0%
CCAAGGACGAGTTAAAATTG+TGG - chr5_4:2028694-2028713 Msa0829060:CDS 40.0%
TAAAATTGTGGTGTGTCTCG+TGG - chr5_4:2028706-2028725 Msa0829060:CDS 40.0%
!! GGTATGCAATTTTTGGGCTA+AGG - chr5_4:2028790-2028809 Msa0829060:CDS 40.0%
!! ATGCAATTTTTGGGCTAAGG+AGG - chr5_4:2028793-2028812 Msa0829060:CDS 40.0%
CATACAACAACACGTCTAGT+TGG + chr5_4:2028961-2028980 None:intergenic 40.0%
AGAAGTTAAGCTGGATCACT+TGG + chr5_4:2029271-2029290 None:intergenic 40.0%
!! GCCATTGAAAAATGGGTTGA+CGG + chr5_4:2029587-2029606 None:intergenic 40.0%
CGGATCCTATCCAATAGTAT+TGG + chr5_4:2029678-2029697 None:intergenic 40.0%
CAAAAGAAGTAACGCCGTAA+AGG + chr5_4:2029833-2029852 None:intergenic 40.0%
! TACGGCGTTACTTCTTTTGA+TGG - chr5_4:2029834-2029853 Msa0829060:intron 40.0%
! ACTTCGAAGGTGTAGTTTAC+CGG + chr5_4:2030165-2030184 None:intergenic 40.0%
ACTCATAGCTTGAACTTCGA+AGG + chr5_4:2030178-2030197 None:intergenic 40.0%
! TGATTGGAGTGTCTATCATG+CGG + chr5_4:2030297-2030316 None:intergenic 40.0%
CTTGTTCAAGGAATCATCGA+AGG - chr5_4:2030327-2030346 Msa0829060:intron 40.0%
TGTTCAAGGAATCATCGAAG+GGG - chr5_4:2030329-2030348 Msa0829060:intron 40.0%
CAATGCGAATGTTAAGCAAC+TGG - chr5_4:2030473-2030492 Msa0829060:intron 40.0%
!! ATTGGTTCGAAATTGAGGCA+AGG - chr5_4:2030603-2030622 Msa0829060:intron 40.0%
TAAAGTGAGGACTGAAGTGA+AGG - chr5_4:2024395-2024414 Msa0829060:intron 40.0%
!! GGTTTTTGAGAATCAGAGAG+AGG - chr5_4:2030734-2030753 Msa0829060:intron 40.0%
! TTCTGAGTTGGCTAAGAAGA+AGG - chr5_4:2030776-2030795 Msa0829060:intron 40.0%
AGTTACAAGGTGAAGTTGAG+AGG - chr5_4:2030868-2030887 Msa0829060:intron 40.0%
!! ATTGAACACTGGCTTTGCTA+AGG + chr5_4:2030935-2030954 None:intergenic 40.0%
! GATCAAGAGTGTGACTCATT+TGG + chr5_4:2031181-2031200 None:intergenic 40.0%
TGAGTCACACTCTTGATCAA+TGG - chr5_4:2031183-2031202 Msa0829060:intron 40.0%
TGTAGGTACAAGAAGCAAAC+TGG - chr5_4:2031623-2031642 Msa0829060:intron 40.0%
GTAGGTACAAGAAGCAAACT+GGG - chr5_4:2031624-2031643 Msa0829060:intron 40.0%
GCTGTACAAGAAACAGAAAG+AGG - chr5_4:2031648-2031667 Msa0829060:intron 40.0%
TGCAAAGAAAAAAGAGGCAG+AGG - chr5_4:2031774-2031793 Msa0829060:intron 40.0%
GCAAAGAAAAAAGAGGCAGA+GGG - chr5_4:2025646-2025665 Msa0829060:intron 40.0%
CAAAGAAAAAAGAGGCAGAG+GGG - chr5_4:2025647-2025666 Msa0829060:intron 40.0%
GAAACAACTACACTGCTGTA+AGG - chr5_4:2031857-2031876 Msa0829060:intron 40.0%
GATTGCTAAGATTAATGCCG+AGG - chr5_4:2021114-2021133 Msa0829060:three_prime_UTR 40.0%
! AGTGGTGGTGAAAAAACTGA+AGG - chr5_4:2031988-2032007 Msa0829060:intron 40.0%
!! TGAAAAAACTGAAGGTGCCA+TGG - chr5_4:2031996-2032015 Msa0829060:intron 40.0%
!! GAAAAAACTGAAGGTGCCAT+GGG - chr5_4:2031997-2032016 Msa0829060:intron 40.0%
AGCAACTTCTTTCATACCCA+TGG + chr5_4:2021215-2021234 None:intergenic 40.0%
ATGGGTATGAAAGAAGTTGC+TGG - chr5_4:2021214-2021233 Msa0829060:CDS 40.0%
TGGACAGTCTTAAACAAAGG+TGG + chr5_4:2021256-2021275 None:intergenic 40.0%
TAAGACTGTCCATGAGCAAA+CGG - chr5_4:2021264-2021283 Msa0829060:CDS 40.0%
TGCTAAGATTAATGCCGAGG+CGG - chr5_4:2021117-2021136 Msa0829060:three_prime_UTR 45.0%
!! GGAATAACTGAAGGTGCCAT+GGG - chr5_4:2021196-2021215 Msa0829060:CDS 45.0%
AAGACTGTCCATGAGCAAAC+AGG - chr5_4:2021265-2021284 Msa0829060:CDS 45.0%
! GAACAATTTTTCGCCAGGCT+AGG + chr5_4:2021603-2021622 None:intergenic 45.0%
! GTTCGGAACAATTTTTCGCC+AGG + chr5_4:2021608-2021627 None:intergenic 45.0%
!! GATGAACCCATTGGCTTAAG+TGG + chr5_4:2021684-2021703 None:intergenic 45.0%
! GCAAGGACATTGTTGGTGTT+CGG - chr5_4:2021932-2021951 Msa0829060:intron 45.0%
GGAATAGAGGAGTGGAGTAT+AGG + chr5_4:2022190-2022209 None:intergenic 45.0%
ACAAAAGAAGCAGTGGCAGA+AGG + chr5_4:2022358-2022377 None:intergenic 45.0%
AGCAGGAAGCTAAAGCAGAA+CGG + chr5_4:2022414-2022433 None:intergenic 45.0%
