Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711450 | RHN53259.1 | 97.769 | 493 | 11 | 0 | 1 | 493 | 1 | 493 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711450 | sp|Q0WQG8|GTG2_ARATH | 83.974 | 468 | 74 | 1 | 1 | 468 | 1 | 467 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711450 | A0A396HIW2 | 97.769 | 493 | 11 | 0 | 1 | 493 | 1 | 493 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0711450 | 0.820179 | 7.865891e-53 | -8.615850e-47 |
| Msa0011170 | Msa0711450 | 0.809886 | 1.515734e-50 | -8.615850e-47 |
| Msa0020930 | Msa0711450 | 0.840395 | 8.921548e-58 | -8.615850e-47 |
| Msa0021510 | Msa0711450 | 0.802527 | 5.379134e-49 | -8.615850e-47 |
| Msa0026910 | Msa0711450 | 0.825782 | 3.885437e-54 | -8.615850e-47 |
| Msa0027600 | Msa0711450 | 0.805050 | 1.609579e-49 | -8.615850e-47 |
| Msa0027890 | Msa0711450 | 0.807718 | 4.408694e-50 | -8.615850e-47 |
| Msa0031340 | Msa0711450 | 0.816574 | 5.155612e-52 | -8.615850e-47 |
| Msa0032470 | Msa0711450 | 0.868491 | 6.275850e-66 | -8.615850e-47 |
| Msa0034110 | Msa0711450 | 0.844331 | 8.077037e-59 | -8.615850e-47 |
| Msa0036140 | Msa0711450 | 0.850210 | 1.967136e-60 | -8.615850e-47 |
| Msa0037570 | Msa0711450 | -0.846539 | 2.038484e-59 | -8.615850e-47 |
| Msa0043980 | Msa0711450 | 0.835340 | 1.776603e-56 | -8.615850e-47 |
| Msa0044260 | Msa0711450 | 0.868445 | 6.497017e-66 | -8.615850e-47 |
| Msa0044330 | Msa0711450 | 0.864794 | 9.411972e-65 | -8.615850e-47 |
| Msa0045790 | Msa0711450 | 0.814782 | 1.293009e-51 | -8.615850e-47 |
| Msa0046160 | Msa0711450 | 0.819935 | 8.940967e-53 | -8.615850e-47 |
| Msa0062490 | Msa0711450 | 0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa0065680 | Msa0711450 | -0.815930 | 7.180888e-52 | -8.615850e-47 |
| Msa0068680 | Msa0711450 | 0.822976 | 1.775762e-53 | -8.615850e-47 |
| Msa0071250 | Msa0711450 | 0.807987 | 3.864165e-50 | -8.615850e-47 |
| Msa0075360 | Msa0711450 | 0.813137 | 2.980529e-51 | -8.615850e-47 |
| Msa0076320 | Msa0711450 | 0.811301 | 7.495835e-51 | -8.615850e-47 |
| Msa0079070 | Msa0711450 | 0.829449 | 5.114913e-55 | -8.615850e-47 |
| Msa0083280 | Msa0711450 | 0.847971 | 8.249277e-60 | -8.615850e-47 |
| Msa0084080 | Msa0711450 | 0.831279 | 1.826201e-55 | -8.615850e-47 |
| Msa0084380 | Msa0711450 | 0.807020 | 6.199151e-50 | -8.615850e-47 |
| Msa0086420 | Msa0711450 | 0.815461 | 9.138176e-52 | -8.615850e-47 |
| Msa0090100 | Msa0711450 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0091460 | Msa0711450 | 0.802161 | 6.398199e-49 | -8.615850e-47 |
| Msa0095560 | Msa0711450 | 0.805710 | 1.170572e-49 | -8.615850e-47 |
| Msa0096030 | Msa0711450 | 0.816220 | 6.186997e-52 | -8.615850e-47 |
| Msa0100960 | Msa0711450 | 0.810695 | 1.014406e-50 | -8.615850e-47 |
| Msa0101270 | Msa0711450 | 0.818154 | 2.272936e-52 | -8.615850e-47 |
| Msa0104230 | Msa0711450 | 0.835347 | 1.768811e-56 | -8.615850e-47 |
| Msa0104240 | Msa0711450 | 0.813974 | 1.950505e-51 | -8.615850e-47 |
| Msa0106850 | Msa0711450 | 0.833398 | 5.457601e-56 | -8.615850e-47 |
| Msa0114060 | Msa0711450 | 0.856688 | 2.717123e-62 | -8.615850e-47 |
| Msa0616160 | Msa0711450 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0618970 | Msa0711450 | 0.812817 | 3.502803e-51 | -8.615850e-47 |
| Msa0620460 | Msa0711450 | 0.836772 | 7.693243e-57 | -8.615850e-47 |
| Msa0621790 | Msa0711450 | 0.826122 | 3.225518e-54 | -8.615850e-47 |
| Msa0624060 | Msa0711450 | 0.817589 | 3.048993e-52 | -8.615850e-47 |
| Msa0637900 | Msa0711450 | 0.802641 | 5.095703e-49 | -8.615850e-47 |
| Msa0642730 | Msa0711450 | 0.839337 | 1.682784e-57 | -8.615850e-47 |
| Msa0658890 | Msa0711450 | 0.818862 | 1.570338e-52 | -8.615850e-47 |
| Msa0662340 | Msa0711450 | 0.806769 | 7.004023e-50 | -8.615850e-47 |
| Msa0663240 | Msa0711450 | 0.821609 | 3.686028e-53 | -8.615850e-47 |
| Msa0667050 | Msa0711450 | 0.800579 | 1.349033e-48 | -8.615850e-47 |
| Msa0667770 | Msa0711450 | 0.832095 | 1.149032e-55 | -8.615850e-47 |
| Msa0667790 | Msa0711450 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0672690 | Msa0711450 | 0.820779 | 5.726387e-53 | -8.615850e-47 |
| Msa0673630 | Msa0711450 | 0.822123 | 2.803540e-53 | -8.615850e-47 |
| Msa0676130 | Msa0711450 | 0.818423 | 1.975711e-52 | -8.615850e-47 |
| Msa0676180 | Msa0711450 | 0.821133 | 4.747025e-53 | -8.615850e-47 |
| Msa0680480 | Msa0711450 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0688390 | Msa0711450 | 0.839282 | 1.739438e-57 | -8.615850e-47 |
| Msa0688480 | Msa0711450 | 0.838757 | 2.379172e-57 | -8.615850e-47 |
| Msa0689250 | Msa0711450 | 0.802704 | 4.945509e-49 | -8.615850e-47 |
| Msa0698400 | Msa0711450 | 0.801187 | 1.013283e-48 | -8.615850e-47 |
| Msa0703780 | Msa0711450 | 0.809315 | 2.010383e-50 | -8.615850e-47 |
| Msa0707250 | Msa0711450 | 0.821683 | 3.544970e-53 | -8.615850e-47 |
| Msa0709400 | Msa0711450 | 0.828286 | 9.784092e-55 | -8.615850e-47 |
| Msa0711100 | Msa0711450 | 0.839991 | 1.137518e-57 | -8.615850e-47 |
| Msa0711150 | Msa0711450 | 0.809507 | 1.828298e-50 | -8.615850e-47 |
| Msa0711450 | Msa0717890 | 0.822632 | 2.135238e-53 | -8.615850e-47 |
| Msa0711450 | Msa0738030 | 0.800518 | 1.387881e-48 | -8.615850e-47 |
| Msa0711450 | Msa0740510 | 0.841442 | 4.740069e-58 | -8.615850e-47 |
| Msa0711450 | Msa0741440 | 0.845623 | 3.617623e-59 | -8.615850e-47 |
| Msa0711450 | Msa0749440 | 0.817178 | 3.772209e-52 | -8.615850e-47 |
| Msa0711450 | Msa0750850 | 0.844322 | 8.121216e-59 | -8.615850e-47 |
| Msa0711450 | Msa0751850 | 0.830069 | 3.613932e-55 | -8.615850e-47 |
| Msa0711450 | Msa0752000 | 0.810312 | 1.227175e-50 | -8.615850e-47 |
| Msa0711450 | Msa0756990 | 0.822408 | 2.407435e-53 | -8.615850e-47 |
| Msa0711450 | Msa0760130 | 0.811434 | 7.014354e-51 | -8.615850e-47 |
| Msa0711450 | Msa0765000 | 0.800056 | 1.723318e-48 | -8.615850e-47 |
| Msa0711450 | Msa0779690 | 0.815173 | 1.058522e-51 | -8.615850e-47 |
| Msa0711450 | Msa0784480 | 0.822970 | 1.781705e-53 | -8.615850e-47 |
| Msa0711450 | Msa0795720 | 0.821415 | 4.086552e-53 | -8.615850e-47 |
| Msa0711450 | Msa0796250 | 0.805715 | 1.167725e-49 | -8.615850e-47 |
| Msa0711450 | Msa0802010 | 0.830119 | 3.513082e-55 | -8.615850e-47 |
| Msa0711450 | Msa0817460 | 0.811673 | 6.225378e-51 | -8.615850e-47 |
| Msa0711450 | Msa0818060 | 0.826573 | 2.519624e-54 | -8.615850e-47 |
| Msa0711450 | Msa0820770 | 0.845130 | 4.920819e-59 | -8.615850e-47 |
| Msa0711450 | Msa0820850 | 0.822033 | 2.940991e-53 | -8.615850e-47 |
| Msa0711450 | Msa0822500 | 0.832772 | 7.811974e-56 | -8.615850e-47 |
| Msa0711450 | Msa0827350 | -0.803133 | 4.031553e-49 | -8.615850e-47 |
| Msa0711450 | Msa0830230 | 0.806124 | 9.579649e-50 | -8.615850e-47 |
| Msa0711450 | Msa0831110 | 0.809275 | 2.050412e-50 | -8.615850e-47 |
| Msa0711450 | Msa0831850 | 0.813375 | 2.642580e-51 | -8.615850e-47 |
| Msa0711450 | Msa0832150 | 0.867154 | 1.686148e-65 | -8.615850e-47 |
| Msa0711450 | Msa0832340 | 0.819569 | 1.084417e-52 | -8.615850e-47 |
| Msa0711450 | Msa0833460 | 0.820195 | 7.798254e-53 | -8.615850e-47 |
| Msa0711450 | Msa0835800 | 0.836258 | 1.039787e-56 | -8.615850e-47 |
| Msa0711450 | Msa0836610 | 0.820535 | 6.516504e-53 | -8.615850e-47 |
| Msa0711450 | Msa0858390 | 0.822688 | 2.071635e-53 | -8.615850e-47 |
| Msa0711450 | Msa0861090 | 0.844407 | 7.707308e-59 | -8.615850e-47 |
| Msa0711450 | Msa0861130 | 0.808339 | 3.252153e-50 | -8.615850e-47 |
| Msa0711450 | Msa0861470 | 0.813479 | 2.506410e-51 | -8.615850e-47 |
| Msa0711450 | Msa0861570 | 0.810738 | 9.930048e-51 | -8.615850e-47 |
| Msa0711450 | Msa0878220 | 0.856947 | 2.279579e-62 | -8.615850e-47 |
| Msa0711450 | Msa0880950 | 0.816724 | 4.771869e-52 | -8.615850e-47 |
| Msa0711450 | Msa0894710 | 0.807450 | 5.025968e-50 | -8.615850e-47 |
| Msa0711450 | Msa0895120 | 0.823712 | 1.195215e-53 | -8.615850e-47 |
| Msa0711450 | Msa0902830 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
| Msa0711450 | Msa0924310 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0711450 | Msa0928130 | 0.813498 | 2.482590e-51 | -8.615850e-47 |
| Msa0711450 | Msa0931520 | 0.802537 | 5.351834e-49 | -8.615850e-47 |
| Msa0711450 | Msa0943970 | 0.853474 | 2.333615e-61 | -8.615850e-47 |
| Msa0711450 | Msa0944020 | 0.824011 | 1.016880e-53 | -8.615850e-47 |
| Msa0711450 | Msa0945970 | 0.809324 | 2.001799e-50 | -8.615850e-47 |
| Msa0711450 | Msa0946280 | -0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa0711450 | Msa0964310 | 0.804267 | 2.345310e-49 | -8.615850e-47 |
| Msa0711450 | Msa0966060 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0711450 | Msa1001390 | 0.813368 | 2.651263e-51 | -8.615850e-47 |
| Msa0711450 | Msa1002850 | 0.852285 | 5.105055e-61 | -8.615850e-47 |
| Msa0711450 | Msa1016910 | 0.847149 | 1.388525e-59 | -8.615850e-47 |
| Msa0711450 | Msa1024700 | 0.804730 | 1.877445e-49 | -8.615850e-47 |
| Msa0711450 | Msa1032770 | 0.823595 | 1.272758e-53 | -8.615850e-47 |
| Msa0711450 | Msa1033400 | 0.821897 | 3.163019e-53 | -8.615850e-47 |
| Msa0711450 | Msa1034150 | 0.806876 | 6.647684e-50 | -8.615850e-47 |
| Msa0711450 | Msa1035480 | 0.829782 | 4.245860e-55 | -8.615850e-47 |
| Msa0711450 | Msa1035960 | 0.819211 | 1.308367e-52 | -8.615850e-47 |
| Msa0711450 | Msa1036610 | 0.854047 | 1.596143e-61 | -8.615850e-47 |
| Msa0711450 | Msa1046280 | 0.813919 | 2.005779e-51 | -8.615850e-47 |
| Msa0711450 | Msa1048220 | 0.812461 | 4.191656e-51 | -8.615850e-47 |
| Msa0711450 | Msa1058170 | 0.849934 | 2.349994e-60 | -8.615850e-47 |
| Msa0711450 | Msa1068600 | 0.816697 | 4.837766e-52 | -8.615850e-47 |
