AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087530 MtrunA17_Chr8g0337131 94.382 534 30 0 1 534 1 534 0.0 985
Msa1087530 MtrunA17_Chr8g0337201 93.446 534 35 0 1 534 1 534 0.0 974
Msa1087530 MtrunA17_Chr8g0386451 44.118 102 53 1 51 152 31 128 4.89e-19 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087530 AT2G37920.1 80.282 142 28 0 43 184 42 183 1.96e-81 254
Msa1087530 AT2G07750.1 47.170 106 43 3 51 149 76 175 2.17e-19 92.4
Msa1087530 AT1G63250.1 47.000 100 52 1 51 149 26 125 9.42e-19 90.5

Find 178 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTCTCCTTTGAATTA+TGG 0.136407 7_3:+243601 Msa1087530:CDS
TAAGAGTTGCTTGGCCTTCT+TGG 0.154488 7_3:-243188 None:intergenic
ATTCTTCTTCTTTGAATTCT+AGG 0.161315 7_3:+244064 Msa1087530:CDS
GAAGGCCAAGCAACTCTTAA+AGG 0.203226 7_3:+243192 Msa1087530:CDS
CTTCTTCTCCTTTGAATTAT+GGG 0.214225 7_3:+243602 Msa1087530:CDS
TTTATGTCAAAGGGTGTTAA+TGG 0.247197 7_3:+244336 Msa1087530:CDS
AGCCTGGTGGGTTTGACCTT+TGG 0.261376 7_3:+243380 Msa1087530:CDS
TGATGAGCAGCTCAAGGTTT+TGG 0.278740 7_3:+243342 Msa1087530:CDS
TTTATTCCAAAGGGTGTAGA+TGG 0.302620 7_3:+244141 Msa1087530:CDS
ATACTATGAACAACCCCTTT+AGG 0.307915 7_3:-243466 None:intergenic
AGATTCCGAAGTTTATGATA+TGG 0.326680 7_3:+244491 Msa1087530:CDS
GATGGCAATTTCGGGAATAA+AGG 0.329120 7_3:+244219 Msa1087530:CDS
GAAGAATGATCTTCATTATC+TGG 0.334414 7_3:-244048 None:intergenic
TGGAACTGATCGACATCTTC+TGG 0.338243 7_3:-243919 None:intergenic
ACGGGAGTAGGTATTCATTA+GGG 0.349897 7_3:+244013 Msa1087530:CDS
AAGGGTGTTAATGGGTCTAA+TGG 0.352119 7_3:+244345 Msa1087530:CDS
AACGGGAGTAGGTATTCATT+AGG 0.357075 7_3:+244012 Msa1087530:CDS
CTGCTAGGTACTTTCCTAAA+GGG 0.358672 7_3:+243452 Msa1087530:CDS
TGTCTGAGTTGGAGAGGCCT+TGG 0.363814 7_3:+243278 Msa1087530:CDS
CGTTCTTCTCATTTGAGTAC+TGG 0.365356 7_3:+243835 Msa1087530:CDS
TCCATTGCAGGCAGGAGATA+TGG 0.367211 7_3:+244417 Msa1087530:CDS
CTAGCAGAAGGCAACTCATC+AGG 0.379311 7_3:-243436 None:intergenic
GTCTGAGTTGGAGAGGCCTT+GGG 0.382992 7_3:+243279 Msa1087530:CDS
TCACTAGTAACCTTCATATA+AGG 0.389583 7_3:-243493 None:intergenic
GAGGAAGAGGGCTGAGCTTA+AGG 0.397779 7_3:+243249 Msa1087530:CDS
AGAGGGAGTAATTCCATTGC+AGG 0.400461 7_3:+244405 Msa1087530:CDS
GATTCCGAAGTTTATGATAT+GGG 0.401573 7_3:+244492 Msa1087530:CDS
GATGTTGTTCGGTCCCTTGA+TGG 0.402228 7_3:+243808 Msa1087530:CDS
CCAACGATGGTGATGCTGTT+AGG 0.403084 7_3:+244262 Msa1087530:CDS
ATGGCAATTTCGGGAATAAA+GGG 0.411540 7_3:+244220 Msa1087530:CDS
GCTTTGATAGAGAACAACTT+AGG 0.416712 7_3:-243319 None:intergenic
GTTCTTCTCATTTGAGTACT+AGG 0.424850 7_3:+243953 Msa1087530:CDS
TTGGAAGATGGTGGCGGTGA+AGG 0.425938 7_3:+243541 Msa1087530:CDS
TGCCACTTGGACACCCCACC+TGG 0.430845 7_3:-243148 None:intergenic
CTTAAAGGCGCGACTGTGCC+GGG 0.433268 7_3:+243207 Msa1087530:CDS
GGCAGTCGATTGCAAAAGAA+TGG 0.437012 7_3:+243643 Msa1087530:CDS
GCTGATAGGTTTCAGAAGCC+TGG 0.437802 7_3:+243364 Msa1087530:CDS
TGATGACTTGTTGGTGGAAC+CGG 0.438809 7_3:+243513 Msa1087530:CDS
TTATGTCAAAGGGTGTTAAT+GGG 0.439277 7_3:+244337 Msa1087530:CDS
GTTGGTGGAACCGGATGTTT+TGG 0.441447 7_3:+243522 Msa1087530:CDS
ACCCCACCTGGATACGTCCT+TGG 0.442899 7_3:-243136 None:intergenic
GTTGGAGAGGCCTTGGGAGG+TGG 0.450649 7_3:+243285 Msa1087530:CDS
TCCTTGGCCCACCACCCATT+CGG 0.453379 7_3:-243120 None:intergenic
TCCGACCCATCTACACCCTT+TGG 0.454564 7_3:-244147 None:intergenic
CTTTGATAGAGAACAACTTA+GGG 0.454597 7_3:-243318 None:intergenic
AGGGTGTTAATGGGTCTAAT+GGG 0.454713 7_3:+244346 Msa1087530:CDS
TCTTAAAGGCGCGACTGTGC+CGG 0.457990 7_3:+243206 Msa1087530:CDS
ATGGTGGCGGTGAAGGGTAT+TGG 0.462116 7_3:+243548 Msa1087530:CDS
TCTGCTAGGTACTTTCCTAA+AGG 0.464717 7_3:+243451 Msa1087530:CDS
GGTGGGCCAAGGACGTATCC+AGG 0.467611 7_3:+243130 Msa1087530:CDS
GCTGTTAGGTCTAATGAATC+TGG 0.468651 7_3:+244276 Msa1087530:CDS
TCTTTGAATTCTAGGAGGAA+TGG 0.471020 7_3:+244072 Msa1087530:CDS
TTTCATATATTTGCCGCTCC+CGG 0.471772 7_3:-243225 None:intergenic
TAGAAAGAGGTTTATGTCAA+AGG 0.472300 7_3:+244326 Msa1087530:CDS
TCTCCTTCACATGCGAGGAA+TGG 0.479275 7_3:+244186 Msa1087530:CDS
CGTTCAACTGTGATCCGAAT+GGG 0.479445 7_3:+243106 Msa1087530:CDS
TTCTCCTTTGAATTATGGGA+GGG 0.482281 7_3:+243606 Msa1087530:CDS
GGAAGGAAGTTTATTCCAAA+GGG 0.482831 7_3:+244132 Msa1087530:CDS
TATGCAGGAAGAGATGCTTC+TGG 0.484105 7_3:+244372 Msa1087530:CDS
TCCGAATGGGTGGTGGGCCA+AGG 0.486021 7_3:+243119 Msa1087530:CDS
TCGCGCCTTTAAGAGTTGCT+TGG 0.492554 7_3:-243197 None:intergenic
CATACGCTTCCATTGCCACT+TGG 0.496238 7_3:-243161 None:intergenic
GGCTTCTCAACCACCTCCCA+AGG 0.496571 7_3:-243295 None:intergenic
GTTCTTCTCATTTGAGTACT+GGG 0.500842 7_3:+243836 Msa1087530:CDS
AGGCGCGACTGTGCCGGGAG+CGG 0.501425 7_3:+243212 Msa1087530:CDS
GACCTTTGGACTGAAAATGA+TGG 0.501676 7_3:+243394 Msa1087530:CDS
TGGAAGATGGTGGCGGTGAA+GGG 0.503158 7_3:+243542 Msa1087530:CDS
AGAAAGAGGTTTATGTCAAA+GGG 0.506974 7_3:+244327 Msa1087530:CDS
TAGCAGAAGGCAACTCATCA+GGG 0.507988 7_3:-243435 None:intergenic
TAGTATCAAGCCTTATATGA+AGG 0.508811 7_3:+243483 Msa1087530:CDS
CTTCTCCTTTGAATTATGGG+AGG 0.510533 7_3:+243605 Msa1087530:CDS
GGCCAAGGACGTATCCAGGT+GGG 0.513034 7_3:+243134 Msa1087530:CDS
GGTTACTAGTGATGACTTGT+TGG 0.513129 7_3:+243504 Msa1087530:CDS
GATATGGGTTTACAACAAGA+TGG 0.513338 7_3:+244507 Msa1087530:CDS
GAGAAGAACGCTCCCCATCA+TGG 0.513359 7_3:-243705 None:intergenic