GATGACAGACATTTCCCTAC+AGG - chr5_4:2022495-2022514 Msa0829060:CDS 45.0%
GACATTTCCCTACAGGTTCT+AGG - chr5_4:2022502-2022521 Msa0829060:CDS 45.0%
ATCCCATTTGACGATGACAC+TGG - chr5_4:2023004-2023023 Msa0829060:CDS 45.0%
CTTCCAGTGTCATCGTCAAA+TGG + chr5_4:2023010-2023029 None:intergenic 45.0%
TGATAGAACCAAGTGACTGG+AGG + chr5_4:2023116-2023135 None:intergenic 45.0%
ACTCATGGCTTGAACTTCGA+AGG + chr5_4:2023860-2023879 None:intergenic 45.0%
! AGGGAGTTTTTCTGCACTCA+TGG + chr5_4:2023875-2023894 None:intergenic 45.0%
ACGAGGACCTATTGTGAAGA+CGG + chr5_4:2023911-2023930 None:intergenic 45.0%
CTTTCGTAATCGTCAACACG+AGG + chr5_4:2023928-2023947 None:intergenic 45.0%
CTCGTTCAAGGAATCATCGA+AGG - chr5_4:2024009-2024028 Msa0829060:intron 45.0%
CCATTGTCATTGAAGCAACG+AGG + chr5_4:2024047-2024066 None:intergenic 45.0%
CCTCGTTGCTTCAATGACAA+TGG - chr5_4:2024044-2024063 Msa0829060:intron 45.0%
! TTTGGGACAAAAGACGCAGA+TGG - chr5_4:2024209-2024228 Msa0829060:intron 45.0%
GTGGCAGAAGCTAAGATGAA+AGG - chr5_4:2024258-2024277 Msa0829060:intron 45.0%
! CATCAATTTTCGCTGCGTTC+TGG + chr5_4:2024320-2024339 None:intergenic 45.0%
GAAGGTTATTGCGATGCAGA+GGG - chr5_4:2024347-2024366 Msa0829060:intron 45.0%
GAATCAAAGAGAGGCTGAAG+TGG - chr5_4:2024425-2024444 Msa0829060:intron 45.0%
TGGCTAAGAAGAAAGCTGCT+TGG - chr5_4:2024466-2024485 Msa0829060:intron 45.0%
GAAGAAAGCTGCTTGGACAA+TGG - chr5_4:2024473-2024492 Msa0829060:intron 45.0%
TCTAGGTACAAGAGGCTAAC+TGG - chr5_4:2025494-2025513 Msa0829060:intron 45.0%
CTAGGTACAAGAGGCTAACT+GGG - chr5_4:2025495-2025514 Msa0829060:intron 45.0%
TCTGTATGAGAAGAAGGCAG+AGG - chr5_4:2025552-2025571 Msa0829060:intron 45.0%
CGCAAAGAAAAAAGAGGCAG+AGG - chr5_4:2025645-2025664 Msa0829060:intron 45.0%
GGAACAACTACACAGCTGTA+AGG - chr5_4:2025728-2025747 Msa0829060:intron 45.0%
TGCTAAGATTAATGCCGAGG+CGG - chr5_4:2021117-2021136 Msa0829060:three_prime_UTR 45.0%
!! GGAATAACTGAAGGTGCCAT+GGG - chr5_4:2021196-2021215 Msa0829060:CDS 45.0%
TGGACAGTCTTAAACAGAGG+TGG + chr5_4:2025928-2025947 None:intergenic 45.0%
AAGACTGTCCATGAGCAAAC+AGG - chr5_4:2021265-2021284 Msa0829060:CDS 45.0%
CAAGGACAATCATCACATCG+TGG - chr5_4:2026193-2026212 Msa0829060:intron 45.0%
! GTTGTTGGTTGATGTGGGTT+AGG + chr5_4:2026350-2026369 None:intergenic 45.0%
! GAATTGCAGAGATGGTGGTT+GGG + chr5_4:2026496-2026515 None:intergenic 45.0%
! AGAATTGCAGAGATGGTGGT+TGG + chr5_4:2026497-2026516 None:intergenic 45.0%
AGAGAGGAGAATTGCAGAGA+TGG + chr5_4:2026504-2026523 None:intergenic 45.0%
! TGATGGACACGATCATGTTG+GGG + chr5_4:2027289-2027308 None:intergenic 45.0%
!! GATGATGGACACGATCATGT+TGG + chr5_4:2027291-2027310 None:intergenic 45.0%
!! ATAGTGGGTTGGACCTAAAC+GGG + chr5_4:2027513-2027532 None:intergenic 45.0%
!!! GTTTTTGGCGGGCTAATAGT+GGG + chr5_4:2027528-2027547 None:intergenic 45.0%
CACTATTAGCCCGCCAAAAA+CGG - chr5_4:2027527-2027546 Msa0829060:intron 45.0%
ACTATTAGCCCGCCAAAAAC+GGG - chr5_4:2027528-2027547 Msa0829060:intron 45.0%
TTCAGCTACAGTTTCCTAGC+AGG - chr5_4:2028267-2028286 Msa0829060:intron 45.0%
AGGAAAATAACGCTCCTGCT+AGG + chr5_4:2028284-2028303 None:intergenic 45.0%
GAGAAAAACACAAGAAGGGG+GGG - chr5_4:2028349-2028368 Msa0829060:intron 45.0%
AGAAAAACACAAGAAGGGGG+GGG - chr5_4:2028350-2028369 Msa0829060:intron 45.0%
! ACATGACTACTTCCGGTTTG+TGG + chr5_4:2028545-2028564 None:intergenic 45.0%
AAGGGGAACATGACTACTTC+CGG + chr5_4:2028552-2028571 None:intergenic 45.0%
! AACTCTCCTTGGAAGTGCAA+GGG + chr5_4:2028570-2028589 None:intergenic 45.0%
ATGCTACATGTACTGGGGAA+AGG - chr5_4:2028741-2028760 Msa0829060:CDS 45.0%
TGCTACATGTACTGGGGAAA+GGG - chr5_4:2028742-2028761 Msa0829060:CDS 45.0%
TAAGGAGGTAGAGATGAGAG+TGG - chr5_4:2028808-2028827 Msa0829060:CDS 45.0%
CATTGTTGACCGTTCAACGT+TGG - chr5_4:2028910-2028929 Msa0829060:CDS 45.0%