| Msa0711450 | Msa1071320 | 0.813332 | 2.700448e-51 | -8.615850e-47 |
| Msa0711450 | Msa1073080 | 0.835298 | 1.820289e-56 | -8.615850e-47 |
| Msa0711450 | Msa1075650 | 0.813443 | 2.553180e-51 | -8.615850e-47 |
| Msa0711450 | Msa1077130 | 0.800596 | 1.337912e-48 | -8.615850e-47 |
| Msa0711450 | Msa1079430 | 0.809923 | 1.488569e-50 | -8.615850e-47 |
| Msa0711450 | Msa1081790 | -0.806893 | 6.594908e-50 | -8.615850e-47 |
| Msa0711450 | Msa1082500 | 0.807308 | 5.385887e-50 | -8.615850e-47 |
| Msa0711450 | Msa1083300 | 0.824987 | 5.991564e-54 | -8.615850e-47 |
| Msa0711450 | Msa1089460 | 0.813525 | 2.448692e-51 | -8.615850e-47 |
| Msa0711450 | Msa1101090 | 0.823409 | 1.406871e-53 | -8.615850e-47 |
| Msa0711450 | Msa1102790 | 0.835283 | 1.836134e-56 | -8.615850e-47 |
| Msa0711450 | Msa1104560 | 0.824629 | 7.275958e-54 | -8.615850e-47 |
| Msa0711450 | Msa1109680 | 0.800316 | 1.526014e-48 | -8.615850e-47 |
| Msa0711450 | Msa1117780 | 0.829210 | 5.847089e-55 | -8.615850e-47 |
| Msa0711450 | Msa1119090 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
| Msa0711450 | Msa1124960 | 0.828997 | 6.584647e-55 | -8.615850e-47 |
| Msa0711450 | Msa1128060 | 0.820497 | 6.647948e-53 | -8.615850e-47 |
| Msa0711450 | Msa1148090 | 0.815871 | 7.402613e-52 | -8.615850e-47 |
| Msa0711450 | Msa1152440 | 0.812016 | 5.240930e-51 | -8.615850e-47 |
| Msa0711450 | Msa1162780 | 0.813323 | 2.712517e-51 | -8.615850e-47 |
| Msa0711450 | Msa1163730 | 0.803743 | 3.013987e-49 | -8.615850e-47 |
| Msa0711450 | Msa1167340 | 0.812498 | 4.112711e-51 | -8.615850e-47 |
| Msa0711450 | Msa1173340 | 0.820537 | 6.507833e-53 | -8.615850e-47 |
| Msa0711450 | Msa1176720 | 0.833620 | 4.803793e-56 | -8.615850e-47 |
| Msa0711450 | Msa1179630 | 0.829464 | 5.071846e-55 | -8.615850e-47 |
| Msa0711450 | Msa1181250 | 0.803222 | 3.863696e-49 | -8.615850e-47 |
| Msa0711450 | Msa1181910 | 0.808186 | 3.504980e-50 | -8.615850e-47 |
| Msa0711450 | Msa1204530 | 0.848808 | 4.838849e-60 | -8.615850e-47 |
| Msa0711450 | Msa1204630 | 0.835501 | 1.617505e-56 | -8.615850e-47 |
| Msa0711450 | Msa1207310 | 0.847695 | 9.826658e-60 | -8.615850e-47 |
| Msa0711450 | Msa1213980 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0711450 | Msa1225130 | 0.829692 | 4.464088e-55 | -8.615850e-47 |
| Msa0711450 | Msa1228590 | 0.837203 | 5.971357e-57 | -8.615850e-47 |
| Msa0711450 | Msa1231840 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa0711450 | Msa1232700 | 0.823438 | 1.385105e-53 | -8.615850e-47 |
| Msa0711450 | Msa1244720 | -0.824708 | 6.974163e-54 | -8.615850e-47 |
| Msa0711450 | Msa1246360 | 0.815469 | 9.096990e-52 | -8.615850e-47 |
| Msa0711450 | Msa1246510 | 0.816276 | 6.010989e-52 | -8.615850e-47 |
| Msa0711450 | Msa1255330 | 0.819510 | 1.118455e-52 | -8.615850e-47 |
| Msa0711450 | Msa1257750 | 0.808026 | 3.790204e-50 | -8.615850e-47 |
| Msa0711450 | Msa1271130 | 0.800463 | 1.424419e-48 | -8.615850e-47 |
| Msa0711450 | Msa1275050 | 0.817129 | 3.869357e-52 | -8.615850e-47 |
| Msa0711450 | Msa1279400 | 0.803734 | 3.026159e-49 | -8.615850e-47 |
| Msa0711450 | Msa1280320 | 0.807600 | 4.669735e-50 | -8.615850e-47 |
| Msa0711450 | Msa1295950 | 0.813798 | 2.132687e-51 | -8.615850e-47 |
| Msa0711450 | Msa1296280 | 0.818150 | 2.277176e-52 | -8.615850e-47 |
| Msa0711450 | Msa1296760 | 0.822516 | 2.271893e-53 | -8.615850e-47 |
| Msa0711450 | Msa1305810 | 0.823998 | 1.023822e-53 | -8.615850e-47 |
| Msa0711450 | Msa1306560 | 0.830216 | 3.326713e-55 | -8.615850e-47 |
| Msa0711450 | Msa1306840 | 0.801310 | 9.562227e-49 | -8.615850e-47 |
| Msa0711450 | Msa1308870 | 0.818321 | 2.083682e-52 | -8.615850e-47 |
| Msa0711450 | Msa1313280 | 0.812522 | 4.063474e-51 | -8.615850e-47 |
| Msa0711450 | Msa1329200 | 0.802985 | 4.326547e-49 | -8.615850e-47 |
| Msa0711450 | Msa1331000 | 0.837103 | 6.331858e-57 | -8.615850e-47 |
| Msa0711450 | Msa1331320 | 0.866566 | 2.597198e-65 | -8.615850e-47 |
| Msa0711450 | Msa1335540 | 0.848645 | 5.372073e-60 | -8.615850e-47 |
| Msa0711450 | Msa1341950 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa0711450 | Msa1346840 | 0.861639 | 8.909858e-64 | -8.615850e-47 |
| Msa0711450 | Msa1347760 | 0.804485 | 2.112302e-49 | -8.615850e-47 |
| Msa0711450 | Msa1348890 | 0.812210 | 4.754065e-51 | -8.615850e-47 |
| Msa0711450 | Msa1353980 | 0.824643 | 7.221488e-54 | -8.615850e-47 |
| Msa0711450 | Msa1355890 | 0.800790 | 1.221547e-48 | -8.615850e-47 |
| Msa0711450 | Msa1358500 | 0.842015 | 3.346638e-58 | -8.615850e-47 |
| Msa0711450 | Msa1360440 | 0.806367 | 8.512848e-50 | -8.615850e-47 |
| Msa0711450 | Msa1371940 | 0.814365 | 1.599062e-51 | -8.615850e-47 |
| Msa0711450 | Msa1372150 | 0.802351 | 5.845458e-49 | -8.615850e-47 |
| Msa0711450 | Msa1373030 | 0.801862 | 7.371178e-49 | -8.615850e-47 |
| Msa0711450 | Msa1374470 | 0.824161 | 9.377508e-54 | -8.615850e-47 |
| Msa0711450 | Msa1375380 | 0.828186 | 1.033964e-54 | -8.615850e-47 |
| Msa0711450 | Msa1376130 | 0.806029 | 1.003291e-49 | -8.615850e-47 |
| Msa0711450 | Msa1377570 | 0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0711450 | Msa1378410 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0711450 | Msa1380900 | 0.822454 | 2.348168e-53 | -8.615850e-47 |
| Msa0711450 | Msa1382790 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa0711450 | Msa1392700 | 0.801511 | 8.700711e-49 | -8.615850e-47 |
| Msa0711450 | Msa1392790 | 0.808862 | 2.513678e-50 | -8.615850e-47 |
| Msa0711450 | Msa1393570 | 0.807929 | 3.975410e-50 | -8.615850e-47 |
| Msa0711450 | Msa1394380 | 0.828636 | 8.054492e-55 | -8.615850e-47 |
| Msa0711450 | Msa1397120 | 0.806394 | 8.404620e-50 | -8.615850e-47 |
| Msa0711450 | Msa1400870 | -0.803899 | 2.797095e-49 | -8.615850e-47 |
| Msa0711450 | Msa1401990 | 0.870369 | 1.537129e-66 | -8.615850e-47 |
| Msa0711450 | Msa1403890 | 0.804114 | 2.523382e-49 | -8.615850e-47 |
| Msa0711450 | Msa1404300 | 0.845544 | 3.801322e-59 | -8.615850e-47 |
| Msa0711450 | Msa1407800 | 0.811812 | 5.806301e-51 | -8.615850e-47 |
| Msa0711450 | Msa1409700 | 0.813503 | 2.476227e-51 | -8.615850e-47 |
| Msa0711450 | Msa1410550 | 0.805924 | 1.055129e-49 | -8.615850e-47 |
| Msa0711450 | Msa1411020 | 0.826349 | 2.849123e-54 | -8.615850e-47 |
| Msa0711450 | Msa1412130 | 0.804031 | 2.625845e-49 | -8.615850e-47 |
| Msa0711450 | Msa1412640 | 0.831950 | 1.248492e-55 | -8.615850e-47 |
| Msa0711450 | Msa1412890 | 0.824650 | 7.196862e-54 | -8.615850e-47 |
| Msa0711450 | Msa1418850 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0711450 | Msa1419690 | 0.856960 | 2.259487e-62 | -8.615850e-47 |
| Msa0711450 | Msa1420490 | 0.819578 | 1.079199e-52 | -8.615850e-47 |
| Msa0711450 | Msa1423390 | 0.823553 | 1.302204e-53 | -8.615850e-47 |
| Msa0711450 | Msa1424290 | 0.825432 | 4.703583e-54 | -8.615850e-47 |
| Msa0711450 | Msa1424450 | 0.804312 | 2.294887e-49 | -8.615850e-47 |
| Msa0711450 | Msa1425260 | 0.824986 | 5.995155e-54 | -8.615850e-47 |
| Msa0711450 | Msa1432130 | 0.800641 | 1.310505e-48 | -8.615850e-47 |
| Msa0711450 | Msa1434350 | 0.827240 | 1.744798e-54 | -8.615850e-47 |
| Msa0711450 | Msa1435270 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa0711450 | Msa1436480 | 0.822527 | 2.258152e-53 | -8.615850e-47 |
| Msa0711450 | Msa1436650 | 0.800872 | 1.175289e-48 | -8.615850e-47 |
| Msa0711450 | Msa1437770 | 0.804471 | 2.126641e-49 | -8.615850e-47 |
| Msa0711450 | Msa1439320 | 0.824623 | 7.300852e-54 | -8.615850e-47 |
| Msa0711450 | Msa1440370 | 0.819352 | 1.214823e-52 | -8.615850e-47 |
| Msa0711450 | Msa1440810 | 0.822444 | 2.360859e-53 | -8.615850e-47 |
| Msa0711450 | Msa1440950 | 0.800557 | 1.362660e-48 | -8.615850e-47 |
| Msa0711450 | Msa1445390 | -0.809173 | 2.156297e-50 | -8.615850e-47 |
| Msa0711450 | Msa1448560 | 0.851303 | 9.687016e-61 | -8.615850e-47 |
| Msa0711450 | Msa1449340 | -0.820536 | 6.512168e-53 | -8.615850e-47 |
| Msa0711450 | Msa1460050 | 0.878158 | 3.522326e-69 | -8.615850e-47 |
| Msa0711450 | Msa1462290 | 0.804433 | 2.165576e-49 | -8.615850e-47 |
| Msa0711450 | Msa1463900 | 0.848291 | 6.731195e-60 | -8.615850e-47 |
| Msa0711450 | Msa1464810 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
| Msa0127650 | Msa0711450 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0129190 | Msa0711450 | -0.805809 | 1.115577e-49 | -8.615850e-47 |
| Msa0137730 | Msa0711450 | 0.839177 | 1.851488e-57 | -8.615850e-47 |
| Msa0138020 | Msa0711450 | 0.831307 | 1.797773e-55 | -8.615850e-47 |
| Msa0140100 | Msa0711450 | 0.804543 | 2.054418e-49 | -8.615850e-47 |
| Msa0140500 | Msa0711450 | -0.812192 | 4.796892e-51 | -8.615850e-47 |
| Msa0145580 | Msa0711450 | 0.801923 | 7.159191e-49 | -8.615850e-47 |
| Msa0148080 | Msa0711450 | 0.809976 | 1.450046e-50 | -8.615850e-47 |
| Msa0154840 | Msa0711450 | -0.805264 | 1.451769e-49 | -8.615850e-47 |
| Msa0159930 | Msa0711450 | 0.839988 | 1.139575e-57 | -8.615850e-47 |
| Msa0160960 | Msa0711450 | 0.800125 | 1.668843e-48 | -8.615850e-47 |
| Msa0167980 | Msa0711450 | 0.800814 | 1.207742e-48 | -8.615850e-47 |
| Msa0174110 | Msa0711450 | 0.824430 | 8.104653e-54 | -8.615850e-47 |
| Msa0175540 | Msa0711450 | 0.816364 | 5.745293e-52 | -8.615850e-47 |
| Msa0178570 | Msa0711450 | 0.802704 | 4.943435e-49 | -8.615850e-47 |
| Msa0186950 | Msa0711450 | 0.830087 | 3.578314e-55 | -8.615850e-47 |
| Msa0189320 | Msa0711450 | 0.843971 | 1.009074e-58 | -8.615850e-47 |
| Msa0207040 | Msa0711450 | -0.802070 | 6.679344e-49 | -8.615850e-47 |
| Msa0211150 | Msa0711450 | 0.811918 | 5.505485e-51 | -8.615850e-47 |
