AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0091460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091460 MtrunA17_Chr1g0212361 83.333 60 10 0 1 60 114 173 8.63e-30 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091460 AT1G50380.1 76.667 60 14 0 1 60 56 115 2.09e-28 105
Msa0091460 AT1G50380.2 76.667 60 14 0 1 60 122 181 2.10e-28 105

Find 325 sgRNAs with CRISPR-Local

Find 792 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTACTAACTTGTTATT+TGG 0.087936 1_2:+73583180 None:intergenic
ACACAACAATTTGGGTTATT+TGG 0.105940 1_2:-73576544 Msa0091460:three_prime_UTR
ATTATTGTTAATTATTATTA+TGG 0.123662 1_2:-73584982 Msa0091460:five_prime_UTR
TCAGATCCATTACTACTTTA+TGG 0.129739 1_2:-73582109 Msa0091460:three_prime_UTR
CTAGAGATAATCTTGCTTTA+AGG 0.136982 1_2:-73576796 Msa0091460:three_prime_UTR
TGGGACACATGTATGATTTC+TGG 0.161398 1_2:-73584962 Msa0091460:five_prime_UTR
TAATTTGGCACACAACAATT+TGG 0.167877 1_2:-73576553 Msa0091460:three_prime_UTR
TGTTGGTGGGCTGTTTGTTT+TGG 0.168588 1_2:-73576170 Msa0091460:three_prime_UTR
TCCCATATAGATTATTATTA+TGG 0.185201 1_2:-73585128 Msa0091460:five_prime_UTR
TGGGACTGGGGTCTGCTTGC+TGG 0.185844 1_2:-73576204 Msa0091460:three_prime_UTR
CTAAAATCTAATAATAAAAT+TGG 0.186880 1_2:-73584818 Msa0091460:five_prime_UTR
CGAAGGGTCTTTGGTTAATT+TGG 0.191038 1_2:-73576568 Msa0091460:three_prime_UTR
ACCAAATTTGTTTGTCCTTT+GGG 0.201844 1_2:-73576627 Msa0091460:three_prime_UTR
AACCATAATAATAATCTATA+TGG 0.209991 1_2:+73585126 None:intergenic
GTTTGCCTCTTTGCAGGTTC+TGG 0.223069 1_2:-73576120 Msa0091460:three_prime_UTR
TCCTCCTGAGCATGTTATTT+TGG 0.223944 1_2:-73583366 Msa0091460:three_prime_UTR
AGTGCCTCAATATATGTTAA+TGG 0.229847 1_2:-73585984 Msa0091460:five_prime_UTR
TGAATTATTGACTAGTCTTT+TGG 0.244276 1_2:-73577050 Msa0091460:three_prime_UTR
TTACCCTTCTATACAGGATA+TGG 0.249114 1_2:-73586113 Msa0091460:five_prime_UTR
CACCAAATTTGTTTGTCCTT+TGG 0.255657 1_2:-73576628 Msa0091460:three_prime_UTR
CTTGTTACAGCTGGATTAAA+TGG 0.255776 1_2:-73579098 Msa0091460:intron
ATTCGTGCGTCATTACTATT+TGG 0.265902 1_2:-73575971 Msa0091460:three_prime_UTR
AAGTACATTTCCTGAGTATA+TGG 0.274640 1_2:-73585044 Msa0091460:five_prime_UTR
GAGGTCTGCTTTCAAGCTTC+TGG 0.275631 1_2:-73576324 Msa0091460:three_prime_UTR
TTGATGGTGAAGATTATAAT+AGG 0.279360 1_2:-73586588 Msa0091460:five_prime_UTR
TGACCCTTGCTTAACAAATA+AGG 0.280576 1_2:+73586260 None:intergenic
TGTGGAGTTTGCCTCTTTGC+AGG 0.288845 1_2:-73576126 Msa0091460:three_prime_UTR
ATGTGGGGAGAGGCGGAAAA+AGG 0.298040 1_2:-73576902 Msa0091460:three_prime_UTR
TGCTTCTTGCACGGGCTTGT+CGG 0.305456 1_2:-73575837 Msa0091460:three_prime_UTR
TCGGCTTATTTAAAGTTAGA+AGG 0.305574 1_2:-73576944 Msa0091460:three_prime_UTR
GTCTCCTCGACTTGTGTAAC+AGG 0.313068 1_2:+73586357 None:intergenic
GTGCCTCAATATATGTTAAT+GGG 0.320497 1_2:-73585983 Msa0091460:five_prime_UTR
ATGCTACTAACTTGTTATTT+GGG 0.325588 1_2:+73583181 None:intergenic
TCCCAAAGGACAAACAAATT+TGG 0.328112 1_2:+73576626 None:intergenic
GAACCAAGCAATTTGAAGAT+AGG 0.342502 1_2:-73583581 Msa0091460:CDS
TGCATAAATGGCAGAAGTGC+TGG 0.347256 1_2:-73581347 Msa0091460:three_prime_UTR
TTCTGAAGTTCAAAGTGGTT+GGG 0.347441 1_2:+73584712 None:intergenic
AGTATATATTTCATCTCCTT+TGG 0.347787 1_2:+73583146 None:intergenic
AGATGGATCATGGAACCTTT+TGG 0.349436 1_2:+73583421 None:intergenic
GGGATTGGCTGATGCTATAT+TGG 0.350372 1_2:-73585963 Msa0091460:five_prime_UTR
CTTTAAATAAGCCGATTTAA+CGG 0.357418 1_2:+73576952 None:intergenic
TTCGTGCGTCATTACTATTT+GGG 0.360950 1_2:-73575970 Msa0091460:three_prime_UTR
GTTCCCATATCCTGTATAGA+AGG 0.363853 1_2:+73586109 None:intergenic
ATTAGATCAAAAGGAGGCTT+TGG 0.364105 1_2:-73577152 Msa0091460:intron
AAGCCTTGATGACTTGAAAC+TGG 0.366111 1_2:+73581543 None:intergenic
TGGCCTGCTGTTTGTGTTGG+TGG 0.367975 1_2:-73576184 Msa0091460:three_prime_UTR
TTACATCGTATATGAGCATT+TGG 0.368832 1_2:-73586166 Msa0091460:five_prime_UTR
AATTTGGCACACAACAATTT+GGG 0.369603 1_2:-73576552 Msa0091460:three_prime_UTR
TTATTGTTAATTATTATTAT+GGG 0.370359 1_2:-73584981 Msa0091460:five_prime_UTR
GTATATCTTTGTAGTGGGAC+TGG 0.372232 1_2:-73576218 Msa0091460:three_prime_UTR
TCCTATTGTTCTCAGGTTCT+CGG 0.373350 1_2:-73582244 Msa0091460:intron
TACATTATCAACAAGGGAAT+AGG 0.376538 1_2:+73579297 None:intergenic
GGCTTGCAGTGGTTGACAAT+GGG 0.376996 1_2:-73586030 Msa0091460:five_prime_UTR
TGAGATAAGAGGAAGGATAA+AGG 0.377073 1_2:-73583550 Msa0091460:CDS
TGCTGTTGCCAGAGTACCTT+TGG 0.379745 1_2:-73581273 Msa0091460:three_prime_UTR
ACAAGGTTACGAAGGGTCTT+TGG 0.384666 1_2:-73576577 Msa0091460:three_prime_UTR
TATATCTTTGTAGTGGGACT+GGG 0.386188 1_2:-73576217 Msa0091460:three_prime_UTR
GGAGAATTTCCCACCTTGTC+AGG 0.392612 1_2:+73583000 None:intergenic
GGCTGTGTTCTTTGCTGAGT+TGG 0.393977 1_2:-73576298 Msa0091460:three_prime_UTR
GCTGTGTTCTTTGCTGAGTT+GGG 0.394627 1_2:-73576297 Msa0091460:three_prime_UTR
AAAATACAATAAGGGGAAAT+CGG 0.394974 1_2:+73575881 None:intergenic
GGGCACATGGTCAGCGAGGG+TGG 0.397123 1_2:-73585172 Msa0091460:five_prime_UTR
GGTTGGGGTTGCCTCGGAGG+AGG 0.397417 1_2:-73577122 Msa0091460:three_prime_UTR
TGTTGTTTAAATGTGAGCTT+GGG 0.399931 1_2:-73578842 Msa0091460:three_prime_UTR
TTTAAATGTGAGCTTGGGGC+TGG 0.402664 1_2:-73578837 Msa0091460:three_prime_UTR
GGCCTGCTGTTTGTGTTGGT+GGG 0.403159 1_2:-73576183 Msa0091460:three_prime_UTR
CAAGCTCATACAAACATTGA+TGG 0.403608 1_2:+73586608 None:intergenic
TGCTGGCCTGCTGTTTGTGT+TGG 0.406809 1_2:-73576187 Msa0091460:three_prime_UTR
ATACGCGGAGGTGGTGAAAT+GGG 0.407509 1_2:-73581481 Msa0091460:three_prime_UTR
GTAAAAGCCGCTAAGCTAAC+CGG 0.417119 1_2:+73586201 None:intergenic
AGAGAATGGTATACATCATA+TGG 0.419101 1_2:+73584922 None:intergenic
GGGAGGCAGTGGTATGAGAA+TGG 0.419208 1_2:-73581460 Msa0091460:three_prime_UTR
GCCTTGACAGATAGTGCCTT+TGG 0.422296 1_2:-73576370 Msa0091460:three_prime_UTR
CCACATATTCTTGTTACAGC+TGG 0.425203 1_2:-73579107 Msa0091460:three_prime_UTR
TATGAGACCAGATTTATTCA+AGG 0.429355 1_2:-73581297 Msa0091460:three_prime_UTR
GGCAGTGAGAGCGGTTTGCT+TGG 0.431888 1_2:-73576349 Msa0091460:three_prime_UTR
GGGAGTGTTGGAGTGATGGT+GGG 0.431997 1_2:-73576607 Msa0091460:three_prime_UTR
CAATGTTTGTATGAGCTTGA+TGG 0.432160 1_2:-73586604 Msa0091460:five_prime_UTR
CTCTCGGAATCGCTCCGATC+CGG 0.432620 1_2:-73584433 Msa0091460:five_prime_UTR
ATCGAGACTCAAGCTGCAAT+TGG 0.433413 1_2:-73583108 Msa0091460:three_prime_UTR
ATTTATGCAAAATCTTTCCT+TGG 0.433872 1_2:+73581361 None:intergenic
CGGAGATACGAAAGCACATC+CGG 0.434645 1_2:+73584414 None:intergenic
GTATAGAAGGGTAATTCCTC+TGG 0.434919 1_2:+73586122 None:intergenic
AAGCCTATCTTCAAATTGCT+TGG 0.435111 1_2:+73583578 None:intergenic
ATTTGGTTGTCAAGCTGATC+CGG 0.436126 1_2:-73586149 Msa0091460:five_prime_UTR
GGAGGTTGGGGTTGCCTCGG+AGG 0.436244 1_2:-73577125 Msa0091460:three_prime_UTR
ACATGCTCAGGAGGAGCATC+AGG 0.440289 1_2:+73583374 None:intergenic
ACAGCAGCCTTGAATAAATC+TGG 0.442080 1_2:+73581290 None:intergenic
TGGGGTGTATTCCGTTAAAT+CGG 0.443008 1_2:-73576963 Msa0091460:three_prime_UTR
GGAAATGTACTTATACCGTT+TGG 0.443471 1_2:+73585055 None:intergenic
AATTGACCTCTGTAGCGAAA+TGG 0.444719 1_2:-73584531 Msa0091460:five_prime_UTR
GTGTAACATCAAACCTTGAA+TGG 0.445714 1_2:-73583071 Msa0091460:three_prime_UTR
GCTTATTAGTGCTTCTTGCA+CGG 0.445805 1_2:-73575846 Msa0091460:three_prime_UTR
TTTGCTTGTGGCCTTTGCTT+AGG 0.447406 1_2:-73576248 Msa0091460:three_prime_UTR
TATACGCGGAGGTGGTGAAA+TGG 0.448082 1_2:-73581482 Msa0091460:three_prime_UTR
GTGGTGAAATGGGGAGGCAG+TGG 0.448275 1_2:-73581471 Msa0091460:three_prime_UTR
ACATTGAATTAAACACTTGA+AGG 0.449237 1_2:-73584490 Msa0091460:five_prime_UTR
AAAGCAAGATTATCTCTAGT+TGG 0.449717 1_2:+73576800 None:intergenic
TGGCCTTTGCTTAGGCGTGC+TGG 0.450489 1_2:-73576240 Msa0091460:three_prime_UTR
AGCCCACCAACACAAACAGC+AGG 0.451159 1_2:+73576181 None:intergenic
AACACCTTATTTGTTAAGCA+AGG 0.454528 1_2:-73586264 Msa0091460:five_prime_UTR
CGATGAAGTACATTAAATTC+AGG 0.458156 1_2:+73585084 None:intergenic
CTTTGGGAGTGTTGGAGTGA+TGG 0.460861 1_2:-73576611 Msa0091460:three_prime_UTR
CATTTGAAAACAGTTGAGAA+TGG 0.460881 1_2:-73586540 Msa0091460:five_prime_UTR
GGGTAATTCCTCTGGACCTC+CGG 0.461251 1_2:+73586130 None:intergenic
TTTCTGAAGTTCAAAGTGGT+TGG 0.461643 1_2:+73584711 None:intergenic
CCGTCAAAAGTGATAGCCTT+TGG 0.462232 1_2:-73576848 Msa0091460:three_prime_UTR
GAAGTAGTGAGAGGAATAGT+TGG 0.463287 1_2:+73581224 None:intergenic
GAGGAATTACCCTTCTATAC+AGG 0.463426 1_2:-73586119 Msa0091460:five_prime_UTR
ATACATACACTTGCTCTGCC+TGG 0.465445 1_2:-73584647 Msa0091460:five_prime_UTR
CTTATTAGTGCTTCTTGCAC+GGG 0.466895 1_2:-73575845 Msa0091460:three_prime_UTR
GTGTTGGAGTGATGGTGGGA+GGG 0.471808 1_2:-73576603 Msa0091460:three_prime_UTR
CTATACCTCAATGTTTGTGT+GGG 0.473236 1_2:+73586515 None:intergenic
AAGTAGAATTCCTCCTTCCT+AGG 0.474833 1_2:+73579331 None:intergenic
TGTTTGTCCTTTGGGAGTGT+TGG 0.474932 1_2:-73576619 Msa0091460:three_prime_UTR
GTTCGAGCCTGGTGATTGTA+TGG 0.477195 1_2:-73575907 Msa0091460:three_prime_UTR
AGTGTTGGAGTGATGGTGGG+AGG 0.477524 1_2:-73576604 Msa0091460:three_prime_UTR
GATTGTGCAGCAGCTGCTGC+GGG 0.478944 1_2:-73576275 Msa0091460:three_prime_UTR
CCAGCTGTAACAAGAATATG+TGG 0.480307 1_2:+73579107 None:intergenic
TGAGAATATGTGGAAGAGCC+CGG 0.480449 1_2:-73576873 Msa0091460:three_prime_UTR
TGTTTACTATTTAGTTATCC+AGG 0.480620 1_2:+73584623 None:intergenic
AGATCAAAAGGAGGCTTTGG+TGG 0.480785 1_2:-73577149 Msa0091460:three_prime_UTR
GCATAAATGGCAGAAGTGCT+GGG 0.480811 1_2:-73581346 Msa0091460:three_prime_UTR
TCAATATATGTTAATGGGAT+TGG 0.482479 1_2:-73585978 Msa0091460:five_prime_UTR
CAAAGTTCGTGGCAAAATTG+AGG 0.482652 1_2:-73578890 Msa0091460:three_prime_UTR
GCATTGTGACGTTGCGCACT+TGG 0.483068 1_2:-73576696 Msa0091460:three_prime_UTR
CTATACCTCAATGTTTGCGT+GGG 0.483116 1_2:-73586652 Msa0091460:five_prime_UTR
ATCTGTCAAGGCAATATGTC+GGG 0.483660 1_2:+73576381 None:intergenic
CTGTTGTTTAAATGTGAGCT+TGG 0.484448 1_2:-73578843 Msa0091460:three_prime_UTR
TGATGGTGGGAGGGTGAACA+AGG 0.485024 1_2:-73576594 Msa0091460:three_prime_UTR
CTCTAGTTGGAGCTCTATTG+AGG 0.485641 1_2:+73576813 None:intergenic
CCATTACTACTTTATGGCTA+CGG 0.485771 1_2:-73582103 Msa0091460:three_prime_UTR
CAACAAAACATGAAAAGCTT+GGG 0.485788 1_2:-73585905 Msa0091460:five_prime_UTR
GATCAAAAGGAGGCTTTGGT+GGG 0.486157 1_2:-73577148 Msa0091460:three_prime_UTR
TCAACAAAACATGAAAAGCT+TGG 0.487172 1_2:-73585906 Msa0091460:five_prime_UTR
TGGGAGTGTTGGAGTGATGG+TGG 0.487332 1_2:-73576608 Msa0091460:three_prime_UTR
TCATCCAAAATAACATGCTC+AGG 0.488078 1_2:+73583362 None:intergenic
GTGTAATAGGTACGAAGAAA+CGG 0.491203 1_2:-73576735 Msa0091460:three_prime_UTR
ACCATAATAATAATCTATAT+GGG 0.491507 1_2:+73585127 None:intergenic
CATTACTACTTTATGGCTAC+GGG 0.491993 1_2:-73582102 Msa0091460:three_prime_UTR
CTATTTAGTTATCCAGGTCC+AGG 0.493805 1_2:+73584629 None:intergenic
TCTGAAGTTCAAAGTGGTTG+GGG 0.494195 1_2:+73584713 None:intergenic
TCAATGCTTTACAGATCCAT+TGG 0.496202 1_2:-73586240 Msa0091460:five_prime_UTR
TGCCAACAGAGGCCTTGTTA+AGG 0.496353 1_2:+73586415 None:intergenic
TTCTGAACCTGCAAAGTTCG+TGG 0.496672 1_2:-73578901 Msa0091460:three_prime_UTR
AAAGAGAATGAAGTAGAGAA+TGG 0.499211 1_2:+73584908 None:intergenic
TCTATACAGGATATGGGAAC+TGG 0.499544 1_2:-73586106 Msa0091460:five_prime_UTR
ACACAAAACGTCGACCCTTC+CGG 0.501542 1_2:+73576761 None:intergenic
GGAGGCAGTGGTATGAGAAT+GGG 0.502337 1_2:-73581459 Msa0091460:three_prime_UTR
CCGTAGCCATAAAGTAGTAA+TGG 0.504218 1_2:+73582103 None:intergenic