!! GCCGTCAACCCATTTTTCAA+TGG - chr5_4:2029583-2029602 Msa0829060:CDS 45.0%
GGGACTTTATCGTGTAGCAA+AGG - chr5_4:2030035-2030054 Msa0829060:intron 45.0%
AGGACCAATTGTGAAGACAG+CGG + chr5_4:2030226-2030245 None:intergenic 45.0%
TGCGAATGTTAAGCAACTGG+TGG - chr5_4:2030476-2030495 Msa0829060:intron 45.0%
! TTTGGGACAAAAGACGCAGA+TGG - chr5_4:2024209-2024228 Msa0829060:intron 45.0%
GTGGCAGAAGCTAAGATGAA+AGG - chr5_4:2024258-2024277 Msa0829060:intron 45.0%
! GTTATTTCGCTGCAGAGAAC+TGG - chr5_4:2030669-2030688 Msa0829060:intron 45.0%
CTAAGGGATGCTGAGTTACA+AGG - chr5_4:2030855-2030874 Msa0829060:intron 45.0%
TCTGTATGAGAAGAAGGCAG+AGG - chr5_4:2025552-2025571 Msa0829060:intron 45.0%
ACACTGCTGTAAGGGATTAC+TGG - chr5_4:2031866-2031885 Msa0829060:intron 45.0%
! TGGACTAATGGTGGTGATAG+TGG - chr5_4:2031970-2031989 Msa0829060:intron 45.0%
!! ACTAATGGTGGTGATAGTGG+TGG - chr5_4:2031973-2031992 Msa0829060:intron 45.0%
AAGACTGTCCATGAGCAAAC+GGG - chr5_4:2021265-2021284 Msa0829060:CDS 45.0%
!!! AATTTTTTATTTTTTTGAAA+GGG + chr5_4:2022535-2022554 None:intergenic 5.0%
!!! TAATTTTTTATTTTTTTGAA+AGG + chr5_4:2022536-2022555 None:intergenic 5.0%
!!! AAATTTATGTTTTTTTTATT+AGG - chr5_4:2026610-2026629 Msa0829060:intron 5.0%
!! TTTAATAAAAAAACAATAAA+TGG - chr5_4:2027098-2027117 Msa0829060:intron 5.0%
!! AAAATATTTAAAAAAATAGA+CGG + chr5_4:2027634-2027653 None:intergenic 5.0%
!! GGGAATAACTGAAGGTGCCA+TGG - chr5_4:2021195-2021214 Msa0829060:CDS 50.0%
GCAACATGCCTGTTTGCTCA+TGG + chr5_4:2021276-2021295 None:intergenic 50.0%
ATGTTGCCTCCTGCTTGGAT+GGG - chr5_4:2021289-2021308 Msa0829060:CDS 50.0%
TGTTGGCATTAACCCTAGCC+TGG - chr5_4:2021587-2021606 Msa0829060:CDS 50.0%
! ATTAGTCTCCTGCAGCAGCA+AGG - chr5_4:2021915-2021934 Msa0829060:intron 50.0%
AACAATGTCCTTGCTGCTGC+AGG + chr5_4:2021926-2021945 None:intergenic 50.0%
TGCAGCAGCAAGGACATTGT+TGG - chr5_4:2021925-2021944 Msa0829060:intron 50.0%
! AGTTCAACAAGGACTGGCAG+CGG - chr5_4:2023075-2023094 Msa0829060:CDS 50.0%
TACCTTGTGATAACTGGCGC+CGG - chr5_4:2023748-2023767 Msa0829060:intron 50.0%
AGGTGTAATTCACCGGTGAG+AGG + chr5_4:2023840-2023859 None:intergenic 50.0%
GACCTATTGTGAAGACGGCA+GGG + chr5_4:2023906-2023925 None:intergenic 50.0%
! AAGCAATTGGTGGATGTGCC+TGG - chr5_4:2024168-2024187 Msa0829060:intron 50.0%
TGGAAGCAGCGAATCAAGCT+AGG - chr5_4:2024229-2024248 Msa0829060:intron 50.0%
GGAAGCAGCGAATCAAGCTA+GGG - chr5_4:2024230-2024249 Msa0829060:intron 50.0%
GAATCAAGCTAGGGTTGACG+TGG - chr5_4:2024239-2024258 Msa0829060:intron 50.0%
CGAAGGTTATTGCGATGCAG+AGG - chr5_4:2024346-2024365 Msa0829060:intron 50.0%
GCTGGAGAAGGTGAGAAACA+GGG - chr5_4:2024369-2024388 Msa0829060:intron 50.0%
GAAAGCTGCTTGGACAATGG+CGG - chr5_4:2024476-2024495 Msa0829060:intron 50.0%
!! TGCTAAAGCCGTGGCTCTAA+GGG - chr5_4:2024521-2024540 Msa0829060:intron 50.0%
CTAAGGGAAGCTGAGTTGCA+AGG - chr5_4:2024537-2024556 Msa0829060:intron 50.0%
AGTTGCAAGGTGAGGTTGAG+AGG - chr5_4:2024550-2024569 Msa0829060:intron 50.0%
AATATGCAGTGCACGGACGT+AGG + chr5_4:2024889-2024908 None:intergenic 50.0%
! CTGGATGCTCTAGGTACAAG+AGG - chr5_4:2025486-2025505 Msa0829060:intron 50.0%
! GGCAGAAGCGCAAAAAGCTT+TGG - chr5_4:2025573-2025592 Msa0829060:intron 50.0%
CAGAGGGGATTGTGACACTT+GGG - chr5_4:2025662-2025681 Msa0829060:intron 50.0%
GTGACACTTGGGAATGCTCA+AGG - chr5_4:2025673-2025692 Msa0829060:intron 50.0%
!! GGGAATAACTGAAGGTGCCA+TGG - chr5_4:2021195-2021214 Msa0829060:CDS 50.0%
GCAACATGCCTGTTTGCTCA+TGG + chr5_4:2021276-2021295 None:intergenic 50.0%
GGTAAAGATCCCATCCAAGC+CGG + chr5_4:2025973-2025992 None:intergenic 50.0%
GAGGAGAATTGCAGAGATGG+TGG + chr5_4:2026501-2026520 None:intergenic 50.0%
GCACACTAATACACGATGCG+TGG - chr5_4:2026761-2026780 Msa0829060:intron 50.0%
GATGGACACGATCATGTTGG+GGG + chr5_4:2027288-2027307 None:intergenic 50.0%