| Msa0212990 | Msa0711450 | 0.817864 | 2.643694e-52 | -8.615850e-47 |
| Msa0217680 | Msa0711450 | 0.830360 | 3.068595e-55 | -8.615850e-47 |
| Msa0219590 | Msa0711450 | 0.828948 | 6.767523e-55 | -8.615850e-47 |
| Msa0220580 | Msa0711450 | 0.811837 | 5.732770e-51 | -8.615850e-47 |
| Msa0221470 | Msa0711450 | 0.825435 | 4.693904e-54 | -8.615850e-47 |
| Msa0225220 | Msa0711450 | 0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa0231060 | Msa0711450 | 0.845222 | 4.644934e-59 | -8.615850e-47 |
| Msa0376910 | Msa0711450 | 0.820582 | 6.355934e-53 | -8.615850e-47 |
| Msa0383800 | Msa0711450 | 0.829830 | 4.133212e-55 | -8.615850e-47 |
| Msa0388280 | Msa0711450 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa0398670 | Msa0711450 | 0.858974 | 5.699684e-63 | -8.615850e-47 |
| Msa0412840 | Msa0711450 | 0.804241 | 2.373850e-49 | -8.615850e-47 |
| Msa0417330 | Msa0711450 | 0.808007 | 3.826196e-50 | -8.615850e-47 |
| Msa0434180 | Msa0711450 | 0.817125 | 3.877679e-52 | -8.615850e-47 |
| Msa0436760 | Msa0711450 | 0.821122 | 4.775659e-53 | -8.615850e-47 |
| Msa0440750 | Msa0711450 | 0.808444 | 3.087639e-50 | -8.615850e-47 |
| Msa0442610 | Msa0711450 | 0.804600 | 1.998216e-49 | -8.615850e-47 |
| Msa0452710 | Msa0711450 | 0.823095 | 1.665267e-53 | -8.615850e-47 |
| Msa0457960 | Msa0711450 | 0.802598 | 5.200400e-49 | -8.615850e-47 |
| Msa0460130 | Msa0711450 | 0.814996 | 1.159028e-51 | -8.615850e-47 |
| Msa0464100 | Msa0711450 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0468270 | Msa0711450 | 0.812515 | 4.078959e-51 | -8.615850e-47 |
| Msa0468320 | Msa0711450 | 0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0471670 | Msa0711450 | 0.807903 | 4.026785e-50 | -8.615850e-47 |
| Msa0471900 | Msa0711450 | 0.818720 | 1.692056e-52 | -8.615850e-47 |
| Msa0477080 | Msa0711450 | 0.800882 | 1.169734e-48 | -8.615850e-47 |
| Msa0479170 | Msa0711450 | 0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0240920 | Msa0711450 | 0.818647 | 1.757696e-52 | -8.615850e-47 |
| Msa0241140 | Msa0711450 | 0.844917 | 5.617619e-59 | -8.615850e-47 |
| Msa0257500 | Msa0711450 | 0.823986 | 1.030812e-53 | -8.615850e-47 |
| Msa0257520 | Msa0711450 | 0.807489 | 4.930381e-50 | -8.615850e-47 |
| Msa0260680 | Msa0711450 | 0.807845 | 4.143023e-50 | -8.615850e-47 |
| Msa0261090 | Msa0711450 | 0.801511 | 8.699731e-49 | -8.615850e-47 |
| Msa0270580 | Msa0711450 | 0.833988 | 3.886109e-56 | -8.615850e-47 |
| Msa0270960 | Msa0711450 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0271510 | Msa0711450 | 0.845087 | 5.054126e-59 | -8.615850e-47 |
| Msa0278580 | Msa0711450 | 0.819997 | 8.657296e-53 | -8.615850e-47 |
| Msa0280090 | Msa0711450 | 0.818175 | 2.248636e-52 | -8.615850e-47 |
| Msa0280230 | Msa0711450 | 0.812089 | 5.052248e-51 | -8.615850e-47 |
| Msa0285330 | Msa0711450 | 0.806047 | 9.941506e-50 | -8.615850e-47 |
| Msa0287410 | Msa0711450 | 0.825656 | 4.161518e-54 | -8.615850e-47 |
| Msa0305410 | Msa0711450 | 0.827915 | 1.201441e-54 | -8.615850e-47 |
| Msa0309770 | Msa0711450 | 0.826519 | 2.595358e-54 | -8.615850e-47 |
| Msa0314070 | Msa0711450 | 0.811005 | 8.692734e-51 | -8.615850e-47 |
| Msa0316390 | Msa0711450 | 0.818527 | 1.870811e-52 | -8.615850e-47 |
| Msa0317940 | Msa0711450 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
| Msa0318680 | Msa0711450 | 0.840734 | 7.273794e-58 | -8.615850e-47 |
| Msa0318980 | Msa0711450 | 0.800391 | 1.473024e-48 | -8.615850e-47 |
| Msa0325830 | Msa0711450 | 0.809347 | 1.979000e-50 | -8.615850e-47 |
| Msa0326110 | Msa0711450 | 0.802452 | 5.573850e-49 | -8.615850e-47 |
| Msa0330340 | Msa0711450 | 0.814740 | 1.320719e-51 | -8.615850e-47 |
| Msa0342010 | Msa0711450 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
| Msa0342410 | Msa0711450 | 0.803291 | 3.739644e-49 | -8.615850e-47 |
| Msa0343850 | Msa0711450 | 0.805082 | 1.585179e-49 | -8.615850e-47 |
| Msa0345970 | Msa0711450 | 0.801450 | 8.951471e-49 | -8.615850e-47 |
| Msa0484720 | Msa0711450 | 0.834093 | 3.658013e-56 | -8.615850e-47 |
| Msa0493630 | Msa0711450 | 0.805105 | 1.567178e-49 | -8.615850e-47 |
| Msa0518380 | Msa0711450 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0532980 | Msa0711450 | 0.824196 | 9.200351e-54 | -8.615850e-47 |
| Msa0545210 | Msa0711450 | 0.806633 | 7.482105e-50 | -8.615850e-47 |
| Msa0550010 | Msa0711450 | 0.816507 | 5.336191e-52 | -8.615850e-47 |
| Msa0564140 | Msa0711450 | 0.805731 | 1.158516e-49 | -8.615850e-47 |
| Msa0566310 | Msa0711450 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0566350 | Msa0711450 | 0.803017 | 4.260251e-49 | -8.615850e-47 |
| Msa0566750 | Msa0711450 | 0.807467 | 4.983955e-50 | -8.615850e-47 |
| Msa0567350 | Msa0711450 | 0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0571630 | Msa0711450 | 0.807856 | 4.120195e-50 | -8.615850e-47 |
| Msa0574390 | Msa0711450 | 0.834939 | 2.241948e-56 | -8.615850e-47 |
| Msa0585230 | Msa0711450 | 0.808982 | 2.369781e-50 | -8.615850e-47 |
| Msa0602390 | Msa0711450 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711450 | MtrunA17_Chr5g0393971 | 97.769 | 493 | 11 | 0 | 1 | 493 | 1 | 493 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0711450 | AT4G27630.2 | 83.974 | 468 | 74 | 1 | 1 | 468 | 1 | 467 | 0.0 | 761 |
| Msa0711450 | AT1G64990.1 | 82.692 | 468 | 81 | 0 | 1 | 468 | 1 | 468 | 0.0 | 759 |
| Msa0711450 | AT1G64990.2 | 82.692 | 468 | 81 | 0 | 1 | 468 | 1 | 468 | 0.0 | 759 |
| Msa0711450 | AT4G27630.3 | 79.878 | 492 | 74 | 2 | 1 | 468 | 1 | 491 | 0.0 | 747 |
| Msa0711450 | AT4G27630.7 | 81.551 | 374 | 68 | 1 | 1 | 374 | 1 | 373 | 0.0 | 632 |
| Msa0711450 | AT4G27630.4 | 81.551 | 374 | 68 | 1 | 1 | 374 | 1 | 373 | 0.0 | 630 |
| Msa0711450 | AT4G27630.6 | 85.366 | 328 | 48 | 0 | 141 | 468 | 21 | 348 | 0.0 | 521 |
| Msa0711450 | AT4G27630.1 | 85.366 | 328 | 48 | 0 | 141 | 468 | 21 | 348 | 0.0 | 521 |
| Msa0711450 | AT4G27630.5 | 82.051 | 234 | 42 | 0 | 141 | 374 | 21 | 254 | 6.51e-134 | 390 |
Find 121 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGGATGTTTATCAATT+TGG | 0.155871 | 5_1:-3342840 | None:intergenic |
| TCACATTGACAATTATTTAA+AGG | 0.188036 | 5_1:+3343687 | Msa0711450:three_prime_UTR |
| ATTCTGTTTGATACTGTTAT+TGG | 0.235327 | 5_1:+3336877 | Msa0711450:CDS |
| GCTTTCAAAGCAATTGTTCT+TGG | 0.239320 | 5_1:+3339053 | Msa0711450:CDS |
| ATATTTCCCGGCAGCAAATT+TGG | 0.268611 | 5_1:-3343338 | None:intergenic |
| AATTTGGTCCTCGTTGTTAA+AGG | 0.273017 | 5_1:-3343322 | None:intergenic |
| ATGGCTGTTCTATCTGGTTT+TGG | 0.288518 | 5_1:+3337112 | Msa0711450:CDS |
| ACCGGTGATAAAAGTCAAAT+TGG | 0.292591 | 5_1:-3342747 | None:intergenic |
| ACTGTCATGGCTGTTCTATC+TGG | 0.294941 | 5_1:+3337106 | Msa0711450:CDS |
| ATCAAGTAACAATGATAATA+AGG | 0.302602 | 5_1:-3336911 | None:intergenic |
| CCAATGCCATCACCTGATAA+AGG | 0.308808 | 5_1:+3337034 | Msa0711450:CDS |
| GACACTAACCTGAGATAATA+AGG | 0.315088 | 5_1:-3340326 | None:intergenic |
| TAGAAACTATACATGTATAT+AGG | 0.338300 | 5_1:-3342997 | None:intergenic |
| TGCTGCCGGGAAATATTTGC+AGG | 0.348392 | 5_1:+3343345 | Msa0711450:three_prime_UTR |
| GATTATCATTACAGAGGTAT+TGG | 0.353524 | 5_1:+3342714 | Msa0711450:CDS |
| GCACATACTGCCAAGTCTAT+TGG | 0.358239 | 5_1:+3343214 | Msa0711450:CDS |
| ATCTAGCGTTGTTTCGAAAT+CGG | 0.359999 | 5_1:+3336499 | Msa0711450:five_prime_UTR |
| TTAAGACTGTAATTATCTAA+TGG | 0.364897 | 5_1:-3336452 | None:intergenic |
| CCTCAATTGGTCAGTAGAAT+TGG | 0.365468 | 5_1:+3337070 | Msa0711450:CDS |
| AACACACTTATACCTGTATT+CGG | 0.368811 | 5_1:-3342038 | None:intergenic |
| GTTAGGATGGGTTGGGGAAG+AGG | 0.370065 | 5_1:+3336544 | Msa0711450:exon |
| CACTTGGTTGGGCAGGTGTT+TGG | 0.371948 | 5_1:+3336605 | Msa0711450:CDS |
| TTTCTTTACTATGCCTCAAT+TGG | 0.379528 | 5_1:+3337057 | Msa0711450:CDS |
| GAAAATTATTCTCGCTCAAA+TGG | 0.382660 | 5_1:+3337255 | Msa0711450:CDS |
| GAAACTAACCTTGCTCCTTC+TGG | 0.382664 | 5_1:-3337621 | None:intergenic |
| AGAAACTATACATGTATATA+GGG | 0.386494 | 5_1:-3342996 | None:intergenic |
| AAGTTTGTGTTCACTTGGTT+GGG | 0.388000 | 5_1:+3336594 | Msa0711450:CDS |
| TTGGAAGGTTCAGTTGTGTT+AGG | 0.389903 | 5_1:+3336571 | Msa0711450:CDS |
| GAAGTTTGTGTTCACTTGGT+TGG | 0.392795 | 5_1:+3336593 | Msa0711450:CDS |
| ATTATCATTACAGAGGTATT+GGG | 0.393721 | 5_1:+3342715 | Msa0711450:CDS |
| TCTTGGTGTTAGGATGGGTT+GGG | 0.396451 | 5_1:+3336537 | Msa0711450:exon |
| TTCTCATTGATGATCTCTTC+CGG | 0.407244 | 5_1:-3343159 | None:intergenic |
| CTGCTGCATATTCTCGAACT+TGG | 0.408126 | 5_1:+3339331 | Msa0711450:CDS |
| GCATAATATCAATTTACAAA+AGG | 0.410480 | 5_1:-3343442 | None:intergenic |
| ATAGTAAAGAAACCTTTATC+AGG | 0.415101 | 5_1:-3337046 | None:intergenic |
| CGGTTGATTTCAGTTTGGTT+CGG | 0.422332 | 5_1:-3343275 | None:intergenic |
| ATTTGGTCCTCGTTGTTAAA+GGG | 0.426086 | 5_1:-3343321 | None:intergenic |
| CTCCTTCTGGTCCTCTTGCA+CGG | 0.431487 | 5_1:-3337608 | None:intergenic |
| GTCAGTAGAATTGGTGTCAT+TGG | 0.434768 | 5_1:+3337079 | Msa0711450:CDS |
| GAGTGATCGATCTTGGTGTT+AGG | 0.435022 | 5_1:+3336527 | Msa0711450:five_prime_UTR |
| CATAATATCAATTTACAAAA+GGG | 0.436626 | 5_1:-3343441 | None:intergenic |
| GGGTTGGGGAAGAGGAATCT+TGG | 0.438549 | 5_1:+3336552 | Msa0711450:CDS |
| GTGAACTTTAAAAGTAGGTT+CGG | 0.441147 | 5_1:-3343295 | None:intergenic |
| ATGGTCCTGCAAATATTTCC+CGG | 0.445847 | 5_1:-3343350 | None:intergenic |
| TCTTTCCAAGGCCTTGATCT+CGG | 0.449342 | 5_1:-3337191 | None:intergenic |
| TATATTTCCTTGCTATTCAT+CGG | 0.456786 | 5_1:+3341246 | Msa0711450:CDS |
| GGAAACCGAGATCAAGGCCT+TGG | 0.464243 | 5_1:+3337186 | Msa0711450:CDS |
| AAATGCAGCCTTATTATCTC+AGG | 0.465152 | 5_1:+3340318 | Msa0711450:CDS |
| ATTCTTAACAAATTTAATGA+AGG | 0.466176 | 5_1:+3341296 | Msa0711450:CDS |
| AAAGCTTAGCAACCGAATAC+AGG | 0.469068 | 5_1:+3342026 | Msa0711450:CDS |
| AATACGTTTGATAAAAGATC+TGG | 0.470086 | 5_1:-3337566 | None:intergenic |
| AGGCATGGAAGCAGAGGTAC+TGG | 0.470967 | 5_1:+3339020 | Msa0711450:CDS |
| ATCTTGGTGTTAGGATGGGT+TGG | 0.472515 | 5_1:+3336536 | Msa0711450:exon |
| GGAATCAGAGTGATCGATCT+TGG | 0.479602 | 5_1:+3336520 | Msa0711450:five_prime_UTR |
| GGACATATGCAGAATCTACT+AGG | 0.481782 | 5_1:+3339357 | Msa0711450:CDS |
| GGTTTGTGAACTTTAAAAGT+AGG | 0.482311 | 5_1:-3343300 | None:intergenic |
| GACATACTCTTTAGAGAGGA+TGG | 0.483171 | 5_1:-3336749 | None:intergenic |
| TTGTGTGTATAAAATGATCA+AGG | 0.483771 | 5_1:+3339398 | Msa0711450:CDS |
| GATCGATCTTGGTGTTAGGA+TGG | 0.484139 | 5_1:+3336531 | Msa0711450:exon |
| TTGTGTTCACTTGGTTGGGC+AGG | 0.487039 | 5_1:+3336598 | Msa0711450:CDS |
| CTTGCTATTCATCGGAATGT+TGG | 0.489185 | 5_1:+3341254 | Msa0711450:CDS |
| CCTTTATCAGGTGATGGCAT+TGG | 0.491266 | 5_1:-3337034 | None:intergenic |
| TTAAATAATTGTCAATGTGA+AGG | 0.493347 | 5_1:-3343684 | None:intergenic |
| AAGAGTGATAAATAACTGTA+TGG | 0.498599 | 5_1:-3337148 | None:intergenic |
| GATTGAGGAAACCGAGATCA+AGG | 0.500784 | 5_1:+3337180 | Msa0711450:CDS |
| ATAGGGCAAGAGTTGTGAAC+TGG | 0.500826 | 5_1:+3336843 | Msa0711450:intron |
| AAGTTACACTCACAATCAAT+TGG | 0.502259 | 5_1:-3342856 | None:intergenic |
| CTGCATAAGTTGTCTTTCCA+AGG | 0.506266 | 5_1:-3337203 | None:intergenic |
| AGATACAATGCAATATAATA+CGG | 0.512261 | 5_1:-3343619 | None:intergenic |
| GCTGTTTCAAGAGTTGGAAG+TGG | 0.519122 | 5_1:+3341926 | Msa0711450:CDS |
| ACTCTTCATCAGAGAGATTG+AGG | 0.519209 | 5_1:+3337165 | Msa0711450:CDS |
| AATGCGCAGATAGTAAAAGT+AGG | 0.522155 | 5_1:-3342807 | None:intergenic |
| AGGTTCGGTTGATTTCAGTT+TGG | 0.526179 | 5_1:-3343280 | None:intergenic |
| TGTCATTGGTGTTACTGTCA+TGG | 0.534360 | 5_1:+3337093 | Msa0711450:CDS |
| CCAATTCTACTGACCAATTG+AGG | 0.538924 | 5_1:-3337070 | None:intergenic |
| GTGGTTTGATGCAATATTTG+TGG | 0.542218 | 5_1:+3342768 | Msa0711450:CDS |
| TTAGGAAGTTTGTGTTCACT+TGG | 0.543040 | 5_1:+3336589 | Msa0711450:CDS |
| CTATGAGCTTCGACAAGCAA+AGG | 0.544516 | 5_1:+3339080 | Msa0711450:CDS |
| TACTTGATGCTTAAAAGCAG+TGG | 0.544743 | 5_1:+3336926 | Msa0711450:CDS |
| CTATTGGAATATCCATGTCT+AGG | 0.545109 | 5_1:+3343230 | Msa0711450:CDS |
| AAAATATGTTCCCATTATCT+CGG | 0.545480 | 5_1:-3341978 | None:intergenic |
| CATGGATATTCCAATAGACT+TGG | 0.545545 | 5_1:-3343224 | None:intergenic |
| ACGAGGACCAAATTTGCTGC+CGG | 0.548053 | 5_1:+3343331 | Msa0711450:three_prime_UTR |
| TATTCTCGCTCAAATGGAGA+TGG | 0.549765 | 5_1:+3337261 | Msa0711450:CDS |
| ATTGTATCTTCAGACTTCAC+AGG | 0.551705 | 5_1:+3343633 | Msa0711450:three_prime_UTR |
| CGAGGACCAAATTTGCTGCC+GGG | 0.553919 | 5_1:+3343332 | Msa0711450:three_prime_UTR |
| ATGCGCAGATAGTAAAAGTA+GGG | 0.557128 | 5_1:-3342806 | None:intergenic |
| AAGAAACCTTTATCAGGTGA+TGG | 0.558347 | 5_1:-3337040 | None:intergenic |
| CTTGGTGTTAGGATGGGTTG+GGG | 0.562766 | 5_1:+3336538 | Msa0711450:exon |
| AGAACTGAAAGAGCTGCACT+TGG | 0.565424 | 5_1:+3336953 | Msa0711450:CDS |
| TGCAATATAATACGGATACA+TGG | 0.565878 | 5_1:-3343611 | None:intergenic |
| ATACTTATCATCCTTGTCAC+GGG | 0.571650 | 5_1:-3340268 | None:intergenic |
| ATCGATCTTGGTGTTAGGAT+GGG | 0.572234 | 5_1:+3336532 | Msa0711450:exon |
| CTTATGCAGTCAATTGAGAC+TGG | 0.572440 | 5_1:+3337217 | Msa0711450:CDS |
| GGGTCTAAGTTGTGTTGTGT+TGG | 0.574357 | 5_1:+3343541 | Msa0711450:three_prime_UTR |
| GCATATTCTCGAACTTGGAA+AGG | 0.574715 | 5_1:+3339336 | Msa0711450:CDS |
| ATGTGAAGATATCAAAGGCA+TGG | 0.581837 | 5_1:+3339005 | Msa0711450:intron |
| GTTGAATGTGAAGATATCAA+AGG | 0.586462 | 5_1:+3339000 | Msa0711450:intron |
| TATACTTATCATCCTTGTCA+CGG | 0.589557 | 5_1:-3340269 | None:intergenic |
| CAGATAGTAAAAGTAGGGAA+AGG | 0.591096 | 5_1:-3342801 | None:intergenic |
| CAAGAGGACCAGAAGGAGCA+AGG | 0.594045 | 5_1:+3337613 | Msa0711450:CDS |
| AGTTGTTCGATCCGTGCAAG+AGG | 0.594350 | 5_1:+3337597 | Msa0711450:CDS |
| TGCTGACTAGAAATTCATAC+CGG | 0.595756 | 5_1:+3343140 | Msa0711450:CDS |
| ACATACTCTTTAGAGAGGAT+GGG | 0.598774 | 5_1:-3336748 | None:intergenic |
| TTAGACCCGTAAATAAAACT+AGG | 0.601286 | 5_1:-3343526 | None:intergenic |
| TAAAATGTTTCGTCAAACAA+TGG | 0.606340 | 5_1:-3343369 | None:intergenic |
| CAAATATTGCATCAAACCAC+CGG | 0.610784 | 5_1:-3342765 | None:intergenic |
| TATCAAAGGCATGGAAGCAG+AGG | 0.616520 | 5_1:+3339014 | Msa0711450:CDS |
| GGAAGAGATCATCAATGAGA+AGG | 0.619170 | 5_1:+3343161 | Msa0711450:CDS |
| ATCCGTGCAAGAGGACCAGA+AGG | 0.621117 | 5_1:+3337606 | Msa0711450:CDS |
| GTTCAGTTGATCCCGTGACA+AGG | 0.624543 | 5_1:+3340257 | Msa0711450:CDS |
| CAACATTCCGATGAATAGCA+AGG | 0.630088 | 5_1:-3341253 | None:intergenic |
| GAACAAGCAAGGATCTGAAG+AGG | 0.635624 | 5_1:+3337285 | Msa0711450:CDS |
| ATGGAGATGGAGAACAAGCA+AGG | 0.635747 | 5_1:+3337274 | Msa0711450:CDS |
| AAATGACATACTCTTTAGAG+AGG | 0.641736 | 5_1:-3336753 | None:intergenic |
| ATCATTACAGAGGTATTGGG+CGG | 0.644393 | 5_1:+3342718 | Msa0711450:CDS |
| ATAGTTTCTACTGCAACGAA+AGG | 0.645020 | 5_1:+3343010 | Msa0711450:CDS |
| TGGGGAAGAGGAATCTTGGA+AGG | 0.674682 | 5_1:+3336556 | Msa0711450:CDS |
| TGACAGGATTATCATTACAG+AGG | 0.676858 | 5_1:+3342708 | Msa0711450:intron |
| TTGGTTGTGATATCAGTGCG+TGG | 0.694691 | 5_1:+3341273 | Msa0711450:CDS |
| TCACAAACCCTTTAACAACG+AGG | 0.764309 | 5_1:+3343314 | Msa0711450:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAATTTGTTGTAATA+GGG | + | chr5_1:3336826-3336845 | Msa0711450:intron | 10.0% |
| !! | AATATCAAATAGAAAAAAAT+AGG | - | chr5_1:3341360-3341379 | None:intergenic | 10.0% |
| !! | AAAAGAATAAAATATGATAT+AGG | + | chr5_1:3341499-3341518 | Msa0711450:intron | 10.0% |
| !! | AAAGAAAATTATTGAATATA+AGG | + | chr5_1:3341657-3341676 | Msa0711450:intron | 10.0% |
| !! | AATCAATTAATCAATCAATT+AGG | - | chr5_1:3336794-3336813 | None:intergenic | 15.0% |
| !!! | GATAATTAATTTGTTGTAAT+AGG | + | chr5_1:3336825-3336844 | Msa0711450:intron | 15.0% |
| !! | AATAAAACCTATAAAGAAAA+TGG | - | chr5_1:3337483-3337502 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGCTAGATTA+AGG | + | chr5_1:3339451-3339470 | Msa0711450:intron | 15.0% |
| !! | AATATATTGCTAATTGTATT+AGG | + | chr5_1:3339642-3339661 | Msa0711450:intron | 15.0% |
| !! | TGGAAAAAAGTAATTATATT+TGG | - | chr5_1:3340171-3340190 | None:intergenic | 15.0% |
| !! | ATATTTATCCTAATCAATTT+AGG | - | chr5_1:3340517-3340536 | None:intergenic | 15.0% |
| !! | TATAAACAAAAAGAATTCTT+AGG | - | chr5_1:3340875-3340894 | None:intergenic | 15.0% |
| !!! | TTATCATTATTTTTTACCTT+AGG | + | chr5_1:3341018-3341037 | Msa0711450:intron | 15.0% |
| !! | ATTCTTAACAAATTTAATGA+AGG | + | chr5_1:3341296-3341315 | Msa0711450:CDS | 15.0% |
| !!! | AATATTTTAATTGATATGCA+TGG | + | chr5_1:3342193-3342212 | Msa0711450:intron | 15.0% |
| !!! | TAAATTTATTTGATAACTGA+TGG | + | chr5_1:3343085-3343104 | Msa0711450:intron | 15.0% |
| !! | AAATGAAAAACAATATTAAC+AGG | + | chr5_1:3343401-3343420 | Msa0711450:three_prime_UTR | 15.0% |
| !! | AATGAAAAACAATATTAACA+GGG | + | chr5_1:3343402-3343421 | Msa0711450:three_prime_UTR | 15.0% |
| !! | CATAATATCAATTTACAAAA+GGG | - | chr5_1:3343444-3343463 | None:intergenic | 15.0% |
| !!! | TTTTAACCTAGTTTTATTTA+CGG | + | chr5_1:3343520-3343539 | Msa0711450:three_prime_UTR | 15.0% |
| !!! | ATACACAATTTTAGAAATAT+AGG | - | chr5_1:3343591-3343610 | None:intergenic | 15.0% |
| !! | TTAAGACTGTAATTATCTAA+TGG | - | chr5_1:3336455-3336474 | None:intergenic | 20.0% |
| !! | ATCAATCAATTAGGTTAATA+AGG | - | chr5_1:3336785-3336804 | None:intergenic | 20.0% |
| !! | ATCAAGTAACAATGATAATA+AGG | - | chr5_1:3336914-3336933 | None:intergenic | 20.0% |
| !! | AATTATATTGACATTTCCTT+TGG | + | chr5_1:3337389-3337408 | Msa0711450:intron | 20.0% |
| !! | TATTAAAATTGTGAAACCAA+AGG | - | chr5_1:3337408-3337427 | None:intergenic | 20.0% |
| !!! | AAAATTTATATCTCTAAAGC+AGG | - | chr5_1:3337677-3337696 | None:intergenic | 20.0% |
| !!! | TGCTTTAGAGATATAAATTT+TGG | + | chr5_1:3337676-3337695 | Msa0711450:intron | 20.0% |
| !! | ATGATAGTACAAATATTCAA+AGG | + | chr5_1:3337999-3338018 | Msa0711450:intron | 20.0% |
| !! | GAATTTAGTACAATGTTTAA+TGG | + | chr5_1:3338042-3338061 | Msa0711450:intron | 20.0% |
| !!! | AAGTTTTCCTTTTTCTTTAT+TGG | + | chr5_1:3338701-3338720 | Msa0711450:intron | 20.0% |
| !! | TGAATATCCAATAAAGAAAA+AGG | - | chr5_1:3338711-3338730 | None:intergenic | 20.0% |
| !! | GAAACATATAAATTGAGAAA+TGG | - | chr5_1:3338747-3338766 | None:intergenic | 20.0% |
| !!! | ATGTTTCCTTTTTATCAAAA+TGG | + | chr5_1:3338760-3338779 | Msa0711450:intron | 20.0% |
| !!! | TGTTTCCTTTTTATCAAAAT+GGG | + | chr5_1:3338761-3338780 | Msa0711450:intron | 20.0% |
| !! | TGAAGTGATTCATTTAATAA+TGG | + | chr5_1:3338894-3338913 | Msa0711450:intron | 20.0% |
| !!! | CTATTTTCCAGTTTTTTTAA+AGG | - | chr5_1:3339147-3339166 | None:intergenic | 20.0% |
| !!! | CATTTTATACACACAATAAA+CGG | - | chr5_1:3339394-3339413 | None:intergenic | 20.0% |
| !! | AAAATTTACTGTAGTCAATA+TGG | + | chr5_1:3340057-3340076 | Msa0711450:intron | 20.0% |
| !! | TCTTTAAATAAGAATGCATT+AGG | - | chr5_1:3340395-3340414 | None:intergenic | 20.0% |
| !! | AGCAACAAAAAAGAAATTTA+AGG | - | chr5_1:3340614-3340633 | None:intergenic | 20.0% |
| !!! | AATACATATTGGAAGTTTTA+AGG | + | chr5_1:3341445-3341464 | Msa0711450:intron | 20.0% |
| !!! | TTCTTTTGTTTTATTTAAGC+TGG | - | chr5_1:3341804-3341823 | None:intergenic | 20.0% |
| !!! | TATCTTCTATTCTTTTAATC+AGG | + | chr5_1:3342002-3342021 | Msa0711450:CDS | 20.0% |
| !! | AAATCAGAAATACTGAATTT+AGG | + | chr5_1:3342241-3342260 | Msa0711450:intron | 20.0% |
| !! | TATTATTCATATATTGTCTC+CGG | - | chr5_1:3342289-3342308 | None:intergenic | 20.0% |
| !! | GAGACAATATATGAATAATA+GGG | + | chr5_1:3342289-3342308 | Msa0711450:intron | 20.0% |
| !! | TAGATATAAATAGGATTGAA+AGG | - | chr5_1:3342498-3342517 | None:intergenic | 20.0% |
| !! | CTGAATGTATAGATATAAAT+AGG | - | chr5_1:3342507-3342526 | None:intergenic | 20.0% |
| !! | TGTTTATTTCAATGTAAAAC+AGG | + | chr5_1:3342962-3342981 | Msa0711450:intron | 20.0% |
| !! | AGAAACTATACATGTATATA+GGG | - | chr5_1:3342999-3343018 | None:intergenic | 20.0% |
| !! | TAGAAACTATACATGTATAT+AGG | - | chr5_1:3343000-3343019 | None:intergenic | 20.0% |
| !! | GCATAATATCAATTTACAAA+AGG | - | chr5_1:3343445-3343464 | None:intergenic | 20.0% |
| !!! | TTTAACCTAGTTTTATTTAC+GGG | + | chr5_1:3343521-3343540 | Msa0711450:three_prime_UTR | 20.0% |
| !! | AGATACAATGCAATATAATA+CGG | - | chr5_1:3343622-3343641 | None:intergenic | 20.0% |
| !! | TTAAATAATTGTCAATGTGA+AGG | - | chr5_1:3343687-3343706 | None:intergenic | 20.0% |
| !! | TCACATTGACAATTATTTAA+AGG | + | chr5_1:3343687-3343706 | Msa0711450:three_prime_UTR | 20.0% |
| ! | ATTCTGTTTGATACTGTTAT+TGG | + | chr5_1:3336877-3336896 | Msa0711450:CDS | 25.0% |
| !!! | TTGCTTTTCTTTATGCTTTT+TGG | + | chr5_1:3336993-3337012 | Msa0711450:CDS | 25.0% |
| ! | ATAGTAAAGAAACCTTTATC+AGG | - | chr5_1:3337049-3337068 | None:intergenic | 25.0% |
| ! | AAGAGTGATAAATAACTGTA+TGG | - | chr5_1:3337151-3337170 | None:intergenic | 25.0% |
| !!! | TTTTTTTATCTTTTGCCACT+CGG | + | chr5_1:3337313-3337332 | Msa0711450:intron | 25.0% |
| !!! | TGTAAAGCCATTTTCTTTAT+AGG | + | chr5_1:3337473-3337492 | Msa0711450:intron | 25.0% |
| ! | AATACGTTTGATAAAAGATC+TGG | - | chr5_1:3337569-3337588 | None:intergenic | 25.0% |
| !! | TCTTTTATCAAACGTATTGT+TGG | + | chr5_1:3337571-3337590 | Msa0711450:CDS | 25.0% |
| !!! | ATGGCTTTTTCAAGAATAAA+AGG | - | chr5_1:3337646-3337665 | None:intergenic | 25.0% |
| ! | TTCACCAACTATTATAACTT+TGG | + | chr5_1:3337880-3337899 | Msa0711450:intron | 25.0% |
| ! | TCACCAACTATTATAACTTT+GGG | + | chr5_1:3337881-3337900 | Msa0711450:intron | 25.0% |
| ! | TTTCCCAAAGTTATAATAGT+TGG | - | chr5_1:3337887-3337906 | None:intergenic | 25.0% |
| !! | AACTATTATAACTTTGGGAA+AGG | + | chr5_1:3337886-3337905 | Msa0711450:intron | 25.0% |
| ! | GTAGTTGCAGAAAATTATAA+AGG | + | chr5_1:3338080-3338099 | Msa0711450:intron | 25.0% |
| ! | TATTTCATGCCTTAATTCTT+TGG | + | chr5_1:3338167-3338186 | Msa0711450:intron | 25.0% |
| !! | GTTTCCTTTTTATCAAAATG+GGG | + | chr5_1:3338762-3338781 | Msa0711450:intron | 25.0% |
| ! | ACTTATTTGCATGATTGAAA+GGG | - | chr5_1:3338792-3338811 | None:intergenic | 25.0% |
| ! | TACTTATTTGCATGATTGAA+AGG | - | chr5_1:3338793-3338812 | None:intergenic | 25.0% |
| !!! | TTGGAATTTTTTGCTCAAAT+TGG | + | chr5_1:3338832-3338851 | Msa0711450:intron | 25.0% |
| !!! | TGGAATTTTTTGCTCAAATT+GGG | + | chr5_1:3338833-3338852 | Msa0711450:intron | 25.0% |
| !!! | ACATGATTTGTTTTTACTAC+TGG | + | chr5_1:3338868-3338887 | Msa0711450:intron | 25.0% |
| !!! | ACAGTTTTTTGTGATGATAT+CGG | - | chr5_1:3339116-3339135 | None:intergenic | 25.0% |
| ! | AAATCTGCTTACTATGAAAA+TGG | + | chr5_1:3339290-3339309 | Msa0711450:intron | 25.0% |
| ! | TTGTGTGTATAAAATGATCA+AGG | + | chr5_1:3339398-3339417 | Msa0711450:CDS | 25.0% |
| !!! | ATTTTTAGTTTAGCATCAGT+CGG | - | chr5_1:3339575-3339594 | None:intergenic | 25.0% |
| ! | CTGAATAAAGCTTATGATAT+GGG | + | chr5_1:3339694-3339713 | Msa0711450:intron | 25.0% |
| ! | AATTTACCAAAATATCCATG+TGG | + | chr5_1:3339724-3339743 | Msa0711450:intron | 25.0% |
| !! | CTTTGTCCTAATTTTTGTTA+GGG | - | chr5_1:3339794-3339813 | None:intergenic | 25.0% |
| !! | ACTTTGTCCTAATTTTTGTT+AGG | - | chr5_1:3339795-3339814 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTCACACAAATTA+AGG | - | chr5_1:3339895-3339914 | None:intergenic | 25.0% |
| !!! | TAGCAGCAATAGTATTTTAA+TGG | + | chr5_1:3340009-3340028 | Msa0711450:intron | 25.0% |
| !! | CTGATAATGTGTTTCAATAT+AGG | + | chr5_1:3340231-3340250 | Msa0711450:intron | 25.0% |
| !!! | TTCCTACAGTTTTTTGATAT+AGG | + | chr5_1:3340292-3340311 | Msa0711450:CDS | 25.0% |
| ! | TTCCTATATCAAAAAACTGT+AGG | - | chr5_1:3340297-3340316 | None:intergenic | 25.0% |
| ! | TAAGAATGCATTAGGTTTAA+GGG | - | chr5_1:3340387-3340406 | None:intergenic | 25.0% |
| ! | ATAAGAATGCATTAGGTTTA+AGG | - | chr5_1:3340388-3340407 | None:intergenic | 25.0% |
| ! | CAAAGACATAAAATAGTGAA+TGG | - | chr5_1:3340583-3340602 | None:intergenic | 25.0% |
| ! | TATAAACCCATTTGATATCT+TGG | + | chr5_1:3340768-3340787 | Msa0711450:intron | 25.0% |
| ! | TAAGTTCCAAGATATCAAAT+GGG | - | chr5_1:3340777-3340796 | None:intergenic | 25.0% |
| ! | ATAAGTTCCAAGATATCAAA+TGG | - | chr5_1:3340778-3340797 | None:intergenic | 25.0% |
| ! | TCTTAGGAAATTACATTCAA+TGG | - | chr5_1:3340859-3340878 | None:intergenic | 25.0% |
| ! | TCATGTGAAACTTTCTTATT+TGG | + | chr5_1:3340905-3340924 | Msa0711450:intron | 25.0% |
| ! | TATTCTGTTATGATCATATG+TGG | + | chr5_1:3340943-3340962 | Msa0711450:intron | 25.0% |
| ! | ATACAAATTCTAGTCAACAA+AGG | - | chr5_1:3341171-3341190 | None:intergenic | 25.0% |
| !! | TTTGTTGACTAGAATTTGTA+TGG | + | chr5_1:3341170-3341189 | Msa0711450:intron | 25.0% |
| !!! | TATATTTCCTTGCTATTCAT+CGG | + | chr5_1:3341246-3341265 | Msa0711450:CDS | 25.0% |
| ! | ACCATTTACGAAATACATAT+TGG | + | chr5_1:3341434-3341453 | Msa0711450:intron | 25.0% |
| ! | TCCAATATGTATTTCGTAAA+TGG | - | chr5_1:3341438-3341457 | None:intergenic | 25.0% |
| ! | AATGAATAATATACCTCTTC+TGG | + | chr5_1:3341566-3341585 | Msa0711450:intron | 25.0% |
| ! | AGAGCATATCAATATTGTTT+GGG | - | chr5_1:3341613-3341632 | None:intergenic | 25.0% |
| !! | AAGAGCATATCAATATTGTT+TGG | - | chr5_1:3341614-3341633 | None:intergenic | 25.0% |
| !!! | CTTGTTATTTTTCAACTTGA+CGG | - | chr5_1:3341829-3341848 | None:intergenic | 25.0% |
| ! | CCAAAACAAAAATTGAACTT+AGG | - | chr5_1:3341890-3341909 | None:intergenic | 25.0% |
| !!! | CCTAAGTTCAATTTTTGTTT+TGG | + | chr5_1:3341887-3341906 | Msa0711450:intron | 25.0% |
| ! | AAAATATGTTCCCATTATCT+CGG | - | chr5_1:3341981-3342000 | None:intergenic | 25.0% |
| ! | AATAAATAGTTTCTGTTGAG+TGG | - | chr5_1:3342098-3342117 | None:intergenic | 25.0% |
| !! | TTTATTCCTTTCTTGTTTAC+TGG | + | chr5_1:3342112-3342131 | Msa0711450:intron | 25.0% |
| ! | GGAGACAATATATGAATAAT+AGG | + | chr5_1:3342288-3342307 | Msa0711450:intron | 25.0% |
| ! | ATTCATATTCTCCATGAAAA+TGG | - | chr5_1:3342413-3342432 | None:intergenic | 25.0% |
| ! | AAGGTTTACTTAAACGTTAT+TGG | - | chr5_1:3342479-3342498 | None:intergenic | 25.0% |
| !! | ATTGTTTAGAATTCAACTCA+AGG | + | chr5_1:3342540-3342559 | Msa0711450:intron | 25.0% |
| !!! | TGTGTTGATTGATTCAAATT+TGG | + | chr5_1:3342604-3342623 | Msa0711450:intron | 25.0% |
| !!! | ATTATCATTACAGAGGTATT+GGG | + | chr5_1:3342715-3342734 | Msa0711450:CDS | 25.0% |
| ! | CAATTGGATGTTTATCAATT+TGG | - | chr5_1:3342843-3342862 | None:intergenic | 25.0% |
| !!! | ATATGAGCTAATCCTTTTTT+AGG | + | chr5_1:3342885-3342904 | Msa0711450:intron | 25.0% |
| ! | TAATTCACAATGCCTAAAAA+AGG | - | chr5_1:3342900-3342919 | None:intergenic | 25.0% |
| ! | TTTAAATGCATCAATCTAGA+AGG | - | chr5_1:3343069-3343088 | None:intergenic | 25.0% |
| ! | TAAAATGTTTCGTCAAACAA+TGG | - | chr5_1:3343372-3343391 | None:intergenic | 25.0% |
| !! | CAAAAGGGTTAAAGAATTTT+TGG | - | chr5_1:3343429-3343448 | None:intergenic | 25.0% |
| !! | AACGCTAGATTCTGTTTTAA+TGG | - | chr5_1:3336489-3336508 | None:intergenic | 30.0% |
| ! | AAATGACATACTCTTTAGAG+AGG | - | chr5_1:3336756-3336775 | None:intergenic | 30.0% |
| !! | TCTTTATGCTTTTTGGAGAA+TGG | + | chr5_1:3337000-3337019 | Msa0711450:CDS | 30.0% |
| !! | CTTTATGCTTTTTGGAGAAT+GGG | + | chr5_1:3337001-3337020 | Msa0711450:CDS | 30.0% |
| TTTCTTTACTATGCCTCAAT+TGG | + | chr5_1:3337057-3337076 | Msa0711450:CDS | 30.0% | |
| GAAAATTATTCTCGCTCAAA+TGG | + | chr5_1:3337255-3337274 | Msa0711450:CDS | 30.0% | |
| GAGTGGCAAAAGATAAAAAA+AGG | - | chr5_1:3337314-3337333 | None:intergenic | 30.0% | |
| TAAACAAAAACTGTGTACTG+AGG | + | chr5_1:3337735-3337754 | Msa0711450:intron | 30.0% | |
| ! | GATGATTTGCATTTATGTAG+TGG | + | chr5_1:3337808-3337827 | Msa0711450:intron | 30.0% |
| TAGTGGTTTATGTGTTTAGT+TGG | + | chr5_1:3337825-3337844 | Msa0711450:intron | 30.0% | |
| ! | AATAACGCTTGAGTTTTTCA+AGG | + | chr5_1:3337850-3337869 | Msa0711450:intron | 30.0% |
| GTATTAACTAGAAATTGAGC+AGG | + | chr5_1:3337919-3337938 | Msa0711450:intron | 30.0% | |
| ! | AAAAGGATTGCCTTATTGAT+GGG | + | chr5_1:3337972-3337991 | Msa0711450:intron | 30.0% |
| TATCATTACACCCATCAATA+AGG | - | chr5_1:3337985-3338004 | None:intergenic | 30.0% | |
| AAGGAACTGAACTTGATTAA+TGG | + | chr5_1:3338018-3338037 | Msa0711450:intron | 30.0% | |
| AGGAACTGAACTTGATTAAT+GGG | + | chr5_1:3338019-3338038 | Msa0711450:intron | 30.0% | |
| GGACTCTTATAAATAAGAGA+AGG | - | chr5_1:3338193-3338212 | None:intergenic | 30.0% | |
| CAATCTAGGAAATTTGAATG+TGG | - | chr5_1:3338214-3338233 | None:intergenic | 30.0% | |
| ATGAGTCAAAGAGTTGAAAA+GGG | - | chr5_1:3338237-3338256 | None:intergenic | 30.0% | |
| AATGAGTCAAAGAGTTGAAA+AGG | - | chr5_1:3338238-3338257 | None:intergenic | 30.0% | |
| AACTCTTTGACTCATTACAA+TGG | + | chr5_1:3338242-3338261 | Msa0711450:intron | 30.0% | |
| ACTCTTTGACTCATTACAAT+GGG | + | chr5_1:3338243-3338262 | Msa0711450:intron | 30.0% | |