GGATTCAGAAAGAATGAAAG+TGG 0.514070 7_3:+243883 Msa1087530:CDS
GAGAAGAACGCTCCCCATCA+TGG 0.514183 7_3:-243939 None:intergenic
TCGTTCAACTGTGATCCGAA+TGG 0.514392 7_3:+243105 Msa1087530:CDS
GGGTCTAATGGGATGTATGC+AGG 0.514728 7_3:+244357 Msa1087530:CDS
TCCATATCTCCTGCCTGCAA+TGG 0.515308 7_3:-244418 None:intergenic
GTGGCAATGGAAGCGTATGC+AGG 0.517535 7_3:+243165 Msa1087530:CDS
TGCTAGGTACTTTCCTAAAG+GGG 0.520755 7_3:+243453 Msa1087530:CDS
AGAATGAGGAAGCACGGGAA+TGG 0.520786 7_3:+244111 Msa1087530:CDS
ATTCATTAGGGGATGTTGAT+CGG 0.523054 7_3:+244025 Msa1087530:CDS
GTGGGGTGTCCAAGTGGCAA+TGG 0.524560 7_3:+243152 Msa1087530:CDS
ATGTTGATCGGTCCCATGAT+GGG 0.525367 7_3:+243692 Msa1087530:CDS
ATTTGTCAGAGGATGTTGTT+CGG 0.528186 7_3:+243797 Msa1087530:CDS
CTGATGAGTTGCCTTCTGCT+AGG 0.530521 7_3:+243437 Msa1087530:CDS
ATGTCGATCAGTTCCATGAT+GGG 0.532019 7_3:+243926 Msa1087530:CDS
AATGTTGATCGGTCCCATGA+TGG 0.535818 7_3:+243691 Msa1087530:CDS
GCAGTCGATTGCAAAAGAAT+GGG 0.537992 7_3:+243644 Msa1087530:CDS
AGAAGAACGCTCCCCATCAT+GGG 0.538589 7_3:-243704 None:intergenic
GAGAAGAACGCTCTCCATCA+AGG 0.539033 7_3:-243822 None:intergenic
CCACCATCTTCCAAAACATC+CGG 0.541453 7_3:-243532 None:intergenic
GATGTCGATCAGTTCCATGA+TGG 0.542056 7_3:+243925 Msa1087530:CDS
GATAGGTTTCAGAAGCCTGG+TGG 0.543185 7_3:+243367 Msa1087530:CDS
TGAGGAAGCACGGGAATGGA+AGG 0.547129 7_3:+244115 Msa1087530:CDS
TAAGGCTGCTGTGTCTGAGT+TGG 0.547223 7_3:+243267 Msa1087530:CDS
CGATTGCAAAAGAATGGGAA+TGG 0.549214 7_3:+243649 Msa1087530:CDS
ATAGGTTTCAGAAGCCTGGT+GGG 0.552605 7_3:+243368 Msa1087530:CDS
GGGAGGGATGAAGTGAATGT+TGG 0.555148 7_3:+243622 Msa1087530:CDS
GGAGTAATTCCATTGCAGGC+AGG 0.555506 7_3:+244409 Msa1087530:CDS
GCCAAGGACGTATCCAGGTG+GGG 0.557287 7_3:+243135 Msa1087530:CDS
ACTGTGATCCGAATGGGTGG+TGG 0.557980 7_3:+243112 Msa1087530:CDS
CGTGGTGGATTGAGAAAGAA+CGG 0.558365 7_3:+243994 Msa1087530:CDS
CAGTTGTTGTAGCACATTGG+CGG 0.559325 7_3:-242987 None:intergenic
TGGAAGGAAGTTTATTCCAA+AGG 0.560885 7_3:+244131 Msa1087530:CDS
TGCAAAAGAATGGGAATGGA+AGG 0.563734 7_3:+243653 Msa1087530:CDS
AAATATATGAAATGAGGAAG+AGG 0.565243 7_3:+243236 Msa1087530:CDS
GTCCAAAGGTCAAACCCACC+AGG 0.565839 7_3:-243382 None:intergenic
CTTCTCATTTGAGTGCTGAG+AGG 0.569280 7_3:+243722 Msa1087530:CDS
ATGCTAGAATGAGGAAGCAC+GGG 0.570036 7_3:+244106 Msa1087530:CDS
CTGCTGTGTCTGAGTTGGAG+AGG 0.570591 7_3:+243272 Msa1087530:CDS
GCTCCATTCCTCGCATGTGA+AGG 0.570651 7_3:-244189 None:intergenic
TAAACCCATATCATAAACTT+CGG 0.571619 7_3:-244496 None:intergenic
TCCAAAGGGTGTAGATGGGT+CGG 0.572590 7_3:+244146 Msa1087530:CDS
GATTGAGAAAGAACGGGAGT+AGG 0.573933 7_3:+244001 Msa1087530:CDS
CTTCTTCTTTGAATTCTAGG+AGG 0.575242 7_3:+244067 Msa1087530:CDS
GAATAAAGGGAGTGCAAGGA+GGG 0.580424 7_3:+244233 Msa1087530:CDS
GGGCCAAGGACGTATCCAGG+TGG 0.582577 7_3:+243133 Msa1087530:CDS
CAAATATTGATGCTAGAATG+AGG 0.585058 7_3:+244097 Msa1087530:CDS
TTATTCCAAAGGGTGTAGAT+GGG 0.587028 7_3:+244142 Msa1087530:CDS
TGATATTAGATCGAGGAGGA+AGG 0.587125 7_3:+244299 Msa1087530:CDS
CAAAGCTGATGAGCAGCTCA+AGG 0.588229 7_3:+243336 Msa1087530:CDS
GTTCTTCTCCTTCACATGCG+AGG 0.590332 7_3:+244181 Msa1087530:CDS
GAAGCGTATGCAGGCCAAGA+AGG 0.590653 7_3:+243174 Msa1087530:CDS
GATGTTGATGATTGTGAGGG+TGG 0.591087 7_3:+243577 Msa1087530:CDS
TGACAGTTGTTGTAGCACAT+TGG 0.594761 7_3:-242990 None:intergenic
GTGGTGGATTGAGAAAGAAC+GGG 0.597332 7_3:+243995 Msa1087530:CDS
GATGCTAGAATGAGGAAGCA+CGG 0.598567 7_3:+244105 Msa1087530:CDS
TACTAGTGATGACTTGTTGG+TGG 0.599018 7_3:+243507 Msa1087530:CDS
CCTAACAGCATCACCATCGT+TGG 0.599436 7_3:-244262 None:intergenic
TCATCCCTCCCATAATTCAA+AGG 0.599683 7_3:-243610 None:intergenic
AAAAGAACGGGAATGGAAGG+AGG 0.599763 7_3:+243773 Msa1087530:CDS
AGAAGAACGCTCTCCATCAA+GGG 0.602854 7_3:-243821 None:intergenic
GGAGGAAGGACAGTAGAAAG+AGG 0.603188 7_3:+244313 Msa1087530:CDS
AAGACCGAGTTGAATGTTCG+TGG 0.604006 7_3:+243976 Msa1087530:CDS
TTCAAACAATGCTTCACGAA+GGG 0.605338 7_3:+244458 Msa1087530:CDS
TGGAAGGAGGTATTTGTCAG+AGG 0.606269 7_3:+243786 Msa1087530:CDS
TGAGTTGGAGAGGCCTTGGG+AGG 0.608070 7_3:+243282 Msa1087530:CDS
CGGTGAAGGGTATTGGTCAG+AGG 0.608666 7_3:+243555 Msa1087530:CDS
AGGAGTGAATTGAATGTTCG+TGG 0.610536 7_3:+243742 Msa1087530:CDS
TCAGAAAGAATGAAAGTGGG+AGG 0.610800 7_3:+243887 Msa1087530:CDS
AATATATGAAATGAGGAAGA+GGG 0.611111 7_3:+243237 Msa1087530:CDS
TTAGGAAAGTACCTAGCAGA+AGG 0.611161 7_3:-243448 None:intergenic
AGCGGCAAATATATGAAATG+AGG 0.611343 7_3:+243230 Msa1087530:CDS
CTGTGATCCGAATGGGTGGT+GGG 0.612200 7_3:+243113 Msa1087530:CDS
AGAGGATGTTGATGATTGTG+AGG 0.615555 7_3:+243573 Msa1087530:CDS
TGTTGATCGGTCCCATGATG+GGG 0.620284 7_3:+243693 Msa1087530:CDS
AGCAACCTGACTCTACAAGC+TGG 0.620354 7_3:+244553 Msa1087530:CDS
ATCACAGTTGAACGAGAAGG+TGG 0.621729 7_3:-243097 None:intergenic
ATTTGTCAGATAATGTTGAT+CGG 0.624654 7_3:+243680 Msa1087530:CDS
GGAATAAAGGGAGTGCAAGG+AGG 0.625678 7_3:+244232 Msa1087530:CDS
CGGATCACAGTTGAACGAGA+AGG 0.627012 7_3:-243100 None:intergenic
AAAAGAATGGGAATGGAAGG+AGG 0.632027 7_3:+243656 Msa1087530:CDS
ATCCAGGTGGGGTGTCCAAG+TGG 0.634467 7_3:+243146 Msa1087530:CDS
TTGATAGAGAACAACTTAGG+GGG 0.634929 7_3:-243316 None:intergenic
TCGGGAATAAAGGGAGTGCA+AGG 0.635659 7_3:+244229 Msa1087530:CDS
ATGGAATTACTCCCTCTCTG+TGG 0.636479 7_3:-244399 None:intergenic
GATTCAGAAAGAATGAAAGT+GGG 0.640798 7_3:+243884 Msa1087530:CDS
AGAAGTGAACTGAATGTTCG+TGG 0.644976 7_3:+243859 Msa1087530:CDS
ACCGAGTTGAATGTTCGTGG+TGG 0.650259 7_3:+243979 Msa1087530:CDS
CGGGAGTAGGTATTCATTAG+GGG 0.655665 7_3:+244014 Msa1087530:CDS
TGTCGATCAGTTCCATGATG+GGG 0.663175 7_3:+243927 Msa1087530:CDS
TCAACTGTGATCCGAATGGG+TGG 0.663322 7_3:+243109 Msa1087530:CDS
CTTCTGGCAAACCACAGAGA+GGG 0.664375 7_3:+244388 Msa1087530:CDS
AGCAGAAGGCAACTCATCAG+GGG 0.664647 7_3:-243434 None:intergenic
TTTGATAGAGAACAACTTAG+GGG 0.666749 7_3:-243317 None:intergenic
TCCACCACGAACATTCAACT+CGG 0.667563 7_3:-243980 None:intergenic
CTTCAAACAATGCTTCACGA+AGG 0.679253 7_3:+244457 Msa1087530:CDS
GAGGATGTTGATGATTGTGA+GGG 0.685932 7_3:+243574 Msa1087530:CDS
AGTGAATTGAATGTTCGTGG+TGG 0.686338 7_3:+243745 Msa1087530:CDS
GATATGGAAAATATACTCAG+AGG 0.693542 7_3:+244433 Msa1087530:CDS
GCTTCTGGCAAACCACAGAG+AGG 0.700235 7_3:+244387 Msa1087530:CDS
AATCTGGTGATATTAGATCG+AGG 0.719396 7_3:+244292 Msa1087530:CDS
AGTGAACTGAATGTTCGTGG+TGG 0.720003 7_3:+243862 Msa1087530:CDS
TCAGGGGTTTGAAACAACTG+TGG 0.722897 7_3:-243418 None:intergenic
CTGGTGATATTAGATCGAGG+AGG 0.764359 7_3:+244295 Msa1087530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTTTGTCAAGTTTTGAA+TGG + chr7_3:243026-243045 Msa1087530:CDS 25.0%
! AAATATATGAAATGAGGAAG+AGG + chr7_3:243236-243255 Msa1087530:CDS 25.0%
! AATATATGAAATGAGGAAGA+GGG + chr7_3:243237-243256 Msa1087530:CDS 25.0%
! ATTTGTCAGATAATGTTGAT+CGG + chr7_3:243680-243699 Msa1087530:CDS 25.0%
! ATTCTTCTTCTTTGAATTCT+AGG + chr7_3:244064-244083 Msa1087530:CDS 25.0%
! TAAACCCATATCATAAACTT+CGG - chr7_3:244499-244518 None:intergenic 25.0%
!!! AATCTTTGTCAAGTTTTGAA+TGG + chr7_3:243026-243045 Msa1087530:CDS 25.0%
! AAATATATGAAATGAGGAAG+AGG + chr7_3:243236-243255 Msa1087530:CDS 25.0%
! AATATATGAAATGAGGAAGA+GGG + chr7_3:243237-243256 Msa1087530:CDS 25.0%
! ATTTGTCAGATAATGTTGAT+CGG + chr7_3:243680-243699 Msa1087530:CDS 25.0%
! ATTCTTCTTCTTTGAATTCT+AGG + chr7_3:244064-244083 Msa1087530:CDS 25.0%
! TAAACCCATATCATAAACTT+CGG - chr7_3:244499-244518 None:intergenic 25.0%
TTTGATAGAGAACAACTTAG+GGG - chr7_3:243320-243339 None:intergenic 30.0%
CTTTGATAGAGAACAACTTA+GGG - chr7_3:243321-243340 None:intergenic 30.0%
! TAGTATCAAGCCTTATATGA+AGG + chr7_3:243483-243502 Msa1087530:CDS 30.0%
TCACTAGTAACCTTCATATA+AGG - chr7_3:243496-243515 None:intergenic 30.0%
TCTTCTTCTCCTTTGAATTA+TGG + chr7_3:243601-243620 Msa1087530:CDS 30.0%
CTTCTTCTCCTTTGAATTAT+GGG + chr7_3:243602-243621 Msa1087530:CDS 30.0%
GATTCAGAAAGAATGAAAGT+GGG + chr7_3:243884-243903 Msa1087530:CDS 30.0%
GAAGAATGATCTTCATTATC+TGG - chr7_3:244051-244070 None:intergenic 30.0%
CAAATATTGATGCTAGAATG+AGG + chr7_3:244097-244116 Msa1087530:CDS 30.0%
TAGAAAGAGGTTTATGTCAA+AGG + chr7_3:244326-244345 Msa1087530:CDS 30.0%
AGAAAGAGGTTTATGTCAAA+GGG + chr7_3:244327-244346 Msa1087530:CDS 30.0%
!! TTTATGTCAAAGGGTGTTAA+TGG + chr7_3:244336-244355 Msa1087530:CDS 30.0%
!! TTATGTCAAAGGGTGTTAAT+GGG + chr7_3:244337-244356 Msa1087530:CDS 30.0%
GATATGGAAAATATACTCAG+AGG + chr7_3:244433-244452 Msa1087530:CDS 30.0%
AGATTCCGAAGTTTATGATA+TGG + chr7_3:244491-244510 Msa1087530:CDS 30.0%
GATTCCGAAGTTTATGATAT+GGG + chr7_3:244492-244511 Msa1087530:CDS 30.0%
TTTGATAGAGAACAACTTAG+GGG - chr7_3:243320-243339 None:intergenic 30.0%
CTTTGATAGAGAACAACTTA+GGG - chr7_3:243321-243340 None:intergenic 30.0%
! TAGTATCAAGCCTTATATGA+AGG + chr7_3:243483-243502 Msa1087530:CDS 30.0%
TCACTAGTAACCTTCATATA+AGG - chr7_3:243496-243515 None:intergenic 30.0%
TCTTCTTCTCCTTTGAATTA+TGG + chr7_3:243601-243620 Msa1087530:CDS 30.0%
CTTCTTCTCCTTTGAATTAT+GGG + chr7_3:243602-243621 Msa1087530:CDS 30.0%
GATTCAGAAAGAATGAAAGT+GGG + chr7_3:243884-243903 Msa1087530:CDS 30.0%
GAAGAATGATCTTCATTATC+TGG - chr7_3:244051-244070 None:intergenic 30.0%
CAAATATTGATGCTAGAATG+AGG + chr7_3:244097-244116 Msa1087530:CDS 30.0%
TAGAAAGAGGTTTATGTCAA+AGG + chr7_3:244326-244345 Msa1087530:CDS 30.0%
AGAAAGAGGTTTATGTCAAA+GGG + chr7_3:244327-244346 Msa1087530:CDS 30.0%
!! TTTATGTCAAAGGGTGTTAA+TGG + chr7_3:244336-244355 Msa1087530:CDS 30.0%
!! TTATGTCAAAGGGTGTTAAT+GGG + chr7_3:244337-244356 Msa1087530:CDS 30.0%
GATATGGAAAATATACTCAG+AGG + chr7_3:244433-244452 Msa1087530:CDS 30.0%
AGATTCCGAAGTTTATGATA+TGG + chr7_3:244491-244510 Msa1087530:CDS 30.0%
GATTCCGAAGTTTATGATAT+GGG + chr7_3:244492-244511 Msa1087530:CDS 30.0%
AGCGGCAAATATATGAAATG+AGG + chr7_3:243230-243249 Msa1087530:CDS 35.0%
TTGATAGAGAACAACTTAGG+GGG - chr7_3:243319-243338 None:intergenic 35.0%
GCTTTGATAGAGAACAACTT+AGG - chr7_3:243322-243341 None:intergenic 35.0%
ATACTATGAACAACCCCTTT+AGG - chr7_3:243469-243488 None:intergenic 35.0%
TTCTCCTTTGAATTATGGGA+GGG + chr7_3:243606-243625 Msa1087530:CDS 35.0%
ATTTGTCAGAGGATGTTGTT+CGG + chr7_3:243797-243816 Msa1087530:CDS 35.0%
GTTCTTCTCATTTGAGTACT+GGG + chr7_3:243836-243855 Msa1087530:CDS 35.0%
GGATTCAGAAAGAATGAAAG+TGG + chr7_3:243883-243902 Msa1087530:CDS 35.0%
GTTCTTCTCATTTGAGTACT+AGG + chr7_3:243836-243855 Msa1087530:CDS 35.0%
ATTCATTAGGGGATGTTGAT+CGG + chr7_3:244025-244044 Msa1087530:CDS 35.0%
CTTCTTCTTTGAATTCTAGG+AGG + chr7_3:244067-244086 Msa1087530:CDS 35.0%
! TCTTTGAATTCTAGGAGGAA+TGG + chr7_3:244072-244091 Msa1087530:CDS 35.0%