!! TAGTGGGTTGGACCTAAACG+GGG + chr5_4:2027512-2027531 None:intergenic 50.0%
!!! CGTTTTTGGCGGGCTAATAG+TGG + chr5_4:2027529-2027548 None:intergenic 50.0%
CTATTAGCCCGCCAAAAACG+GGG - chr5_4:2027529-2027548 Msa0829060:intron 50.0%
GAAAAACACAAGAAGGGGGG+GGG - chr5_4:2028351-2028370 Msa0829060:intron 50.0%
AAAAACACAAGAAGGGGGGG+GGG - chr5_4:2028352-2028371 Msa0829060:intron 50.0%
! GACTACTTCCGGTTTGTGGA+AGG + chr5_4:2028541-2028560 None:intergenic 50.0%
ATGTTCCCCTTGCACTTCCA+AGG - chr5_4:2028561-2028580 Msa0829060:intron 50.0%
! ACTCTCCTTGGAAGTGCAAG+GGG + chr5_4:2028569-2028588 None:intergenic 50.0%
! GAACTCTCCTTGGAAGTGCA+AGG + chr5_4:2028571-2028590 None:intergenic 50.0%
! AAGGGTGTGAAGTCGGTTCA+TGG - chr5_4:2028760-2028779 Msa0829060:CDS 50.0%
! AAGTCGGTTCATGGAAGCGA+AGG - chr5_4:2028769-2028788 Msa0829060:CDS 50.0%
TGTTGACCGTTCAACGTTGG+AGG - chr5_4:2028913-2028932 Msa0829060:CDS 50.0%
TACAGGCCTCCAACGTTGAA+CGG + chr5_4:2028922-2028941 None:intergenic 50.0%
TTCAACGTTGGAGGCCTGTA+TGG - chr5_4:2028922-2028941 Msa0829060:CDS 50.0%
AGGTGTAGTTTACCGGTGAG+AGG + chr5_4:2030158-2030177 None:intergenic 50.0%
AAGACAGCGGGGAGAACAAA+AGG + chr5_4:2030213-2030232 None:intergenic 50.0%
GACCAATTGTGAAGACAGCG+GGG + chr5_4:2030224-2030243 None:intergenic 50.0%
GGACCAATTGTGAAGACAGC+GGG + chr5_4:2030225-2030244 None:intergenic 50.0%
CTTTCCTGATCGTCAACACG+AGG + chr5_4:2030246-2030265 None:intergenic 50.0%
! ACTTGCTGCTTCCATGACGA+TGG - chr5_4:2030362-2030381 Msa0829060:intron 50.0%
GAAAACCTCCTCCATCGTCA+TGG + chr5_4:2030376-2030395 None:intergenic 50.0%
! ACGATGGAGGAGGTTTTCAG+AGG - chr5_4:2030378-2030397 Msa0829060:intron 50.0%
TGGAAGCAGCGAATCAAGCT+AGG - chr5_4:2024229-2024248 Msa0829060:intron 50.0%
GGAAGCAGCGAATCAAGCTA+GGG - chr5_4:2024230-2024249 Msa0829060:intron 50.0%
GAATCAAGCTAGGGTTGACG+TGG - chr5_4:2024239-2024258 Msa0829060:intron 50.0%
AACTGGAGAGGGTGACAAAG+AGG - chr5_4:2030686-2030705 Msa0829060:intron 50.0%
ACTGGAGAGGGTGACAAAGA+GGG - chr5_4:2030687-2030706 Msa0829060:intron 50.0%
GAATCAGAGAGAGGCTGAAG+TGG - chr5_4:2030743-2030762 Msa0829060:intron 50.0%
TGGCTAAGAAGAAGGCAGCT+TGG - chr5_4:2030784-2030803 Msa0829060:intron 50.0%
GAAGAAGGCAGCTTGGACTA+AGG - chr5_4:2030791-2030810 Msa0829060:intron 50.0%
! GGCAGAAGCACAGAAAGCAT+TGG - chr5_4:2031702-2031721 Msa0829060:intron 50.0%
CAGAGGGGATTGTGACACTT+GGG - chr5_4:2025662-2025681 Msa0829060:intron 50.0%
GTGACACTTGGGAATGCTCA+AGG - chr5_4:2025673-2025692 Msa0829060:intron 50.0%
ATTAATGCCGAGGCAGTACG+CGG - chr5_4:2031925-2031944 Msa0829060:intron 50.0%
ATGTTGCCTCCTGCTTGGAT+GGG - chr5_4:2021289-2021308 Msa0829060:CDS 50.0%
ATTAATGCCGAGGCGGTACG+TGG - chr5_4:2021124-2021143 Msa0829060:three_prime_UTR 55.0%
CATGTTGCCTCCTGCTTGGA+TGG - chr5_4:2021288-2021307 Msa0829060:CDS 55.0%
AAGGATCCCATCCAAGCAGG+AGG + chr5_4:2021298-2021317 None:intergenic 55.0%
GGTAAGGATCCCATCCAAGC+AGG + chr5_4:2021301-2021320 None:intergenic 55.0%
CCAAGTGACTGGAGGAGATG+CGG + chr5_4:2023108-2023127 None:intergenic 55.0%
TTCCGGCGCCAGTTATCACA+AGG + chr5_4:2023753-2023772 None:intergenic 55.0%
AAGACGGTGCAGGATTGACC+CGG + chr5_4:2023814-2023833 None:intergenic 55.0%
AGACGGCAGGGAGAACGAAA+GGG + chr5_4:2023894-2023913 None:intergenic 55.0%
AAGACGGCAGGGAGAACGAA+AGG + chr5_4:2023895-2023914 None:intergenic 55.0%
CTCCCTGCCGTCTTCACAAT+AGG - chr5_4:2023901-2023920 Msa0829060:intron 55.0%
GGACCTATTGTGAAGACGGC+AGG + chr5_4:2023907-2023926 None:intergenic 55.0%
GTTATTGCGATGCAGAGGGC+TGG - chr5_4:2024351-2024370 Msa0829060:intron 55.0%
GGCTGGAGAAGGTGAGAAAC+AGG - chr5_4:2024368-2024387 Msa0829060:intron 55.0%
AAGAGAGGCTGAAGTGGCTG+AGG - chr5_4:2024431-2024450 Msa0829060:intron 55.0%
GGCTGAGGCTAATTCCGAGT+TGG - chr5_4:2024446-2024465 Msa0829060:intron 55.0%