| GCAAAAAACCAACTAACTAA+AGG | + | chr5_1:3338387-3338406 | Msa0711450:intron | 30.0% | |
| ATTTCTGTAGCTTCTATATG+AGG | + | chr5_1:3338420-3338439 | Msa0711450:intron | 30.0% | |
| ! | ACAAGTTTGAGTTATGGAAT+CGG | + | chr5_1:3338583-3338602 | Msa0711450:intron | 30.0% |
| TATTGGATATTCAGAGAGAT+TGG | + | chr5_1:3338718-3338737 | Msa0711450:intron | 30.0% | |
| TTACCATGTTTCAGTATGAT+TGG | + | chr5_1:3338813-3338832 | Msa0711450:intron | 30.0% | |
| ATTCCAATCATACTGAAACA+TGG | - | chr5_1:3338819-3338838 | None:intergenic | 30.0% | |
| !!! | GGAATTTTTTGCTCAAATTG+GGG | + | chr5_1:3338834-3338853 | Msa0711450:intron | 30.0% |
| !!! | GAATTTTTTGCTCAAATTGG+GGG | + | chr5_1:3338835-3338854 | Msa0711450:intron | 30.0% |
| GTTGAATGTGAAGATATCAA+AGG | + | chr5_1:3339000-3339019 | Msa0711450:intron | 30.0% | |
| GATATCATCACAAAAAACTG+TGG | + | chr5_1:3339115-3339134 | Msa0711450:intron | 30.0% | |
| CAAGTTCAATCACATTAAGA+TGG | - | chr5_1:3339245-3339264 | None:intergenic | 30.0% | |
| CATCTTAATGTGATTGAACT+TGG | + | chr5_1:3339243-3339262 | Msa0711450:intron | 30.0% | |
| TATGCTAGATTAAGGTTTCT+TGG | + | chr5_1:3339459-3339478 | Msa0711450:intron | 30.0% | |
| GGACAAACTAATGTTTGTAA+TGG | + | chr5_1:3339480-3339499 | Msa0711450:intron | 30.0% | |
| CAAACTAATGTTTGTAATGG+TGG | + | chr5_1:3339483-3339502 | Msa0711450:intron | 30.0% | |
| ! | AGCTTTTCGTTAGGTATAAA+TGG | + | chr5_1:3339511-3339530 | Msa0711450:intron | 30.0% |
| !! | CCATATCATAAGCTTTATTC+AGG | - | chr5_1:3339696-3339715 | None:intergenic | 30.0% |
| CCTGAATAAAGCTTATGATA+TGG | + | chr5_1:3339693-3339712 | Msa0711450:intron | 30.0% | |
| ACAGTTCCCTAACAAAAATT+AGG | + | chr5_1:3339785-3339804 | Msa0711450:intron | 30.0% | |
| TGAAAATGAACCAAACTTCT+GGG | - | chr5_1:3339828-3339847 | None:intergenic | 30.0% | |
| ATGAAAATGAACCAAACTTC+TGG | - | chr5_1:3339829-3339848 | None:intergenic | 30.0% | |
| AAGTATATTACCGTGTTGAA+AGG | + | chr5_1:3339943-3339962 | Msa0711450:intron | 30.0% | |
| ATGAGATTCAGACTAAAAGA+TGG | - | chr5_1:3340191-3340210 | None:intergenic | 30.0% | |
| TAATGTGTTTCAATATAGGC+TGG | + | chr5_1:3340235-3340254 | Msa0711450:intron | 30.0% | |
| TATACTTATCATCCTTGTCA+CGG | - | chr5_1:3340272-3340291 | None:intergenic | 30.0% | |
| TTGCATTGTAGAATAGATGA+TGG | + | chr5_1:3340352-3340371 | Msa0711450:intron | 30.0% | |
| !!! | CTTTTTTGTTGCTTTGTATG+AGG | + | chr5_1:3340621-3340640 | Msa0711450:intron | 30.0% |
| CTTGTTTACTGAAGAATGTA+AGG | + | chr5_1:3340663-3340682 | Msa0711450:intron | 30.0% | |
| TAATAGAGATCTCAGTACAA+TGG | - | chr5_1:3340741-3340760 | None:intergenic | 30.0% | |
| GTACATGTGATAAGTAACTA+GGG | - | chr5_1:3340983-3341002 | None:intergenic | 30.0% | |
| AGTACATGTGATAAGTAACT+AGG | - | chr5_1:3340984-3341003 | None:intergenic | 30.0% | |
| ! | AAAGCACCACATATAAACTA+GGG | - | chr5_1:3341084-3341103 | None:intergenic | 30.0% |
| ATTCTAGTCAACAAAGGAAA+AGG | - | chr5_1:3341165-3341184 | None:intergenic | 30.0% | |
| ! | ATTCTTTTGTATATCATCCC+AGG | - | chr5_1:3341487-3341506 | None:intergenic | 30.0% |
| ! | ATCAATATTGTTTGGGACTT+GGG | - | chr5_1:3341606-3341625 | None:intergenic | 30.0% |
| ! | TATCAATATTGTTTGGGACT+TGG | - | chr5_1:3341607-3341626 | None:intergenic | 30.0% |
| CATTATTTCAGTGGTGATAA+GGG | - | chr5_1:3341762-3341781 | None:intergenic | 30.0% | |
| !! | CGTCAAGTTGAAAAATAACA+AGG | + | chr5_1:3341827-3341846 | Msa0711450:intron | 30.0% |
| !!! | TTTTTTGCTGTTTCAAGAGT+TGG | + | chr5_1:3341920-3341939 | Msa0711450:CDS | 30.0% |
| AACACACTTATACCTGTATT+CGG | - | chr5_1:3342041-3342060 | None:intergenic | 30.0% | |
| ! | ATACAGGTATAAGTGTGTTT+TGG | + | chr5_1:3342042-3342061 | Msa0711450:intron | 30.0% |
| ! | TTCAGTATTTCTGATTTAGC+AGG | - | chr5_1:3342238-3342257 | None:intergenic | 30.0% |
| TATGAATAATAGGGTAAGAG+AGG | + | chr5_1:3342298-3342317 | Msa0711450:intron | 30.0% | |
| !!! | CAAGATTTGTTTTGACAGAA+TGG | + | chr5_1:3342343-3342362 | Msa0711450:intron | 30.0% |
| GTGTAGGAATAGTTATAGTT+TGG | + | chr5_1:3342630-3342649 | Msa0711450:intron | 30.0% | |
| ATAGTTTGGATAAACATCCT+AGG | + | chr5_1:3342644-3342663 | Msa0711450:intron | 30.0% | |
| ! | GATTATCATTACAGAGGTAT+TGG | + | chr5_1:3342714-3342733 | Msa0711450:CDS | 30.0% |
| !! | TCCAATTTGACTTTTATCAC+CGG | + | chr5_1:3342746-3342765 | Msa0711450:CDS | 30.0% |
| AAGTTACACTCACAATCAAT+TGG | - | chr5_1:3342859-3342878 | None:intergenic | 30.0% | |
| ! | GTGAACTTTAAAAGTAGGTT+CGG | - | chr5_1:3343298-3343317 | None:intergenic | 30.0% |
| ! | GGTTTGTGAACTTTAAAAGT+AGG | - | chr5_1:3343303-3343322 | None:intergenic | 30.0% |
| !! | TTGACGAAACATTTTAGAGA+AGG | + | chr5_1:3343376-3343395 | Msa0711450:three_prime_UTR | 30.0% |
| TTAGACCCGTAAATAAAACT+AGG | - | chr5_1:3343529-3343548 | None:intergenic | 30.0% | |
| !!! | CACAGCACAATTTTTTTGAA+TGG | - | chr5_1:3343567-3343586 | None:intergenic | 30.0% |
| TGCAATATAATACGGATACA+TGG | - | chr5_1:3343614-3343633 | None:intergenic | 30.0% | |
| ! | ATCTAGCGTTGTTTCGAAAT+CGG | + | chr5_1:3336499-3336518 | Msa0711450:five_prime_UTR | 35.0% |
| TTAGGAAGTTTGTGTTCACT+TGG | + | chr5_1:3336589-3336608 | Msa0711450:CDS | 35.0% | |
| AAGTTTGTGTTCACTTGGTT+GGG | + | chr5_1:3336594-3336613 | Msa0711450:CDS | 35.0% | |
| ! | ACATACTCTTTAGAGAGGAT+GGG | - | chr5_1:3336751-3336770 | None:intergenic | 35.0% |
| TACTTGATGCTTAAAAGCAG+TGG | + | chr5_1:3336926-3336945 | Msa0711450:CDS | 35.0% | |
| AAGAAACCTTTATCAGGTGA+TGG | - | chr5_1:3337043-3337062 | None:intergenic | 35.0% | |
| GAACAGGAACACAAAGTAAA+AGG | - | chr5_1:3337508-3337527 | None:intergenic | 35.0% | |
| TAACTAGAAATTGAGCAGGA+AGG | + | chr5_1:3337923-3337942 | Msa0711450:intron | 35.0% | |
| AACTAGAAATTGAGCAGGAA+GGG | + | chr5_1:3337924-3337943 | Msa0711450:intron | 35.0% | |
| GAAATTCTCGCAGAAACAAA+AGG | + | chr5_1:3337955-3337974 | Msa0711450:intron | 35.0% | |
| ! | CAAAAGGATTGCCTTATTGA+TGG | + | chr5_1:3337971-3337990 | Msa0711450:intron | 35.0% |
| GGAACTGAACTTGATTAATG+GGG | + | chr5_1:3338020-3338039 | Msa0711450:intron | 35.0% | |
| AAGAGAAGGCCAAAGAATTA+AGG | - | chr5_1:3338179-3338198 | None:intergenic | 35.0% | |
| GTTGGAAAATAACTCAGTCT+TGG | - | chr5_1:3338311-3338330 | None:intergenic | 35.0% | |
| TTTGCTCGTCAGTTAGTAAA+CGG | - | chr5_1:3338372-3338391 | None:intergenic | 35.0% | |
| TAGACATGCCTTTAGTTAGT+TGG | - | chr5_1:3338398-3338417 | None:intergenic | 35.0% | |
| !! | TTCAAAGCCTTTTGTTGCTT+TGG | - | chr5_1:3338513-3338532 | None:intergenic | 35.0% |
| !! | CAACAAAAGGCTTTGAAGTT+GGG | + | chr5_1:3338516-3338535 | Msa0711450:intron | 35.0% |
| !! | AACAAAAGGCTTTGAAGTTG+GGG | + | chr5_1:3338517-3338536 | Msa0711450:intron | 35.0% |
| CACATGAAAGTAACTGCTAA+AGG | - | chr5_1:3338552-3338571 | None:intergenic | 35.0% | |
| ATTTGCATGATTGAAAGGGA+CGG | - | chr5_1:3338788-3338807 | None:intergenic | 35.0% | |
| ATGTGAAGATATCAAAGGCA+TGG | + | chr5_1:3339005-3339024 | Msa0711450:intron | 35.0% | |
| GCTTTCAAAGCAATTGTTCT+TGG | + | chr5_1:3339053-3339072 | Msa0711450:CDS | 35.0% | |
| ! | GCGTTGACCTTTAAAAAAAC+TGG | + | chr5_1:3339137-3339156 | Msa0711450:intron | 35.0% |
| CAATCACATTAAGATGGAGT+TGG | - | chr5_1:3339239-3339258 | None:intergenic | 35.0% | |
| GAAAATGGTTTCAACTATGC+AGG | + | chr5_1:3339305-3339324 | Msa0711450:intron | 35.0% | |
| TTCGTTAGGTATAAATGGCT+CGG | + | chr5_1:3339516-3339535 | Msa0711450:intron | 35.0% | |
| ! | CAGATTTATGAGTTGGAACT+TGG | - | chr5_1:3339671-3339690 | None:intergenic | 35.0% |
| TCAGGTTCAGATTTATGAGT+TGG | - | chr5_1:3339678-3339697 | None:intergenic | 35.0% | |
| ! | TTTCAGCCACATGGATATTT+TGG | - | chr5_1:3339733-3339752 | None:intergenic | 35.0% |
| ! | TGTTCATATTTTCAGCCACA+TGG | - | chr5_1:3339742-3339761 | None:intergenic | 35.0% |
| CTTTGCAATGACTGCAAAAA+AGG | - | chr5_1:3340096-3340115 | None:intergenic | 35.0% | |
| !!! | GCAAAGTGTTGTTTTCAAAC+AGG | + | chr5_1:3340110-3340129 | Msa0711450:CDS | 35.0% |
| ATACTTATCATCCTTGTCAC+GGG | - | chr5_1:3340271-3340290 | None:intergenic | 35.0% | |
| !! | AAATGCAGCCTTATTATCTC+AGG | + | chr5_1:3340318-3340337 | Msa0711450:CDS | 35.0% |
| GACACTAACCTGAGATAATA+AGG | - | chr5_1:3340329-3340348 | None:intergenic | 35.0% | |
| CATCTATTCTACAATGCAAC+TGG | - | chr5_1:3340351-3340370 | None:intergenic | 35.0% | |
| TATGAGCTGACGTTATTAAG+TGG | + | chr5_1:3340459-3340478 | Msa0711450:intron | 35.0% | |
| ATGAGCTGACGTTATTAAGT+GGG | + | chr5_1:3340460-3340479 | Msa0711450:intron | 35.0% | |
| GCATGTGTCCTAAATTGATT+AGG | + | chr5_1:3340506-3340525 | Msa0711450:intron | 35.0% | |
| ATAATGAAGTTGACTGCCTA+AGG | - | chr5_1:3341037-3341056 | None:intergenic | 35.0% | |
| !! | GAAAGCACCACATATAAACT+AGG | - | chr5_1:3341085-3341104 | None:intergenic | 35.0% |
| !! | GGCATTTTCGATCTTTTTTG+TGG | + | chr5_1:3341397-3341416 | Msa0711450:intron | 35.0% |
| TATTTCGTAAATGGTTACGC+TGG | - | chr5_1:3341429-3341448 | None:intergenic | 35.0% | |
| GAGTAGACAATTTACATTCC+TGG | + | chr5_1:3341523-3341542 | Msa0711450:intron | 35.0% | |
| ATTATTCCTTTATCCATGCC+AGG | - | chr5_1:3341544-3341563 | None:intergenic | 35.0% | |
| AAATGTCCACTTTGACAGAA+TGG | + | chr5_1:3341712-3341731 | Msa0711450:intron | 35.0% | |
| CCATTATTTCAGTGGTGATA+AGG | - | chr5_1:3341763-3341782 | None:intergenic | 35.0% | |
| CCTTATCACCACTGAAATAA+TGG | + | chr5_1:3341760-3341779 | Msa0711450:intron | 35.0% | |
| !!! | TCTGTTTTTGTCCGAGATAA+TGG | + | chr5_1:3341967-3341986 | Msa0711450:CDS | 35.0% |
| !!! | CTGTTTTTGTCCGAGATAAT+GGG | + | chr5_1:3341968-3341987 | Msa0711450:CDS | 35.0% |
| AATAGTTTCTGTTGAGTGGA+TGG | - | chr5_1:3342094-3342113 | None:intergenic | 35.0% | |
| CTAATGCACAGATTACTAGT+AGG | - | chr5_1:3342172-3342191 | None:intergenic | 35.0% | |
| CGAGAGAAAAGTGAAACATA+AGG | + | chr5_1:3342381-3342400 | Msa0711450:intron | 35.0% | |
| !!! | TAAGGTTGTTGCCATTTTCA+TGG | + | chr5_1:3342399-3342418 | Msa0711450:intron | 35.0% |
| AGATAAATGCTGATCATCCT+AGG | - | chr5_1:3342664-3342683 | None:intergenic | 35.0% | |
| TCTGATCTGAATTCATTGAC+AGG | + | chr5_1:3342692-3342711 | Msa0711450:intron | 35.0% | |
| TGACAGGATTATCATTACAG+AGG | + | chr5_1:3342708-3342727 | Msa0711450:intron | 35.0% | |
| ACCGGTGATAAAAGTCAAAT+TGG | - | chr5_1:3342750-3342769 | None:intergenic | 35.0% | |
| !! | AATTTGACTTTTATCACCGG+TGG | + | chr5_1:3342749-3342768 | Msa0711450:CDS | 35.0% |
| CAAATATTGCATCAAACCAC+CGG | - | chr5_1:3342768-3342787 | None:intergenic | 35.0% | |
| GTGGTTTGATGCAATATTTG+TGG | + | chr5_1:3342768-3342787 | Msa0711450:CDS | 35.0% | |
| CAGATAGTAAAAGTAGGGAA+AGG | - | chr5_1:3342804-3342823 | None:intergenic | 35.0% | |
| ATGCGCAGATAGTAAAAGTA+GGG | - | chr5_1:3342809-3342828 | None:intergenic | 35.0% | |
| AATGCGCAGATAGTAAAAGT+AGG | - | chr5_1:3342810-3342829 | None:intergenic | 35.0% | |
| ATAGTTTCTACTGCAACGAA+AGG | + | chr5_1:3343010-3343029 | Msa0711450:CDS | 35.0% | |
| !! | ATTTCTAGTCAGCAATTCAC+TGG | - | chr5_1:3343134-3343153 | None:intergenic | 35.0% |
| ! | TGCTGACTAGAAATTCATAC+CGG | + | chr5_1:3343140-3343159 | Msa0711450:CDS | 35.0% |
| ! | TTCTCATTGATGATCTCTTC+CGG | - | chr5_1:3343162-3343181 | None:intergenic | 35.0% |
| CATGGATATTCCAATAGACT+TGG | - | chr5_1:3343227-3343246 | None:intergenic | 35.0% | |
| CTATTGGAATATCCATGTCT+AGG | + | chr5_1:3343230-3343249 | Msa0711450:CDS | 35.0% | |
| ! | ATTTTGAACAGTCCTAGACA+TGG | - | chr5_1:3343245-3343264 | None:intergenic | 35.0% |
| ATTTGGTCCTCGTTGTTAAA+GGG | - | chr5_1:3343324-3343343 | None:intergenic | 35.0% | |
| AATTTGGTCCTCGTTGTTAA+AGG | - | chr5_1:3343325-3343344 | None:intergenic | 35.0% | |
| ATTGTATCTTCAGACTTCAC+AGG | + | chr5_1:3343633-3343652 | Msa0711450:three_prime_UTR | 35.0% | |
| !! | ATCGATCTTGGTGTTAGGAT+GGG | + | chr5_1:3336532-3336551 | Msa0711450:exon | 40.0% |
| TTGGAAGGTTCAGTTGTGTT+AGG | + | chr5_1:3336571-3336590 | Msa0711450:CDS | 40.0% | |
| GAAGTTTGTGTTCACTTGGT+TGG | + | chr5_1:3336593-3336612 | Msa0711450:CDS | 40.0% | |
| ! | GACATACTCTTTAGAGAGGA+TGG | - | chr5_1:3336752-3336771 | None:intergenic | 40.0% |
| CCAATTCTACTGACCAATTG+AGG | - | chr5_1:3337073-3337092 | None:intergenic | 40.0% | |
| CCTCAATTGGTCAGTAGAAT+TGG | + | chr5_1:3337070-3337089 | Msa0711450:CDS | 40.0% | |
| !! | GTCAGTAGAATTGGTGTCAT+TGG | + | chr5_1:3337079-3337098 | Msa0711450:CDS | 40.0% |
| !! | TGTCATTGGTGTTACTGTCA+TGG | + | chr5_1:3337093-3337112 | Msa0711450:CDS | 40.0% |
| !! | ATGGCTGTTCTATCTGGTTT+TGG | + | chr5_1:3337112-3337131 | Msa0711450:CDS | 40.0% |
| ACTCTTCATCAGAGAGATTG+AGG | + | chr5_1:3337165-3337184 | Msa0711450:CDS | 40.0% | |
| CTGCATAAGTTGTCTTTCCA+AGG | - | chr5_1:3337206-3337225 | None:intergenic | 40.0% | |
| CTTATGCAGTCAATTGAGAC+TGG | + | chr5_1:3337217-3337236 | Msa0711450:CDS | 40.0% | |
| TATTCTCGCTCAAATGGAGA+TGG | + | chr5_1:3337261-3337280 | Msa0711450:CDS | 40.0% | |
| AGTTCAGATGAAGCTAGAAC+AGG | - | chr5_1:3337524-3337543 | None:intergenic | 40.0% | |
| !! | TCTGAACTTGTTTTTCGCAG+AGG | + | chr5_1:3337536-3337555 | Msa0711450:intron | 40.0% |
| AGAGTTGAAAAGGGCAATCT+AGG | - | chr5_1:3338228-3338247 | None:intergenic | 40.0% | |
| TGACTCATTACAATGGGTCT+CGG | + | chr5_1:3338249-3338268 | Msa0711450:intron | 40.0% | |
| AGGCAGAATAAGTAGACAGT+TGG | - | chr5_1:3338329-3338348 | None:intergenic | 40.0% | |
| GTTAGGAGGTGACTATAGAT+AGG | - | chr5_1:3338349-3338368 | None:intergenic | 40.0% | |
| TTGCTCGTCAGTTAGTAAAC+GGG | - | chr5_1:3338371-3338390 | None:intergenic | 40.0% | |
| TGTAGCTTCTATATGAGGCT+TGG | + | chr5_1:3338425-3338444 | Msa0711450:intron | 40.0% | |
| !!! | TGAGGCTTGGTTAGTTTTCA+TGG | + | chr5_1:3338438-3338457 | Msa0711450:intron | 40.0% |
| !!! | GAGGCTTGGTTAGTTTTCAT+GGG | + | chr5_1:3338439-3338458 | Msa0711450:intron | 40.0% |
| ATGAGCTCCAAAGCAACAAA+AGG | + | chr5_1:3338503-3338522 | Msa0711450:intron | 40.0% | |
| !! | GCAACAAAAGGCTTTGAAGT+TGG | + | chr5_1:3338515-3338534 | Msa0711450:intron | 40.0% |
| ! | GAGGTCACAAGTTTGAGTTA+TGG | + | chr5_1:3338577-3338596 | Msa0711450:intron | 40.0% |
| CCTTGTCTTGCATTTACAAG+AGG | - | chr5_1:3338609-3338628 | None:intergenic | 40.0% | |
| CCTCTTGTAAATGCAAGACA+AGG | + | chr5_1:3338606-3338625 | Msa0711450:intron | 40.0% | |
| TGTAGGCCATGAGTTATTGT+GGG | - | chr5_1:3338635-3338654 | None:intergenic | 40.0% | |
| AAACTTGTGCTATCCAGTCA+TGG | - | chr5_1:3338687-3338706 | None:intergenic | 40.0% | |
| !! | ACGGCCCCATTTTGATAAAA+AGG | - | chr5_1:3338769-3338788 | None:intergenic | 40.0% |
| GCATATTCTCGAACTTGGAA+AGG | + | chr5_1:3339336-3339355 | Msa0711450:CDS | 40.0% | |
| GGACATATGCAGAATCTACT+AGG | + | chr5_1:3339357-3339376 | Msa0711450:CDS | 40.0% | |
| TCAGTCGGCAAATAGATTGT+TGG | - | chr5_1:3339560-3339579 | None:intergenic | 40.0% | |
| CCTATTATGAGTGTCACACT+AGG | - | chr5_1:3339916-3339935 | None:intergenic | 40.0% | |
| CCTAGTGTGACACTCATAAT+AGG | + | chr5_1:3339913-3339932 | Msa0711450:intron | 40.0% | |
| GTGTGACACTCATAATAGGA+CGG | + | chr5_1:3339917-3339936 | Msa0711450:intron | 40.0% | |
| CTCAACTGAACCTTTCAACA+CGG | - | chr5_1:3339956-3339975 | None:intergenic | 40.0% | |
| ACTATGTTGTGACACCTGTA+CGG | + | chr5_1:3339980-3339999 | Msa0711450:intron | 40.0% | |
| !! | TACAATGGCTCTGATTAGTG+GGG | - | chr5_1:3340726-3340745 | None:intergenic | 40.0% |
| !! | GTACAATGGCTCTGATTAGT+GGG | - | chr5_1:3340727-3340746 | None:intergenic | 40.0% |
| !! | AGTACAATGGCTCTGATTAG+TGG | - | chr5_1:3340728-3340747 | None:intergenic | 40.0% |
| AGCTCTCCCTAGTTTATATG+TGG | + | chr5_1:3341075-3341094 | Msa0711450:intron | 40.0% | |
| AGGAGAGTAACAGAAGACTA+TGG | - | chr5_1:3341125-3341144 | None:intergenic | 40.0% | |
| AGGTGTATGAGAGAAGAACT+AGG | - | chr5_1:3341145-3341164 | None:intergenic | 40.0% | |
| CAACATTCCGATGAATAGCA+AGG | - | chr5_1:3341256-3341275 | None:intergenic | 40.0% | |
| !! | CTTGCTATTCATCGGAATGT+TGG | + | chr5_1:3341254-3341273 | Msa0711450:CDS | 40.0% |
| GCTGAATTTGCATACAACCT+GGG | + | chr5_1:3341467-3341486 | Msa0711450:intron | 40.0% | |
| GACAATTTACATTCCTGGCA+TGG | + | chr5_1:3341528-3341547 | Msa0711450:intron | 40.0% | |
| TACATTCCTGGCATGGATAA+AGG | + | chr5_1:3341535-3341554 | Msa0711450:intron | 40.0% | |
| AGATTGTCTAGTACCAGAAG+AGG | - | chr5_1:3341582-3341601 | None:intergenic | 40.0% | |
| TTCGATGGCCATTATTTCAG+TGG | - | chr5_1:3341771-3341790 | None:intergenic | 40.0% | |
| CAAAAACAGAACAACGTTGC+TGG | - | chr5_1:3341957-3341976 | None:intergenic | 40.0% | |
| AAAGCTTAGCAACCGAATAC+AGG | + | chr5_1:3342026-3342045 | Msa0711450:CDS | 40.0% | |
| CCAAAGCCAGTAAACAAGAA+AGG | - | chr5_1:3342121-3342140 | None:intergenic | 40.0% | |
| !! | CCTTTCTTGTTTACTGGCTT+TGG | + | chr5_1:3342118-3342137 | Msa0711450:intron | 40.0% |
| GCGCAATTAGTTCACAAACA+TGG | + | chr5_1:3342146-3342165 | Msa0711450:intron | 40.0% | |
| TTCTGATTTAGCAGGATTGC+TGG | - | chr5_1:3342230-3342249 | None:intergenic | 40.0% | |
| GTGTGCTTGATATTTACCTG+TGG | + | chr5_1:3342263-3342282 | Msa0711450:intron | 40.0% | |
| AAACAACCAGACTCTTGCTT+CGG | - | chr5_1:3342576-3342595 | None:intergenic | 40.0% | |
| GATTCAAATTTGGCACGTGT+AGG | + | chr5_1:3342614-3342633 | Msa0711450:intron | 40.0% | |
| !! | ATCATTACAGAGGTATTGGG+CGG | + | chr5_1:3342718-3342737 | Msa0711450:CDS | 40.0% |
| TTCTACTGCAACGAAAGGTA+TGG | + | chr5_1:3343015-3343034 | Msa0711450:intron | 40.0% | |
| GGAAGAGATCATCAATGAGA+AGG | + | chr5_1:3343161-3343180 | Msa0711450:CDS | 40.0% | |
| ! | CGGTTGATTTCAGTTTGGTT+CGG | - | chr5_1:3343278-3343297 | None:intergenic | 40.0% |
| ! | AGGTTCGGTTGATTTCAGTT+TGG | - | chr5_1:3343283-3343302 | None:intergenic | 40.0% |
| TCACAAACCCTTTAACAACG+AGG | + | chr5_1:3343314-3343333 | Msa0711450:three_prime_UTR | 40.0% | |
| ATATTTCCCGGCAGCAAATT+TGG | - | chr5_1:3343341-3343360 | None:intergenic | 40.0% | |
| ATGGTCCTGCAAATATTTCC+CGG | - | chr5_1:3343353-3343372 | None:intergenic | 40.0% | |
| GGAATCAGAGTGATCGATCT+TGG | + | chr5_1:3336520-3336539 | Msa0711450:five_prime_UTR | 45.0% | |
| !! | GAGTGATCGATCTTGGTGTT+AGG | + | chr5_1:3336527-3336546 | Msa0711450:five_prime_UTR | 45.0% |
| !! | GATCGATCTTGGTGTTAGGA+TGG | + | chr5_1:3336531-3336550 | Msa0711450:exon | 45.0% |
| !! | ATCTTGGTGTTAGGATGGGT+TGG | + | chr5_1:3336536-3336555 | Msa0711450:exon | 45.0% |
| !! | TCTTGGTGTTAGGATGGGTT+GGG | + | chr5_1:3336537-3336556 | Msa0711450:exon | 45.0% |
| ATAGGGCAAGAGTTGTGAAC+TGG | + | chr5_1:3336843-3336862 | Msa0711450:intron | 45.0% | |
| AGAACTGAAAGAGCTGCACT+TGG | + | chr5_1:3336953-3336972 | Msa0711450:CDS | 45.0% | |
| ! | CCTTTATCAGGTGATGGCAT+TGG | - | chr5_1:3337037-3337056 | None:intergenic | 45.0% |
| CCAATGCCATCACCTGATAA+AGG | + | chr5_1:3337034-3337053 | Msa0711450:CDS | 45.0% | |
| ACTGTCATGGCTGTTCTATC+TGG | + | chr5_1:3337106-3337125 | Msa0711450:CDS | 45.0% | |
| GATTGAGGAAACCGAGATCA+AGG | + | chr5_1:3337180-3337199 | Msa0711450:CDS | 45.0% | |
| TCTTTCCAAGGCCTTGATCT+CGG | - | chr5_1:3337194-3337213 | None:intergenic | 45.0% | |
| ATGGAGATGGAGAACAAGCA+AGG | + | chr5_1:3337274-3337293 | Msa0711450:CDS | 45.0% | |
| GAACAAGCAAGGATCTGAAG+AGG | + | chr5_1:3337285-3337304 | Msa0711450:CDS | 45.0% | |
| ! | TTTGCCACTCGGCATGTTTT+TGG | + | chr5_1:3337324-3337343 | Msa0711450:intron | 45.0% |
| GAAACTAACCTTGCTCCTTC+TGG | - | chr5_1:3337624-3337643 | None:intergenic | 45.0% | |
| ! | TCTAAAGCAGGCGCTTCAAA+TGG | - | chr5_1:3337665-3337684 | None:intergenic | 45.0% |
| ATTGAGCAGGAAGGGAAGAA+AGG | + | chr5_1:3337932-3337951 | Msa0711450:intron | 45.0% | |
| TTGAGCAGGAAGGGAAGAAA+GGG | + | chr5_1:3337933-3337952 | Msa0711450:intron | 45.0% | |
| TTACAATGGGTCTCGGTCAA+TGG | + | chr5_1:3338256-3338275 | Msa0711450:intron | 45.0% | |
| !! | CAGTTAGTAAACGGGTTAGG+AGG | - | chr5_1:3338363-3338382 | None:intergenic | 45.0% |
| ! | CGTCAGTTAGTAAACGGGTT+AGG | - | chr5_1:3338366-3338385 | None:intergenic | 45.0% |
| ! | TTTGGAGCTCATACTGTAGC+GGG | - | chr5_1:3338495-3338514 | None:intergenic | 45.0% |
| !! | CTTTGGAGCTCATACTGTAG+CGG | - | chr5_1:3338496-3338515 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCATGTGCCT+AGG | + | chr5_1:3338555-3338574 | Msa0711450:intron | 45.0% |
| ! | GTTACTTTCATGTGCCTAGG+AGG | + | chr5_1:3338558-3338577 | Msa0711450:intron | 45.0% |
| ACTCAAACTTGTGACCTCCT+AGG | - | chr5_1:3338575-3338594 | None:intergenic | 45.0% | |
| AGGTTGCCCACAATAACTCA+TGG | + | chr5_1:3338626-3338645 | Msa0711450:intron | 45.0% | |
| CTGTAGGCCATGAGTTATTG+TGG | - | chr5_1:3338636-3338655 | None:intergenic | 45.0% | |
| TTGTGCTATCCAGTCATGGT+GGG | - | chr5_1:3338683-3338702 | None:intergenic | 45.0% | |
| ! | TATCAAAGGCATGGAAGCAG+AGG | + | chr5_1:3339014-3339033 | Msa0711450:CDS | 45.0% |
| CTATGAGCTTCGACAAGCAA+AGG | + | chr5_1:3339080-3339099 | Msa0711450:CDS | 45.0% | |
| CTGCTGCATATTCTCGAACT+TGG | + | chr5_1:3339331-3339350 | Msa0711450:CDS | 45.0% | |
| !!! | GTGGACTAGAGCTTTTCGTT+AGG | + | chr5_1:3339502-3339521 | Msa0711450:intron | 45.0% |
| ! | AATGGCTCGGAAGCAAAGTA+TGG | + | chr5_1:3339529-3339548 | Msa0711450:intron | 45.0% |
| ACAGATTGCACCCAGAAGTT+TGG | + | chr5_1:3339815-3339834 | Msa0711450:intron | 45.0% | |
| TGACACTCATAATAGGACGG+AGG | + | chr5_1:3339920-3339939 | Msa0711450:intron | 45.0% | |
| CGTGTTGAAAGGTTCAGTTG+AGG | + | chr5_1:3339954-3339973 | Msa0711450:intron | 45.0% | |
| TGCTGCTAATATCACCGTAC+AGG | - | chr5_1:3339997-3340016 | None:intergenic | 45.0% | |
| TTGGTTGTGATATCAGTGCG+TGG | + | chr5_1:3341273-3341292 | Msa0711450:CDS | 45.0% | |
| GGCTGAATTTGCATACAACC+TGG | + | chr5_1:3341466-3341485 | Msa0711450:intron | 45.0% | |
| GTTCTGCCATTCTGTCAAAG+TGG | - | chr5_1:3341721-3341740 | None:intergenic | 45.0% | |
| AGGGTAGCATCTCACAATAG+AGG | - | chr5_1:3341743-3341762 | None:intergenic | 45.0% | |
| !! | GCTGGAAAGTTGATGTTCGA+TGG | - | chr5_1:3341786-3341805 | None:intergenic | 45.0% |
| ! | GCTGTTTCAAGAGTTGGAAG+TGG | + | chr5_1:3341926-3341945 | Msa0711450:CDS | 45.0% |
| GCTTGATATTTACCTGTGGC+CGG | + | chr5_1:3342267-3342286 | Msa0711450:intron | 45.0% | |
| ! | TGCAACGAAAGGTATGGTTC+AGG | + | chr5_1:3343021-3343040 | Msa0711450:intron | 45.0% |
| ! | GCAACGAAAGGTATGGTTCA+GGG | + | chr5_1:3343022-3343041 | Msa0711450:intron | 45.0% |
| ! | GTTCAGGGCACTAAACATGA+TGG | + | chr5_1:3343037-3343056 | Msa0711450:intron | 45.0% |
| AGTCAGCAATTCACTGGCAT+AGG | - | chr5_1:3343128-3343147 | None:intergenic | 45.0% | |
| GCACATACTGCCAAGTCTAT+TGG | + | chr5_1:3343214-3343233 | Msa0711450:CDS | 45.0% | |
| GGGTCTAAGTTGTGTTGTGT+TGG | + | chr5_1:3343541-3343560 | Msa0711450:three_prime_UTR | 45.0% | |
| !!! | TACAAATTTTAAATTTTTTT+TGG | + | chr5_1:3338978-3338997 | Msa0711450:intron | 5.0% |
| !! | CTTGGTGTTAGGATGGGTTG+GGG | + | chr5_1:3336538-3336557 | Msa0711450:exon | 50.0% |
| TGGGGAAGAGGAATCTTGGA+AGG | + | chr5_1:3336556-3336575 | Msa0711450:CDS | 50.0% | |
| TTGTGTTCACTTGGTTGGGC+AGG | + | chr5_1:3336598-3336617 | Msa0711450:CDS | 50.0% | |
| GAGTCCAAAAACATGCCGAG+TGG | - | chr5_1:3337331-3337350 | None:intergenic | 50.0% | |
| AGTTGTTCGATCCGTGCAAG+AGG | + | chr5_1:3337597-3337616 | Msa0711450:CDS | 50.0% | |
| !! | CTCATACTGTAGCGGGTCTA+GGG | - | chr5_1:3338488-3338507 | None:intergenic | 50.0% |
| !! | AAGGCTTTGAAGTTGGGGTG+TGG | + | chr5_1:3338522-3338541 | Msa0711450:intron | 50.0% |
| !! | AGGCTTTGAAGTTGGGGTGT+GGG | + | chr5_1:3338523-3338542 | Msa0711450:intron | 50.0% |
| GAAGGGTCGGACATATCTGT+AGG | - | chr5_1:3338652-3338671 | None:intergenic | 50.0% | |
| TGTGCTATCCAGTCATGGTG+GGG | - | chr5_1:3338682-3338701 | None:intergenic | 50.0% | |
| CTTGTGCTATCCAGTCATGG+TGG | - | chr5_1:3338684-3338703 | None:intergenic | 50.0% | |
| GTTCAGTTGATCCCGTGACA+AGG | + | chr5_1:3340257-3340276 | Msa0711450:CDS | 50.0% | |
| !! | AATGGCTCTGATTAGTGGGG+AGG | - | chr5_1:3340723-3340742 | None:intergenic | 50.0% |
| TGGATGGCACTTCGAGAGAT+TGG | - | chr5_1:3342078-3342097 | None:intergenic | 50.0% | |
| CATATATTGTCTCCGGCCAC+AGG | - | chr5_1:3342282-3342301 | None:intergenic | 50.0% | |
| AGCAAACCGAAGCAAGAGTC+TGG | + | chr5_1:3342567-3342586 | Msa0711450:intron | 50.0% | |
| !! | ACGAGGACCAAATTTGCTGC+CGG | + | chr5_1:3343331-3343350 | Msa0711450:three_prime_UTR | 50.0% |
| TGCTGCCGGGAAATATTTGC+AGG | + | chr5_1:3343345-3343364 | Msa0711450:three_prime_UTR | 50.0% | |
| !! | GTTAGGATGGGTTGGGGAAG+AGG | + | chr5_1:3336544-3336563 | Msa0711450:exon | 55.0% |
| GGGTTGGGGAAGAGGAATCT+TGG | + | chr5_1:3336552-3336571 | Msa0711450:CDS | 55.0% | |
| CACTTGGTTGGGCAGGTGTT+TGG | + | chr5_1:3336605-3336624 | Msa0711450:CDS | 55.0% | |
| GGAAACCGAGATCAAGGCCT+TGG | + | chr5_1:3337186-3337205 | Msa0711450:CDS | 55.0% | |
| ATCCGTGCAAGAGGACCAGA+AGG | + | chr5_1:3337606-3337625 | Msa0711450:CDS | 55.0% | |
| CTCCTTCTGGTCCTCTTGCA+CGG | - | chr5_1:3337611-3337630 | None:intergenic | 55.0% | |
| CAAGAGGACCAGAAGGAGCA+AGG | + | chr5_1:3337613-3337632 | Msa0711450:CDS | 55.0% | |
| !! | ACTGTAGCGGGTCTAGGGAA+GGG | - | chr5_1:3338483-3338502 | None:intergenic | 55.0% |
| !! | TACTGTAGCGGGTCTAGGGA+AGG | - | chr5_1:3338484-3338503 | None:intergenic | 55.0% |
| !! | GCTCATACTGTAGCGGGTCT+AGG | - | chr5_1:3338489-3338508 | None:intergenic | 55.0% |
| !! | GGCTTTGAAGTTGGGGTGTG+GGG | + | chr5_1:3338524-3338543 | Msa0711450:intron | 55.0% |
| ! | CATGGTGGGGGTCTAGAGAA+GGG | - | chr5_1:3338669-3338688 | None:intergenic | 55.0% |
| ! | TCATGGTGGGGGTCTAGAGA+AGG | - | chr5_1:3338670-3338689 | None:intergenic | 55.0% |
| GTGCTATCCAGTCATGGTGG+GGG | - | chr5_1:3338681-3338700 | None:intergenic | 55.0% | |
| ! | AGGCATGGAAGCAGAGGTAC+TGG | + | chr5_1:3339020-3339039 | Msa0711450:CDS | 55.0% |
| !! | CGAGGACCAAATTTGCTGCC+GGG | + | chr5_1:3343332-3343351 | Msa0711450:three_prime_UTR | 55.0% |
| GTGGGGGTCTAGAGAAGGGT+CGG | - | chr5_1:3338665-3338684 | None:intergenic | 60.0% | |
| CTCTAGACCCCCACCATGAC+TGG | + | chr5_1:3338671-3338690 | Msa0711450:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 3336380 | 3343726 | 3336380 | ID=Msa0711450;Name=Msa0711450 |
| chr5_1 | mRNA | 3336380 | 3343726 | 3336380 | ID=Msa0711450-mRNA-1;Parent=Msa0711450;Name=Msa0711450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=170|0.90|0.91|1|0.81|0.83|12|453|531 |
| chr5_1 | exon | 3336380 | 3336764 | 3336380 | ID=Msa0711450-mRNA-1:exon:1223;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3336847 | 3337306 | 3336847 | ID=Msa0711450-mRNA-1:exon:1224;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3337556 | 3337634 | 3337556 | ID=Msa0711450-mRNA-1:exon:1225;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3339013 | 3339101 | 3339013 | ID=Msa0711450-mRNA-1:exon:1226;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3339327 | 3339419 | 3339327 | ID=Msa0711450-mRNA-1:exon:1227;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3340105 | 3340131 | 3340105 | ID=Msa0711450-mRNA-1:exon:1228;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3340253 | 3340339 | 3340253 | ID=Msa0711450-mRNA-1:exon:1229;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3341246 | 3341317 | 3341246 | ID=Msa0711450-mRNA-1:exon:1230;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3341917 | 3342047 | 3341917 | ID=Msa0711450-mRNA-1:exon:1231;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3342714 | 3342869 | 3342714 | ID=Msa0711450-mRNA-1:exon:1232;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3342984 | 3343031 | 3342984 | ID=Msa0711450-mRNA-1:exon:1233;Parent=Msa0711450-mRNA-1 |
| chr5_1 | exon | 3343135 | 3343726 | 3343135 | ID=Msa0711450-mRNA-1:exon:1234;Parent=Msa0711450-mRNA-1 |
| chr5_1 | five_prime_UTR | 3336380 | 3336549 | 3336380 | ID=Msa0711450-mRNA-1:five_prime_utr;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3336550 | 3336764 | 3336550 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3336847 | 3337306 | 3336847 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3337556 | 3337634 | 3337556 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3339013 | 3339101 | 3339013 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3339327 | 3339419 | 3339327 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3340105 | 3340131 | 3340105 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3340253 | 3340339 | 3340253 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3341246 | 3341317 | 3341246 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3341917 | 3342047 | 3341917 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3342714 | 3342869 | 3342714 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3342984 | 3343031 | 3342984 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | CDS | 3343135 | 3343273 | 3343135 | ID=Msa0711450-mRNA-1:cds;Parent=Msa0711450-mRNA-1 |
| chr5_1 | three_prime_UTR | 3343274 | 3343726 | 3343274 | ID=Msa0711450-mRNA-1:three_prime_utr;Parent=Msa0711450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