TGTAGGAATGGGGTGATCCT+AGG 0.505042 1_2:-73579348 Msa0091460:intron
CATCACCACCAGCCCATTCA+AGG 0.505524 1_2:+73583058 None:intergenic
TGATGGTGAAGATTATAATA+GGG 0.505632 1_2:-73586587 Msa0091460:five_prime_UTR
AAAGTTCGTGGCAAAATTGA+GGG 0.507662 1_2:-73578889 Msa0091460:three_prime_UTR
TACCCTTCTATACAGGATAT+GGG 0.509071 1_2:-73586112 Msa0091460:five_prime_UTR
ACACTTGCTCTGCCTGGACC+TGG 0.509372 1_2:-73584641 Msa0091460:five_prime_UTR
AGTACATTTCCTGAGTATAT+GGG 0.509900 1_2:-73585043 Msa0091460:five_prime_UTR
GGAAAATGCTTACACCGATT+CGG 0.512108 1_2:-73584388 Msa0091460:five_prime_UTR
TAAAAGCCGCTAAGCTAACC+GGG 0.512391 1_2:+73586202 None:intergenic
CTCCCAGTTTCAAGTCATCA+AGG 0.514009 1_2:-73581546 Msa0091460:three_prime_UTR
TACACCGATTCGGTCATGTC+AGG 0.514534 1_2:-73584378 Msa0091460:intron
CAATGCTTTACAGATCCATT+GGG 0.516707 1_2:-73586239 Msa0091460:five_prime_UTR
TTCCTCTCACTACTTCCGAC+TGG 0.517796 1_2:-73581217 Msa0091460:three_prime_UTR
ATGCGGTTGATGAGTGGAGA+TGG 0.521191 1_2:-73577000 Msa0091460:three_prime_UTR
CTTCTTTCATCGAGAAGCAT+AGG 0.521261 1_2:-73586051 Msa0091460:five_prime_UTR
AATTGACTCACCATTGCGCT+CGG 0.524787 1_2:+73586288 None:intergenic
TGTGTTGAGTGAGGATATGT+GGG 0.525043 1_2:-73576918 Msa0091460:three_prime_UTR
TGAGGATATGTGGGGAGAGG+CGG 0.526291 1_2:-73576909 Msa0091460:three_prime_UTR
GTTAATGACACCATGCCTAC+AGG 0.526408 1_2:-73583398 Msa0091460:three_prime_UTR
ATAAACGTAGCAACAAAGAA+AGG 0.526512 1_2:+73586312 None:intergenic
CAAAGGACAAACAAATTTGG+TGG 0.526540 1_2:+73576629 None:intergenic
ACTTCATCGTCGTTGCCAAA+CGG 0.526768 1_2:-73585070 Msa0091460:five_prime_UTR
CAAAAGTGATAGCCTTTGGT+TGG 0.528927 1_2:-73576844 Msa0091460:three_prime_UTR
GCAAGAAGCACTAATAAGCT+CGG 0.529486 1_2:+73575850 None:intergenic
TCAAAAGGAGGCTTTGGTGG+GGG 0.529640 1_2:-73577146 Msa0091460:three_prime_UTR
TTGTGTTGAGTGAGGATATG+TGG 0.530359 1_2:-73576919 Msa0091460:three_prime_UTR
CAATTTCACATGTAACATCA+AGG 0.531389 1_2:-73585193 Msa0091460:five_prime_UTR
GTTGAAGCTTATGCTATGGT+TGG 0.531692 1_2:-73576669 Msa0091460:three_prime_UTR
TGTCATTAACAGATGGATCA+TGG 0.532115 1_2:+73583411 None:intergenic
TGCGGTTGATGAGTGGAGAT+GGG 0.532138 1_2:-73576999 Msa0091460:three_prime_UTR
TCTATACCTCAATGTTTGTG+TGG 0.532701 1_2:+73586514 None:intergenic
GATACCTGACATGACCGAAT+CGG 0.533607 1_2:+73584374 None:intergenic
AACATCCACCAAAGGTACTC+TGG 0.534806 1_2:+73581265 None:intergenic
GGCACATGGTCAGCGAGGGT+GGG 0.535027 1_2:-73585171 Msa0091460:five_prime_UTR
AATATATACTGTTTATGTCA+TGG 0.538740 1_2:-73583133 Msa0091460:three_prime_UTR
GCTGCGGGTGTGTTTGCTTG+TGG 0.540566 1_2:-73576260 Msa0091460:three_prime_UTR
TTCCTTAACAAGGCCTCTGT+TGG 0.541657 1_2:-73586417 Msa0091460:five_prime_UTR
TGTAACATCAAACCTTGAAT+GGG 0.542086 1_2:-73583070 Msa0091460:three_prime_UTR
ATTGATGGAAGGGGAAATTG+AGG 0.543133 1_2:+73586623 None:intergenic
TGTGCTTTCGTATCTCCGTC+AGG 0.543559 1_2:-73584409 Msa0091460:five_prime_UTR
ACACCTTATTTGTTAAGCAA+GGG 0.543939 1_2:-73586263 Msa0091460:five_prime_UTR
CATTTAACATGATGATTACG+TGG 0.544157 1_2:+73586074 None:intergenic
GTGCTGGTATATCTTTGTAG+TGG 0.545197 1_2:-73576224 Msa0091460:three_prime_UTR
AGAAGGAATTGTGTTGAGTG+AGG 0.545716 1_2:-73576927 Msa0091460:three_prime_UTR
TCTATACCTCAATGTTTGCG+TGG 0.546181 1_2:-73586653 Msa0091460:five_prime_UTR
TAATACGACCCTTTGCGTAC+AGG 0.547949 1_2:+73583510 None:intergenic
TTCAAGGTTTGATGTTACAC+TGG 0.548154 1_2:+73583074 None:intergenic
CCGTATATCCGATAACCAAA+AGG 0.550075 1_2:-73583436 Msa0091460:CDS
TGCTGGTATATCTTTGTAGT+GGG 0.551530 1_2:-73576223 Msa0091460:three_prime_UTR
TACGTTTATTCCGAGCGCAA+TGG 0.553312 1_2:-73586298 Msa0091460:five_prime_UTR
AGCTGCTATCATGATGAGCA+TGG 0.553648 1_2:-73584749 Msa0091460:five_prime_UTR
CACCAAAACAAAATAAAACT+AGG 0.554452 1_2:+73576042 None:intergenic
CTTTATGGCTACGGGTCTTG+AGG 0.555022 1_2:-73582094 Msa0091460:intron
GAGAGCGGTTTGCTTGGCTG+AGG 0.556040 1_2:-73576343 Msa0091460:three_prime_UTR
GAGTGAGGATATGTGGGGAG+AGG 0.556416 1_2:-73576912 Msa0091460:three_prime_UTR
GGATTGTGCAGCAGCTGCTG+CGG 0.556840 1_2:-73576276 Msa0091460:three_prime_UTR
TATACACAATCAATGAATGT+TGG 0.561728 1_2:-73586683 Msa0091460:five_prime_UTR
AAAGATCTTGTGAAGCTCGA+TGG 0.561830 1_2:-73582133 Msa0091460:three_prime_UTR
TGTTGCCAGAGTACCTTTGG+TGG 0.562757 1_2:-73581270 Msa0091460:three_prime_UTR
AGGCTTGCAGTGGTTGACAA+TGG 0.563111 1_2:-73586031 Msa0091460:five_prime_UTR
AGCATCAGGTCCTGTAGGCA+TGG 0.564851 1_2:+73583388 None:intergenic
TCATACAAACATTGATGGAA+GGG 0.565420 1_2:+73586613 None:intergenic
TATACACAATCAATCAATGT+TGG 0.566410 1_2:+73586483 None:intergenic
CTCATACAAACATTGATGGA+AGG 0.567783 1_2:+73586612 None:intergenic
CAGTGGGCACATGCTTCAGA+TGG 0.568505 1_2:-73582187 Msa0091460:three_prime_UTR
CAAGAAGCACTAATAAGCTC+GGG 0.570287 1_2:+73575851 None:intergenic
ATACGAAAGCACATCCGGAT+CGG 0.570441 1_2:+73584419 None:intergenic
ATCAAAAGGAGGCTTTGGTG+GGG 0.570574 1_2:-73577147 Msa0091460:three_prime_UTR
TAAATATAGCCCATATACTC+AGG 0.570656 1_2:+73585034 None:intergenic
TCCTCTCACTACTTCCGACT+GGG 0.571133 1_2:-73581216 Msa0091460:three_prime_UTR
CATAAATGGCAGAAGTGCTG+GGG 0.572685 1_2:-73581345 Msa0091460:three_prime_UTR
AATCCCATTAACATATATTG+AGG 0.572729 1_2:+73585980 None:intergenic
CGTGGAGGTGGCTGTTGGAA+AGG 0.573346 1_2:-73576445 Msa0091460:three_prime_UTR
TTAAAGTGTTGTCGTGGAGG+TGG 0.574198 1_2:-73576457 Msa0091460:three_prime_UTR
TGTTCTTACATTATCAACAA+GGG 0.574837 1_2:+73579291 None:intergenic
TAACTGCACCTGTACGCAAA+GGG 0.575768 1_2:-73583518 Msa0091460:CDS
TGTGGTTGAAGCTTATGCTA+TGG 0.578580 1_2:-73576673 Msa0091460:three_prime_UTR
CAACAAAATACGTCACTGAA+AGG 0.580218 1_2:-73582210 Msa0091460:three_prime_UTR
TGGGAACTTTACCATTCCCC+CGG 0.582001 1_2:-73586220 Msa0091460:five_prime_UTR
GATGATGTACTTATAAAACT+TGG 0.583947 1_2:+73584877 None:intergenic
ATAGCTCATATACGCGGAGG+TGG 0.584461 1_2:-73581490 Msa0091460:three_prime_UTR
TGCTCTAGTTTATGTAACAA+TGG 0.586588 1_2:-73583037 Msa0091460:three_prime_UTR
AGATTAAAGTGTTGTCGTGG+AGG 0.587326 1_2:-73576460 Msa0091460:three_prime_UTR
AATACGTCACTGAAAGGCAG+TGG 0.587769 1_2:-73582204 Msa0091460:three_prime_UTR
ATATCTTTGTAGTGGGACTG+GGG 0.588305 1_2:-73576216 Msa0091460:three_prime_UTR
TTGTTCTTACATTATCAACA+AGG 0.588588 1_2:+73579290 None:intergenic
GTTGTCGTGGAGGTGGCTGT+TGG 0.588875 1_2:-73576450 Msa0091460:three_prime_UTR
TTCCCATATCCTGTATAGAA+GGG 0.591921 1_2:+73586110 None:intergenic
AGGCTTTCATTGTTAGATCG+AGG 0.595178 1_2:-73581526 Msa0091460:three_prime_UTR
AAGCTGATCCGGAGGTCCAG+AGG 0.598077 1_2:-73586138 Msa0091460:five_prime_UTR
GGAATGGGGTGATCCTAGGA+AGG 0.598189 1_2:-73579344 Msa0091460:three_prime_UTR
ATTGGCTGATGCTATATTGG+AGG 0.600727 1_2:-73585960 Msa0091460:five_prime_UTR
ACATCAAACCTTGAATGGGC+TGG 0.602081 1_2:-73583066 Msa0091460:three_prime_UTR
CCTCGGAGGAGGATGTGAGT+TGG 0.602330 1_2:-73577111 Msa0091460:three_prime_UTR
CATACAAACATTGATGGAAG+GGG 0.602665 1_2:+73586614 None:intergenic
TATCTGTCAAGGCAATATGT+CGG 0.603195 1_2:+73576380 None:intergenic
GATAAGAGGAAGGATAAAGG+AGG 0.605118 1_2:-73583547 Msa0091460:CDS
CTTATGTTACTGTAGGAATG+GGG 0.605360 1_2:-73579358 Msa0091460:intron
GGAGGAGCATCAGGTCCTGT+AGG 0.606439 1_2:+73583383 None:intergenic
AGTGCCTTTGGCAGTGAGAG+CGG 0.607504 1_2:-73576358 Msa0091460:three_prime_UTR
TTTAAGGAACGTGTTACCAC+CGG 0.608729 1_2:-73576780 Msa0091460:three_prime_UTR
TACGCGGAGGTGGTGAAATG+GGG 0.610390 1_2:-73581480 Msa0091460:three_prime_UTR
GGCATGGTGTCATTAACAGA+TGG 0.610896 1_2:+73583404 None:intergenic
CATGTAACATCAAGGGCACA+TGG 0.611313 1_2:-73585185 Msa0091460:five_prime_UTR
CAGCACGAATACTACAGTAT+CGG 0.612278 1_2:-73583323 Msa0091460:three_prime_UTR
GCGGTTGATGAGTGGAGATG+GGG 0.612316 1_2:-73576998 Msa0091460:three_prime_UTR
GCCAAAGGCACTATCTGTCA+AGG 0.613076 1_2:+73576369 None:intergenic
GCTTGCAGTGGTTGACAATG+GGG 0.614542 1_2:-73586029 Msa0091460:five_prime_UTR
CAAGGGCACATGGTCAGCGA+GGG 0.614941 1_2:-73585175 Msa0091460:five_prime_UTR
CAAACCGCTCTCACTGCCAA+AGG 0.615998 1_2:+73576354 None:intergenic
TGTCAAATGCGGTTGATGAG+TGG 0.616791 1_2:-73577006 Msa0091460:three_prime_UTR
TGAACCCCACGCAAACATTG+AGG 0.621538 1_2:+73586647 None:intergenic
TTTGATGTTACACTGGCAAG+AGG 0.621915 1_2:+73583081 None:intergenic
GGGAATGGTAAAGTTCCCAA+TGG 0.622641 1_2:+73586224 None:intergenic
AGCGTCAGTGCTATCAGCAT+AGG 0.625364 1_2:-73576069 Msa0091460:three_prime_UTR
TCGGTTGCCATACAATCACC+AGG 0.626179 1_2:+73575900 None:intergenic
AAAGAAATTTACCTCCCAGT+CGG 0.627238 1_2:+73581202 None:intergenic
GAAGCACTAATAAGCTCGGG+TGG 0.628223 1_2:+73575854 None:intergenic
ATAACTGCACCTGTACGCAA+AGG 0.628634 1_2:-73583519 Msa0091460:CDS
ATACCAGCACGCCTAAGCAA+AGG 0.629983 1_2:+73576237 None:intergenic
GTGACGTTGCGCACTTGGTG+TGG 0.631271 1_2:-73576691 Msa0091460:three_prime_UTR
CATCACTCCAACACTCCCAA+AGG 0.631787 1_2:+73576612 None:intergenic
TATACCTCAATGTTTGTGTG+GGG 0.632583 1_2:+73586516 None:intergenic
AATTTCACATGTAACATCAA+GGG 0.633025 1_2:-73585192 Msa0091460:five_prime_UTR
AGCCTTGATGACTTGAAACT+GGG 0.633541 1_2:+73581544 None:intergenic
AAGAGATTAAAGTGTTGTCG+TGG 0.637110 1_2:-73576463 Msa0091460:three_prime_UTR
GAGGGTGAACAAGGTTACGA+AGG 0.638010 1_2:-73576585 Msa0091460:three_prime_UTR
GCGGAGGTGGTGAAATGGGG+AGG 0.638605 1_2:-73581477 Msa0091460:three_prime_UTR
CTTGCAGTGGTTGACAATGG+GGG 0.638890 1_2:-73586028 Msa0091460:five_prime_UTR
TAAAACCAGAACCTGCAAAG+AGG 0.641379 1_2:+73576115 None:intergenic
CGAGAAGCATAGGCTTGCAG+TGG 0.641590 1_2:-73586041 Msa0091460:five_prime_UTR
ATGTCCTGTTACACAAGTCG+AGG 0.641597 1_2:-73586361 Msa0091460:five_prime_UTR
CTGCTTTCAAGCTTCTGGTG+CGG 0.644358 1_2:-73576319 Msa0091460:three_prime_UTR
TCCAAAATAACATGCTCAGG+AGG 0.646141 1_2:+73583365 None:intergenic
TGGACCCCACACAAACATTG+AGG 0.646609 1_2:-73586520 Msa0091460:five_prime_UTR
TATACCTCAATGTTTGCGTG+GGG 0.647565 1_2:-73586651 Msa0091460:five_prime_UTR
TAATATTCTTAGACCTGACA+AGG 0.648307 1_2:-73583013 Msa0091460:intron
ATACGTCACTGAAAGGCAGT+GGG 0.650078 1_2:-73582203 Msa0091460:three_prime_UTR
GAGGAGAACTCTCCAACCAA+AGG 0.650302 1_2:+73576832 None:intergenic
TCAAGGGCACATGGTCAGCG+AGG 0.650707 1_2:-73585176 Msa0091460:five_prime_UTR
GTGGATCCATTTCGCTACAG+AGG 0.651912 1_2:+73584525 None:intergenic
TACGATGTAATAAACCAGCA+TGG 0.652863 1_2:+73586179 None:intergenic
ACTTGACCACGTGCCAACAG+AGG 0.652877 1_2:+73586404 None:intergenic
GCATATGCAGAAGACACCAA+AGG 0.654059 1_2:-73583162 Msa0091460:three_prime_UTR
CACTCATAGAAAAGACAACA+CGG 0.655091 1_2:+73576413 None:intergenic
TGTTTAATTAGATCAAAAGG+AGG 0.655285 1_2:-73577158 Msa0091460:intron
AACAGGACATAATGACAACT+CGG 0.655371 1_2:+73586374 None:intergenic
TCCCAGTCGGAAGTAGTGAG+AGG 0.656613 1_2:+73581215 None:intergenic
GTTGTTTAAATGTGAGCTTG+GGG 0.656860 1_2:-73578841 Msa0091460:three_prime_UTR
AGGAACGTGTTACCACCGGA+AGG 0.657574 1_2:-73576776 Msa0091460:three_prime_UTR
ACAAGGCCTCTGTTGGCACG+TGG 0.657821 1_2:-73586410 Msa0091460:five_prime_UTR
TGGTTGTCAAGCTGATCCGG+AGG 0.658797 1_2:-73586146 Msa0091460:five_prime_UTR
ATGCAACAACTTCCTTAACA+AGG 0.663413 1_2:-73586427 Msa0091460:five_prime_UTR
CGGTTGATGAGTGGAGATGG+GGG 0.663589 1_2:-73576997 Msa0091460:three_prime_UTR
GGTTCAGAATACAAAACACG+TGG 0.664416 1_2:+73578915 None:intergenic
TATTGTTCTCAGGTTCTCGG+AGG 0.667662 1_2:-73582241 Msa0091460:intron
AGGGTGAACAAGGTTACGAA+GGG 0.668774 1_2:-73576584 Msa0091460:three_prime_UTR