TTGGACAATGGCGGCTCAAG+TGG - chr5_4:2024485-2024504 Msa0829060:intron 55.0%
! CTGCTAAAGCCGTGGCTCTA+AGG - chr5_4:2024520-2024539 Msa0829060:intron 55.0%
CTCAGCTTCCCTTAGAGCCA+CGG + chr5_4:2024532-2024551 None:intergenic 55.0%
GGAAGCTGAGTTGCAAGGTG+AGG - chr5_4:2024542-2024561 Msa0829060:intron 55.0%
GCAGAGGGGATTGTGACACT+TGG - chr5_4:2025661-2025680 Msa0829060:intron 55.0%
ATTAATGCCGAGGCGGTACG+CGG - chr5_4:2021124-2021143 Msa0829060:three_prime_UTR 55.0%
GCAAACAGGCATGTTGCCTC+CGG - chr5_4:2021279-2021298 Msa0829060:CDS 55.0%
!! ATGTTGCCTCCGGCTTGGAT+GGG - chr5_4:2025961-2025980 Msa0829060:intron 55.0%
AAAGATCCCATCCAAGCCGG+AGG + chr5_4:2025970-2025989 None:intergenic 55.0%
GGTAATAGCGGTGAGAGGGA+TGG + chr5_4:2026464-2026483 None:intergenic 55.0%
GCACGGTAATAGCGGTGAGA+GGG + chr5_4:2026468-2026487 None:intergenic 55.0%
ACACGATCATGTTGGGGGTG+GGG + chr5_4:2027283-2027302 None:intergenic 55.0%
GACACGATCATGTTGGGGGT+GGG + chr5_4:2027284-2027303 None:intergenic 55.0%
!! TTGGCGGGCTAATAGTGGGT+TGG + chr5_4:2027524-2027543 None:intergenic 55.0%
AAAACACAAGAAGGGGGGGG+GGG - chr5_4:2028353-2028372 Msa0829060:intron 55.0%
! CTGGGGAAAGGGTGTGAAGT+CGG - chr5_4:2028753-2028772 Msa0829060:CDS 55.0%
GGACTGTTGCTGCTCCATAC+AGG + chr5_4:2028939-2028958 None:intergenic 55.0%
AAGACGGAGCAGGATTGACC+GGG + chr5_4:2030132-2030151 None:intergenic 55.0%
CAAGACGGAGCAGGATTGAC+CGG + chr5_4:2030133-2030152 None:intergenic 55.0%
TACCGGTGAGAGGTCCAAGA+CGG + chr5_4:2030148-2030167 None:intergenic 55.0%
CTCCCCGCTGTCTTCACAAT+TGG - chr5_4:2030219-2030238 Msa0829060:intron 55.0%
! TGGTCCTCGTGTTGACGATC+AGG - chr5_4:2030239-2030258 Msa0829060:intron 55.0%
! TGCTGCTTCCATGACGATGG+AGG - chr5_4:2030365-2030384 Msa0829060:intron 55.0%
TGCTTCCATGACGATGGAGG+AGG - chr5_4:2030368-2030387 Msa0829060:intron 55.0%
! AAGCAACTGGTGGATGTGCC+TGG - chr5_4:2030486-2030505 Msa0829060:intron 55.0%
TTCGCTGCAGAGAACTGGAG+AGG - chr5_4:2030674-2030693 Msa0829060:intron 55.0%
TCGCTGCAGAGAACTGGAGA+GGG - chr5_4:2030675-2030694 Msa0829060:intron 55.0%
TCAGAGAGAGGCTGAAGTGG+CGG - chr5_4:2030746-2030765 Msa0829060:intron 55.0%
GGCGGAGGCTAATTCTGAGT+TGG - chr5_4:2030764-2030783 Msa0829060:intron 55.0%
GAAGGCAGCTTGGACTAAGG+CGG - chr5_4:2030794-2030813 Msa0829060:intron 55.0%
GGCTGAAGTAGAGGCGAAGA+AGG - chr5_4:2030824-2030843 Msa0829060:intron 55.0%
!! GAAGAAGGCCGTGGCTCTAA+GGG - chr5_4:2030839-2030858 Msa0829060:intron 55.0%
CTCAGCATCCCTTAGAGCCA+CGG + chr5_4:2030850-2030869 None:intergenic 55.0%
GCAGAGGGGATTGTGACACT+TGG - chr5_4:2025661-2025680 Msa0829060:intron 55.0%
GCAACATGCCCGTTTGCTCA+TGG + chr5_4:2032077-2032096 None:intergenic 55.0%
CATGTTGCCTCCTGCTTGGA+TGG - chr5_4:2021288-2021307 Msa0829060:CDS 55.0%
GATAAGGCTCCCATCCAAGC+AGG + chr5_4:2032102-2032121 None:intergenic 55.0%
CTCAAGTCCACGTACCGCCT+CGG + chr5_4:2021134-2021153 None:intergenic 60.0%
CAGGCATGTTGCCTCCTGCT+TGG - chr5_4:2021284-2021303 Msa0829060:CDS 60.0%
CCGCATCTCCTCCAGTCACT+TGG - chr5_4:2023105-2023124 Msa0829060:CDS 60.0%
AGACGGTGCAGGATTGACCC+GGG + chr5_4:2023813-2023832 None:intergenic 60.0%
TGAGAGGTCGAAGACGGTGC+AGG + chr5_4:2023824-2023843 None:intergenic 60.0%
CACCGTCTTCGACCTCTCAC+CGG - chr5_4:2023825-2023844 Msa0829060:intron 60.0%
CACCGGTGAGAGGTCGAAGA+CGG + chr5_4:2023830-2023849 None:intergenic 60.0%
GGCTCAAGTGGCTGAGCTTG+AGG - chr5_4:2024497-2024516 Msa0829060:intron 60.0%
GCTTGAGGCTGCTAAAGCCG+TGG - chr5_4:2024512-2024531 Msa0829060:intron 60.0%
!! CATGTTGCCTCCGGCTTGGA+TGG - chr5_4:2025960-2025979 Msa0829060:intron 60.0%
AGAGGGATGGTGTCCTGGAG+AGG + chr5_4:2026451-2026470 None:intergenic 60.0%
GGCACGGTAATAGCGGTGAG+AGG + chr5_4:2026469-2026488 None:intergenic 60.0%
! CAGAGATGGTGGTTGGGCAG+CGG + chr5_4:2026490-2026509 None:intergenic 60.0%