TGGAAGGAAGTTTATTCCAA+AGG + chr7_3:244131-244150 Msa1087530:CDS 35.0%
GGAAGGAAGTTTATTCCAAA+GGG + chr7_3:244132-244151 Msa1087530:CDS 35.0%
! TTTATTCCAAAGGGTGTAGA+TGG + chr7_3:244141-244160 Msa1087530:CDS 35.0%
! TTATTCCAAAGGGTGTAGAT+GGG + chr7_3:244142-244161 Msa1087530:CDS 35.0%
ATGGCAATTTCGGGAATAAA+GGG + chr7_3:244220-244239 Msa1087530:CDS 35.0%
AATCTGGTGATATTAGATCG+AGG + chr7_3:244292-244311 Msa1087530:CDS 35.0%
TTCAAACAATGCTTCACGAA+GGG + chr7_3:244458-244477 Msa1087530:CDS 35.0%
GATATGGGTTTACAACAAGA+TGG + chr7_3:244507-244526 Msa1087530:CDS 35.0%
AGCGGCAAATATATGAAATG+AGG + chr7_3:243230-243249 Msa1087530:CDS 35.0%
TTGATAGAGAACAACTTAGG+GGG - chr7_3:243319-243338 None:intergenic 35.0%
GCTTTGATAGAGAACAACTT+AGG - chr7_3:243322-243341 None:intergenic 35.0%
ATACTATGAACAACCCCTTT+AGG - chr7_3:243469-243488 None:intergenic 35.0%
TTCTCCTTTGAATTATGGGA+GGG + chr7_3:243606-243625 Msa1087530:CDS 35.0%
ATTTGTCAGAGGATGTTGTT+CGG + chr7_3:243797-243816 Msa1087530:CDS 35.0%
GTTCTTCTCATTTGAGTACT+GGG + chr7_3:243836-243855 Msa1087530:CDS 35.0%
GGATTCAGAAAGAATGAAAG+TGG + chr7_3:243883-243902 Msa1087530:CDS 35.0%
GTTCTTCTCATTTGAGTACT+AGG + chr7_3:243836-243855 Msa1087530:CDS 35.0%
ATTCATTAGGGGATGTTGAT+CGG + chr7_3:244025-244044 Msa1087530:CDS 35.0%
CTTCTTCTTTGAATTCTAGG+AGG + chr7_3:244067-244086 Msa1087530:CDS 35.0%
! TCTTTGAATTCTAGGAGGAA+TGG + chr7_3:244072-244091 Msa1087530:CDS 35.0%
TGGAAGGAAGTTTATTCCAA+AGG + chr7_3:244131-244150 Msa1087530:CDS 35.0%
GGAAGGAAGTTTATTCCAAA+GGG + chr7_3:244132-244151 Msa1087530:CDS 35.0%
! TTTATTCCAAAGGGTGTAGA+TGG + chr7_3:244141-244160 Msa1087530:CDS 35.0%
! TTATTCCAAAGGGTGTAGAT+GGG + chr7_3:244142-244161 Msa1087530:CDS 35.0%
ATGGCAATTTCGGGAATAAA+GGG + chr7_3:244220-244239 Msa1087530:CDS 35.0%
AATCTGGTGATATTAGATCG+AGG + chr7_3:244292-244311 Msa1087530:CDS 35.0%
TTCAAACAATGCTTCACGAA+GGG + chr7_3:244458-244477 Msa1087530:CDS 35.0%
GATATGGGTTTACAACAAGA+TGG + chr7_3:244507-244526 Msa1087530:CDS 35.0%
TGACAGTTGTTGTAGCACAT+TGG - chr7_3:242993-243012 None:intergenic 40.0%
! GTTTTGCTACAGTCACTGTA+AGG - chr7_3:243078-243097 None:intergenic 40.0%
TTTCATATATTTGCCGCTCC+CGG - chr7_3:243228-243247 None:intergenic 40.0%
GACCTTTGGACTGAAAATGA+TGG + chr7_3:243394-243413 Msa1087530:CDS 40.0%
! GTCCATCATTTTCAGTCCAA+AGG - chr7_3:243399-243418 None:intergenic 40.0%
!! TTAGGAAAGTACCTAGCAGA+AGG - chr7_3:243451-243470 None:intergenic 40.0%
TCTGCTAGGTACTTTCCTAA+AGG + chr7_3:243451-243470 Msa1087530:CDS 40.0%
CTGCTAGGTACTTTCCTAAA+GGG + chr7_3:243452-243471 Msa1087530:CDS 40.0%
TGCTAGGTACTTTCCTAAAG+GGG + chr7_3:243453-243472 Msa1087530:CDS 40.0%
! GGTTACTAGTGATGACTTGT+TGG + chr7_3:243504-243523 Msa1087530:CDS 40.0%
!! TACTAGTGATGACTTGTTGG+TGG + chr7_3:243507-243526 Msa1087530:CDS 40.0%
!! AGAGGATGTTGATGATTGTG+AGG + chr7_3:243573-243592 Msa1087530:CDS 40.0%
!! GAGGATGTTGATGATTGTGA+GGG + chr7_3:243574-243593 Msa1087530:CDS 40.0%
CTTCTCCTTTGAATTATGGG+AGG + chr7_3:243605-243624 Msa1087530:CDS 40.0%
TCATCCCTCCCATAATTCAA+AGG - chr7_3:243613-243632 None:intergenic 40.0%
GCAGTCGATTGCAAAAGAAT+GGG + chr7_3:243644-243663 Msa1087530:CDS 40.0%
CGATTGCAAAAGAATGGGAA+TGG + chr7_3:243649-243668 Msa1087530:CDS 40.0%
TGCAAAAGAATGGGAATGGA+AGG + chr7_3:243653-243672 Msa1087530:CDS 40.0%
AAAAGAATGGGAATGGAAGG+AGG + chr7_3:243656-243675 Msa1087530:CDS 40.0%
AGGAGTGAATTGAATGTTCG+TGG + chr7_3:243742-243761 Msa1087530:CDS 40.0%
AGTGAATTGAATGTTCGTGG+TGG + chr7_3:243745-243764 Msa1087530:CDS 40.0%
!! CGTGGTGGATTGAAAAAGAA+CGG + chr7_3:243760-243779 Msa1087530:CDS 40.0%
!! GTGGTGGATTGAAAAAGAAC+GGG + chr7_3:243761-243780 Msa1087530:CDS 40.0%
GGATTGAAAAAGAACGGGAA+TGG + chr7_3:243766-243785 Msa1087530:CDS 40.0%
TGAAAAAGAACGGGAATGGA+AGG + chr7_3:243770-243789 Msa1087530:CDS 40.0%
CGTTCTTCTCATTTGAGTAC+TGG + chr7_3:243835-243854 Msa1087530:CDS 40.0%
AGAAGTGAACTGAATGTTCG+TGG + chr7_3:243859-243878 Msa1087530:CDS 40.0%
TCAGAAAGAATGAAAGTGGG+AGG + chr7_3:243887-243906 Msa1087530:CDS 40.0%
ATGTCGATCAGTTCCATGAT+GGG + chr7_3:243926-243945 Msa1087530:CDS 40.0%
AACGGGAGTAGGTATTCATT+AGG + chr7_3:244012-244031 Msa1087530:CDS 40.0%
ACGGGAGTAGGTATTCATTA+GGG + chr7_3:244013-244032 Msa1087530:CDS 40.0%
!! GCGAGTTTTGATGGCAATTT+CGG + chr7_3:244210-244229 Msa1087530:CDS 40.0%
!! CGAGTTTTGATGGCAATTTC+GGG + chr7_3:244211-244230 Msa1087530:CDS 40.0%
GATGGCAATTTCGGGAATAA+AGG + chr7_3:244219-244238 Msa1087530:CDS 40.0%
GCTGTTAGGTCTAATGAATC+TGG + chr7_3:244276-244295 Msa1087530:CDS 40.0%
TGATATTAGATCGAGGAGGA+AGG + chr7_3:244299-244318 Msa1087530:CDS 40.0%
!! AAGGGTGTTAATGGGTCTAA+TGG + chr7_3:244345-244364 Msa1087530:CDS 40.0%
! AGGGTGTTAATGGGTCTAAT+GGG + chr7_3:244346-244365 Msa1087530:CDS 40.0%
CTTCAAACAATGCTTCACGA+AGG + chr7_3:244457-244476 Msa1087530:CDS 40.0%
TGACAGTTGTTGTAGCACAT+TGG - chr7_3:242993-243012 None:intergenic 40.0%
! GTTTTGCTACAGTCACTGTA+AGG - chr7_3:243078-243097 None:intergenic 40.0%
TTTCATATATTTGCCGCTCC+CGG - chr7_3:243228-243247 None:intergenic 40.0%
GACCTTTGGACTGAAAATGA+TGG + chr7_3:243394-243413 Msa1087530:CDS 40.0%
! GTCCATCATTTTCAGTCCAA+AGG - chr7_3:243399-243418 None:intergenic 40.0%
!! TTAGGAAAGTACCTAGCAGA+AGG - chr7_3:243451-243470 None:intergenic 40.0%
TCTGCTAGGTACTTTCCTAA+AGG + chr7_3:243451-243470 Msa1087530:CDS 40.0%
CTGCTAGGTACTTTCCTAAA+GGG + chr7_3:243452-243471 Msa1087530:CDS 40.0%
TGCTAGGTACTTTCCTAAAG+GGG + chr7_3:243453-243472 Msa1087530:CDS 40.0%
! GGTTACTAGTGATGACTTGT+TGG + chr7_3:243504-243523 Msa1087530:CDS 40.0%
!! TACTAGTGATGACTTGTTGG+TGG + chr7_3:243507-243526 Msa1087530:CDS 40.0%
!! AGAGGATGTTGATGATTGTG+AGG + chr7_3:243573-243592 Msa1087530:CDS 40.0%
!! GAGGATGTTGATGATTGTGA+GGG + chr7_3:243574-243593 Msa1087530:CDS 40.0%
CTTCTCCTTTGAATTATGGG+AGG + chr7_3:243605-243624 Msa1087530:CDS 40.0%
TCATCCCTCCCATAATTCAA+AGG - chr7_3:243613-243632 None:intergenic 40.0%
GCAGTCGATTGCAAAAGAAT+GGG + chr7_3:243644-243663 Msa1087530:CDS 40.0%
CGATTGCAAAAGAATGGGAA+TGG + chr7_3:243649-243668 Msa1087530:CDS 40.0%
TGCAAAAGAATGGGAATGGA+AGG + chr7_3:243653-243672 Msa1087530:CDS 40.0%
AAAAGAATGGGAATGGAAGG+AGG + chr7_3:243656-243675 Msa1087530:CDS 40.0%
AGGAGTGAATTGAATGTTCG+TGG + chr7_3:243742-243761 Msa1087530:CDS 40.0%
AGTGAATTGAATGTTCGTGG+TGG + chr7_3:243745-243764 Msa1087530:CDS 40.0%
!! CGTGGTGGATTGAAAAAGAA+CGG + chr7_3:243760-243779 Msa1087530:CDS 40.0%
!! GTGGTGGATTGAAAAAGAAC+GGG + chr7_3:243761-243780 Msa1087530:CDS 40.0%
GGATTGAAAAAGAACGGGAA+TGG + chr7_3:243766-243785 Msa1087530:CDS 40.0%
TGAAAAAGAACGGGAATGGA+AGG + chr7_3:243770-243789 Msa1087530:CDS 40.0%
CGTTCTTCTCATTTGAGTAC+TGG + chr7_3:243835-243854 Msa1087530:CDS 40.0%
AGAAGTGAACTGAATGTTCG+TGG + chr7_3:243859-243878 Msa1087530:CDS 40.0%
TCAGAAAGAATGAAAGTGGG+AGG + chr7_3:243887-243906 Msa1087530:CDS 40.0%
ATGTCGATCAGTTCCATGAT+GGG + chr7_3:243926-243945 Msa1087530:CDS 40.0%
AACGGGAGTAGGTATTCATT+AGG + chr7_3:244012-244031 Msa1087530:CDS 40.0%
ACGGGAGTAGGTATTCATTA+GGG + chr7_3:244013-244032 Msa1087530:CDS 40.0%
!! GCGAGTTTTGATGGCAATTT+CGG + chr7_3:244210-244229 Msa1087530:CDS 40.0%
!! CGAGTTTTGATGGCAATTTC+GGG + chr7_3:244211-244230 Msa1087530:CDS 40.0%
GATGGCAATTTCGGGAATAA+AGG + chr7_3:244219-244238 Msa1087530:CDS 40.0%
GCTGTTAGGTCTAATGAATC+TGG + chr7_3:244276-244295 Msa1087530:CDS 40.0%
TGATATTAGATCGAGGAGGA+AGG + chr7_3:244299-244318 Msa1087530:CDS 40.0%
!! AAGGGTGTTAATGGGTCTAA+TGG + chr7_3:244345-244364 Msa1087530:CDS 40.0%
! AGGGTGTTAATGGGTCTAAT+GGG + chr7_3:244346-244365 Msa1087530:CDS 40.0%
CTTCAAACAATGCTTCACGA+AGG + chr7_3:244457-244476 Msa1087530:CDS 40.0%
CAGTTGTTGTAGCACATTGG+CGG - chr7_3:242990-243009 None:intergenic 45.0%
ATCACAGTTGAACGAGAAGG+TGG - chr7_3:243100-243119 None:intergenic 45.0%
TCGTTCAACTGTGATCCGAA+TGG + chr7_3:243105-243124 Msa1087530:CDS 45.0%
CGTTCAACTGTGATCCGAAT+GGG + chr7_3:243106-243125 Msa1087530:CDS 45.0%
! TAAGAGTTGCTTGGCCTTCT+TGG - chr7_3:243191-243210 None:intergenic 45.0%
GAAGGCCAAGCAACTCTTAA+AGG + chr7_3:243192-243211 Msa1087530:CDS 45.0%
! TGATGAGCAGCTCAAGGTTT+TGG + chr7_3:243342-243361 Msa1087530:CDS 45.0%
!!! AGCTCAAGGTTTTGGCTGAT+AGG + chr7_3:243350-243369 Msa1087530:CDS 45.0%
ATAGGTTTCAGAAGCCTGGT+GGG + chr7_3:243368-243387 Msa1087530:CDS 45.0%
! TCAGGGGTTTGAAACAACTG+TGG - chr7_3:243421-243440 None:intergenic 45.0%
TAGCAGAAGGCAACTCATCA+GGG - chr7_3:243438-243457 None:intergenic 45.0%
!! TGATGACTTGTTGGTGGAAC+CGG + chr7_3:243513-243532 Msa1087530:CDS 45.0%
!!! GAACCGGATGTTTTGGAAGA+TGG + chr7_3:243529-243548 Msa1087530:CDS 45.0%
CCACCATCTTCCAAAACATC+CGG - chr7_3:243535-243554 None:intergenic 45.0%
!!! GATGTTTTGGAAGATGGTGG+CGG + chr7_3:243535-243554 Msa1087530:CDS 45.0%
!! GATGTTGATGATTGTGAGGG+TGG + chr7_3:243577-243596 Msa1087530:CDS 45.0%
GGCAGTCGATTGCAAAAGAA+TGG + chr7_3:243643-243662 Msa1087530:CDS 45.0%
AATGTTGATCGGTCCCATGA+TGG + chr7_3:243691-243710 Msa1087530:CDS 45.0%
ATGTTGATCGGTCCCATGAT+GGG + chr7_3:243692-243711 Msa1087530:CDS 45.0%
!! CTTCTCATTTGAGTGCTGAG+AGG + chr7_3:243722-243741 Msa1087530:CDS 45.0%
AAAAGAACGGGAATGGAAGG+AGG + chr7_3:243773-243792 Msa1087530:CDS 45.0%
!! TGGAAGGAGGTATTTGTCAG+AGG + chr7_3:243669-243688 Msa1087530:CDS 45.0%
AGAAGAACGCTCTCCATCAA+GGG - chr7_3:243824-243843 None:intergenic 45.0%
AGTGAACTGAATGTTCGTGG+TGG + chr7_3:243862-243881 Msa1087530:CDS 45.0%
TGGAACTGATCGACATCTTC+TGG - chr7_3:243922-243941 None:intergenic 45.0%
GATGTCGATCAGTTCCATGA+TGG + chr7_3:243925-243944 Msa1087530:CDS 45.0%
TGTCGATCAGTTCCATGATG+GGG + chr7_3:243927-243946 Msa1087530:CDS 45.0%
! AAGACCGAGTTGAATGTTCG+TGG + chr7_3:243976-243995 Msa1087530:CDS 45.0%
TCCACCACGAACATTCAACT+CGG - chr7_3:243983-244002 None:intergenic 45.0%
!! CGTGGTGGATTGAGAAAGAA+CGG + chr7_3:243994-244013 Msa1087530:CDS 45.0%
!! GTGGTGGATTGAGAAAGAAC+GGG + chr7_3:243995-244014 Msa1087530:CDS 45.0%
GATTGAGAAAGAACGGGAGT+AGG + chr7_3:244001-244020 Msa1087530:CDS 45.0%
CGGGAGTAGGTATTCATTAG+GGG + chr7_3:244014-244033 Msa1087530:CDS 45.0%
GATGCTAGAATGAGGAAGCA+CGG + chr7_3:244105-244124 Msa1087530:CDS 45.0%
! ATGCTAGAATGAGGAAGCAC+GGG + chr7_3:244106-244125 Msa1087530:CDS 45.0%
!! AGGAATGGAGCGAGTTTTGA+TGG + chr7_3:244201-244220 Msa1087530:CDS 45.0%
! GAATAAAGGGAGTGCAAGGA+GGG + chr7_3:244233-244252 Msa1087530:CDS 45.0%
!! AGGAGGGTTTTATCCAACGA+TGG + chr7_3:244249-244268 Msa1087530:CDS 45.0%
CTGGTGATATTAGATCGAGG+AGG + chr7_3:244295-244314 Msa1087530:CDS 45.0%
TATGCAGGAAGAGATGCTTC+TGG + chr7_3:244372-244391 Msa1087530:CDS 45.0%
ATGGAATTACTCCCTCTCTG+TGG - chr7_3:244402-244421 None:intergenic 45.0%
AGAGGGAGTAATTCCATTGC+AGG + chr7_3:244405-244424 Msa1087530:CDS 45.0%
CAGTTGTTGTAGCACATTGG+CGG - chr7_3:242990-243009 None:intergenic 45.0%
ATCACAGTTGAACGAGAAGG+TGG - chr7_3:243100-243119 None:intergenic 45.0%
TCGTTCAACTGTGATCCGAA+TGG + chr7_3:243105-243124 Msa1087530:CDS 45.0%
CGTTCAACTGTGATCCGAAT+GGG + chr7_3:243106-243125 Msa1087530:CDS 45.0%
! TAAGAGTTGCTTGGCCTTCT+TGG - chr7_3:243191-243210 None:intergenic 45.0%
GAAGGCCAAGCAACTCTTAA+AGG + chr7_3:243192-243211 Msa1087530:CDS 45.0%
! TGATGAGCAGCTCAAGGTTT+TGG + chr7_3:243342-243361 Msa1087530:CDS 45.0%
!!! AGCTCAAGGTTTTGGCTGAT+AGG + chr7_3:243350-243369 Msa1087530:CDS 45.0%
ATAGGTTTCAGAAGCCTGGT+GGG + chr7_3:243368-243387 Msa1087530:CDS 45.0%
! TCAGGGGTTTGAAACAACTG+TGG - chr7_3:243421-243440 None:intergenic 45.0%
TAGCAGAAGGCAACTCATCA+GGG - chr7_3:243438-243457 None:intergenic 45.0%
!! TGATGACTTGTTGGTGGAAC+CGG + chr7_3:243513-243532 Msa1087530:CDS 45.0%
!!! GAACCGGATGTTTTGGAAGA+TGG + chr7_3:243529-243548 Msa1087530:CDS 45.0%
CCACCATCTTCCAAAACATC+CGG - chr7_3:243535-243554 None:intergenic 45.0%
!!! GATGTTTTGGAAGATGGTGG+CGG + chr7_3:243535-243554 Msa1087530:CDS 45.0%
!! GATGTTGATGATTGTGAGGG+TGG + chr7_3:243577-243596 Msa1087530:CDS 45.0%
GGCAGTCGATTGCAAAAGAA+TGG + chr7_3:243643-243662 Msa1087530:CDS 45.0%
AATGTTGATCGGTCCCATGA+TGG + chr7_3:243691-243710 Msa1087530:CDS 45.0%
ATGTTGATCGGTCCCATGAT+GGG + chr7_3:243692-243711 Msa1087530:CDS 45.0%
!! CTTCTCATTTGAGTGCTGAG+AGG + chr7_3:243722-243741 Msa1087530:CDS 45.0%
AAAAGAACGGGAATGGAAGG+AGG + chr7_3:243773-243792 Msa1087530:CDS 45.0%
!! TGGAAGGAGGTATTTGTCAG+AGG + chr7_3:243669-243688 Msa1087530:CDS 45.0%
AGAAGAACGCTCTCCATCAA+GGG - chr7_3:243824-243843 None:intergenic 45.0%
AGTGAACTGAATGTTCGTGG+TGG + chr7_3:243862-243881 Msa1087530:CDS 45.0%
TGGAACTGATCGACATCTTC+TGG - chr7_3:243922-243941 None:intergenic 45.0%
GATGTCGATCAGTTCCATGA+TGG + chr7_3:243925-243944 Msa1087530:CDS 45.0%
TGTCGATCAGTTCCATGATG+GGG + chr7_3:243927-243946 Msa1087530:CDS 45.0%
! AAGACCGAGTTGAATGTTCG+TGG + chr7_3:243976-243995 Msa1087530:CDS 45.0%
TCCACCACGAACATTCAACT+CGG - chr7_3:243983-244002 None:intergenic 45.0%
!! CGTGGTGGATTGAGAAAGAA+CGG + chr7_3:243994-244013 Msa1087530:CDS 45.0%
!! GTGGTGGATTGAGAAAGAAC+GGG + chr7_3:243995-244014 Msa1087530:CDS 45.0%
GATTGAGAAAGAACGGGAGT+AGG + chr7_3:244001-244020 Msa1087530:CDS 45.0%
CGGGAGTAGGTATTCATTAG+GGG + chr7_3:244014-244033 Msa1087530:CDS 45.0%
GATGCTAGAATGAGGAAGCA+CGG + chr7_3:244105-244124 Msa1087530:CDS 45.0%
! ATGCTAGAATGAGGAAGCAC+GGG + chr7_3:244106-244125 Msa1087530:CDS 45.0%
!! AGGAATGGAGCGAGTTTTGA+TGG + chr7_3:244201-244220 Msa1087530:CDS 45.0%
! GAATAAAGGGAGTGCAAGGA+GGG + chr7_3:244233-244252 Msa1087530:CDS 45.0%
!! AGGAGGGTTTTATCCAACGA+TGG + chr7_3:244249-244268 Msa1087530:CDS 45.0%
CTGGTGATATTAGATCGAGG+AGG + chr7_3:244295-244314 Msa1087530:CDS 45.0%
TATGCAGGAAGAGATGCTTC+TGG + chr7_3:244372-244391 Msa1087530:CDS 45.0%
ATGGAATTACTCCCTCTCTG+TGG - chr7_3:244402-244421 None:intergenic 45.0%
AGAGGGAGTAATTCCATTGC+AGG + chr7_3:244405-244424 Msa1087530:CDS 45.0%
CGGATCACAGTTGAACGAGA+AGG - chr7_3:243103-243122 None:intergenic 50.0%
TCAACTGTGATCCGAATGGG+TGG + chr7_3:243109-243128 Msa1087530:CDS 50.0%
CATACGCTTCCATTGCCACT+TGG - chr7_3:243164-243183 None:intergenic 50.0%
! TCGCGCCTTTAAGAGTTGCT+TGG - chr7_3:243200-243219 None:intergenic 50.0%
TAAGGCTGCTGTGTCTGAGT+TGG + chr7_3:243267-243286 Msa1087530:CDS 50.0%
CAAAGCTGATGAGCAGCTCA+AGG + chr7_3:243336-243355 Msa1087530:CDS 50.0%
GCTGATAGGTTTCAGAAGCC+TGG + chr7_3:243364-243383 Msa1087530:CDS 50.0%
GATAGGTTTCAGAAGCCTGG+TGG + chr7_3:243367-243386 Msa1087530:CDS 50.0%
AGCAGAAGGCAACTCATCAG+GGG - chr7_3:243437-243456 None:intergenic 50.0%
CTAGCAGAAGGCAACTCATC+AGG - chr7_3:243439-243458 None:intergenic 50.0%
CTGATGAGTTGCCTTCTGCT+AGG + chr7_3:243437-243456 Msa1087530:CDS 50.0%
!! GTTGGTGGAACCGGATGTTT+TGG + chr7_3:243522-243541 Msa1087530:CDS 50.0%
!!! CCGGATGTTTTGGAAGATGG+TGG + chr7_3:243532-243551 Msa1087530:CDS 50.0%
GGGAGGGATGAAGTGAATGT+TGG + chr7_3:243622-243641 Msa1087530:CDS 50.0%
TGTTGATCGGTCCCATGATG+GGG + chr7_3:243693-243712 Msa1087530:CDS 50.0%
AGAAGAACGCTCCCCATCAT+GGG - chr7_3:243707-243726 None:intergenic 50.0%
GATGTTGTTCGGTCCCTTGA+TGG + chr7_3:243808-243827 Msa1087530:CDS 50.0%
GAGAAGAACGCTCTCCATCA+AGG - chr7_3:243825-243844 None:intergenic 50.0%
! ACCGAGTTGAATGTTCGTGG+TGG + chr7_3:243979-243998 Msa1087530:CDS 50.0%
! AGAATGAGGAAGCACGGGAA+TGG + chr7_3:244111-244130 Msa1087530:CDS 50.0%
! TCCAAAGGGTGTAGATGGGT+CGG + chr7_3:244146-244165 Msa1087530:CDS 50.0%
GTTCTTCTCCTTCACATGCG+AGG + chr7_3:244181-244200 Msa1087530:CDS 50.0%
TCTCCTTCACATGCGAGGAA+TGG + chr7_3:244186-244205 Msa1087530:CDS 50.0%
! TCGGGAATAAAGGGAGTGCA+AGG + chr7_3:244229-244248 Msa1087530:CDS 50.0%
! GGAATAAAGGGAGTGCAAGG+AGG + chr7_3:244232-244251 Msa1087530:CDS 50.0%
CCTAACAGCATCACCATCGT+TGG - chr7_3:244265-244284 None:intergenic 50.0%
! CCAACGATGGTGATGCTGTT+AGG + chr7_3:244262-244281 Msa1087530:CDS 50.0%
GGAGGAAGGACAGTAGAAAG+AGG + chr7_3:244313-244332 Msa1087530:CDS 50.0%
GGGTCTAATGGGATGTATGC+AGG + chr7_3:244357-244376 Msa1087530:CDS 50.0%
CTTCTGGCAAACCACAGAGA+GGG + chr7_3:244388-244407 Msa1087530:CDS 50.0%
GGAGTAATTCCATTGCAGGC+AGG + chr7_3:244409-244428 Msa1087530:CDS 50.0%
TCCATTGCAGGCAGGAGATA+TGG + chr7_3:244417-244436 Msa1087530:CDS 50.0%
TCCATATCTCCTGCCTGCAA+TGG - chr7_3:244421-244440 None:intergenic 50.0%
AGCAACCTGACTCTACAAGC+TGG + chr7_3:244553-244572 Msa1087530:CDS 50.0%
CGGATCACAGTTGAACGAGA+AGG - chr7_3:243103-243122 None:intergenic 50.0%
TCAACTGTGATCCGAATGGG+TGG + chr7_3:243109-243128 Msa1087530:CDS 50.0%
CATACGCTTCCATTGCCACT+TGG - chr7_3:243164-243183 None:intergenic 50.0%
! TCGCGCCTTTAAGAGTTGCT+TGG - chr7_3:243200-243219 None:intergenic 50.0%
TAAGGCTGCTGTGTCTGAGT+TGG + chr7_3:243267-243286 Msa1087530:CDS 50.0%
CAAAGCTGATGAGCAGCTCA+AGG + chr7_3:243336-243355 Msa1087530:CDS 50.0%
GCTGATAGGTTTCAGAAGCC+TGG + chr7_3:243364-243383 Msa1087530:CDS 50.0%
GATAGGTTTCAGAAGCCTGG+TGG + chr7_3:243367-243386 Msa1087530:CDS 50.0%
AGCAGAAGGCAACTCATCAG+GGG - chr7_3:243437-243456 None:intergenic 50.0%
CTAGCAGAAGGCAACTCATC+AGG - chr7_3:243439-243458 None:intergenic 50.0%
CTGATGAGTTGCCTTCTGCT+AGG + chr7_3:243437-243456 Msa1087530:CDS 50.0%
!! GTTGGTGGAACCGGATGTTT+TGG + chr7_3:243522-243541 Msa1087530:CDS 50.0%
!!! CCGGATGTTTTGGAAGATGG+TGG + chr7_3:243532-243551 Msa1087530:CDS 50.0%
GGGAGGGATGAAGTGAATGT+TGG + chr7_3:243622-243641 Msa1087530:CDS 50.0%
TGTTGATCGGTCCCATGATG+GGG + chr7_3:243693-243712 Msa1087530:CDS 50.0%
AGAAGAACGCTCCCCATCAT+GGG - chr7_3:243707-243726 None:intergenic 50.0%
GATGTTGTTCGGTCCCTTGA+TGG + chr7_3:243808-243827 Msa1087530:CDS 50.0%
GAGAAGAACGCTCTCCATCA+AGG - chr7_3:243825-243844 None:intergenic 50.0%
! ACCGAGTTGAATGTTCGTGG+TGG + chr7_3:243979-243998 Msa1087530:CDS 50.0%
! AGAATGAGGAAGCACGGGAA+TGG + chr7_3:244111-244130 Msa1087530:CDS 50.0%
! TCCAAAGGGTGTAGATGGGT+CGG + chr7_3:244146-244165 Msa1087530:CDS 50.0%
GTTCTTCTCCTTCACATGCG+AGG + chr7_3:244181-244200 Msa1087530:CDS 50.0%
TCTCCTTCACATGCGAGGAA+TGG + chr7_3:244186-244205 Msa1087530:CDS 50.0%
! TCGGGAATAAAGGGAGTGCA+AGG + chr7_3:244229-244248 Msa1087530:CDS 50.0%
! GGAATAAAGGGAGTGCAAGG+AGG + chr7_3:244232-244251 Msa1087530:CDS 50.0%
CCTAACAGCATCACCATCGT+TGG - chr7_3:244265-244284 None:intergenic 50.0%
! CCAACGATGGTGATGCTGTT+AGG + chr7_3:244262-244281 Msa1087530:CDS 50.0%
GGAGGAAGGACAGTAGAAAG+AGG + chr7_3:244313-244332 Msa1087530:CDS 50.0%
GGGTCTAATGGGATGTATGC+AGG + chr7_3:244357-244376 Msa1087530:CDS 50.0%
CTTCTGGCAAACCACAGAGA+GGG + chr7_3:244388-244407 Msa1087530:CDS 50.0%
GGAGTAATTCCATTGCAGGC+AGG + chr7_3:244409-244428 Msa1087530:CDS 50.0%
TCCATTGCAGGCAGGAGATA+TGG + chr7_3:244417-244436 Msa1087530:CDS 50.0%
TCCATATCTCCTGCCTGCAA+TGG - chr7_3:244421-244440 None:intergenic 50.0%
AGCAACCTGACTCTACAAGC+TGG + chr7_3:244553-244572 Msa1087530:CDS 50.0%
ACTGTGATCCGAATGGGTGG+TGG + chr7_3:243112-243131 Msa1087530:CDS 55.0%
CTGTGATCCGAATGGGTGGT+GGG + chr7_3:243113-243132 Msa1087530:CDS 55.0%
! GTGGCAATGGAAGCGTATGC+AGG + chr7_3:243165-243184 Msa1087530:CDS 55.0%
GAAGCGTATGCAGGCCAAGA+AGG + chr7_3:243174-243193 Msa1087530:CDS 55.0%
! TCTTAAAGGCGCGACTGTGC+CGG + chr7_3:243206-243225 Msa1087530:CDS 55.0%
GAGGAAGAGGGCTGAGCTTA+AGG + chr7_3:243249-243268 Msa1087530:CDS 55.0%
! CTGCTGTGTCTGAGTTGGAG+AGG + chr7_3:243272-243291 Msa1087530:CDS 55.0%
! TGTCTGAGTTGGAGAGGCCT+TGG + chr7_3:243278-243297 Msa1087530:CDS 55.0%
! GTCTGAGTTGGAGAGGCCTT+GGG + chr7_3:243279-243298 Msa1087530:CDS 55.0%
!! AGCCTGGTGGGTTTGACCTT+TGG + chr7_3:243380-243399 Msa1087530:CDS 55.0%
GTCCAAAGGTCAAACCCACC+AGG - chr7_3:243385-243404 None:intergenic 55.0%
!! TTGGAAGATGGTGGCGGTGA+AGG + chr7_3:243541-243560 Msa1087530:CDS 55.0%
!! TGGAAGATGGTGGCGGTGAA+GGG + chr7_3:243542-243561 Msa1087530:CDS 55.0%
!! ATGGTGGCGGTGAAGGGTAT+TGG + chr7_3:243548-243567 Msa1087530:CDS 55.0%
!! CGGTGAAGGGTATTGGTCAG+AGG + chr7_3:243555-243574 Msa1087530:CDS 55.0%
GAGAAGAACGCTCCCCATCA+TGG - chr7_3:243708-243727 None:intergenic 55.0%
GAGAAGAACGCTCCCCATCA+TGG - chr7_3:243708-243727 None:intergenic 55.0%
! TGAGGAAGCACGGGAATGGA+AGG + chr7_3:244115-244134 Msa1087530:CDS 55.0%
TCCGACCCATCTACACCCTT+TGG - chr7_3:244150-244169 None:intergenic 55.0%
GCTCCATTCCTCGCATGTGA+AGG - chr7_3:244192-244211 None:intergenic 55.0%
GCTTCTGGCAAACCACAGAG+AGG + chr7_3:244387-244406 Msa1087530:CDS 55.0%
ACTGTGATCCGAATGGGTGG+TGG + chr7_3:243112-243131 Msa1087530:CDS 55.0%
CTGTGATCCGAATGGGTGGT+GGG + chr7_3:243113-243132 Msa1087530:CDS 55.0%
! GTGGCAATGGAAGCGTATGC+AGG + chr7_3:243165-243184 Msa1087530:CDS 55.0%
GAAGCGTATGCAGGCCAAGA+AGG + chr7_3:243174-243193 Msa1087530:CDS 55.0%
! TCTTAAAGGCGCGACTGTGC+CGG + chr7_3:243206-243225 Msa1087530:CDS 55.0%
GAGGAAGAGGGCTGAGCTTA+AGG + chr7_3:243249-243268 Msa1087530:CDS 55.0%
! CTGCTGTGTCTGAGTTGGAG+AGG + chr7_3:243272-243291 Msa1087530:CDS 55.0%
! TGTCTGAGTTGGAGAGGCCT+TGG + chr7_3:243278-243297 Msa1087530:CDS 55.0%
! GTCTGAGTTGGAGAGGCCTT+GGG + chr7_3:243279-243298 Msa1087530:CDS 55.0%
!! AGCCTGGTGGGTTTGACCTT+TGG + chr7_3:243380-243399 Msa1087530:CDS 55.0%
GTCCAAAGGTCAAACCCACC+AGG - chr7_3:243385-243404 None:intergenic 55.0%
!! TTGGAAGATGGTGGCGGTGA+AGG + chr7_3:243541-243560 Msa1087530:CDS 55.0%
!! TGGAAGATGGTGGCGGTGAA+GGG + chr7_3:243542-243561 Msa1087530:CDS 55.0%
!! ATGGTGGCGGTGAAGGGTAT+TGG + chr7_3:243548-243567 Msa1087530:CDS 55.0%
!! CGGTGAAGGGTATTGGTCAG+AGG + chr7_3:243555-243574 Msa1087530:CDS 55.0%
GAGAAGAACGCTCCCCATCA+TGG - chr7_3:243708-243727 None:intergenic 55.0%
GAGAAGAACGCTCCCCATCA+TGG - chr7_3:243708-243727 None:intergenic 55.0%
! TGAGGAAGCACGGGAATGGA+AGG + chr7_3:244115-244134 Msa1087530:CDS 55.0%
TCCGACCCATCTACACCCTT+TGG - chr7_3:244150-244169 None:intergenic 55.0%
GCTCCATTCCTCGCATGTGA+AGG - chr7_3:244192-244211 None:intergenic 55.0%
GCTTCTGGCAAACCACAGAG+AGG + chr7_3:244387-244406 Msa1087530:CDS 55.0%
TCCTTGGCCCACCACCCATT+CGG - chr7_3:243123-243142 None:intergenic 60.0%
GGCCAAGGACGTATCCAGGT+GGG + chr7_3:243134-243153 Msa1087530:CDS 60.0%
GCCAAGGACGTATCCAGGTG+GGG + chr7_3:243135-243154 Msa1087530:CDS 60.0%
ACCCCACCTGGATACGTCCT+TGG - chr7_3:243139-243158 None:intergenic 60.0%
! ATCCAGGTGGGGTGTCCAAG+TGG + chr7_3:243146-243165 Msa1087530:CDS 60.0%
! GTGGGGTGTCCAAGTGGCAA+TGG + chr7_3:243152-243171 Msa1087530:CDS 60.0%
! CTTAAAGGCGCGACTGTGCC+GGG + chr7_3:243207-243226 Msa1087530:CDS 60.0%
! TGAGTTGGAGAGGCCTTGGG+AGG + chr7_3:243282-243301 Msa1087530:CDS 60.0%
GGCTTCTCAACCACCTCCCA+AGG - chr7_3:243298-243317 None:intergenic 60.0%
TCCTTGGCCCACCACCCATT+CGG - chr7_3:243123-243142 None:intergenic 60.0%
GGCCAAGGACGTATCCAGGT+GGG + chr7_3:243134-243153 Msa1087530:CDS 60.0%
GCCAAGGACGTATCCAGGTG+GGG + chr7_3:243135-243154 Msa1087530:CDS 60.0%
ACCCCACCTGGATACGTCCT+TGG - chr7_3:243139-243158 None:intergenic 60.0%
! ATCCAGGTGGGGTGTCCAAG+TGG + chr7_3:243146-243165 Msa1087530:CDS 60.0%
! GTGGGGTGTCCAAGTGGCAA+TGG + chr7_3:243152-243171 Msa1087530:CDS 60.0%
! CTTAAAGGCGCGACTGTGCC+GGG + chr7_3:243207-243226 Msa1087530:CDS 60.0%
! TGAGTTGGAGAGGCCTTGGG+AGG + chr7_3:243282-243301 Msa1087530:CDS 60.0%
GGCTTCTCAACCACCTCCCA+AGG - chr7_3:243298-243317 None:intergenic 60.0%
!! TCCGAATGGGTGGTGGGCCA+AGG + chr7_3:243119-243138 Msa1087530:CDS 65.0%
GGTGGGCCAAGGACGTATCC+AGG + chr7_3:243130-243149 Msa1087530:CDS 65.0%
GGGCCAAGGACGTATCCAGG+TGG + chr7_3:243133-243152 Msa1087530:CDS 65.0%
! TGCCACTTGGACACCCCACC+TGG - chr7_3:243151-243170 None:intergenic 65.0%
GTTGGAGAGGCCTTGGGAGG+TGG + chr7_3:243285-243304 Msa1087530:CDS 65.0%
!! TCCGAATGGGTGGTGGGCCA+AGG + chr7_3:243119-243138 Msa1087530:CDS 65.0%
GGTGGGCCAAGGACGTATCC+AGG + chr7_3:243130-243149 Msa1087530:CDS 65.0%
GGGCCAAGGACGTATCCAGG+TGG + chr7_3:243133-243152 Msa1087530:CDS 65.0%
! TGCCACTTGGACACCCCACC+TGG - chr7_3:243151-243170 None:intergenic 65.0%
GTTGGAGAGGCCTTGGGAGG+TGG + chr7_3:243285-243304 Msa1087530:CDS 65.0%
AGGCGCGACTGTGCCGGGAG+CGG + chr7_3:243212-243231 Msa1087530:CDS 75.0%
AGGCGCGACTGTGCCGGGAG+CGG + chr7_3:243212-243231 Msa1087530:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 242974 244578 242974 ID=Msa1087530;Name=Msa1087530
chr7_3 mRNA 242974 244578 242974 ID=Msa1087530-mRNA-1;Parent=Msa1087530;Name=Msa1087530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|534
chr7_3 exon 242974 244578 242974 ID=Msa1087530-mRNA-1:exon:87;Parent=Msa1087530-mRNA-1
chr7_3 CDS 242974 244578 242974 ID=Msa1087530-mRNA-1:cds;Parent=Msa1087530-mRNA-1
Gene Sequence

>Msa1087530

ATGAACGTGTTATCCGCCAATGTGCTACAACAACTGTCATTTTCATTCTCAAAATCTTTGTCAAGTTTTGAATGGCAGAACAAGAACAAGAATGTGCTGTTCCTTACAGTGACTGTAGCAAAACCACCTTCTCGTTCAACTGTGATCCGAATGGGTGGTGGGCCAAGGACGTATCCAGGTGGGGTGTCCAAGTGGCAATGGAAGCGTATGCAGGCCAAGAAGGCCAAGCAACTCTTAAAGGCGCGACTGTGCCGGGAGCGGCAAATATATGAAATGAGGAAGAGGGCTGAGCTTAAGGCTGCTGTGTCTGAGTTGGAGAGGCCTTGGGAGGTGGTTGAGAAGCCCCCTAAGTTGTTCTCTATCAAAGCTGATGAGCAGCTCAAGGTTTTGGCTGATAGGTTTCAGAAGCCTGGTGGGTTTGACCTTTGGACTGAAAATGATGGACCACAGTTGTTTCAAACCCCTGATGAGTTGCCTTCTGCTAGGTACTTTCCTAAAGGGGTTGTTCATAGTATCAAGCCTTATATGAAGGTTACTAGTGATGACTTGTTGGTGGAACCGGATGTTTTGGAAGATGGTGGCGGTGAAGGGTATTGGTCAGAGGATGTTGATGATTGTGAGGGTGGTTCTTCTTCTCCTTTGAATTATGGGAGGGATGAAGTGAATGTTGGCAGTCGATTGCAAAAGAATGGGAATGGAAGGAGGTATTTGTCAGATAATGTTGATCGGTCCCATGATGGGGAGCGTTCTTCTCATTTGAGTGCTGAGAGGAGTGAATTGAATGTTCGTGGTGGATTGAAAAAGAACGGGAATGGAAGGAGGTATTTGTCAGAGGATGTTGTTCGGTCCCTTGATGGAGAGCGTTCTTCTCATTTGAGTACTGGGAGAAGTGAACTGAATGTTCGTGGTGGATTCAGAAAGAATGAAAGTGGGAGGAGTTATTTGCCAGAAGATGTCGATCAGTTCCATGATGGGGAGCGTTCTTCTCATTTGAGTACTAGGAAGACCGAGTTGAATGTTCGTGGTGGATTGAGAAAGAACGGGAGTAGGTATTCATTAGGGGATGTTGATCGGCCAGATAATGAAGATCATTCTTCTTCTTTGAATTCTAGGAGGAATGGATCAAATATTGATGCTAGAATGAGGAAGCACGGGAATGGAAGGAAGTTTATTCCAAAGGGTGTAGATGGGTCGGATGATGCAGAGCGTTCTTCTCCTTCACATGCGAGGAATGGAGCGAGTTTTGATGGCAATTTCGGGAATAAAGGGAGTGCAAGGAGGGTTTTATCCAACGATGGTGATGCTGTTAGGTCTAATGAATCTGGTGATATTAGATCGAGGAGGAAGGACAGTAGAAAGAGGTTTATGTCAAAGGGTGTTAATGGGTCTAATGGGATGTATGCAGGAAGAGATGCTTCTGGCAAACCACAGAGAGGGAGTAATTCCATTGCAGGCAGGAGATATGGAAAATATACTCAGAGGACTTCAAACAATGCTTCACGAAGGGTTAGAGATGCAGATTCCGAAGTTTATGATATGGGTTTACAACAAGATGGAAGTTATCAATTCTTACAGAATGAGCAACCTGACTCTACAAGCTGGTAA
Protein sequence

>Msa1087530

MNVLSANVLQQLSFSFSKSLSSFEWQNKNKNVLFLTVTVAKPPSRSTVIRMGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKPPKLFSIKADEQLKVLADRFQKPGGFDLWTENDGPQLFQTPDELPSARYFPKGVVHSIKPYMKVTSDDLLVEPDVLEDGGGEGYWSEDVDDCEGGSSSPLNYGRDEVNVGSRLQKNGNGRRYLSDNVDRSHDGERSSHLSAERSELNVRGGLKKNGNGRRYLSEDVVRSLDGERSSHLSTGRSELNVRGGFRKNESGRSYLPEDVDQFHDGERSSHLSTRKTELNVRGGLRKNGSRYSLGDVDRPDNEDHSSSLNSRRNGSNIDARMRKHGNGRKFIPKGVDGSDDAERSSPSHARNGASFDGNFGNKGSARRVLSNDGDAVRSNESGDIRSRRKDSRKRFMSKGVNGSNGMYAGRDASGKPQRGSNSIAGRRYGKYTQRTSNNASRRVRDADSEVYDMGLQQDGSYQFLQNEQPDSTSW*