GGAACGTGTTACCACCGGAA+GGG 0.674174 1_2:-73576775 Msa0091460:three_prime_UTR
CAGCTGTAACAAGAATATGT+GGG 0.675217 1_2:+73579108 None:intergenic
ATGGGGTGATCCTAGGAAGG+AGG 0.677198 1_2:-73579341 Msa0091460:three_prime_UTR
CAAAACGTCGACCCTTCCGG+TGG 0.677607 1_2:+73576764 None:intergenic
TCAAACCTTGAATGGGCTGG+TGG 0.679492 1_2:-73583063 Msa0091460:three_prime_UTR
GGATAACTAAATAGTAAACA+CGG 0.685161 1_2:-73584620 Msa0091460:five_prime_UTR
GTTGTCACAACATCCACCAA+AGG 0.686944 1_2:+73581257 None:intergenic
GTTATAGCTCATATACGCGG+AGG 0.697147 1_2:-73581493 Msa0091460:three_prime_UTR
ATAAATGGCAGAAGTGCTGG+GGG 0.697795 1_2:-73581344 Msa0091460:three_prime_UTR
TCTCACTACTTCCGACTGGG+AGG 0.702049 1_2:-73581213 Msa0091460:intron
CCAACTCACATCCTCCTCCG+AGG 0.706748 1_2:+73577111 None:intergenic
AAAAGCCGCTAAGCTAACCG+GGG 0.709527 1_2:+73586203 None:intergenic
ACAATGCAATAAGAGATGAG+TGG 0.732180 1_2:+73576712 None:intergenic
AAAGCCGCTAAGCTAACCGG+GGG 0.738402 1_2:+73586204 None:intergenic
TATGTTATAGCTCATATACG+CGG 0.752567 1_2:-73581496 Msa0091460:three_prime_UTR
GTTCAGAATACAAAACACGT+GGG 0.759019 1_2:+73578916 None:intergenic
GGGTATGAGATTGTCAAATG+CGG 0.766796 1_2:-73577017 Msa0091460:three_prime_UTR
GTGTTGAGTGAGGATATGTG+GGG 0.783553 1_2:-73576917 Msa0091460:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTATATTAATTTTTT+TGG + chr1_2:73582008-73582027 None:intergenic 0.0%
!!! AAAAAATATATTTTGCATTT+TGG + chr1_2:73576850-73576869 None:intergenic 10.0%
!!! AGTATTAATATTTATTTTTG+CGG - chr1_2:73577108-73577127 Msa0091460:three_prime_UTR 10.0%
!! CTAAAATCTAATAATAAAAT+TGG - chr1_2:73577724-73577743 Msa0091460:intron 10.0%
!!! TTAAAATTTTATTTCTTTTC+AGG - chr1_2:73579334-73579353 Msa0091460:three_prime_UTR 10.0%
!!! AATTTAATGATATCAATTTT+TGG + chr1_2:73580157-73580176 None:intergenic 10.0%
!!! TGTGTTTTATTTTATATAAA+GGG + chr1_2:73581861-73581880 None:intergenic 10.0%
!!! TTGTGTTTTATTTTATATAA+AGG + chr1_2:73581862-73581881 None:intergenic 10.0%
!!! TTTTTTTTAAGAAATTCTAT+AGG - chr1_2:73582258-73582277 Msa0091460:intron 10.0%
!!! ATATAATTTAAAATGCTTTA+AGG - chr1_2:73584386-73584405 Msa0091460:five_prime_UTR 10.0%
!!! ATTGATTTATTTTATATCAA+TGG - chr1_2:73585172-73585191 Msa0091460:five_prime_UTR 10.0%
!! ATATTAATATTACACAAACA+CGG - chr1_2:73576906-73576925 Msa0091460:three_prime_UTR 15.0%
!! ACCATAATAATAATCTATAT+GGG + chr1_2:73577418-73577437 None:intergenic 15.0%
!! AACCATAATAATAATCTATA+TGG + chr1_2:73577419-73577438 None:intergenic 15.0%
!! TCGAAAAATAATAATGAAAT+TGG + chr1_2:73577751-73577770 None:intergenic 15.0%
!!! GAATTGTTTTATTTAAAGAA+GGG - chr1_2:73577858-73577877 Msa0091460:intron 15.0%
!!! AATTGTTTTATTTAAAGAAG+GGG - chr1_2:73577859-73577878 Msa0091460:intron 15.0%
!! TTTAGAAAAACTATAACAAA+CGG - chr1_2:73578655-73578674 Msa0091460:intron 15.0%
!! TTACTATTATACGAAAAATT+TGG - chr1_2:73579052-73579071 Msa0091460:intron 15.0%
!!! TTTTCAATTTCAATTTGTTT+AGG - chr1_2:73579799-73579818 Msa0091460:intron 15.0%
!!! ATCCATATTTATATTACTTT+TGG - chr1_2:73580694-73580713 Msa0091460:intron 15.0%
!!! TTTTATATAAAGGGTAAATT+TGG + chr1_2:73581852-73581871 None:intergenic 15.0%
!!! TAATTTTTTTGGAAACAAAT+TGG + chr1_2:73581997-73582016 None:intergenic 15.0%
!! TAAAACATTCTATTATTTAG+TGG - chr1_2:73583518-73583537 Msa0091460:CDS 15.0%
!!! TTTTAAACTTGTTTAGTATT+TGG - chr1_2:73583775-73583794 Msa0091460:intron 15.0%
!!! TTTAAACTTGTTTAGTATTT+GGG - chr1_2:73583776-73583795 Msa0091460:intron 15.0%
!!! TGAAAATTTTAGTTTAATGA+AGG - chr1_2:73583851-73583870 Msa0091460:intron 15.0%
!! AAATATATGCATAAATTAAG+AGG - chr1_2:73584472-73584491 Msa0091460:five_prime_UTR 15.0%
!! TAGTAAAATGAGAAAATTAA+CGG - chr1_2:73585097-73585116 Msa0091460:five_prime_UTR 15.0%
!!! TTTTGTTTAATTAGATCAAA+AGG - chr1_2:73585381-73585400 Msa0091460:intron 15.0%
!!! ATGTGATTTTTATTTTGGAT+CGG + chr1_2:73576739-73576758 None:intergenic 20.0%
!!! TAATATTTATTTTTGCGGTT+CGG - chr1_2:73577113-73577132 Msa0091460:three_prime_UTR 20.0%
!! TCCCATATAGATTATTATTA+TGG - chr1_2:73577414-73577433 Msa0091460:intron 20.0%
!!! GGAATTGTTTTATTTAAAGA+AGG - chr1_2:73577857-73577876 Msa0091460:intron 20.0%
!!! GACTCATAATTGAATTTTTA+CGG - chr1_2:73578086-73578105 Msa0091460:intron 20.0%
!! AAACAGATTATTAAAACCAT+TGG + chr1_2:73578425-73578444 None:intergenic 20.0%
!! TTAGAAAAACTATAACAAAC+GGG - chr1_2:73578656-73578675 Msa0091460:intron 20.0%
!!! ATACACATTTTTCATTTTCT+AGG - chr1_2:73578939-73578958 Msa0091460:intron 20.0%
!! TATTATACGAAAAATTTGGA+AGG - chr1_2:73579056-73579075 Msa0091460:intron 20.0%
!! ATTATACGAAAAATTTGGAA+GGG - chr1_2:73579057-73579076 Msa0091460:intron 20.0%
!! TTAGATCATATCATTATCAT+GGG - chr1_2:73579253-73579272 Msa0091460:intron 20.0%
!! AATATATACTGTTTATGTCA+TGG - chr1_2:73579409-73579428 Msa0091460:intron 20.0%
!!! TGTTAAAAAAGTTGATAAGA+TGG + chr1_2:73579688-73579707 None:intergenic 20.0%
!!! AATTAGGTTCTAATTCAATT+CGG + chr1_2:73579836-73579855 None:intergenic 20.0%
!! AGCCAAAAGTAATATAAATA+TGG + chr1_2:73580699-73580718 None:intergenic 20.0%
!! GAAAATCAGAAATCTATTAA+TGG + chr1_2:73580735-73580754 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG + chr1_2:73580941-73580960 None:intergenic 20.0%
!!! TTTGAATCATTTTCATATGT+TGG + chr1_2:73581387-73581406 None:intergenic 20.0%
!!! ATTTTATAACTTGTAAGAGA+AGG - chr1_2:73581652-73581671 Msa0091460:intron 20.0%
!! AAAAAAATAAGGAAGGTTAA+AGG + chr1_2:73581719-73581738 None:intergenic 20.0%
!! AAAATCAATTAAAACTAGAG+AGG + chr1_2:73581763-73581782 None:intergenic 20.0%
!!! GTAATGTTTTAACATTCTAT+TGG - chr1_2:73582225-73582244 Msa0091460:three_prime_UTR 20.0%
!!! TTTTTAAGAAATTCTATAGG+AGG - chr1_2:73582261-73582280 Msa0091460:intron 20.0%
!! TATATAATCTAAGTTTGATC+TGG + chr1_2:73582297-73582316 None:intergenic 20.0%
!! TTACATTTCCGAAAATTATT+CGG + chr1_2:73582430-73582449 None:intergenic 20.0%
!!! TGAGTTTTCCAAAAAAAATT+CGG - chr1_2:73582453-73582472 Msa0091460:intron 20.0%
!! AAAATTTAGAAATACATACC+TGG - chr1_2:73582495-73582514 Msa0091460:intron 20.0%
!!! TGGAATTTTAAAAGATTTGT+AGG - chr1_2:73582619-73582638 Msa0091460:intron 20.0%
!!! GGAATTTTAAAAGATTTGTA+GGG - chr1_2:73582620-73582639 Msa0091460:intron 20.0%
!!! GAATTTTAAAAGATTTGTAG+GGG - chr1_2:73582621-73582640 Msa0091460:intron 20.0%
!! ACTCAGTTTATTTATCAATT+TGG + chr1_2:73582764-73582783 None:intergenic 20.0%
!! AAATCATGTTGAAATTGTTT+CGG + chr1_2:73582860-73582879 None:intergenic 20.0%
!!! AATTTGTTTGTCTTTTAAAC+TGG - chr1_2:73582982-73583001 Msa0091460:intron 20.0%
!! ACAAGTTTAAAAACAAACAA+CGG + chr1_2:73583767-73583786 None:intergenic 20.0%
!!! TTAAACTTGTTTAGTATTTG+GGG - chr1_2:73583777-73583796 Msa0091460:intron 20.0%
!!! AATATTTTTAGTCTGACATA+CGG - chr1_2:73584324-73584343 Msa0091460:intron 20.0%
!!! TAAGAGGTTTACATTTTTTA+CGG - chr1_2:73584488-73584507 Msa0091460:five_prime_UTR 20.0%
!! GTAAAATTATGCACTAATAA+CGG - chr1_2:73584679-73584698 Msa0091460:five_prime_UTR 20.0%
!!! TCTCAAATTTCTTATTTAGT+CGG - chr1_2:73584709-73584728 Msa0091460:five_prime_UTR 20.0%
!! CTCCAAATAAAATACAAATA+AGG - chr1_2:73584783-73584802 Msa0091460:five_prime_UTR 20.0%
!!! CACCTTATTTGTATTTTATT+TGG + chr1_2:73584788-73584807 None:intergenic 20.0%
!! CAAATAAAATACAAATAAGG+TGG - chr1_2:73584786-73584805 Msa0091460:five_prime_UTR 20.0%
!!! CAACATTTTATGATAGAAAA+AGG - chr1_2:73584889-73584908 Msa0091460:five_prime_UTR 20.0%
!! ACAATAGCAAAATAAGAAAA+AGG + chr1_2:73584958-73584977 None:intergenic 20.0%
!!! TTTTTCTTATTTTGCTATTG+TGG - chr1_2:73584957-73584976 Msa0091460:five_prime_UTR 20.0%
!! AATAAAAGTTGCAATCAAAT+AGG + chr1_2:73584984-73585003 None:intergenic 20.0%
!! ACAAAACAAAAAAACTAGTT+TGG - chr1_2:73585046-73585065 Msa0091460:five_prime_UTR 20.0%
!! TTAAAAAGGAAAAGAGAAAT+AGG + chr1_2:73585207-73585226 None:intergenic 20.0%
!!! ATTTCTCTTTTCCTTTTTAA+TGG - chr1_2:73585207-73585226 Msa0091460:five_prime_UTR 20.0%
!! ATATTGAGAAAAAGAAAAAG+CGG - chr1_2:73585294-73585313 Msa0091460:intron 20.0%
!! TGGAAAAAAAATACAATAAG+GGG + chr1_2:73586671-73586690 None:intergenic 20.0%
!! GTGGAAAAAAAATACAATAA+GGG + chr1_2:73586672-73586691 None:intergenic 20.0%
! TATACACAATCAATGAATGT+TGG - chr1_2:73575859-73575878 Msa0091460:three_prime_UTR 25.0%
!!! TTGATGGTGAAGATTATAAT+AGG - chr1_2:73575954-73575973 Msa0091460:three_prime_UTR 25.0%
!! TGATGGTGAAGATTATAATA+GGG - chr1_2:73575955-73575974 Msa0091460:three_prime_UTR 25.0%
! TATACACAATCAATCAATGT+TGG + chr1_2:73576062-73576081 None:intergenic 25.0%
! AATCCCATTAACATATATTG+AGG + chr1_2:73576565-73576584 None:intergenic 25.0%
! TCAATATATGTTAATGGGAT+TGG - chr1_2:73576564-73576583 Msa0091460:three_prime_UTR 25.0%
! TCCAAAATAAAAATCACATG+CGG - chr1_2:73576740-73576759 Msa0091460:three_prime_UTR 25.0%
! CAAATTAAACCGCATATATT+TGG + chr1_2:73576810-73576829 None:intergenic 25.0%
! CAAATATATGCGGTTTAATT+TGG - chr1_2:73576808-73576827 Msa0091460:three_prime_UTR 25.0%
!!! CAAATATATTCGGTTTTTTG+CGG - chr1_2:73577219-73577238 Msa0091460:intron 25.0%
! AATTTCACATGTAACATCAA+GGG - chr1_2:73577350-73577369 Msa0091460:intron 25.0%
! GATGATGTACTTATAAAACT+TGG + chr1_2:73577668-73577687 None:intergenic 25.0%
! TGTTTACTATTTAGTTATCC+AGG + chr1_2:73577922-73577941 None:intergenic 25.0%
! GGATAACTAAATAGTAAACA+CGG - chr1_2:73577922-73577941 Msa0091460:intron 25.0%
! ACATTGAATTAAACACTTGA+AGG - chr1_2:73578052-73578071 Msa0091460:intron 25.0%
! TCAAAAAAGTCGATCTAAAT+AGG - chr1_2:73578699-73578718 Msa0091460:intron 25.0%
! TTTGAACTCATTGTACAAAT+GGG - chr1_2:73578785-73578804 Msa0091460:intron 25.0%
!!! TATTTTGGATGAGAATATCA+AGG - chr1_2:73579191-73579210 Msa0091460:intron 25.0%
! GTTAGATCATATCATTATCA+TGG - chr1_2:73579252-73579271 Msa0091460:intron 25.0%
!!! ATGCTACTAACTTGTTATTT+GGG + chr1_2:73579364-73579383 None:intergenic 25.0%
!!! TATGCTACTAACTTGTTATT+TGG + chr1_2:73579365-73579384 None:intergenic 25.0%
! AGTATATATTTCATCTCCTT+TGG + chr1_2:73579399-73579418 None:intergenic 25.0%
!!! TAAAAAAGTTGATAAGATGG+AGG + chr1_2:73579685-73579704 None:intergenic 25.0%
! TCTTTATATCTGGCTAAATT+AGG + chr1_2:73579852-73579871 None:intergenic 25.0%
!! ATTTTCAGCATCTTTATATC+TGG + chr1_2:73579862-73579881 None:intergenic 25.0%
! AAATTAGAAGATGAGATTTG+TGG - chr1_2:73579878-73579897 Msa0091460:intron 25.0%
!!! TATCTACTTGAGCTTTTTTA+AGG - chr1_2:73579981-73580000 Msa0091460:intron 25.0%
!!! TTTTTGTAGCTGCTATTTTT+TGG + chr1_2:73580122-73580141 None:intergenic 25.0%
!! GAATTTTGAATTCTATGCTT+TGG - chr1_2:73580514-73580533 Msa0091460:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG - chr1_2:73580525-73580544 Msa0091460:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG + chr1_2:73580559-73580578 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG - chr1_2:73580602-73580621 Msa0091460:intron 25.0%
! TCAGAAATCTATTAATGGAA+CGG + chr1_2:73580730-73580749 None:intergenic 25.0%
! TTGAAAAAAATTCTGTTCCA+AGG - chr1_2:73581164-73581183 Msa0091460:intron 25.0%
! ATTTATGCAAAATCTTTCCT+TGG + chr1_2:73581184-73581203 None:intergenic 25.0%
!! AAGGAAAGATTTTGCATAAA+TGG - chr1_2:73581183-73581202 Msa0091460:intron 25.0%
!! ATCATTTTCATATGTTGGTA+TGG + chr1_2:73581382-73581401 None:intergenic 25.0%
! TGAGAGAAAAAAAATAAGGA+AGG + chr1_2:73581726-73581745 None:intergenic 25.0%
! GTCATGAGAGAAAAAAAATA+AGG + chr1_2:73581730-73581749 None:intergenic 25.0%
!!! ATTTTTTTCAGAAAATGTGG+GGG + chr1_2:73581897-73581916 None:intergenic 25.0%
!!! CATTTTTTTCAGAAAATGTG+GGG + chr1_2:73581898-73581917 None:intergenic 25.0%
!!! CCATTTTTTTCAGAAAATGT+GGG + chr1_2:73581899-73581918 None:intergenic 25.0%
!!! ACCATTTTTTTCAGAAAATG+TGG + chr1_2:73581900-73581919 None:intergenic 25.0%
! AAGAATAAAGCATGAGATTA+AGG + chr1_2:73582154-73582173 None:intergenic 25.0%
!!! ATGTTTTAACATTCTATTGG+AGG - chr1_2:73582228-73582247 Msa0091460:three_prime_UTR 25.0%
!! AAATTCTATAGGAGGATTTT+AGG - chr1_2:73582269-73582288 Msa0091460:intron 25.0%
! AAATCACAATAAATCCTTTC+CGG + chr1_2:73582371-73582390 None:intergenic 25.0%
! AAAGGATTTATTGTGATTTC+CGG - chr1_2:73582372-73582391 Msa0091460:intron 25.0%
!!! AACATTTCTAGTATACATAC+CGG + chr1_2:73582394-73582413 None:intergenic 25.0%
! TTCCAAAAAAAATTCGGAAA+AGG - chr1_2:73582459-73582478 Msa0091460:intron 25.0%
!!! AACCTTTTCCGAATTTTTTT+TGG + chr1_2:73582464-73582483 None:intergenic 25.0%
! ATAAAAGGTTAAATAGCACA+AGG - chr1_2:73582588-73582607 Msa0091460:intron 25.0%
! TAAAAGGTTAAATAGCACAA+GGG - chr1_2:73582589-73582608 Msa0091460:intron 25.0%
!! ATATAATTTTGTGCACATAC+TGG - chr1_2:73582799-73582818 Msa0091460:intron 25.0%
! AATCATGTTGAAATTGTTTC+GGG + chr1_2:73582859-73582878 None:intergenic 25.0%
!! ATACTTTTAATGCATCAAGT+TGG + chr1_2:73582907-73582926 None:intergenic 25.0%
! TTTAAACTGGTATTAAGAAG+AGG - chr1_2:73582995-73583014 Msa0091460:intron 25.0%
! TAAAACTCACATACTTATCT+CGG + chr1_2:73583055-73583074 None:intergenic 25.0%
!!! GATTTCTTTTGCTTTTCTTT+TGG - chr1_2:73583145-73583164 Msa0091460:three_prime_UTR 25.0%
! TGTTCTTACATTATCAACAA+GGG + chr1_2:73583254-73583273 None:intergenic 25.0%
! TTGTTCTTACATTATCAACA+AGG + chr1_2:73583255-73583274 None:intergenic 25.0%
! TCAGACAAAAAATAAATAGG+CGG + chr1_2:73583314-73583333 None:intergenic 25.0%
! TGCTCAGACAAAAAATAAAT+AGG + chr1_2:73583317-73583336 None:intergenic 25.0%
!! AATTTTTATTCTCTCCTGTA+AGG - chr1_2:73583338-73583357 Msa0091460:three_prime_UTR 25.0%
! TTTAGTGGTCACTAATAATT+TGG - chr1_2:73583533-73583552 Msa0091460:CDS 25.0%
!! CATTTTACTCATTGAGTATA+TGG - chr1_2:73584154-73584173 Msa0091460:intron 25.0%
!!! AATTTTAGAGCTTTTGAAAC+TGG + chr1_2:73584626-73584645 None:intergenic 25.0%
!! ATATACAAAGCTTTAGTGAT+TGG - chr1_2:73584850-73584869 Msa0091460:five_prime_UTR 25.0%
! AAAAAGGACTACCATAATTT+CGG + chr1_2:73584942-73584961 None:intergenic 25.0%
!! AACAAAAAAACTAGTTTGGT+TGG - chr1_2:73585050-73585069 Msa0091460:five_prime_UTR 25.0%
! AAAAATGGATGCCATTAAAA+AGG + chr1_2:73585221-73585240 None:intergenic 25.0%
!! TTCACTTTAGAGAGTAAAAA+TGG + chr1_2:73585236-73585255 None:intergenic 25.0%
! CTTCATTATTAATGATGAGA+AGG + chr1_2:73585350-73585369 None:intergenic 25.0%
! TGTTTAATTAGATCAAAAGG+AGG - chr1_2:73585384-73585403 Msa0091460:intron 25.0%
!!! TGAATTATTGACTAGTCTTT+TGG - chr1_2:73585492-73585511 Msa0091460:intron 25.0%
!! CTTTAAATAAGCCGATTTAA+CGG + chr1_2:73585593-73585612 None:intergenic 25.0%
!! AGGAATGACAAGATTTTTAA+TGG - chr1_2:73586027-73586046 Msa0091460:five_prime_UTR 25.0%
!! GGAATGACAAGATTTTTAAT+GGG - chr1_2:73586028-73586047 Msa0091460:five_prime_UTR 25.0%
!!! CACCTAGTTTTATTTTGTTT+TGG - chr1_2:73586498-73586517 Msa0091460:five_prime_UTR 25.0%
! CACCAAAACAAAATAAAACT+AGG + chr1_2:73586503-73586522 None:intergenic 25.0%
!!! CTAGTTTTATTTTGTTTTGG+TGG - chr1_2:73586501-73586520 Msa0091460:five_prime_UTR 25.0%
!!! ATTTTGTTTTGGTGGTTTTT+TGG - chr1_2:73586509-73586528 Msa0091460:five_prime_UTR 25.0%
! AAAATACAATAAGGGGAAAT+CGG + chr1_2:73586664-73586683 None:intergenic 25.0%
! GGTGGAAAAAAAATACAATA+AGG + chr1_2:73586673-73586692 None:intergenic 25.0%
TCATACAAACATTGATGGAA+GGG + chr1_2:73575932-73575951 None:intergenic 30.0%
! AACTGTTTTCAAATGCAACA+GGG + chr1_2:73575997-73576016 None:intergenic 30.0%
CATTTGAAAACAGTTGAGAA+TGG - chr1_2:73576002-73576021 Msa0091460:three_prime_UTR 30.0%
ATAAACGTAGCAACAAAGAA+AGG + chr1_2:73576233-73576252 None:intergenic 30.0%
! AACACCTTATTTGTTAAGCA+AGG - chr1_2:73576278-73576297 Msa0091460:three_prime_UTR 30.0%
! ACACCTTATTTGTTAAGCAA+GGG - chr1_2:73576279-73576298 Msa0091460:three_prime_UTR 30.0%
TTACATCGTATATGAGCATT+TGG - chr1_2:73576376-73576395 Msa0091460:three_prime_UTR 30.0%
CATTTAACATGATGATTACG+TGG + chr1_2:73576471-73576490 None:intergenic 30.0%
AGTGCCTCAATATATGTTAA+TGG - chr1_2:73576558-73576577 Msa0091460:three_prime_UTR 30.0%
GTGCCTCAATATATGTTAAT+GGG - chr1_2:73576559-73576578 Msa0091460:three_prime_UTR 30.0%
!! TTTTCATGTTTTGTTGAGCT+TGG + chr1_2:73576633-73576652 None:intergenic 30.0%
TCAACAAAACATGAAAAGCT+TGG - chr1_2:73576636-73576655 Msa0091460:three_prime_UTR 30.0%
CAACAAAACATGAAAAGCTT+GGG - chr1_2:73576637-73576656 Msa0091460:three_prime_UTR 30.0%
!! ACCGCATGTGATTTTTATTT+TGG + chr1_2:73576744-73576763 None:intergenic 30.0%
AATAAAAATCACATGCGGTT+CGG - chr1_2:73576745-73576764 Msa0091460:three_prime_UTR 30.0%
TAAACCGCATATATTTGGAT+CGG + chr1_2:73576805-73576824 None:intergenic 30.0%
!! ATATGCGGTTTAATTTGGAT+CGG - chr1_2:73576813-73576832 Msa0091460:three_prime_UTR 30.0%
!!! GTTTAATTTGGATCGGTTTT+TGG - chr1_2:73576820-73576839 Msa0091460:three_prime_UTR 30.0%
CACAAACACGGTAAAATAAT+AGG - chr1_2:73576918-73576937 Msa0091460:three_prime_UTR 30.0%
TTTGTAAAAACCGCTAAGAT+CGG + chr1_2:73577181-73577200 None:intergenic 30.0%
CAAACGCATCCAAATATATT+CGG - chr1_2:73577209-73577228 Msa0091460:intron 30.0%
CGCAAAAAACCGAATATATT+TGG + chr1_2:73577221-73577240 None:intergenic 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr1_2:73577263-73577282 Msa0091460:intron 30.0%
CAATTTCACATGTAACATCA+AGG - chr1_2:73577349-73577368 Msa0091460:intron 30.0%
CGATGAAGTACATTAAATTC+AGG + chr1_2:73577461-73577480 None:intergenic 30.0%
AAGTACATTTCCTGAGTATA+TGG - chr1_2:73577498-73577517 Msa0091460:intron 30.0%
AGTACATTTCCTGAGTATAT+GGG - chr1_2:73577499-73577518 Msa0091460:intron 30.0%
TAAATATAGCCCATATACTC+AGG + chr1_2:73577511-73577530 None:intergenic 30.0%
AGAGAATGGTATACATCATA+TGG + chr1_2:73577623-73577642 None:intergenic 30.0%
AAAGAGAATGAAGTAGAGAA+TGG + chr1_2:73577637-73577656 None:intergenic 30.0%
!!! CATTTTTCTGAAGTTCAAAG+TGG + chr1_2:73577838-73577857 None:intergenic 30.0%
CACTTTGAACTTCAGAAAAA+TGG - chr1_2:73577836-73577855 Msa0091460:intron 30.0%
! TCAATGTTTTGCAAATTGTG+TGG + chr1_2:73578039-73578058 None:intergenic 30.0%
! AATTGAATTTTTACGGCTCT+CGG - chr1_2:73578093-73578112 Msa0091460:intron 30.0%
AACGAAAACTAGTTACTGTT+AGG + chr1_2:73578365-73578384 None:intergenic 30.0%
CGATCTAAATAGGTTCAATA+TGG - chr1_2:73578709-73578728 Msa0091460:intron 30.0%
GTTTGAACTCATTGTACAAA+TGG - chr1_2:73578784-73578803 Msa0091460:intron 30.0%
!!! AGAAGGCTTTTGAAATTTGA+AGG - chr1_2:73578887-73578906 Msa0091460:three_prime_UTR 30.0%
TGTAACATCAAACCTTGAAT+GGG - chr1_2:73579472-73579491 Msa0091460:intron 30.0%
! TGCTCTAGTTTATGTAACAA+TGG - chr1_2:73579505-73579524 Msa0091460:intron 30.0%
TAATATTCTTAGACCTGACA+AGG - chr1_2:73579529-73579548 Msa0091460:intron 30.0%
! CAATTAAATACTGGGTTGAA+AGG + chr1_2:73579566-73579585 None:intergenic 30.0%
CAACCCAGTATTTAATTGTT+CGG - chr1_2:73579568-73579587 Msa0091460:intron 30.0%
GATCCGAACAATTAAATACT+GGG + chr1_2:73579574-73579593 None:intergenic 30.0%
AGATCCGAACAATTAAATAC+TGG + chr1_2:73579575-73579594 None:intergenic 30.0%
AGTCAAATCATGAAAAGCTT+TGG + chr1_2:73579634-73579653 None:intergenic 30.0%
AAATTGAAAACATTGCCCAA+GGG + chr1_2:73579789-73579808 None:intergenic 30.0%
! TTTTCTGCTTAATTCAAAGC+CGG - chr1_2:73579939-73579958 Msa0091460:intron 30.0%
!!! ATTGCTTCTTTTTTTCCCAA+AGG - chr1_2:73580174-73580193 Msa0091460:intron 30.0%
CAATAGGAGACAAATAATAC+AGG + chr1_2:73580286-73580305 None:intergenic 30.0%
TCAGATCCATTACTACTTTA+TGG - chr1_2:73580433-73580452 Msa0091460:intron 30.0%
! TTCTTGTCTTATTGGAACAA+AGG - chr1_2:73580610-73580629 Msa0091460:intron 30.0%
ATATGGATGTTCATGAACAA+AGG + chr1_2:73580682-73580701 None:intergenic 30.0%
TTTGCCTGTCTAACAATTAA+AGG + chr1_2:73580765-73580784 None:intergenic 30.0%
AGAAATAGGATACATGTTCA+AGG + chr1_2:73580927-73580946 None:intergenic 30.0%
TATGTTATAGCTCATATACG+CGG - chr1_2:73581046-73581065 Msa0091460:intron 30.0%
TATGAGACCAGATTTATTCA+AGG - chr1_2:73581245-73581264 Msa0091460:three_prime_UTR 30.0%
!! TCTCATGGTGTCTTTTAAAA+TGG - chr1_2:73581443-73581462 Msa0091460:three_prime_UTR 30.0%
!!! CTCATGGTGTCTTTTAAAAT+GGG - chr1_2:73581444-73581463 Msa0091460:three_prime_UTR 30.0%
AATACAAATGCATGCTGTTA+GGG + chr1_2:73581595-73581614 None:intergenic 30.0%
AAGGTCAATTAAAACTAGAG+AGG + chr1_2:73581700-73581719 None:intergenic 30.0%
!!! TTTTTTTTCTCTCATGACAC+TGG - chr1_2:73581732-73581751 Msa0091460:intron 30.0%
CAATTAAAACTAGAGAGGAT+GGG + chr1_2:73581758-73581777 None:intergenic 30.0%
TCAATTAAAACTAGAGAGGA+TGG + chr1_2:73581759-73581778 None:intergenic 30.0%
AAAGGGTAAATTTGGAAGTT+GGG + chr1_2:73581844-73581863 None:intergenic 30.0%
TAAAGGGTAAATTTGGAAGT+TGG + chr1_2:73581845-73581864 None:intergenic 30.0%
!! CCCACATTTTCTGAAAAAAA+TGG - chr1_2:73581896-73581915 Msa0091460:intron 30.0%
AAGAAAGCTTACTGTTTGTT+AGG + chr1_2:73581947-73581966 None:intergenic 30.0%
ATTTCACGAAAATCTTGAAC+CGG - chr1_2:73582349-73582368 Msa0091460:intron 30.0%
AATTCGGAAAAGGTTTATAG+TGG - chr1_2:73582469-73582488 Msa0091460:intron 30.0%
AAAAGGTTAAATAGCACAAG+GGG - chr1_2:73582590-73582609 Msa0091460:intron 30.0%
ACCAAAAAAAAAACATGCCA+GGG + chr1_2:73582699-73582718 None:intergenic 30.0%
TACCAAAAAAAAAACATGCC+AGG + chr1_2:73582700-73582719 None:intergenic 30.0%
!!! TTTTTTTGGTAAAACATCCC+TGG - chr1_2:73582709-73582728 Msa0091460:intron 30.0%
CATTTGCTTGTTTACTTTCA+TGG + chr1_2:73582935-73582954 None:intergenic 30.0%
AAGTAAACAAGCAAATGTCT+CGG - chr1_2:73582938-73582957 Msa0091460:intron 30.0%
TGATTTCCTTATGTTACTGT+AGG - chr1_2:73583177-73583196 Msa0091460:three_prime_UTR 30.0%
TACATTATCAACAAGGGAAT+AGG + chr1_2:73583248-73583267 None:intergenic 30.0%
AGAACAAATACTGCACTTAA+TGG - chr1_2:73583268-73583287 Msa0091460:intron 30.0%
AAAAAATAAATAGGCGGTGA+AGG + chr1_2:73583308-73583327 None:intergenic 30.0%
! TGTTGTTTAAATGTGAGCTT+GGG - chr1_2:73583700-73583719 Msa0091460:intron 30.0%
!! AGTTTAATGAAGGTACTATG+TGG - chr1_2:73583861-73583880 Msa0091460:intron 30.0%
TTTATAGTGAGCATGTGTTA+TGG - chr1_2:73583928-73583947 Msa0091460:intron 30.0%
! GCTATGGATTAACTAATCAT+CGG + chr1_2:73583999-73584018 None:intergenic 30.0%
! GAGAAAATCTGAAATTACCT+TGG - chr1_2:73584126-73584145 Msa0091460:intron 30.0%
CATTGAGTATATGGCAATAA+AGG - chr1_2:73584163-73584182 Msa0091460:intron 30.0%
!!! AGGTTTACATTTTTTACGGT+GGG - chr1_2:73584492-73584511 Msa0091460:five_prime_UTR 30.0%
! GGATGTAATTCTTATTTCCT+AGG - chr1_2:73584514-73584533 Msa0091460:five_prime_UTR 30.0%
TTATTTCCTAGGCAATTTAG+AGG - chr1_2:73584525-73584544 Msa0091460:five_prime_UTR 30.0%
ATTTGAGGAATTTCCTAGTT+TGG - chr1_2:73584558-73584577 Msa0091460:five_prime_UTR 30.0%
TAGCCTGACAATTATGAAAT+CGG + chr1_2:73584918-73584937 None:intergenic 30.0%
!!! TAGAGAAGTATTTTTCAGCT+TGG - chr1_2:73585266-73585285 Msa0091460:intron 30.0%
!! ATGTGAGTTGGAATTTTGTT+TGG - chr1_2:73585443-73585462 Msa0091460:intron 30.0%
!!! ATTATTGACTAGTCTTTTGG+AGG - chr1_2:73585495-73585514 Msa0091460:intron 30.0%
! TCGGCTTATTTAAAGTTAGA+AGG - chr1_2:73585598-73585617 Msa0091460:intron 30.0%
!! AAGGTGTTTTTGAGAATATG+TGG - chr1_2:73585659-73585678 Msa0091460:intron 30.0%
AAAGCAAGATTATCTCTAGT+TGG + chr1_2:73585745-73585764 None:intergenic 30.0%
CTAGAGATAATCTTGCTTTA+AGG - chr1_2:73585746-73585765 Msa0091460:intron 30.0%
! ACCAAATTTGTTTGTCCTTT+GGG - chr1_2:73585915-73585934 Msa0091460:five_prime_UTR 30.0%
TAATTTGGCACACAACAATT+TGG - chr1_2:73585989-73586008 Msa0091460:five_prime_UTR 30.0%
AATTTGGCACACAACAATTT+GGG - chr1_2:73585990-73586009 Msa0091460:five_prime_UTR 30.0%
! ACACAACAATTTGGGTTATT+TGG - chr1_2:73585998-73586017 Msa0091460:five_prime_UTR 30.0%
! TTTGGGTTATTTGGAAAAAG+AGG - chr1_2:73586007-73586026 Msa0091460:five_prime_UTR 30.0%
!!! TTTTAATGGGTGTCATTTTG+AGG - chr1_2:73586041-73586060 Msa0091460:five_prime_UTR 30.0%
AAAAACCACCCAAATACAAA+AGG + chr1_2:73586603-73586622 None:intergenic 30.0%
! TGTATTTGGGTGGTTTTTAA+AGG - chr1_2:73586605-73586624 Msa0091460:five_prime_UTR 30.0%
! GTATTTGGGTGGTTTTTAAA+GGG - chr1_2:73586606-73586625 Msa0091460:five_prime_UTR 30.0%
!! TATTTGGGTGGTTTTTAAAG+GGG - chr1_2:73586607-73586626 Msa0091460:five_prime_UTR 30.0%
CATACAAACATTGATGGAAG+GGG + chr1_2:73575931-73575950 None:intergenic 35.0%
CTCATACAAACATTGATGGA+AGG + chr1_2:73575933-73575952 None:intergenic 35.0%
CAAGCTCATACAAACATTGA+TGG + chr1_2:73575937-73575956 None:intergenic 35.0%
CAATGTTTGTATGAGCTTGA+TGG - chr1_2:73575938-73575957 Msa0091460:three_prime_UTR 35.0%
! CAACTGTTTTCAAATGCAAC+AGG + chr1_2:73575998-73576017 None:intergenic 35.0%
TATACCTCAATGTTTGTGTG+GGG + chr1_2:73576029-73576048 None:intergenic 35.0%
CTATACCTCAATGTTTGTGT+GGG + chr1_2:73576030-73576049 None:intergenic 35.0%
TCTATACCTCAATGTTTGTG+TGG + chr1_2:73576031-73576050 None:intergenic 35.0%
ATGCAACAACTTCCTTAACA+AGG - chr1_2:73576115-73576134 Msa0091460:three_prime_UTR 35.0%
AACAGGACATAATGACAACT+CGG + chr1_2:73576171-73576190 None:intergenic 35.0%
TGACCCTTGCTTAACAAATA+AGG + chr1_2:73576285-73576304 None:intergenic 35.0%
TCAATGCTTTACAGATCCAT+TGG - chr1_2:73576302-73576321 Msa0091460:three_prime_UTR 35.0%
CAATGCTTTACAGATCCATT+GGG - chr1_2:73576303-73576322 Msa0091460:three_prime_UTR 35.0%
TACGATGTAATAAACCAGCA+TGG + chr1_2:73576366-73576385 None:intergenic 35.0%
TTACCCTTCTATACAGGATA+TGG - chr1_2:73576429-73576448 Msa0091460:three_prime_UTR 35.0%
TACCCTTCTATACAGGATAT+GGG - chr1_2:73576430-73576449 Msa0091460:three_prime_UTR 35.0%
TTCCCATATCCTGTATAGAA+GGG + chr1_2:73576435-73576454 None:intergenic 35.0%
TATATTGGAGGCAGCAAAAA+TGG - chr1_2:73576594-73576613 Msa0091460:three_prime_UTR 35.0%
!!! TTTATTTTTGCGGTTCGGTT+TGG - chr1_2:73577118-73577137 Msa0091460:three_prime_UTR 35.0%
CGAATATATTTGGATGCGTT+TGG + chr1_2:73577211-73577230 None:intergenic 35.0%
!!! ATTCGGTTTTTTGCGGTTTT+CGG - chr1_2:73577226-73577245 Msa0091460:intron 35.0%
! TTTGCGGTTTTCGGTTTTTT+TGG - chr1_2:73577235-73577254 Msa0091460:intron 35.0%
!!! GGTTTTCGGTTTTTTTGGAT+CGG - chr1_2:73577240-73577259 Msa0091460:intron 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG - chr1_2:73577258-73577277 Msa0091460:intron 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr1_2:73577268-73577287 Msa0091460:intron 35.0%
GGAAATGTACTTATACCGTT+TGG + chr1_2:73577490-73577509 None:intergenic 35.0%
!! TTCTGAAGTTCAAAGTGGTT+GGG + chr1_2:73577833-73577852 None:intergenic 35.0%
!! TTTCTGAAGTTCAAAGTGGT+TGG + chr1_2:73577834-73577853 None:intergenic 35.0%
GAATGTGTAATTCAATGCAC+AGG - chr1_2:73578295-73578314 Msa0091460:intron 35.0%
TGTAATTCAATGCACAGGTT+TGG - chr1_2:73578300-73578319 Msa0091460:intron 35.0%
GCGTGTGTATATATAGCAAT+AGG + chr1_2:73578864-73578883 None:intergenic 35.0%
ATATATACACACGCTTCAGA+AGG - chr1_2:73578870-73578889 Msa0091460:three_prime_UTR 35.0%
GAACCAAGCAATTTGAAGAT+AGG - chr1_2:73578961-73578980 Msa0091460:intron 35.0%
AAGCCTATCTTCAAATTGCT+TGG + chr1_2:73578967-73578986 None:intergenic 35.0%
! TTTTTGCTGAGATAAGAGGA+AGG - chr1_2:73578985-73579004 Msa0091460:intron 35.0%
TGAGATAAGAGGAAGGATAA+AGG - chr1_2:73578992-73579011 Msa0091460:intron 35.0%
TACGAAAAATTTGGAAGGGA+AGG - chr1_2:73579061-73579080 Msa0091460:intron 35.0%
!! CCTTTTGGTTATCGGATATA+CGG + chr1_2:73579109-73579128 None:intergenic 35.0%
!! TCATGGAACCTTTTGGTTAT+CGG + chr1_2:73579117-73579136 None:intergenic 35.0%
TGTCATTAACAGATGGATCA+TGG + chr1_2:73579134-73579153 None:intergenic 35.0%
TCATCCAAAATAACATGCTC+AGG + chr1_2:73579183-73579202 None:intergenic 35.0%
!!! CTACAGTATCGGTACTTTTA+AGG - chr1_2:73579230-73579249 Msa0091460:intron 35.0%
TTCAAGGTTTGATGTTACAC+TGG + chr1_2:73579471-73579490 None:intergenic 35.0%
GTGTAACATCAAACCTTGAA+TGG - chr1_2:73579471-73579490 Msa0091460:intron 35.0%
ATTGTTTGGACATAGGAGAA+AGG + chr1_2:73579729-73579748 None:intergenic 35.0%
TGAATCGATTGTTTGGACAT+AGG + chr1_2:73579736-73579755 None:intergenic 35.0%
AGGATCATGAATCGATTGTT+TGG + chr1_2:73579743-73579762 None:intergenic 35.0%
GAAATTGAAAACATTGCCCA+AGG + chr1_2:73579790-73579809 None:intergenic 35.0%
AAGCAGAAAACATCCAGTTT+CGG + chr1_2:73579929-73579948 None:intergenic 35.0%
ATCAGTCAGAAACTTATGTC+CGG + chr1_2:73579961-73579980 None:intergenic 35.0%
GCAGCTACAAAAAAGAATGA+AGG - chr1_2:73580129-73580148 Msa0091460:intron 35.0%
!!! TTTTTTTCCCAAAGGACTTG+TGG - chr1_2:73580182-73580201 Msa0091460:intron 35.0%
AATTACTCCACAAGTCCTTT+GGG + chr1_2:73580192-73580211 None:intergenic 35.0%
AAATTACTCCACAAGTCCTT+TGG + chr1_2:73580193-73580212 None:intergenic 35.0%
GAGCAATTGAACATAACTCA+AGG + chr1_2:73580257-73580276 None:intergenic 35.0%
ATTTGTCTCCTATTGTTCTC+AGG - chr1_2:73580291-73580310 Msa0091460:intron 35.0%
CAACAAAATACGTCACTGAA+AGG - chr1_2:73580332-73580351 Msa0091460:intron 35.0%
CCATTACTACTTTATGGCTA+CGG - chr1_2:73580439-73580458 Msa0091460:intron 35.0%
CATTACTACTTTATGGCTAC+GGG - chr1_2:73580440-73580459 Msa0091460:intron 35.0%
GGTAAAGCTTTCTTTGTCTT+AGG - chr1_2:73580631-73580650 Msa0091460:intron 35.0%
CATCTTGCATACAACAAAAC+AGG + chr1_2:73580659-73580678 None:intergenic 35.0%
TCTGCCTTTAATTGTTAGAC+AGG - chr1_2:73580758-73580777 Msa0091460:intron 35.0%
AAAGAAATTTACCTCCCAGT+CGG + chr1_2:73581343-73581362 None:intergenic 35.0%
TTTCATATGTTGGTATGGAG+TGG + chr1_2:73581377-73581396 None:intergenic 35.0%
! TTCTGTTTGACTTTCTCTCA+TGG - chr1_2:73581428-73581447 Msa0091460:three_prime_UTR 35.0%
! ACGTGTTTTATGTTGCCTTT+AGG - chr1_2:73581493-73581512 Msa0091460:three_prime_UTR 35.0%
! CGTTTTCTTATGCTTCCTAA+AGG + chr1_2:73581511-73581530 None:intergenic 35.0%
ATACAAATGCATGCTGTTAG+GGG + chr1_2:73581594-73581613 None:intergenic 35.0%
CAATACAAATGCATGCTGTT+AGG + chr1_2:73581596-73581615 None:intergenic 35.0%
TTCCGTTTAGAAGAAATCAC+AGG - chr1_2:73581781-73581800 Msa0091460:intron 35.0%
TCCGTTTAGAAGAAATCACA+GGG - chr1_2:73581782-73581801 Msa0091460:intron 35.0%
TCCCTGTGATTTCTTCTAAA+CGG + chr1_2:73581786-73581805 None:intergenic 35.0%
AAGGGTAAATTTGGAAGTTG+GGG + chr1_2:73581843-73581862 None:intergenic 35.0%
! TTTCTGAAAAAAATGGTCGC+TGG - chr1_2:73581903-73581922 Msa0091460:intron 35.0%
! TTCTGAAAAAAATGGTCGCT+GGG - chr1_2:73581904-73581923 Msa0091460:intron 35.0%
CGTTGAAAAGAATACGATCA+TGG + chr1_2:73582074-73582093 None:intergenic 35.0%
! TGATCGTATTCTTTTCAACG+AGG - chr1_2:73582074-73582093 Msa0091460:intron 35.0%
! CGAGTCTTCCGAATAATTTT+CGG - chr1_2:73582419-73582438 Msa0091460:intron 35.0%
ATACCTGGAAGAATATCATG+TGG - chr1_2:73582510-73582529 Msa0091460:intron 35.0%
TACCTGGAAGAATATCATGT+GGG - chr1_2:73582511-73582530 Msa0091460:intron 35.0%
AATAGCACAAGGGGTAAAAT+TGG - chr1_2:73582599-73582618 Msa0091460:intron 35.0%
!!! TCCCTGGCATGTTTTTTTTT+TGG - chr1_2:73582695-73582714 Msa0091460:intron 35.0%
AATACAGAAGTAACATGCCA+GGG + chr1_2:73582729-73582748 None:intergenic 35.0%
TAATACAGAAGTAACATGCC+AGG + chr1_2:73582730-73582749 None:intergenic 35.0%
AATTATATGACACAGCAGCA+AGG + chr1_2:73582787-73582806 None:intergenic 35.0%
!! ATTTTGTGCACATACTGGTT+TGG - chr1_2:73582804-73582823 Msa0091460:intron 35.0%
TTGTTTCGGGAAATGAGAAA+TGG + chr1_2:73582846-73582865 None:intergenic 35.0%
AGCTACTATTTGTAGCTTCA+TGG + chr1_2:73582883-73582902 None:intergenic 35.0%
TATCTCGGAAGGAATATAAG+CGG + chr1_2:73583040-73583059 None:intergenic 35.0%
TCATTCCATACGATATCATG+TGG + chr1_2:73583127-73583146 None:intergenic 35.0%
TCCTTATGTTACTGTAGGAA+TGG - chr1_2:73583182-73583201 Msa0091460:three_prime_UTR 35.0%
CCTTATGTTACTGTAGGAAT+GGG - chr1_2:73583183-73583202 Msa0091460:three_prime_UTR 35.0%
CTTATGTTACTGTAGGAATG+GGG - chr1_2:73583184-73583203 Msa0091460:three_prime_UTR 35.0%
TTATTCTCTCCTGTAAGGAA+TGG - chr1_2:73583343-73583362 Msa0091460:three_prime_UTR 35.0%
! TTCTATTTCTCGTTCTATGC+AGG - chr1_2:73583395-73583414 Msa0091460:three_prime_UTR 35.0%
CAGCTGTAACAAGAATATGT+GGG + chr1_2:73583437-73583456 None:intergenic 35.0%
CTTGTTACAGCTGGATTAAA+TGG - chr1_2:73583444-73583463 Msa0091460:CDS 35.0%
GTGGTCACTAATAATTTGGT+TGG - chr1_2:73583537-73583556 Msa0091460:CDS 35.0%
GTTCAGAATACAAAACACGT+GGG + chr1_2:73583629-73583648 None:intergenic 35.0%
AAAGTTCGTGGCAAAATTGA+GGG - chr1_2:73583653-73583672 Msa0091460:intron 35.0%
! CTGTTGTTTAAATGTGAGCT+TGG - chr1_2:73583699-73583718 Msa0091460:intron 35.0%
GTTGTTTAAATGTGAGCTTG+GGG - chr1_2:73583701-73583720 Msa0091460:intron 35.0%
!! ATGTCTCTGTTCTCTTGTTT+TGG - chr1_2:73583812-73583831 Msa0091460:intron 35.0%
!!! CTGTTCTCTTGTTTTGGTTA+CGG - chr1_2:73583818-73583837 Msa0091460:intron 35.0%
CATCAAGTATCTCACATCAT+AGG + chr1_2:73584065-73584084 None:intergenic 35.0%
CTATGATGTGAGATACTTGA+TGG - chr1_2:73584063-73584082 Msa0091460:intron 35.0%
! ATGTGAGATACTTGATGGTA+TGG - chr1_2:73584068-73584087 Msa0091460:intron 35.0%
GTTACATTGCCATCAATTTC+AGG - chr1_2:73584094-73584113 Msa0091460:intron 35.0%
CAGGAAATTCCTGAAATTGA+TGG + chr1_2:73584106-73584125 None:intergenic 35.0%
CATCAATTTCAGGAATTTCC+TGG - chr1_2:73584104-73584123 Msa0091460:intron 35.0%
! GGTAATTTCAGATTTTCTCC+AGG + chr1_2:73584125-73584144 None:intergenic 35.0%
ATGAGTAAAATGCATTGCCA+AGG + chr1_2:73584146-73584165 None:intergenic 35.0%
ATCAAAACAAGCACAAAGTG+CGG + chr1_2:73584190-73584209 None:intergenic 35.0%
!!! GAGGTTTACATTTTTTACGG+TGG - chr1_2:73584491-73584510 Msa0091460:five_prime_UTR 35.0%
!!! GGTTTACATTTTTTACGGTG+GGG - chr1_2:73584493-73584512 Msa0091460:five_prime_UTR 35.0%
TGTAAACCTCTAAATTGCCT+AGG + chr1_2:73584534-73584553 None:intergenic 35.0%
AGAGGTTTACACACAATTTG+AGG - chr1_2:73584543-73584562 Msa0091460:five_prime_UTR 35.0%
CATGTGAACTTCAAATTGCT+TGG - chr1_2:73584648-73584667 Msa0091460:five_prime_UTR 35.0%
!! TCACCGATTTCATAATTGTC+AGG - chr1_2:73584912-73584931 Msa0091460:five_prime_UTR 35.0%
TTGAGAAAAAGAAAAAGCGG+AGG - chr1_2:73585297-73585316 Msa0091460:intron 35.0%
ATTAGATCAAAAGGAGGCTT+TGG - chr1_2:73585390-73585409 Msa0091460:intron 35.0%
! GAGAAGAAGACTTTTTGTGT+GGG - chr1_2:73585465-73585484 Msa0091460:intron 35.0%
! CGTTTTGTGTGATGTGTAAT+AGG - chr1_2:73585794-73585813 Msa0091460:intron 35.0%
ACAATGCAATAAGAGATGAG+TGG + chr1_2:73585833-73585852 None:intergenic 35.0%
CAAAGGACAAACAAATTTGG+TGG + chr1_2:73585916-73585935 None:intergenic 35.0%
! CACCAAATTTGTTTGTCCTT+TGG - chr1_2:73585914-73585933 Msa0091460:five_prime_UTR 35.0%
TCCCAAAGGACAAACAAATT+TGG + chr1_2:73585919-73585938 None:intergenic 35.0%
!! AAGAGATTAAAGTGTTGTCG+TGG - chr1_2:73586079-73586098 Msa0091460:five_prime_UTR 35.0%
CACTCATAGAAAAGACAACA+CGG + chr1_2:73586132-73586151 None:intergenic 35.0%
TATCTGTCAAGGCAATATGT+CGG + chr1_2:73586165-73586184 None:intergenic 35.0%
TGCTGGTATATCTTTGTAGT+GGG - chr1_2:73586319-73586338 Msa0091460:five_prime_UTR 35.0%
! TATATCTTTGTAGTGGGACT+GGG - chr1_2:73586325-73586344 Msa0091460:five_prime_UTR 35.0%
!!! TTTGCAGGTTCTGGTTTTAT+TGG - chr1_2:73586431-73586450 Msa0091460:five_prime_UTR 35.0%
!!! TTGCAGGTTCTGGTTTTATT+GGG - chr1_2:73586432-73586451 Msa0091460:five_prime_UTR 35.0%
!!! TTATTGGGAGGATTTTTAGC+TGG - chr1_2:73586447-73586466 Msa0091460:five_prime_UTR 35.0%
ATTCGTGCGTCATTACTATT+TGG - chr1_2:73586571-73586590 Msa0091460:five_prime_UTR 35.0%
TTCGTGCGTCATTACTATTT+GGG - chr1_2:73586572-73586591 Msa0091460:five_prime_UTR 35.0%
!!! TGGGTTGATCCTTTTGTATT+TGG - chr1_2:73586591-73586610 Msa0091460:five_prime_UTR 35.0%
!! GGGTTGATCCTTTTGTATTT+GGG - chr1_2:73586592-73586611 Msa0091460:five_prime_UTR 35.0%
! TTGATCCTTTTGTATTTGGG+TGG - chr1_2:73586595-73586614 Msa0091460:five_prime_UTR 35.0%
TCTATACCTCAATGTTTGCG+TGG - chr1_2:73575889-73575908 Msa0091460:three_prime_UTR 40.0%
CTATACCTCAATGTTTGCGT+GGG - chr1_2:73575890-73575909 Msa0091460:three_prime_UTR 40.0%
TATACCTCAATGTTTGCGTG+GGG - chr1_2:73575891-73575910 Msa0091460:three_prime_UTR 40.0%
ATTGATGGAAGGGGAAATTG+AGG + chr1_2:73575922-73575941 None:intergenic 40.0%
ATTTGGTTGTCAAGCTGATC+CGG - chr1_2:73576393-73576412 Msa0091460:three_prime_UTR 40.0%
GTATAGAAGGGTAATTCCTC+TGG + chr1_2:73576423-73576442 None:intergenic 40.0%
GAGGAATTACCCTTCTATAC+AGG - chr1_2:73576423-73576442 Msa0091460:three_prime_UTR 40.0%
GTTCCCATATCCTGTATAGA+AGG + chr1_2:73576436-73576455 None:intergenic 40.0%
TCTATACAGGATATGGGAAC+TGG - chr1_2:73576436-73576455 Msa0091460:three_prime_UTR 40.0%
! CTTCTTTCATCGAGAAGCAT+AGG - chr1_2:73576491-73576510 Msa0091460:three_prime_UTR 40.0%
ATTGGCTGATGCTATATTGG+AGG - chr1_2:73576582-73576601 Msa0091460:three_prime_UTR 40.0%
ATTCTCTAAGCACTACAGCT+AGG - chr1_2:73576668-73576687 Msa0091460:three_prime_UTR 40.0%
TTCTCTAAGCACTACAGCTA+GGG - chr1_2:73576669-73576688 Msa0091460:three_prime_UTR 40.0%
!! ATATTTGGATCGGTTCGGTT+CGG + chr1_2:73576795-73576814 None:intergenic 40.0%
CGCATATATTTGGATCGGTT+CGG + chr1_2:73576800-73576819 None:intergenic 40.0%
CGAACCGATCCAAATATATG+CGG - chr1_2:73576798-73576817 Msa0091460:three_prime_UTR 40.0%
AAAAACCGCTAAGATCGGAT+CGG + chr1_2:73577176-73577195 None:intergenic 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG - chr1_2:73577247-73577266 Msa0091460:intron 40.0%
TGGGACACATGTATGATTTC+TGG - chr1_2:73577580-73577599 Msa0091460:intron 40.0%
! TCTGAAGTTCAAAGTGGTTG+GGG + chr1_2:73577832-73577851 None:intergenic 40.0%
CTATTTAGTTATCCAGGTCC+AGG + chr1_2:73577916-73577935 None:intergenic 40.0%
AATTGACCTCTGTAGCGAAA+TGG - chr1_2:73578011-73578030 Msa0091460:intron 40.0%
! GGAAAATGCTTACACCGATT+CGG - chr1_2:73578154-73578173 Msa0091460:intron 40.0%
! TTCTAGAAGCTGAACCAGTT+CGG + chr1_2:73578342-73578361 None:intergenic 40.0%
GAACGATCATGAAGAGCTTA+TGG - chr1_2:73578547-73578566 Msa0091460:intron 40.0%
! ATGACTGTAACATGCTGACT+AGG - chr1_2:73578834-73578853 Msa0091460:three_prime_UTR 40.0%
! AGGCTTTTTGCTGAGATAAG+AGG - chr1_2:73578981-73579000 Msa0091460:intron 40.0%
GATAAGAGGAAGGATAAAGG+AGG - chr1_2:73578995-73579014 Msa0091460:intron 40.0%
CCGTATATCCGATAACCAAA+AGG - chr1_2:73579106-73579125 Msa0091460:three_prime_UTR 40.0%
! AGATGGATCATGGAACCTTT+TGG + chr1_2:73579124-73579143 None:intergenic 40.0%
!! TCCTCCTGAGCATGTTATTT+TGG - chr1_2:73579176-73579195 Msa0091460:intron 40.0%
TCCAAAATAACATGCTCAGG+AGG + chr1_2:73579180-73579199 None:intergenic 40.0%
CAGCACGAATACTACAGTAT+CGG - chr1_2:73579219-73579238 Msa0091460:intron 40.0%
TTTGATGTTACACTGGCAAG+AGG + chr1_2:73579464-73579483 None:intergenic 40.0%
TATTCTTAGACCTGACAAGG+TGG - chr1_2:73579532-73579551 Msa0091460:intron 40.0%
ATTCTTAGACCTGACAAGGT+GGG - chr1_2:73579533-73579552 Msa0091460:intron 40.0%
TGAATATGCGAGAAGACGTT+AGG + chr1_2:73579763-73579782 None:intergenic 40.0%
GAACATAACTCAAGGAAACG+AGG + chr1_2:73580249-73580268 None:intergenic 40.0%
TCCTATTGTTCTCAGGTTCT+CGG - chr1_2:73580298-73580317 Msa0091460:intron 40.0%
! CGAGCTTCACAAGATCTTTT+CGG + chr1_2:73580408-73580427 None:intergenic 40.0%
AAAGATCTTGTGAAGCTCGA+TGG - chr1_2:73580409-73580428 Msa0091460:intron 40.0%
CCGTAGCCATAAAGTAGTAA+TGG + chr1_2:73580442-73580461 None:intergenic 40.0%
AATTGTTAGACAGGCAAAGC+TGG - chr1_2:73580767-73580786 Msa0091460:intron 40.0%
AACTTCTGCAACCAAAGGAA+CGG + chr1_2:73580860-73580879 None:intergenic 40.0%
TGCAAAACTTCTGCAACCAA+AGG + chr1_2:73580865-73580884 None:intergenic 40.0%
! TGCAGAAGTTTTGCAGTCTA+AGG - chr1_2:73580870-73580889 Msa0091460:intron 40.0%
! AGCCTTGATGACTTGAAACT+GGG + chr1_2:73581001-73581020 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG + chr1_2:73581002-73581021 None:intergenic 40.0%
AGGCTTTCATTGTTAGATCG+AGG - chr1_2:73581016-73581035 Msa0091460:intron 40.0%
ACAGCAGCCTTGAATAAATC+TGG + chr1_2:73581255-73581274 None:intergenic 40.0%
GAAGTAGTGAGAGGAATAGT+TGG + chr1_2:73581321-73581340 None:intergenic 40.0%
!! CTGTTAGGGGAGTATTCATT+CGG + chr1_2:73581581-73581600 None:intergenic 40.0%
! TTAAAACTAGAGAGGTGTGC+AGG + chr1_2:73581692-73581711 None:intergenic 40.0%
! GGTATAATAGTAGGGGTGTA+GGG + chr1_2:73581816-73581835 None:intergenic 40.0%
! AGGTATAATAGTAGGGGTGT+AGG + chr1_2:73581817-73581836 None:intergenic 40.0%
GGGTCAAGGTATAATAGTAG+GGG + chr1_2:73581823-73581842 None:intergenic 40.0%
GGGGTCAAGGTATAATAGTA+GGG + chr1_2:73581824-73581843 None:intergenic 40.0%
TGGGGTCAAGGTATAATAGT+AGG + chr1_2:73581825-73581844 None:intergenic 40.0%
AAATTTGGAAGTTGGGGTCA+AGG + chr1_2:73581837-73581856 None:intergenic 40.0%
! GCTTACTGTTTGTTAGGAGT+GGG + chr1_2:73581941-73581960 None:intergenic 40.0%
! AGCTTACTGTTTGTTAGGAG+TGG + chr1_2:73581942-73581961 None:intergenic 40.0%
TTCTTCTTCAACGAGAGAAG+TGG + chr1_2:73582126-73582145 None:intergenic 40.0%
ACGAAAATCTTGAACCGGAA+AGG - chr1_2:73582354-73582373 Msa0091460:intron 40.0%
ACCTGGAAGAATATCATGTG+GGG - chr1_2:73582512-73582531 Msa0091460:intron 40.0%
!! ACATACTGGTTTGGATGTGT+GGG - chr1_2:73582813-73582832 Msa0091460:intron 40.0%
ACTCACATACTTATCTCGGA+AGG + chr1_2:73583051-73583070 None:intergenic 40.0%
CAACTCCACATGATATCGTA+TGG - chr1_2:73583119-73583138 Msa0091460:three_prime_UTR 40.0%
CCCATTCCTACAGTAACATA+AGG + chr1_2:73583186-73583205 None:intergenic 40.0%
AAGTAGAATTCCTCCTTCCT+AGG + chr1_2:73583214-73583233 None:intergenic 40.0%
TCCTGTAAGGAATGGTTACT+AGG - chr1_2:73583351-73583370 Msa0091460:three_prime_UTR 40.0%
TCCTAGTAACCATTCCTTAC+AGG + chr1_2:73583355-73583374 None:intergenic 40.0%
CCAGCTGTAACAAGAATATG+TGG + chr1_2:73583438-73583457 None:intergenic 40.0%
CCACATATTCTTGTTACAGC+TGG - chr1_2:73583435-73583454 Msa0091460:CDS 40.0%
TGGTAAGCATACCTGATTCT+TGG - chr1_2:73583464-73583483 Msa0091460:CDS 40.0%
ATAGTTCAGTGCCAAGAATC+AGG + chr1_2:73583478-73583497 None:intergenic 40.0%
GGTTCAGAATACAAAACACG+TGG + chr1_2:73583630-73583649 None:intergenic 40.0%
! AATTTTGCCACGAACTTTGC+AGG + chr1_2:73583651-73583670 None:intergenic 40.0%
CAAAGTTCGTGGCAAAATTG+AGG - chr1_2:73583652-73583671 Msa0091460:intron 40.0%
!!! GACTTTTTTCGAAGTCAGGA+AGG - chr1_2:73583727-73583746 Msa0091460:intron 40.0%
!!! TTCTCTTGTTTTGGTTACGG+TGG - chr1_2:73583821-73583840 Msa0091460:intron 40.0%
!!! TCTCTTGTTTTGGTTACGGT+GGG - chr1_2:73583822-73583841 Msa0091460:intron 40.0%
GTTATGGACTTCTACAGCTA+AGG - chr1_2:73583944-73583963 Msa0091460:intron 40.0%
!! TGCTGGTTTCACTTAAGCTA+TGG + chr1_2:73584015-73584034 None:intergenic 40.0%
AGGCTTAGAAGTTAGAACCA+GGG + chr1_2:73584045-73584064 None:intergenic 40.0%
TAGGCTTAGAAGTTAGAACC+AGG + chr1_2:73584046-73584065 None:intergenic 40.0%
TGTCAGGCTATCCGAAATTA+TGG - chr1_2:73584928-73584947 Msa0091460:five_prime_UTR 40.0%
! GGAGAAGAAGACTTTTTGTG+TGG - chr1_2:73585464-73585483 Msa0091460:intron 40.0%
! AAGAAGACTTTTTGTGTGGG+AGG - chr1_2:73585468-73585487 Msa0091460:intron 40.0%
!!! GACTAGTCTTTTGGAGGATT+TGG - chr1_2:73585501-73585520 Msa0091460:intron 40.0%
!! TAGTCTTTTGGAGGATTTGG+AGG - chr1_2:73585504-73585523 Msa0091460:intron 40.0%
!! AGTCTTTTGGAGGATTTGGA+GGG - chr1_2:73585505-73585524 Msa0091460:intron 40.0%
GGGTATGAGATTGTCAAATG+CGG - chr1_2:73585525-73585544 Msa0091460:intron 40.0%
TGGGGTGTATTCCGTTAAAT+CGG - chr1_2:73585579-73585598 Msa0091460:intron 40.0%
AGAAGGAATTGTGTTGAGTG+AGG - chr1_2:73585615-73585634 Msa0091460:intron 40.0%
TTGTGTTGAGTGAGGATATG+TGG - chr1_2:73585623-73585642 Msa0091460:intron 40.0%
TGTGTTGAGTGAGGATATGT+GGG - chr1_2:73585624-73585643 Msa0091460:intron 40.0%
!! AAAGGCTATCACTTTTGACG+GGG + chr1_2:73585695-73585714 None:intergenic 40.0%
!! CAAAGGCTATCACTTTTGAC+GGG + chr1_2:73585696-73585715 None:intergenic 40.0%
!! CCAAAGGCTATCACTTTTGA+CGG + chr1_2:73585697-73585716 None:intergenic 40.0%
CAAAAGTGATAGCCTTTGGT+TGG - chr1_2:73585698-73585717 Msa0091460:intron 40.0%
TTTAAGGAACGTGTTACCAC+CGG - chr1_2:73585762-73585781 Msa0091460:intron 40.0%
TGTGGTTGAAGCTTATGCTA+TGG - chr1_2:73585869-73585888 Msa0091460:intron 40.0%
GTTGAAGCTTATGCTATGGT+TGG - chr1_2:73585873-73585892 Msa0091460:intron 40.0%
CGAAGGGTCTTTGGTTAATT+TGG - chr1_2:73585974-73585993 Msa0091460:five_prime_UTR 40.0%
!!! TAATGGGTGTCATTTTGAGG+TGG - chr1_2:73586044-73586063 Msa0091460:five_prime_UTR 40.0%
!! AGATTAAAGTGTTGTCGTGG+AGG - chr1_2:73586082-73586101 Msa0091460:five_prime_UTR 40.0%
! CGTGTTGTCTTTTCTATGAG+TGG - chr1_2:73586130-73586149 Msa0091460:five_prime_UTR 40.0%
! GTCTTTTCTATGAGTGGTGT+TGG - chr1_2:73586136-73586155 Msa0091460:five_prime_UTR 40.0%
ATCTGTCAAGGCAATATGTC+GGG + chr1_2:73586164-73586183 None:intergenic 40.0%
! GTGCTGGTATATCTTTGTAG+TGG - chr1_2:73586318-73586337 Msa0091460:five_prime_UTR 40.0%
! GTATATCTTTGTAGTGGGAC+TGG - chr1_2:73586324-73586343 Msa0091460:five_prime_UTR 40.0%
! ATATCTTTGTAGTGGGACTG+GGG - chr1_2:73586326-73586345 Msa0091460:five_prime_UTR 40.0%
!!! TGTTTTGGGGTCATTGGTTT+TGG - chr1_2:73586387-73586406 Msa0091460:five_prime_UTR 40.0%
TAAAACCAGAACCTGCAAAG+AGG + chr1_2:73586430-73586449 None:intergenic 40.0%
!! CAAGAAGCACTAATAAGCTC+GGG + chr1_2:73586694-73586713 None:intergenic 40.0%
!! GCAAGAAGCACTAATAAGCT+CGG + chr1_2:73586695-73586714 None:intergenic 40.0%
GCTTATTAGTGCTTCTTGCA+CGG - chr1_2:73586696-73586715 Msa0091460:five_prime_UTR 40.0%
CTTATTAGTGCTTCTTGCAC+GGG - chr1_2:73586697-73586716 Msa0091460:five_prime_UTR 40.0%
TTCCTTAACAAGGCCTCTGT+TGG - chr1_2:73576125-73576144 Msa0091460:three_prime_UTR 45.0%
ATGTCCTGTTACACAAGTCG+AGG - chr1_2:73576181-73576200 Msa0091460:three_prime_UTR 45.0%
TACGTTTATTCCGAGCGCAA+TGG - chr1_2:73576244-73576263 Msa0091460:three_prime_UTR 45.0%
! AATTGACTCACCATTGCGCT+CGG + chr1_2:73576257-73576276 None:intergenic 45.0%
GGGAATGGTAAAGTTCCCAA+TGG + chr1_2:73576321-73576340 None:intergenic 45.0%
TAAAAGCCGCTAAGCTAACC+GGG + chr1_2:73576343-73576362 None:intergenic 45.0%
GTAAAAGCCGCTAAGCTAAC+CGG + chr1_2:73576344-73576363 None:intergenic 45.0%
!! GGGATTGGCTGATGCTATAT+TGG - chr1_2:73576579-73576598 Msa0091460:three_prime_UTR 45.0%
TCTCTAAGCACTACAGCTAG+GGG - chr1_2:73576670-73576689 Msa0091460:three_prime_UTR 45.0%
!! AAATCACATGCGGTTCGGTT+TGG - chr1_2:73576750-73576769 Msa0091460:three_prime_UTR 45.0%
!!! TTTTGCGGTTCGGTTTGGTT+CGG - chr1_2:73577123-73577142 Msa0091460:three_prime_UTR 45.0%
GCTAAGATCGGATCGGATTT+CGG + chr1_2:73577169-73577188 None:intergenic 45.0%
GAAATCCGATCCGATCTTAG+CGG - chr1_2:73577168-73577187 Msa0091460:intron 45.0%
ACTTCCGACTGCTGTAGTTA+GGG + chr1_2:73577304-73577323 None:intergenic 45.0%
AACTTCCGACTGCTGTAGTT+AGG + chr1_2:73577305-73577324 None:intergenic 45.0%
! CATGTAACATCAAGGGCACA+TGG - chr1_2:73577357-73577376 Msa0091460:intron 45.0%
ACTTCATCGTCGTTGCCAAA+CGG - chr1_2:73577472-73577491 Msa0091460:intron 45.0%
AGCTGCTATCATGATGAGCA+TGG - chr1_2:73577793-73577812 Msa0091460:intron 45.0%
ATACATACACTTGCTCTGCC+TGG - chr1_2:73577895-73577914 Msa0091460:intron 45.0%
! ATACGAAAGCACATCCGGAT+CGG + chr1_2:73578126-73578145 None:intergenic 45.0%
! CGGTGTAAGCATTTTCCTGA+CGG + chr1_2:73578151-73578170 None:intergenic 45.0%
GATACCTGACATGACCGAAT+CGG + chr1_2:73578171-73578190 None:intergenic 45.0%
AAGAGCAGTGAAAGCGAAAG+AGG + chr1_2:73578218-73578237 None:intergenic 45.0%
TCAGAATTTCCGAACCGAAC+TGG - chr1_2:73578325-73578344 Msa0091460:intron 45.0%
CTCACAAATGAACTCGCCAA+TGG - chr1_2:73578406-73578425 Msa0091460:intron 45.0%
ATAACTGCACCTGTACGCAA+AGG - chr1_2:73579023-73579042 Msa0091460:intron 45.0%
TAACTGCACCTGTACGCAAA+GGG - chr1_2:73579024-73579043 Msa0091460:intron 45.0%
TAATACGACCCTTTGCGTAC+AGG + chr1_2:73579035-73579054 None:intergenic 45.0%
!! GGCATGGTGTCATTAACAGA+TGG + chr1_2:73579141-73579160 None:intergenic 45.0%
GTTAATGACACCATGCCTAC+AGG - chr1_2:73579144-73579163 Msa0091460:intron 45.0%
GCATATGCAGAAGACACCAA+AGG - chr1_2:73579380-73579399 Msa0091460:intron 45.0%
ATCGAGACTCAAGCTGCAAT+TGG - chr1_2:73579434-73579453 Msa0091460:intron 45.0%
ACATCAAACCTTGAATGGGC+TGG - chr1_2:73579476-73579495 Msa0091460:intron 45.0%
TCTCGCATATTCAAAGCCCT+TGG - chr1_2:73579770-73579789 Msa0091460:intron 45.0%
CTCGCATATTCAAAGCCCTT+GGG - chr1_2:73579771-73579790 Msa0091460:intron 45.0%
TTTCAACCTGCAACCGAAAC+TGG - chr1_2:73579913-73579932 Msa0091460:intron 45.0%
AAACATCCAGTTTCGGTTGC+AGG + chr1_2:73579922-73579941 None:intergenic 45.0%
TCCGAGAACCTGAGAACAAT+AGG + chr1_2:73580302-73580321 None:intergenic 45.0%
TATTGTTCTCAGGTTCTCGG+AGG - chr1_2:73580301-73580320 Msa0091460:intron 45.0%
AATACGTCACTGAAAGGCAG+TGG - chr1_2:73580338-73580357 Msa0091460:intron 45.0%
ATACGTCACTGAAAGGCAGT+GGG - chr1_2:73580339-73580358 Msa0091460:intron 45.0%
TAGCACCCATATACCACAGA+GGG + chr1_2:73580824-73580843 None:intergenic 45.0%
ATAGCACCCATATACCACAG+AGG + chr1_2:73580825-73580844 None:intergenic 45.0%
! TTTTAGTCAGCCCGTTCCTT+TGG - chr1_2:73580846-73580865 Msa0091460:intron 45.0%
ACTTCTGCAACCAAAGGAAC+GGG + chr1_2:73580859-73580878 None:intergenic 45.0%
! TGTGGACAATTTGAGGTCAC+TGG + chr1_2:73580965-73580984 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG - chr1_2:73580964-73580983 Msa0091460:intron 45.0%
GCATACCTGTGGACAATTTG+AGG + chr1_2:73580972-73580991 None:intergenic 45.0%
! CTCCCAGTTTCAAGTCATCA+AGG - chr1_2:73580996-73581015 Msa0091460:intron 45.0%
GTTATAGCTCATATACGCGG+AGG - chr1_2:73581049-73581068 Msa0091460:intron 45.0%
! TGCATAAATGGCAGAAGTGC+TGG - chr1_2:73581195-73581214 Msa0091460:intron 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG - chr1_2:73581196-73581215 Msa0091460:intron 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG - chr1_2:73581197-73581216 Msa0091460:intron 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG - chr1_2:73581198-73581217 Msa0091460:intron 45.0%
!! AACATCCACCAAAGGTACTC+TGG + chr1_2:73581280-73581299 None:intergenic 45.0%
GTTGTCACAACATCCACCAA+AGG + chr1_2:73581288-73581307 None:intergenic 45.0%
GATGTCACTGTGAGATGCAT+TGG - chr1_2:73581545-73581564 Msa0091460:three_prime_UTR 45.0%
CAGAAAATGTGGGGGTGAAA+GGG + chr1_2:73581889-73581908 None:intergenic 45.0%
TCAGAAAATGTGGGGGTGAA+AGG + chr1_2:73581890-73581909 None:intergenic 45.0%
CCTGGAAGAATATCATGTGG+GGG - chr1_2:73582513-73582532 Msa0091460:intron 45.0%
! AGGGGTGAAAGTACATGTGT+CGG - chr1_2:73582639-73582658 Msa0091460:intron 45.0%
AAGTACATGTGTCGGGGTAT+AGG - chr1_2:73582647-73582666 Msa0091460:intron 45.0%
AGTACATGTGTCGGGGTATA+GGG - chr1_2:73582648-73582667 Msa0091460:intron 45.0%
!! CACATACTGGTTTGGATGTG+TGG - chr1_2:73582812-73582831 Msa0091460:intron 45.0%
!! GAGGCACTGCACTTAACATA+TGG - chr1_2:73583014-73583033 Msa0091460:three_prime_UTR 45.0%
ATACTGCACTTAATGGCCTC+TGG - chr1_2:73583275-73583294 Msa0091460:intron 45.0%
AAATAGGCGGTGAAGGTTAG+AGG + chr1_2:73583301-73583320 None:intergenic 45.0%
TTCTCGTTCTATGCAGGTCA+AGG - chr1_2:73583401-73583420 Msa0091460:three_prime_UTR 45.0%
TTCTGAACCTGCAAAGTTCG+TGG - chr1_2:73583641-73583660 Msa0091460:intron 45.0%
TTTAAATGTGAGCTTGGGGC+TGG - chr1_2:73583705-73583724 Msa0091460:intron 45.0%
!!! GCTGGACTTTTTTCGAAGTC+AGG - chr1_2:73583723-73583742 Msa0091460:intron 45.0%
GCTCAATGTTGGACAAATGC+AGG + chr1_2:73584241-73584260 None:intergenic 45.0%
TGTCCAACATTGAGCTCAAC+CGG - chr1_2:73584246-73584265 Msa0091460:intron 45.0%
CAAGGTTGCGTAACTAAGTC+CGG + chr1_2:73584268-73584287 None:intergenic 45.0%
TGAAACTGGAAACATCCCGT+GGG + chr1_2:73584612-73584631 None:intergenic 45.0%
TTGAAACTGGAAACATCCCG+TGG + chr1_2:73584613-73584632 None:intergenic 45.0%
! AGATCAAAAGGAGGCTTTGG+TGG - chr1_2:73585393-73585412 Msa0091460:intron 45.0%
! GATCAAAAGGAGGCTTTGGT+GGG - chr1_2:73585394-73585413 Msa0091460:intron 45.0%
! ATCAAAAGGAGGCTTTGGTG+GGG - chr1_2:73585395-73585414 Msa0091460:intron 45.0%
!! TGTCAAATGCGGTTGATGAG+TGG - chr1_2:73585536-73585555 Msa0091460:intron 45.0%
GTGTTGAGTGAGGATATGTG+GGG - chr1_2:73585625-73585644 Msa0091460:intron 45.0%
TGAGAATATGTGGAAGAGCC+CGG - chr1_2:73585669-73585688 Msa0091460:intron 45.0%
CCGTCAAAAGTGATAGCCTT+TGG - chr1_2:73585694-73585713 Msa0091460:intron 45.0%
CTCTAGTTGGAGCTCTATTG+AGG + chr1_2:73585732-73585751 None:intergenic 45.0%
! TGTTTGTCCTTTGGGAGTGT+TGG - chr1_2:73585923-73585942 Msa0091460:five_prime_UTR 45.0%
AGGGTGAACAAGGTTACGAA+GGG - chr1_2:73585958-73585977 Msa0091460:five_prime_UTR 45.0%
ACAAGGTTACGAAGGGTCTT+TGG - chr1_2:73585965-73585984 Msa0091460:five_prime_UTR 45.0%
!! TTAAAGTGTTGTCGTGGAGG+TGG - chr1_2:73586085-73586104 Msa0091460:five_prime_UTR 45.0%
GCTGTGTTCTTTGCTGAGTT+GGG - chr1_2:73586245-73586264 Msa0091460:five_prime_UTR 45.0%
TTTGCTTGTGGCCTTTGCTT+AGG - chr1_2:73586294-73586313 Msa0091460:five_prime_UTR 45.0%
!!! TGTTGGTGGGCTGTTTGTTT+TGG - chr1_2:73586372-73586391 Msa0091460:five_prime_UTR 45.0%
!!! GTTGGTGGGCTGTTTGTTTT+GGG - chr1_2:73586373-73586392 Msa0091460:five_prime_UTR 45.0%
!!! TTGGTGGGCTGTTTGTTTTG+GGG - chr1_2:73586374-73586393 Msa0091460:five_prime_UTR 45.0%
!!! GCTGTTTGTTTTGGGGTCAT+TGG - chr1_2:73586381-73586400 Msa0091460:five_prime_UTR 45.0%
!!! CATTGGTTTTGGCTGTTGTG+TGG - chr1_2:73586398-73586417 Msa0091460:five_prime_UTR 45.0%
!!! CAGGTTCTGGTTTTATTGGG+AGG - chr1_2:73586435-73586454 Msa0091460:five_prime_UTR 45.0%
!!! TGGTTTTTTGGTGTTGACGC+AGG - chr1_2:73586521-73586540 Msa0091460:five_prime_UTR 45.0%
!!! GGTTTTTTGGTGTTGACGCA+GGG - chr1_2:73586522-73586541 Msa0091460:five_prime_UTR 45.0%
!!! GTTTTTTGGTGTTGACGCAG+GGG - chr1_2:73586523-73586542 Msa0091460:five_prime_UTR 45.0%
!! ATTATTGTTAATTATTATTA+TGG - chr1_2:73577560-73577579 Msa0091460:intron 5.0%
!! TTATTGTTAATTATTATTAT+GGG - chr1_2:73577561-73577580 Msa0091460:intron 5.0%
!!! TTTTAAATAAAATAAAAACA+GGG + chr1_2:73579320-73579339 None:intergenic 5.0%
!!! ATTTTAAATAAAATAAAAAC+AGG + chr1_2:73579321-73579340 None:intergenic 5.0%
!!! TTAAGATTTTTTTTTAATTA+AGG + chr1_2:73580017-73580036 None:intergenic 5.0%
!! ATTACTATTATAATTATTAT+AGG - chr1_2:73580219-73580238 Msa0091460:intron 5.0%
!! ATAAAAAATTAATGTATAAA+AGG - chr1_2:73582573-73582592 Msa0091460:intron 5.0%
TGAACCCCACGCAAACATTG+AGG + chr1_2:73575898-73575917 None:intergenic 50.0%
TGGACCCCACACAAACATTG+AGG - chr1_2:73576022-73576041 Msa0091460:three_prime_UTR 50.0%
!! TGCCAACAGAGGCCTTGTTA+AGG + chr1_2:73576130-73576149 None:intergenic 50.0%
! GTCTCCTCGACTTGTGTAAC+AGG + chr1_2:73576188-73576207 None:intergenic 50.0%
TGGGAACTTTACCATTCCCC+CGG - chr1_2:73576322-73576341 Msa0091460:three_prime_UTR 50.0%
AAAAGCCGCTAAGCTAACCG+GGG + chr1_2:73576342-73576361 None:intergenic 50.0%
! CTTAGCGGCTTTTACCATGC+TGG - chr1_2:73576349-73576368 Msa0091460:three_prime_UTR 50.0%
AGGCTTGCAGTGGTTGACAA+TGG - chr1_2:73576511-73576530 Msa0091460:three_prime_UTR 50.0%
GGCTTGCAGTGGTTGACAAT+GGG - chr1_2:73576512-73576531 Msa0091460:three_prime_UTR 50.0%
GCTTGCAGTGGTTGACAATG+GGG - chr1_2:73576513-73576532 Msa0091460:three_prime_UTR 50.0%
CTTGCAGTGGTTGACAATGG+GGG - chr1_2:73576514-73576533 Msa0091460:three_prime_UTR 50.0%
!! TGCGGTTTGGATCGGTTTTG+AGG - chr1_2:73576702-73576721 Msa0091460:three_prime_UTR 50.0%
ACACCCCTAACTACAGCAGT+CGG - chr1_2:73577297-73577316 Msa0091460:intron 50.0%
CTTCCGACTGCTGTAGTTAG+GGG + chr1_2:73577303-73577322 None:intergenic 50.0%
GTGGATCCATTTCGCTACAG+AGG + chr1_2:73578020-73578039 None:intergenic 50.0%
! CGGAGATACGAAAGCACATC+CGG + chr1_2:73578131-73578150 None:intergenic 50.0%
TGTGCTTTCGTATCTCCGTC+AGG - chr1_2:73578133-73578152 Msa0091460:intron 50.0%
!! TACACCGATTCGGTCATGTC+AGG - chr1_2:73578164-73578183 Msa0091460:intron 50.0%
TCACAGTGTTGCAAGTTGCG+TGG + chr1_2:73578273-73578292 None:intergenic 50.0%
GAAGCTGAACCAGTTCGGTT+CGG + chr1_2:73578337-73578356 None:intergenic 50.0%
!! TCAAACCTTGAATGGGCTGG+TGG - chr1_2:73579479-73579498 Msa0091460:intron 50.0%
GGAGAATTTCCCACCTTGTC+AGG + chr1_2:73579545-73579564 None:intergenic 50.0%
CTTTATGGCTACGGGTCTTG+AGG - chr1_2:73580448-73580467 Msa0091460:intron 50.0%
ATAGCTCATATACGCGGAGG+TGG - chr1_2:73581052-73581071 Msa0091460:intron 50.0%
TATACGCGGAGGTGGTGAAA+TGG - chr1_2:73581060-73581079 Msa0091460:intron 50.0%
ATACGCGGAGGTGGTGAAAT+GGG - chr1_2:73581061-73581080 Msa0091460:intron 50.0%
GGAGGCAGTGGTATGAGAAT+GGG - chr1_2:73581083-73581102 Msa0091460:intron 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG - chr1_2:73581210-73581229 Msa0091460:intron 50.0%
! TGCTGTTGCCAGAGTACCTT+TGG - chr1_2:73581269-73581288 Msa0091460:three_prime_UTR 50.0%
! TGTTGCCAGAGTACCTTTGG+TGG - chr1_2:73581272-73581291 Msa0091460:three_prime_UTR 50.0%
TTCCTCTCACTACTTCCGAC+TGG - chr1_2:73581325-73581344 Msa0091460:three_prime_UTR 50.0%
TCCTCTCACTACTTCCGACT+GGG - chr1_2:73581326-73581345 Msa0091460:three_prime_UTR 50.0%
CCCCCACATGATATTCTTCC+AGG + chr1_2:73582516-73582535 None:intergenic 50.0%
! GGGGTGAAAGTACATGTGTC+GGG - chr1_2:73582640-73582659 Msa0091460:intron 50.0%
! GGGTGAAAGTACATGTGTCG+GGG - chr1_2:73582641-73582660 Msa0091460:intron 50.0%
CCAGGGATGTAGCTGTGATT+TGG + chr1_2:73582682-73582701 None:intergenic 50.0%
CCAAATCACAGCTACATCCC+TGG - chr1_2:73582679-73582698 Msa0091460:intron 50.0%
TGTAGGAATGGGGTGATCCT+AGG - chr1_2:73583194-73583213 Msa0091460:intron 50.0%
GAAACCAGCAGCATATACCC+TGG - chr1_2:73584025-73584044 Msa0091460:intron 50.0%
AGAACCAGGGTATATGCTGC+TGG + chr1_2:73584032-73584051 None:intergenic 50.0%
AGTCCGGTTGAGCTCAATGT+TGG + chr1_2:73584252-73584271 None:intergenic 50.0%
TTTCCTAGTTTGGCAGCACG+AGG - chr1_2:73584568-73584587 Msa0091460:five_prime_UTR 50.0%
! TCAAAAGGAGGCTTTGGTGG+GGG - chr1_2:73585396-73585415 Msa0091460:intron 50.0%
!! ATGCGGTTGATGAGTGGAGA+TGG - chr1_2:73585542-73585561 Msa0091460:intron 50.0%
!! TGCGGTTGATGAGTGGAGAT+GGG - chr1_2:73585543-73585562 Msa0091460:intron 50.0%
AGATGGGGGCTTGAAGATAG+TGG - chr1_2:73585559-73585578 Msa0091460:intron 50.0%
GATGGGGGCTTGAAGATAGT+GGG - chr1_2:73585560-73585579 Msa0091460:intron 50.0%
ATGGGGGCTTGAAGATAGTG+GGG - chr1_2:73585561-73585580 Msa0091460:intron 50.0%
GAGGAGAACTCTCCAACCAA+AGG + chr1_2:73585713-73585732 None:intergenic 50.0%
ACACAAAACGTCGACCCTTC+CGG + chr1_2:73585784-73585803 None:intergenic 50.0%
CATCACTCCAACACTCCCAA+AGG + chr1_2:73585933-73585952 None:intergenic 50.0%
!! CTTTGGGAGTGTTGGAGTGA+TGG - chr1_2:73585931-73585950 Msa0091460:five_prime_UTR 50.0%
GAGGGTGAACAAGGTTACGA+AGG - chr1_2:73585957-73585976 Msa0091460:five_prime_UTR 50.0%
GCCTTGACAGATAGTGCCTT+TGG - chr1_2:73586172-73586191 Msa0091460:five_prime_UTR 50.0%
!! GCCAAAGGCACTATCTGTCA+AGG + chr1_2:73586176-73586195 None:intergenic 50.0%
GAGGTCTGCTTTCAAGCTTC+TGG - chr1_2:73586218-73586237 Msa0091460:five_prime_UTR 50.0%
CTGCTTTCAAGCTTCTGGTG+CGG - chr1_2:73586223-73586242 Msa0091460:five_prime_UTR 50.0%
GGCTGTGTTCTTTGCTGAGT+TGG - chr1_2:73586244-73586263 Msa0091460:five_prime_UTR 50.0%
ATACCAGCACGCCTAAGCAA+AGG + chr1_2:73586308-73586327 None:intergenic 50.0%
TGTGGAGTTTGCCTCTTTGC+AGG - chr1_2:73586416-73586435 Msa0091460:five_prime_UTR 50.0%
GTTTGCCTCTTTGCAGGTTC+TGG - chr1_2:73586422-73586441 Msa0091460:five_prime_UTR 50.0%
AGCGTCAGTGCTATCAGCAT+AGG - chr1_2:73586473-73586492 Msa0091460:five_prime_UTR 50.0%
! AAGGGGTTTTTGTTCGAGCC+TGG - chr1_2:73586624-73586643 Msa0091460:five_prime_UTR 50.0%
GTTCGAGCCTGGTGATTGTA+TGG - chr1_2:73586635-73586654 Msa0091460:five_prime_UTR 50.0%
TCGGTTGCCATACAATCACC+AGG + chr1_2:73586645-73586664 None:intergenic 50.0%
! GAAGCACTAATAAGCTCGGG+TGG + chr1_2:73586691-73586710 None:intergenic 50.0%
ACTTGACCACGTGCCAACAG+AGG + chr1_2:73576141-73576160 None:intergenic 55.0%
!! CATTCCCCCGGTTAGCTTAG+CGG - chr1_2:73576334-73576353 Msa0091460:three_prime_UTR 55.0%
AAAGCCGCTAAGCTAACCGG+GGG + chr1_2:73576341-73576360 None:intergenic 55.0%
TGGTTGTCAAGCTGATCCGG+AGG - chr1_2:73576396-73576415 Msa0091460:three_prime_UTR 55.0%
GGGTAATTCCTCTGGACCTC+CGG + chr1_2:73576415-73576434 None:intergenic 55.0%
! CGAGAAGCATAGGCTTGCAG+TGG - chr1_2:73576501-73576520 Msa0091460:three_prime_UTR 55.0%
!! ACTACAGCTAGGGGTGTTCG+CGG - chr1_2:73576679-73576698 Msa0091460:three_prime_UTR 55.0%
!! CGGTTCGGTTTGGTTCGGTT+CGG - chr1_2:73577128-73577147 Msa0091460:three_prime_UTR 55.0%
AGCATCAGGTCCTGTAGGCA+TGG + chr1_2:73579157-73579176 None:intergenic 55.0%
!! ACATGCTCAGGAGGAGCATC+AGG + chr1_2:73579171-73579190 None:intergenic 55.0%
CATCACCACCAGCCCATTCA+AGG + chr1_2:73579487-73579506 None:intergenic 55.0%
CAGTGGGCACATGCTTCAGA+TGG - chr1_2:73580355-73580374 Msa0091460:intron 55.0%
CTGGGAGCTATGCATACCTG+TGG + chr1_2:73580983-73581002 None:intergenic 55.0%
TACGCGGAGGTGGTGAAATG+GGG - chr1_2:73581062-73581081 Msa0091460:intron 55.0%
GGGAGGCAGTGGTATGAGAA+TGG - chr1_2:73581082-73581101 Msa0091460:intron 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG - chr1_2:73581213-73581232 Msa0091460:intron 55.0%
TCCCAGTCGGAAGTAGTGAG+AGG + chr1_2:73581330-73581349 None:intergenic 55.0%
TCTCACTACTTCCGACTGGG+AGG - chr1_2:73581329-73581348 Msa0091460:three_prime_UTR 55.0%
GGAATGGGGTGATCCTAGGA+AGG - chr1_2:73583198-73583217 Msa0091460:intron 55.0%
ATGGGGTGATCCTAGGAAGG+AGG - chr1_2:73583201-73583220 Msa0091460:intron 55.0%
ACACCTTGCTGCACTCGCTA+GGG + chr1_2:73584294-73584313 None:intergenic 55.0%
AACACCTTGCTGCACTCGCT+AGG + chr1_2:73584295-73584314 None:intergenic 55.0%
TAGCGAGTGCAGCAAGGTGT+TGG - chr1_2:73584294-73584313 Msa0091460:intron 55.0%
CATCCTCGTGCTGCCAAACT+AGG + chr1_2:73584574-73584593 None:intergenic 55.0%
CTAGTTTGGCAGCACGAGGA+TGG - chr1_2:73584572-73584591 Msa0091460:five_prime_UTR 55.0%
CTGGAAACATCCCGTGGGAA+AGG + chr1_2:73584607-73584626 None:intergenic 55.0%
!! GCGGTTGATGAGTGGAGATG+GGG - chr1_2:73585544-73585563 Msa0091460:intron 55.0%
!! CGGTTGATGAGTGGAGATGG+GGG - chr1_2:73585545-73585564 Msa0091460:intron 55.0%
GAGTGAGGATATGTGGGGAG+AGG - chr1_2:73585630-73585649 Msa0091460:intron 55.0%
TGAGGATATGTGGGGAGAGG+CGG - chr1_2:73585633-73585652 Msa0091460:intron 55.0%
ATGTGGGGAGAGGCGGAAAA+AGG - chr1_2:73585640-73585659 Msa0091460:intron 55.0%
!! CTATCACTTTTGACGGGGCC+GGG + chr1_2:73585690-73585709 None:intergenic 55.0%
!! GCTATCACTTTTGACGGGGC+CGG + chr1_2:73585691-73585710 None:intergenic 55.0%
AGGAACGTGTTACCACCGGA+AGG - chr1_2:73585766-73585785 Msa0091460:intron 55.0%
GGAACGTGTTACCACCGGAA+GGG - chr1_2:73585767-73585786 Msa0091460:intron 55.0%
GCATTGTGACGTTGCGCACT+TGG - chr1_2:73585846-73585865 Msa0091460:intron 55.0%
!! TGGGAGTGTTGGAGTGATGG+TGG - chr1_2:73585934-73585953 Msa0091460:five_prime_UTR 55.0%
!! GGGAGTGTTGGAGTGATGGT+GGG - chr1_2:73585935-73585954 Msa0091460:five_prime_UTR 55.0%
!! AGTGTTGGAGTGATGGTGGG+AGG - chr1_2:73585938-73585957 Msa0091460:five_prime_UTR 55.0%
!! GTGTTGGAGTGATGGTGGGA+GGG - chr1_2:73585939-73585958 Msa0091460:five_prime_UTR 55.0%
!! TGATGGTGGGAGGGTGAACA+AGG - chr1_2:73585948-73585967 Msa0091460:five_prime_UTR 55.0%
AGTGCCTTTGGCAGTGAGAG+CGG - chr1_2:73586184-73586203 Msa0091460:five_prime_UTR 55.0%
CAAACCGCTCTCACTGCCAA+AGG + chr1_2:73586191-73586210 None:intergenic 55.0%
! TGCTGGCCTGCTGTTTGTGT+TGG - chr1_2:73586355-73586374 Msa0091460:five_prime_UTR 55.0%
! TGGCCTGCTGTTTGTGTTGG+TGG - chr1_2:73586358-73586377 Msa0091460:five_prime_UTR 55.0%
! GGCCTGCTGTTTGTGTTGGT+GGG - chr1_2:73586359-73586378 Msa0091460:five_prime_UTR 55.0%
AGCCCACCAACACAAACAGC+AGG + chr1_2:73586364-73586383 None:intergenic 55.0%
TGCTTCTTGCACGGGCTTGT+CGG - chr1_2:73586705-73586724 Msa0091460:five_prime_UTR 55.0%
ACAAGGCCTCTGTTGGCACG+TGG - chr1_2:73576132-73576151 Msa0091460:three_prime_UTR 60.0%
CGCTAAGCTAACCGGGGGAA+TGG + chr1_2:73576336-73576355 None:intergenic 60.0%
AAGCTGATCCGGAGGTCCAG+AGG - chr1_2:73576404-73576423 Msa0091460:three_prime_UTR 60.0%
! GTTCGCGGTGCGGTTTGGAT+CGG - chr1_2:73576694-73576713 Msa0091460:three_prime_UTR 60.0%
! TCAAGGGCACATGGTCAGCG+AGG - chr1_2:73577366-73577385 Msa0091460:intron 60.0%
! CAAGGGCACATGGTCAGCGA+GGG - chr1_2:73577367-73577386 Msa0091460:intron 60.0%
ACACTTGCTCTGCCTGGACC+TGG - chr1_2:73577901-73577920 Msa0091460:intron 60.0%
CTCTCGGAATCGCTCCGATC+CGG - chr1_2:73578109-73578128 Msa0091460:intron 60.0%
!! GGAGGAGCATCAGGTCCTGT+AGG + chr1_2:73579162-73579181 None:intergenic 60.0%
GTGGTGAAATGGGGAGGCAG+TGG - chr1_2:73581071-73581090 Msa0091460:intron 60.0%
CGGTGAAGGTTAGAGGCCAG+AGG + chr1_2:73583294-73583313 None:intergenic 60.0%
CTGCACTCGCTAGGGTCACA+AGG + chr1_2:73584286-73584305 None:intergenic 60.0%
TGACCCTAGCGAGTGCAGCA+AGG - chr1_2:73584288-73584307 Msa0091460:intron 60.0%
! GGAGTGCTCAGCCTTTCCCA+CGG - chr1_2:73584593-73584612 Msa0091460:five_prime_UTR 60.0%
GAGTGCTCAGCCTTTCCCAC+GGG - chr1_2:73584594-73584613 Msa0091460:five_prime_UTR 60.0%
! AAAGGAGGCTTTGGTGGGGG+AGG - chr1_2:73585399-73585418 Msa0091460:intron 60.0%
! AGGCTTTGGTGGGGGAGGTT+GGG - chr1_2:73585404-73585423 Msa0091460:intron 60.0%
CCAACTCACATCCTCCTCCG+AGG + chr1_2:73585434-73585453 None:intergenic 60.0%
CCTCGGAGGAGGATGTGAGT+TGG - chr1_2:73585431-73585450 Msa0091460:intron 60.0%
CAAAACGTCGACCCTTCCGG+TGG + chr1_2:73585781-73585800 None:intergenic 60.0%
! GTGACGTTGCGCACTTGGTG+TGG - chr1_2:73585851-73585870 Msa0091460:intron 60.0%
GTTGTCGTGGAGGTGGCTGT+TGG - chr1_2:73586092-73586111 Msa0091460:five_prime_UTR 60.0%
CGTGGAGGTGGCTGTTGGAA+AGG - chr1_2:73586097-73586116 Msa0091460:five_prime_UTR 60.0%
! GGCAGTGAGAGCGGTTTGCT+TGG - chr1_2:73586193-73586212 Msa0091460:five_prime_UTR 60.0%
! GAGAGCGGTTTGCTTGGCTG+AGG - chr1_2:73586199-73586218 Msa0091460:five_prime_UTR 60.0%
GGATTGTGCAGCAGCTGCTG+CGG - chr1_2:73586266-73586285 Msa0091460:five_prime_UTR 60.0%
GATTGTGCAGCAGCTGCTGC+GGG - chr1_2:73586267-73586286 Msa0091460:five_prime_UTR 60.0%
GCTGCGGGTGTGTTTGCTTG+TGG - chr1_2:73586282-73586301 Msa0091460:five_prime_UTR 60.0%
TGGCCTTTGCTTAGGCGTGC+TGG - chr1_2:73586302-73586321 Msa0091460:five_prime_UTR 60.0%
!! AGCTAGGGGTGTTCGCGGTG+CGG - chr1_2:73576684-73576703 Msa0091460:three_prime_UTR 65.0%
GGCACATGGTCAGCGAGGGT+GGG - chr1_2:73577371-73577390 Msa0091460:intron 65.0%
GCGGAGGTGGTGAAATGGGG+AGG - chr1_2:73581065-73581084 Msa0091460:intron 65.0%
! GAGGCTTTGGTGGGGGAGGT+TGG - chr1_2:73585403-73585422 Msa0091460:intron 65.0%
! GGCTTTGGTGGGGGAGGTTG+GGG - chr1_2:73585405-73585424 Msa0091460:intron 65.0%
TGGGACTGGGGTCTGCTTGC+TGG - chr1_2:73586338-73586357 Msa0091460:five_prime_UTR 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr1_2:73576689-73576708 Msa0091460:three_prime_UTR 70.0%
GGGCACATGGTCAGCGAGGG+TGG - chr1_2:73577370-73577389 Msa0091460:intron 70.0%
GGGGGAGGTTGGGGTTGCCT+CGG - chr1_2:73585414-73585433 Msa0091460:intron 70.0%
GGAGGTTGGGGTTGCCTCGG+AGG - chr1_2:73585417-73585436 Msa0091460:intron 70.0%
GGTTGGGGTTGCCTCGGAGG+AGG - chr1_2:73585420-73585439 Msa0091460:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 73575820 73586744 73575820 ID=Msa0091460;Name=Msa0091460
chr1_2 mRNA 73575820 73586744 73575820 ID=Msa0091460-mRNA-1;Parent=Msa0091460;Name=Msa0091460-mRNA-1;_AED=0.13;_eAED=0.13;_QI=1732|1|1|1|0.55|0.4|10|2421|60
chr1_2 exon 73575820 73577169 73575820 ID=Msa0091460-mRNA-1:exon:25861;Parent=Msa0091460-mRNA-1
chr1_2 exon 73578816 73578939 73578816 ID=Msa0091460-mRNA-1:exon:25860;Parent=Msa0091460-mRNA-1
chr1_2 exon 73579099 73579147 73579099 ID=Msa0091460-mRNA-1:exon:25859;Parent=Msa0091460-mRNA-1
chr1_2 exon 73579300 73579365 73579300 ID=Msa0091460-mRNA-1:exon:25858;Parent=Msa0091460-mRNA-1
chr1_2 exon 73581214 73581578 73581214 ID=Msa0091460-mRNA-1:exon:25857;Parent=Msa0091460-mRNA-1
chr1_2 exon 73582095 73582251 73582095 ID=Msa0091460-mRNA-1:exon:25856;Parent=Msa0091460-mRNA-1
chr1_2 exon 73583014 73583208 73583014 ID=Msa0091460-mRNA-1:exon:25855;Parent=Msa0091460-mRNA-1
chr1_2 exon 73583313 73583603 73583313 ID=Msa0091460-mRNA-1:exon:25854;Parent=Msa0091460-mRNA-1
chr1_2 exon 73584379 73585251 73584379 ID=Msa0091460-mRNA-1:exon:25853;Parent=Msa0091460-mRNA-1
chr1_2 exon 73585879 73586744 73585879 ID=Msa0091460-mRNA-1:exon:25852;Parent=Msa0091460-mRNA-1
chr1_2 five_prime_UTR 73585879 73586744 73585879 ID=Msa0091460-mRNA-1:five_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 five_prime_UTR 73584386 73585251 73584386 ID=Msa0091460-mRNA-1:five_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 CDS 73584379 73584385 73584379 ID=Msa0091460-mRNA-1:cds;Parent=Msa0091460-mRNA-1
chr1_2 CDS 73583428 73583603 73583428 ID=Msa0091460-mRNA-1:cds;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73583313 73583427 73583313 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73583014 73583208 73583014 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73582095 73582251 73582095 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73581214 73581578 73581214 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73579300 73579365 73579300 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73579099 73579147 73579099 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73578816 73578939 73578816 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
chr1_2 three_prime_UTR 73575820 73577169 73575820 ID=Msa0091460-mRNA-1:three_prime_utr;Parent=Msa0091460-mRNA-1
Gene Sequence

>Msa0091460

ATGTCAGGAACCAAGCAATTTGAAGATAGGCTTTTTGCTGAGATAAGAGGAAGGATAAAGGAGGAAGATATAACTGCACCTGTACGCAAAGGGTCGTATTACTATTATACGAAAAATTTGGAAGGGAAGGAGTATGTTCAACATTGTAGACGCCGTATATCCGATAACCAAAAGGTTCCATGA
Protein sequence

>Msa0091460

MSGTKQFEDRLFAEIRGRIKEEDITAPVRKGSYYYYTKNLEGKEYVQHCRRRISDNQKVP*