ATCATGTTGGGGGTGGGGGT+GGG + chr5_4:2027278-2027297 None:intergenic 60.0%
CACGATCATGTTGGGGGTGG+GGG + chr5_4:2027282-2027301 None:intergenic 60.0%
GGACACGATCATGTTGGGGG+TGG + chr5_4:2027285-2027304 None:intergenic 60.0%
! TGGGTTGGACCTAAACGGGG+CGG + chr5_4:2027509-2027528 None:intergenic 60.0%
TTAGCCCGCCAAAAACGGGG+TGG - chr5_4:2027532-2027551 Msa0829060:intron 60.0%
TAGCCCGCCAAAAACGGGGT+GGG - chr5_4:2027533-2027552 Msa0829060:intron 60.0%
TTGAGCCCACCCCCTCAAGT+TGG + chr5_4:2027569-2027588 None:intergenic 60.0%
CAACCCGCTAGTCCGCCTTT+AGG + chr5_4:2027609-2027628 None:intergenic 60.0%
!! CTAAAGGCGGACTAGCGGGT+TGG - chr5_4:2027607-2027626 Msa0829060:CDS 60.0%
AAACACAAGAAGGGGGGGGG+GGG - chr5_4:2028354-2028373 Msa0829060:intron 60.0%
CGGTCAATCCTGCTCCGTCT+TGG - chr5_4:2030131-2030150 Msa0829060:intron 60.0%
TGAGAGGTCCAAGACGGAGC+AGG + chr5_4:2030142-2030161 None:intergenic 60.0%
CTCCGTCTTGGACCTCTCAC+CGG - chr5_4:2030143-2030162 Msa0829060:intron 60.0%
AGCTTGGACTAAGGCGGCTC+AGG - chr5_4:2030800-2030819 Msa0829060:intron 60.0%
TTGGACTAAGGCGGCTCAGG+TGG - chr5_4:2030803-2030822 Msa0829060:intron 60.0%
GGCTCAGGTGGCTGAAGTAG+AGG - chr5_4:2030815-2030834 Msa0829060:intron 60.0%
AGTAGAGGCGAAGAAGGCCG+TGG - chr5_4:2030830-2030849 Msa0829060:intron 60.0%
! CGAAGAAGGCCGTGGCTCTA+AGG - chr5_4:2030838-2030857 Msa0829060:intron 60.0%
CTCAAGTCCGCGTACTGCCT+CGG + chr5_4:2031935-2031954 None:intergenic 60.0%
AAGGCTCCCATCCAAGCAGG+AGG + chr5_4:2032099-2032118 None:intergenic 60.0%
GCGATGCAGAGGGCTGGAGA+AGG - chr5_4:2024357-2024376 Msa0829060:intron 65.0%
CTCAAGTCCGCGTACCGCCT+CGG + chr5_4:2025806-2025825 None:intergenic 65.0%
CAGGCATGTTGCCTCCGGCT+TGG - chr5_4:2025956-2025975 Msa0829060:intron 65.0%
CGGTGAGAGGGATGGTGTCC+TGG + chr5_4:2026456-2026475 None:intergenic 65.0%
GGGCAGCGGCACGGTAATAG+CGG + chr5_4:2026476-2026495 None:intergenic 65.0%
ATGGTGGTTGGGCAGCGGCA+CGG + chr5_4:2026485-2026504 None:intergenic 65.0%
GATCATGTTGGGGGTGGGGG+TGG + chr5_4:2027279-2027298 None:intergenic 65.0%
TGGACCTAAACGGGGCGGGT+TGG + chr5_4:2027504-2027523 None:intergenic 65.0%
GGGTTGGACCTAAACGGGGC+GGG + chr5_4:2027508-2027527 None:intergenic 65.0%
AGCCCGCCAAAAACGGGGTG+GGG - chr5_4:2027534-2027553 Msa0829060:intron 65.0%
TAGTCCGCCTTTAGGCGGGG+CGG + chr5_4:2027601-2027620 None:intergenic 65.0%
CGCTAGTCCGCCTTTAGGCG+GGG + chr5_4:2027604-2027623 None:intergenic 65.0%
CCGCTAGTCCGCCTTTAGGC+GGG + chr5_4:2027605-2027624 None:intergenic 65.0%
!! CCCGCCTAAAGGCGGACTAG+CGG - chr5_4:2027602-2027621 Msa0829060:CDS 65.0%
CCCGCTAGTCCGCCTTTAGG+CGG + chr5_4:2027606-2027625 None:intergenic 65.0%
!! CCGCCTAAAGGCGGACTAGC+GGG - chr5_4:2027603-2027622 Msa0829060:CDS 65.0%
AACACAAGAAGGGGGGGGGG+GGG - chr5_4:2028355-2028374 Msa0829060:intron 65.0%
GAGAGAGGCTGAAGTGGCGG+AGG - chr5_4:2030749-2030768 Msa0829060:intron 65.0%
CGGGCATGTTGCCTCCTGCT+TGG - chr5_4:2032085-2032104 Msa0829060:CDS 65.0%
GAGGCCAACCCGCCCCGTTT+AGG - chr5_4:2027497-2027516 Msa0829060:CDS 70.0%
!!! CGCCCCACCCCGTTTTTGGC+GGG + chr5_4:2027539-2027558 None:intergenic 70.0%
!! CCGCCCCACCCCGTTTTTGG+CGG + chr5_4:2027540-2027559 None:intergenic 70.0%
CCGCCAAAAACGGGGTGGGG+CGG - chr5_4:2027537-2027556 Msa0829060:intron 70.0%
CGCCAAAAACGGGGTGGGGC+GGG - chr5_4:2027538-2027557 Msa0829060:intron 70.0%
GCCAAAAACGGGGTGGGGCG+GGG - chr5_4:2027539-2027558 Msa0829060:intron 70.0%
AAAAACGGGGTGGGGCGGGG+CGG - chr5_4:2027542-2027561 Msa0829060:intron 70.0%
GCGGGCCAACTTGAGGGGGT+GGG - chr5_4:2027561-2027580 Msa0829060:intron 70.0%
TCACACCCCGCCCCGCCTAA+AGG - chr5_4:2027591-2027610 Msa0829060:CDS 70.0%
AGTCCGCCTTTAGGCGGGGC+GGG + chr5_4:2027600-2027619 None:intergenic 70.0%
ACACAAGAAGGGGGGGGGGG+GGG - chr5_4:2028356-2028375 Msa0829060:intron 70.0%
! GCCCCGCCCCACCCCGTTTT+TGG + chr5_4:2027543-2027562 None:intergenic 75.0%
AAAACGGGGTGGGGCGGGGC+GGG - chr5_4:2027543-2027562 Msa0829060:intron 75.0%
GGCGGGGCGGGCCAACTTGA+GGG - chr5_4:2027555-2027574 Msa0829060:intron 75.0%
GCGGGGCGGGCCAACTTGAG+GGG - chr5_4:2027556-2027575 Msa0829060:intron 75.0%
CGGGGCGGGCCAACTTGAGG+GGG - chr5_4:2027557-2027576 Msa0829060:intron 75.0%
GGCGGGCCAACTTGAGGGGG+TGG - chr5_4:2027560-2027579 Msa0829060:intron 75.0%
CACCCCGCCCCGCCTAAAGG+CGG - chr5_4:2027594-2027613 Msa0829060:CDS 75.0%
GTCCGCCTTTAGGCGGGGCG+GGG + chr5_4:2027599-2027618 None:intergenic 75.0%
CACAAGAAGGGGGGGGGGGG+GGG - chr5_4:2028357-2028376 Msa0829060:intron 75.0%
ACAAGAAGGGGGGGGGGGGG+GGG - chr5_4:2028358-2028377 Msa0829060:intron 75.0%
! GGGCGGGGCGGGCCAACTTG+AGG - chr5_4:2027554-2027573 Msa0829060:intron 80.0%
! CAAGAAGGGGGGGGGGGGGG+GGG - chr5_4:2028359-2028378 Msa0829060:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2021088 2032223 2021088 ID=Msa0829060;Name=Msa0829060
chr5_4 mRNA 2021088 2032223 2021088 ID=Msa0829060-mRNA-1;Parent=Msa0829060;Name=Msa0829060-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.18|0.08|1|0.18|0.08|12|86|971
chr5_4 exon 2021088 2021683 2021088 ID=Msa0829060-mRNA-1:exon:637;Parent=Msa0829060-mRNA-1
chr5_4 exon 2022346 2022576 2022346 ID=Msa0829060-mRNA-1:exon:636;Parent=Msa0829060-mRNA-1
chr5_4 exon 2022595 2022822 2022595 ID=Msa0829060-mRNA-1:exon:635;Parent=Msa0829060-mRNA-1
chr5_4 exon 2022829 2023050 2022829 ID=Msa0829060-mRNA-1:exon:634;Parent=Msa0829060-mRNA-1
chr5_4 exon 2023063 2023304 2023063 ID=Msa0829060-mRNA-1:exon:633;Parent=Msa0829060-mRNA-1
chr5_4 exon 2027404 2027524 2027404 ID=Msa0829060-mRNA-1:exon:632;Parent=Msa0829060-mRNA-1
chr5_4 exon 2027567 2027812 2027567 ID=Msa0829060-mRNA-1:exon:631;Parent=Msa0829060-mRNA-1
chr5_4 exon 2028664 2028885 2028664 ID=Msa0829060-mRNA-1:exon:630;Parent=Msa0829060-mRNA-1
chr5_4 exon 2028895 2029140 2028895 ID=Msa0829060-mRNA-1:exon:629;Parent=Msa0829060-mRNA-1
chr5_4 exon 2029147 2029388 2029147 ID=Msa0829060-mRNA-1:exon:628;Parent=Msa0829060-mRNA-1
chr5_4 exon 2029434 2029636 2029434 ID=Msa0829060-mRNA-1:exon:627;Parent=Msa0829060-mRNA-1
chr5_4 exon 2032021 2032223 2032021 ID=Msa0829060-mRNA-1:exon:626;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2032021 2032223 2032021 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2029434 2029636 2029434 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2029147 2029388 2029147 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2028895 2029140 2028895 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2028664 2028885 2028664 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2027567 2027812 2027567 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2027404 2027524 2027404 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2023063 2023304 2023063 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2022829 2023050 2022829 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2022595 2022822 2022595 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2022346 2022576 2022346 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 CDS 2021174 2021683 2021174 ID=Msa0829060-mRNA-1:cds;Parent=Msa0829060-mRNA-1
chr5_4 three_prime_UTR 2021088 2021173 2021088 ID=Msa0829060-mRNA-1:three_prime_utr;Parent=Msa0829060-mRNA-1
Gene Sequence

>Msa0829060

ATGATAAATGGTGGCATGTTTCAAGAGATTGCTAAGATTAATGCCGAGGCGGTACGTGGACTTGAGCCTAAGATTAACATTTGGACTAATGGTGGTGATAATAGTGGGGGAATAACTGAAGGTGCCATGGGTATGAAAGAAGTTGCTGGTGTCTACAAGATGTTGCCACCTTTGTTTAAGACTGTCCATGAGCAAACAGGCATCTTCAATTTTCTTATTCTAGCTTTTCGAATTCAAACCAATATCAACATGTACCGGGTAGCAAAAGCATCAGAATACCTTGTGATAACTGGCGCCGGAATTGACGATGTAAAGCTTGAAAAGAAAGCATGGATTTTCCCGGGTCAATCCTGCACCGTCTTCGACCTCTCACCGGTGAATTACACCTTCGAAGTTCAAGCCATGAGTCCTCGTGTTGACGATTACGAAAGCCTCCTCAAATATGCCAAACTAATTTCCCCTCATGATAAACTCTCCAATCACGTTAATGAACTCGTTCAAGGAATCATCGAAGGCGAGACACGTGTCCTCGTTGCTTCAATGACAATGGAAGAGGTTTTCAGAGGAACAAAAGAATTTAAACAAGAAGTATTCGACAAAGTTCAACTTGAATTGAACCAATTCGGATTATGGATTTACAATGCCAATCAATTGGTGGATGTGCCTGGTCATGAATATTTCTCATATTTGGGACAAAAGACGCAGATGGAAGCAGCGAATCAAGCTAGGGTTGACGTGGCAGAAGCTAAGATGAAAGGTGAAATTGGTTCGAAATTGAGGGAAGGACAAACGATCCAGAACGCAGCGAAAATTGATGCAGAGACGAAGGTTATTGCGATGCAGAGGGCTGGAGAAGGTGAGAAACAGGGAATTAAAGTGAGGACTGAAGTGAAAAATCAAAGAGAGGCTGAAGTGGCTGAGGCTAATTCCGAGTTGGCTAAGAAGAAAGCTGCTTGGACAATGGCGGCTCAAGTGGCTGAGCTTGAGGCTGCTAAAGCCGTGGCTCTAAGGGAAGCTGAGTTGCAAGGTGAGGTTGAGAGGATGAATGCTTTGACCACTACTGAGAAGCTTAAAGCTGATTTCCTTAGCAAAGCTAGTGTTGAATATGACACTAAGGTACAAGAGGCTAACTGGGAATTATACAAGAAACAAAAAGAGGCAGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCGCAAAAAGCTTTGGCAGATTCCACATTTTATGCTCGCAAACAAGAAGCTGAAGCAGAGTTATACGCAAAGAAAAAAGAGGCAGAGGGGATTGTGACACTTGGGAATGCTCAAGGAGCATATGTAAGTACACTTCTCAATGCACTTGGGAACAACTACACAGCTATTGCTAAGATTAATGCCGAGGCGGTACGCGGACTTGAGCCTAAGATTAGTATTTGGACTAATGGTGGTGATAATAATGGGGGAATAACTGAAGGTGCCATGGGTATGAAAGAAGTTGCTGGTTTTCGAAATCCAAAATCATCAACAATGGGACTTTATCGTGTAGCAAAGGCATCAGAATACCTTGTGATAACAGGTATTCTAATCAAAGACATAAAACTCGCAAAGAAAGCATGGATTATTCCCGGTCAATCCTGCTCCGTCTTGGACCTCTCACCGGTAAACTACACCTTCGAAGTTCAAGCTATGAGTGCCGAGAAACTTCCTTTTGTTCTCCCCGCTGTCTTCACAATTGGTCCTCGTGAAAGCCTTCTCAAATACGCCAAACTTATTTCACCGCATGATAGACACTCCAATCATGTTAATGAACTTGTTCAAGGAATCATCGAAGGGGAGACACGTGTACTTGCTGCTTCCATGACGATGGAGGAGGTTTTCAGAGGAACAAAACAGTTTAAACAAGAAGTATTCGATAAAGTTCAACTTGAGTTGAATCAATTTGGATTATTGATTTACAATGCGAATCAACTGGTGGATGTGCCTGGTCATGAGTATTTCTCATATTTGGGACAAAAGACGCAGATGGAAGCAGCGAATCAAGCTAGGGTTGACGTGGCAGAAGCTAAGATGAAAGGTGAAATTGGTTCGAAATTGAGGCAAGGAAAAATGCTGCAGAATGCAGCGAAAATTGATGCAGAGACAAAAGTTATTTCGCTGCAGAGAACTGGAGAGGGTGACAAAGAGGGAATTAAAGTTTTTGAGAATCAGAGAGAGGCTGAAGTGGCGGAGGCTAATTCTGAGTTGGCTAAGAAGAAGGCAGCTTGGACTAAGGCGGCTCAGGTGGCTGAAGTAGAGGCGAAGAAGGCCGTGGCTCTAAGGGATGCTGAGTTACAAGGTGAAGTTGAGAGGATGAATGCTTTGACTACTACTGAGAAGCTTAAAGCTGAGTTCCTTAGCAAAGCCAGTGTTCAATATGAAACTAAGGTACAAGAAGCAAACTGGGAGCTGTACAAGAAACAGAAAGAGGCTGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCACAGAAAGCATTGGCAGATGCAACATTTTACGCTCGCAAACAAGCAGCTGAAGCAGAGCTATATGCAAAGAAAAAAGAGGCAGAGGGGATTGTGACACTTGGGAATGCTCAAGGAGCGTATGTAAGTACACTTCTCAATGTATTTGGAAACAACTACACTGCTGTAAGGGATTACTGGATGATAAATGGTGGCATGTTTCAAGAGATTGCTAAGATTAATGCCGAGGCAGTACGCGGACTTGAGCCTAAGATTAGTATTTGGACTAATGGTGGTGATAGTGGTGGTGAAAAAACTGAAGGTGCCATGGGTATGAAAGAAGTTGCTGGTGTCTACAAGATGCTGCCACCTTTGTTTAAGACTGTCCATGAGCAAACGGGCATGTTGCCTCCTGCTTGGATGGGAGCCTTATCTGAGAAAAGCCCTTAA
Protein sequence

>Msa0829060

MINGGMFQEIAKINAEAVRGLEPKINIWTNGGDNSGGITEGAMGMKEVAGVYKMLPPLFKTVHEQTGIFNFLILAFRIQTNINMYRVAKASEYLVITGAGIDDVKLEKKAWIFPGQSCTVFDLSPVNYTFEVQAMSPRVDDYESLLKYAKLISPHDKLSNHVNELVQGIIEGETRVLVASMTMEEVFRGTKEFKQEVFDKVQLELNQFGLWIYNANQLVDVPGHEYFSYLGQKTQMEAANQARVDVAEAKMKGEIGSKLREGQTIQNAAKIDAETKVIAMQRAGEGEKQGIKVRTEVKNQREAEVAEANSELAKKKAAWTMAAQVAELEAAKAVALREAELQGEVERMNALTTTEKLKADFLSKASVEYDTKVQEANWELYKKQKEAEAILYEKKAEAEAQKALADSTFYARKQEAEAELYAKKKEAEGIVTLGNAQGAYVSTLLNALGNNYTAIAKINAEAVRGLEPKISIWTNGGDNNGGITEGAMGMKEVAGFRNPKSSTMGLYRVAKASEYLVITGILIKDIKLAKKAWIIPGQSCSVLDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRESLLKYAKLISPHDRHSNHVNELVQGIIEGETRVLAASMTMEEVFRGTKQFKQEVFDKVQLELNQFGLLIYNANQLVDVPGHEYFSYLGQKTQMEAANQARVDVAEAKMKGEIGSKLRQGKMLQNAAKIDAETKVISLQRTGEGDKEGIKVFENQREAEVAEANSELAKKKAAWTKAAQVAEVEAKKAVALRDAELQGEVERMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKAEAEAQKALADATFYARKQAAEAELYAKKKEAEGIVTLGNAQGAYVSTLLNVFGNNYTAVRDYWMINGGMFQEIAKINAEAVRGLEPKISIWTNGGDSGGEKTEGAMGMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGALSEKSP*