Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840330 | XP_003612583.1 | 99.289 | 703 | 5 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840330 | sp|F4KD71|DUR3_ARATH | 78.541 | 699 | 144 | 2 | 5 | 698 | 2 | 699 | 0.0 | 1117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840330 | G7K6S1 | 99.289 | 703 | 5 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1406 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0760440 | Msa0840330 | 0.920586 | 1.061059e-87 | -8.615850e-47 |
| Msa0801780 | Msa0840330 | 0.850814 | 1.331544e-60 | -8.615850e-47 |
| Msa0840330 | Msa0915610 | 0.801811 | 7.549907e-49 | -8.615850e-47 |
| Msa0840330 | Msa1009110 | 0.824307 | 8.664150e-54 | -8.615850e-47 |
| Msa0840330 | Msa1201200 | 0.815723 | 7.988322e-52 | -8.615850e-47 |
| Msa0840330 | Msa1304890 | -0.809091 | 2.246097e-50 | -8.615850e-47 |
| Msa0840330 | Msa1446900 | 0.818608 | 1.793672e-52 | -8.615850e-47 |
| Msa0840330 | Msa1458510 | 0.801075 | 1.068208e-48 | -8.615850e-47 |
| Msa0200850 | Msa0840330 | 0.803636 | 3.171730e-49 | -8.615850e-47 |
| Msa0387660 | Msa0840330 | 0.810680 | 1.021844e-50 | -8.615850e-47 |
| Msa0387690 | Msa0840330 | 0.816603 | 5.077712e-52 | -8.615850e-47 |
| Msa0281930 | Msa0840330 | 0.816812 | 4.558721e-52 | -8.615850e-47 |
| Msa0321080 | Msa0840330 | 0.809994 | 1.437119e-50 | -8.615850e-47 |
| Msa0526070 | Msa0840330 | -0.803917 | 2.773169e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840330 | MtrunA17_Chr5g0409141 | 99.289 | 703 | 5 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1406 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840330 | AT5G45380.1 | 78.541 | 699 | 144 | 2 | 5 | 698 | 2 | 699 | 0.0 | 1117 |
Find 181 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATGTTGCTTGGGAATA+TGG | 0.159857 | 5_4:+16032685 | Msa0840330:CDS |
| GGTAATGTTATTTGGAATTA+TGG | 0.160209 | 5_4:+16032869 | Msa0840330:intron |
| GCAATTCTTGGAACGGTATT+TGG | 0.166478 | 5_4:+16035022 | Msa0840330:CDS |
| TATGATCAGGTAATGTTATT+TGG | 0.182614 | 5_4:+16032861 | Msa0840330:intron |
| TATTCTATCATTCTTGGTTT+TGG | 0.208101 | 5_4:+16031990 | Msa0840330:CDS |
| ATGGGGTTAGTGGACCTTTC+TGG | 0.215765 | 5_4:+16032704 | Msa0840330:CDS |
| CTATTGCTTTCATGCTTCTA+TGG | 0.236645 | 5_4:+16034978 | Msa0840330:CDS |
| ACACTTCTTTCTTTCTTTCA+TGG | 0.252891 | 5_4:+16031845 | Msa0840330:exon |
| TACACTAGCTGGTGGATTAA+AGG | 0.256191 | 5_4:+16033341 | Msa0840330:CDS |
| TGTGAAATATTTAGGGCTAT+TGG | 0.266066 | 5_4:+16034218 | Msa0840330:intron |
| CCTAGGGTTTGGATGTTTCA+TGG | 0.275442 | 5_4:+16034865 | Msa0840330:CDS |
| AGCAAATACTATCATCAAAA+TGG | 0.278871 | 5_4:+16031903 | Msa0840330:CDS |
| GTATCCCAGCTCTCTATTAT+TGG | 0.295258 | 5_4:-16036209 | None:intergenic |
| GTTGGATATTCTATCATTCT+TGG | 0.299292 | 5_4:+16031984 | Msa0840330:CDS |
| TTTGGCTACATCACTTGGTT+TGG | 0.301535 | 5_4:+16034324 | Msa0840330:CDS |
| GTAACGGCTATGTTACTTCT+TGG | 0.302150 | 5_4:+16033237 | Msa0840330:CDS |
| AAGCAACATTAGAGCTTTGC+AGG | 0.303924 | 5_4:-16032675 | None:intergenic |
| AACCTTGTTTCTATACTAAC+TGG | 0.308038 | 5_4:+16035145 | Msa0840330:CDS |
| GTGAAATATTTAGGGCTATT+GGG | 0.312228 | 5_4:+16034219 | Msa0840330:intron |
| TTGGCTACATCACTTGGTTT+GGG | 0.313726 | 5_4:+16034325 | Msa0840330:CDS |
| GCTGTTGTAAATGCATTAAC+TGG | 0.314604 | 5_4:+16033267 | Msa0840330:CDS |
| ACGGTATTTGGTTGTGTTCT+TGG | 0.316322 | 5_4:+16035034 | Msa0840330:CDS |
| CTTCCTATGTAAGATTTATA+AGG | 0.317761 | 5_4:+16036392 | Msa0840330:exon |
| TTCTGGGCTGTGATTGCTAT+AGG | 0.320090 | 5_4:+16036149 | Msa0840330:CDS |
| AATGCAATTGGAGCAATTCT+TGG | 0.320555 | 5_4:+16035010 | Msa0840330:CDS |
| CCTGCCTCACTTTCATTTAG+TGG | 0.323612 | 5_4:-16034367 | None:intergenic |
| TAAAGTTTGGATTGTGAAAT+GGG | 0.326899 | 5_4:+16035306 | Msa0840330:CDS |
| AGTTAACAAGGGCTAAAGTT+TGG | 0.327333 | 5_4:+16035293 | Msa0840330:CDS |
| TGTTTGTTCTGCAGTGGACT+TGG | 0.336559 | 5_4:+16032641 | Msa0840330:intron |
| CCTTTGTGATTTCCACTAAC+AGG | 0.343389 | 5_4:-16033852 | None:intergenic |
| ATTAACATTGTTGGCAACTT+TGG | 0.345118 | 5_4:+16033921 | Msa0840330:CDS |
| CTAATGTTGCTTGGGAATAT+GGG | 0.350625 | 5_4:+16032686 | Msa0840330:CDS |
| AGTGATGTAGCCAAAGAAAA+TGG | 0.361287 | 5_4:-16034316 | None:intergenic |
| ACCATCCAAACTGTTATTCT+AGG | 0.368778 | 5_4:+16036230 | Msa0840330:CDS |
| GGGCTACTTGTTGGGAGGCT+TGG | 0.373460 | 5_4:+16034279 | Msa0840330:CDS |
| CTAAAGTTTGGATTGTGAAA+TGG | 0.386988 | 5_4:+16035305 | Msa0840330:CDS |
| ACTTGTTGGGAGGCTTGGTC+TGG | 0.388862 | 5_4:+16034284 | Msa0840330:CDS |
| CATAGAAGCATGAAAGCAAT+AGG | 0.390735 | 5_4:-16034977 | None:intergenic |
| AGCTACTGCTGTAGCCTTGA+TGG | 0.390879 | 5_4:+16034408 | Msa0840330:CDS |
| TTTGGGATTATTAACATTGT+TGG | 0.391861 | 5_4:+16033912 | Msa0840330:CDS |
| GATTGCCCATGGTGTGATAT+AGG | 0.394405 | 5_4:-16033822 | None:intergenic |
| AGAGGTGTTGTCCTAGGGTT+TGG | 0.396258 | 5_4:+16034854 | Msa0840330:CDS |
| AAGTAAAGTCTCTCTGCTTC+TGG | 0.397454 | 5_4:-16036329 | None:intergenic |
| TACTTAACAATGCTTAGTTC+AGG | 0.400129 | 5_4:+16033879 | Msa0840330:CDS |
| GCTTGGGAATATGGGGTTAG+TGG | 0.406460 | 5_4:+16032694 | Msa0840330:CDS |
| GAGACTTTACTTGCTTGAAA+AGG | 0.407413 | 5_4:+16036340 | Msa0840330:CDS |
| ACAAATTACTGTGGTTGAAA+AGG | 0.407890 | 5_4:+16035231 | Msa0840330:CDS |
| GGCTGTGATTGCTATAGGAT+GGG | 0.409974 | 5_4:+16036154 | Msa0840330:CDS |
| AACAAAGCAGGAGTATCTTT+AGG | 0.410869 | 5_4:+16034908 | Msa0840330:CDS |
| TTTCATTTAGTGGTAAATCA+AGG | 0.413249 | 5_4:-16034357 | None:intergenic |
| AACTCATAAGGGCTACTTGT+TGG | 0.414176 | 5_4:+16034270 | Msa0840330:CDS |
| GCTATAGGATGGGGTACAAT+AGG | 0.414755 | 5_4:+16036164 | Msa0840330:CDS |
| CATTTCTTCCACTTGTATCA+AGG | 0.418374 | 5_4:-16035105 | None:intergenic |
| TTCAACCACAGTAATTTGTT+TGG | 0.425343 | 5_4:-16035227 | None:intergenic |
| AAGGCCTTCATCAACTCATA+AGG | 0.426059 | 5_4:+16034258 | Msa0840330:CDS |
| CTAGGGTTTGGATGTTTCAT+GGG | 0.427027 | 5_4:+16034866 | Msa0840330:CDS |
| ATCAAGGCTACAGCAGTAGC+TGG | 0.430037 | 5_4:-16034406 | None:intergenic |
| TGGCTAGAGAAGAGATATGT+TGG | 0.430195 | 5_4:+16032446 | Msa0840330:CDS |
| TGCAAAGCTCTAATGTTGCT+TGG | 0.437644 | 5_4:+16032677 | Msa0840330:CDS |
| TGGATTGTGAAATGGGGTAT+TGG | 0.439736 | 5_4:+16035313 | Msa0840330:CDS |
| TGCTAGTGTCATAGTGTCTC+AGG | 0.441520 | 5_4:+16032529 | Msa0840330:CDS |
| AGACAAGCAAGTTTCTTTGA+AGG | 0.441986 | 5_4:+16031939 | Msa0840330:CDS |
| ACTCATAAGGGCTACTTGTT+GGG | 0.442063 | 5_4:+16034271 | Msa0840330:CDS |
| TGGAGAAAAGCAAATGCAAT+TGG | 0.444411 | 5_4:+16034998 | Msa0840330:CDS |
| CAAGTTGCATACAATCATAC+AGG | 0.449366 | 5_4:+16036301 | Msa0840330:CDS |
| AGAAATGCACCAATGCTTGC+TGG | 0.451705 | 5_4:+16035121 | Msa0840330:CDS |
| GGCAAACCTGTGCTTAATCA+AGG | 0.453342 | 5_4:+16031960 | Msa0840330:CDS |
| GTATCAAGAGGTGTTGTCCT+AGG | 0.454277 | 5_4:+16034848 | Msa0840330:CDS |
| GTTTGTTCTGCAGTGGACTT+GGG | 0.455839 | 5_4:+16032642 | Msa0840330:intron |
| GCAAAGCTCTAATGTTGCTT+GGG | 0.458988 | 5_4:+16032678 | Msa0840330:CDS |
| ACATTCCTAGAATAACAGTT+TGG | 0.462878 | 5_4:-16036235 | None:intergenic |
| TCACACACAGTATGAGCATA+TGG | 0.463157 | 5_4:-16032915 | None:intergenic |
| CCTATTCTTTCCCTCCCTGC+AGG | 0.465355 | 5_4:+16035364 | Msa0840330:CDS |
| GGCTATAGAGATTAAAAGAA+AGG | 0.466560 | 5_4:+16032890 | Msa0840330:CDS |
| GGGCTGTGATTGCTATAGGA+TGG | 0.471111 | 5_4:+16036153 | Msa0840330:CDS |
| TCTGTTACAAAGATAGAGTA+TGG | 0.473381 | 5_4:+16035073 | Msa0840330:CDS |
| GCTACTGCTGTAGCCTTGAT+GGG | 0.475986 | 5_4:+16034409 | Msa0840330:CDS |
| CAATCTTGTGGTCCTGTTAG+TGG | 0.476528 | 5_4:+16033840 | Msa0840330:CDS |
| AGCTATATACATTCTGTCAT+AGG | 0.479672 | 5_4:+16033378 | Msa0840330:CDS |
| CTTTACCAATAATAGAGAGC+TGG | 0.479765 | 5_4:+16036204 | Msa0840330:CDS |
| TTGTCATGAAGCAGAAGAAA+AGG | 0.481576 | 5_4:-16033206 | None:intergenic |
| ATCAGGGCAGTGACTTCAGC+TGG | 0.484119 | 5_4:+16034731 | Msa0840330:intron |
| GGATGGATGTACCTTGCAAT+GGG | 0.485206 | 5_4:+16034929 | Msa0840330:CDS |
| AAATGACAGACTCGTGGAAA+AGG | 0.489314 | 5_4:+16036262 | Msa0840330:CDS |
| GGATGTGAAAGAAGAATGTA+AGG | 0.497106 | 5_4:-16036450 | None:intergenic |
| GAACCATTCCGAGGTGTGGC+GGG | 0.500050 | 5_4:-16032471 | None:intergenic |
| AAGCATGGTAAGAAGAAGAA+TGG | 0.504014 | 5_4:-16034443 | None:intergenic |
| ACGGCTATGTTACTTCTTGG+TGG | 0.507992 | 5_4:+16033240 | Msa0840330:CDS |
| GCACCTTATAAATCTTACAT+AGG | 0.510298 | 5_4:-16036395 | None:intergenic |
| CTCAGAGTTACCTGCAGGGA+GGG | 0.513856 | 5_4:-16035374 | None:intergenic |
| ATGCTGTTTGTAGCATGTTG+TGG | 0.515060 | 5_4:+16035179 | Msa0840330:CDS |
| TTCATTTAGTGGTAAATCAA+GGG | 0.515608 | 5_4:-16034356 | None:intergenic |
| TCAAGGCTACAGCAGTAGCT+GGG | 0.516424 | 5_4:-16034405 | None:intergenic |
| AGGCCTTCATCAACTCATAA+GGG | 0.516720 | 5_4:+16034259 | Msa0840330:CDS |
| TCTTCTTTAAACTCTTCCAC+TGG | 0.518305 | 5_4:-16035268 | None:intergenic |
| TTTACCAATAATAGAGAGCT+GGG | 0.522177 | 5_4:+16036205 | Msa0840330:CDS |
| GGATCCACCTTTCCCCATCA+AGG | 0.530326 | 5_4:-16034422 | None:intergenic |
| ACAAGGTTTCCAGCAAGCAT+TGG | 0.532587 | 5_4:-16035130 | None:intergenic |
| TATCAAGAGGTGTTGTCCTA+GGG | 0.532603 | 5_4:+16034849 | Msa0840330:CDS |
| CATGGTGTGATATAGGATCT+TGG | 0.534266 | 5_4:-16033815 | None:intergenic |
| CCACTAAATGAAAGTGAGGC+AGG | 0.534340 | 5_4:+16034367 | Msa0840330:CDS |
| TACTATCATCAAAATGGAGG+TGG | 0.536382 | 5_4:+16031909 | Msa0840330:CDS |
| TCCTAGAATAACAGTTTGGA+TGG | 0.536458 | 5_4:-16036231 | None:intergenic |
| AGGATGGATGTACCTTGCAA+TGG | 0.537626 | 5_4:+16034928 | Msa0840330:CDS |
| GGCTAGAGAAGAGATATGTT+GGG | 0.538258 | 5_4:+16032447 | Msa0840330:CDS |
| CCTGTGCTTAATCAAGGGGT+TGG | 0.539331 | 5_4:+16031966 | Msa0840330:CDS |
| CCAACCCCTTGATTAAGCAC+AGG | 0.540284 | 5_4:-16031966 | None:intergenic |
| AATGAAAGTGAGGCAGGTCG+TGG | 0.540964 | 5_4:+16034373 | Msa0840330:CDS |
| GGACCTTTCTGGTATGCTAG+TGG | 0.542219 | 5_4:+16032715 | Msa0840330:CDS |
| TCGGAATGGTTCAATACAGC+AGG | 0.542256 | 5_4:+16032482 | Msa0840330:CDS |
| TGCTAGTGGAGCTACCATCC+AGG | 0.544948 | 5_4:+16032729 | Msa0840330:CDS |
| GTAATTGTCTATACACTAGC+TGG | 0.551285 | 5_4:+16033330 | Msa0840330:CDS |
| ATGATTACTAACCAAGAAAG+AGG | 0.553468 | 5_4:-16032033 | None:intergenic |
| TTAACAATGCTTAGTTCAGG+TGG | 0.556883 | 5_4:+16033882 | Msa0840330:CDS |
| TGTGGCCTCAGAACTATGAT+TGG | 0.557466 | 5_4:+16035197 | Msa0840330:CDS |
| TATACTTCTAGCAGTGAGCT+TGG | 0.561501 | 5_4:+16033735 | Msa0840330:CDS |
| CCTGCAGGGAGGGAAAGAAT+AGG | 0.562148 | 5_4:-16035364 | None:intergenic |
| GCAGGAAGAAATGTTAAGAC+AGG | 0.563802 | 5_4:+16032500 | Msa0840330:CDS |
| AAGATAAACCTTGATACAAG+TGG | 0.564857 | 5_4:+16035097 | Msa0840330:CDS |
| GATATCATATGTGCATAATG+AGG | 0.568161 | 5_4:-16034777 | None:intergenic |
| GCAGTTATACTAAACAAAGC+AGG | 0.571510 | 5_4:+16034896 | Msa0840330:CDS |
| TACATAAACCCTAATGCAAG+CGG | 0.572665 | 5_4:+16034809 | Msa0840330:CDS |
| AATGTAAGGTCTAGAAACGT+TGG | 0.573084 | 5_4:-16036436 | None:intergenic |
| GCAAACCTGTGCTTAATCAA+GGG | 0.573245 | 5_4:+16031961 | Msa0840330:CDS |
| AAGCAGGAGTATCTTTAGGA+TGG | 0.573501 | 5_4:+16034912 | Msa0840330:CDS |
| TGACAGACTCGTGGAAAAGG+TGG | 0.577684 | 5_4:+16036265 | Msa0840330:CDS |
| ATCACAGGGGAGTTCAGCAA+AGG | 0.579430 | 5_4:+16036116 | Msa0840330:intron |
| CCATGAAACATCCAAACCCT+AGG | 0.579518 | 5_4:-16034865 | None:intergenic |
| GCTAGCTTTCTAATACCACT+TGG | 0.582232 | 5_4:+16033306 | Msa0840330:CDS |
| TTGCTAGAAAATTCAAAGGG+TGG | 0.585446 | 5_4:-16031885 | None:intergenic |
| GTATTTGCTAGAAAATTCAA+AGG | 0.588449 | 5_4:-16031889 | None:intergenic |
| TATTGAACCATTCCGAGGTG+TGG | 0.589233 | 5_4:-16032475 | None:intergenic |
| CAAGGCTACAGCAGTAGCTG+GGG | 0.589460 | 5_4:-16034404 | None:intergenic |
| TCACAGGGGAGTTCAGCAAA+GGG | 0.590204 | 5_4:+16036117 | Msa0840330:intron |
| CATGACAAATATAATTGTAA+CGG | 0.591074 | 5_4:+16033221 | Msa0840330:CDS |
| TAATGTTGCTTGGGAATATG+GGG | 0.591678 | 5_4:+16032687 | Msa0840330:CDS |
| GCTGTAGCCTTGATGGGGAA+AGG | 0.592024 | 5_4:+16034415 | Msa0840330:CDS |
| GCTGTGATTGCTATAGGATG+GGG | 0.593161 | 5_4:+16036155 | Msa0840330:CDS |
| TATTTGCTAGAAAATTCAAA+GGG | 0.594519 | 5_4:-16031888 | None:intergenic |
| ATATGAACTCCTTACCTGGA+TGG | 0.594588 | 5_4:-16032743 | None:intergenic |
| TGAACCATTCCGAGGTGTGG+CGG | 0.597924 | 5_4:-16032472 | None:intergenic |
| TCACACCATGGGCAATCTTG+TGG | 0.600054 | 5_4:+16033828 | Msa0840330:CDS |
| CTCCAGTTAGTATAGAAACA+AGG | 0.602432 | 5_4:-16035147 | None:intergenic |
| TAGCCCTTATGAGTTGATGA+AGG | 0.606788 | 5_4:-16034262 | None:intergenic |
| TGTTGGGTCCCGCCACACCT+CGG | 0.609017 | 5_4:+16032463 | Msa0840330:CDS |
| GCTCCACTAGCATACCAGAA+AGG | 0.609037 | 5_4:-16032718 | None:intergenic |
| CACTGCTAGAAGTATAGACC+AGG | 0.609126 | 5_4:-16033728 | None:intergenic |
| CATAAGGGCTACTTGTTGGG+AGG | 0.609577 | 5_4:+16034274 | Msa0840330:CDS |
| TTTACCACTAAATGAAAGTG+AGG | 0.610179 | 5_4:+16034363 | Msa0840330:CDS |
| TATATAGCTTGCTAAGAATG+TGG | 0.612716 | 5_4:-16033364 | None:intergenic |
| AATTGGAGCAATTCTTGGAA+CGG | 0.613648 | 5_4:+16035015 | Msa0840330:CDS |
| CTTGTTTCTATACTAACTGG+AGG | 0.616805 | 5_4:+16035148 | Msa0840330:CDS |
| CAAACCTGTGCTTAATCAAG+GGG | 0.620821 | 5_4:+16031962 | Msa0840330:CDS |
| AAGCGATTGTAAACAACACT+CGG | 0.625276 | 5_4:-16033762 | None:intergenic |
| TTAAAGAAGAAAAGTTAACA+AGG | 0.630039 | 5_4:+16035281 | Msa0840330:CDS |
| GTTTACAAATGACAGACTCG+TGG | 0.631670 | 5_4:+16036256 | Msa0840330:CDS |
| TAAAGAAGAAAAGTTAACAA+GGG | 0.632578 | 5_4:+16035282 | Msa0840330:CDS |
| AAAGTTTGGATTGTGAAATG+GGG | 0.632622 | 5_4:+16035307 | Msa0840330:CDS |
| AAATACTATCATCAAAATGG+AGG | 0.635967 | 5_4:+16031906 | Msa0840330:CDS |
| TGCTGTATTGAACCATTCCG+AGG | 0.637779 | 5_4:-16032480 | None:intergenic |
| GTGTTCTTGGAATAATCACA+TGG | 0.637837 | 5_4:+16035047 | Msa0840330:CDS |
| AAAATCCTCAGAGTATCAAG+AGG | 0.639360 | 5_4:+16034836 | Msa0840330:CDS |
| CAAGATCCTATATCACACCA+TGG | 0.641417 | 5_4:+16033816 | Msa0840330:CDS |
| GTAGCCTTGATGGGGAAAGG+TGG | 0.641774 | 5_4:+16034418 | Msa0840330:CDS |
| ATTGTCTATACACTAGCTGG+TGG | 0.645731 | 5_4:+16033333 | Msa0840330:CDS |
| AAGATCCTATATCACACCAT+GGG | 0.648778 | 5_4:+16033817 | Msa0840330:CDS |
| GTATAGACAATTACTCCAAG+TGG | 0.651625 | 5_4:-16033321 | None:intergenic |
| CAGGACCACAAGATTGCCCA+TGG | 0.652413 | 5_4:-16033833 | None:intergenic |
| GGGTGAGTGCTATTGCAGCA+AGG | 0.654770 | 5_4:+16034239 | Msa0840330:CDS |
| GTGCTCCAATCATAGTTCTG+AGG | 0.655203 | 5_4:-16035202 | None:intergenic |
| GGAAAAGACTGATTTGCCAG+TGG | 0.659563 | 5_4:+16035252 | Msa0840330:CDS |
| GCTTACATTGTCAACAAACA+CGG | 0.660565 | 5_4:-16033946 | None:intergenic |
| TGTGTGAAATTGTCAAAGCT+CGG | 0.666874 | 5_4:+16032931 | Msa0840330:CDS |
| CCTGTTAGTGGAAATCACAA+AGG | 0.667554 | 5_4:+16033852 | Msa0840330:CDS |
| CTACTGCTGTAGCCTTGATG+GGG | 0.672744 | 5_4:+16034410 | Msa0840330:CDS |
| CAACACCTCTTGATACTCTG+AGG | 0.681682 | 5_4:-16034841 | None:intergenic |
| CCAACTCAGAGTTACCTGCA+GGG | 0.681921 | 5_4:-16035378 | None:intergenic |
| CACTACCAAACAAATTACTG+TGG | 0.692164 | 5_4:+16035222 | Msa0840330:CDS |
| ACTCAGAGTTACCTGCAGGG+AGG | 0.701035 | 5_4:-16035375 | None:intergenic |
| AAGGCTACAGCAGTAGCTGG+GGG | 0.702815 | 5_4:-16034403 | None:intergenic |
| ATCTTACATAGGAAGCTCTG+AGG | 0.725309 | 5_4:-16036384 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAACTATATAAAAAG+TGG | - | chr5_4:16034086-16034105 | None:intergenic | 10.0% |
| !! | AAATTAAAGAAATTTCAAAT+TGG | + | chr5_4:16034561-16034580 | Msa0840330:intron | 10.0% |
| !!! | TTAAAAAATTTCAATTTTAG+GGG | - | chr5_4:16034587-16034606 | None:intergenic | 10.0% |
| !! | ATAAATATATTAAAATCATC+AGG | - | chr5_4:16034710-16034729 | None:intergenic | 10.0% |
| !!! | AAAAAAAATATGTTTTTGTT+AGG | + | chr5_4:16035825-16035844 | Msa0840330:intron | 10.0% |
| !! | TTGAATGTTAAGATATATAA+GGG | - | chr5_4:16032619-16032638 | None:intergenic | 15.0% |
| !! | ATTGAATGTTAAGATATATA+AGG | - | chr5_4:16032620-16032639 | None:intergenic | 15.0% |
| !! | AAATACAAAGTATGATTAAA+GGG | + | chr5_4:16034114-16034133 | Msa0840330:intron | 15.0% |
| !! | TCTTTAAATGTGAAATATTT+AGG | + | chr5_4:16034210-16034229 | Msa0840330:intron | 15.0% |
| !! | CTTTAAATGTGAAATATTTA+GGG | + | chr5_4:16034211-16034230 | Msa0840330:intron | 15.0% |
| !!! | TATTTGCTAGAAAATTCAAA+GGG | - | chr5_4:16031891-16031910 | None:intergenic | 20.0% |
| !! | AATAAAATGTCACTAATTTG+AGG | - | chr5_4:16032594-16032613 | None:intergenic | 20.0% |
| !!! | AACTCAAAGTTTTGATATAT+TGG | + | chr5_4:16032798-16032817 | Msa0840330:intron | 20.0% |
| !!! | AGTTTTGATATATTGGAATT+TGG | + | chr5_4:16032805-16032824 | Msa0840330:intron | 20.0% |
| !! | ATATATTGGAATTTGGAAAA+TGG | + | chr5_4:16032812-16032831 | Msa0840330:intron | 20.0% |
| !! | CATGACAAATATAATTGTAA+CGG | + | chr5_4:16033221-16033240 | Msa0840330:CDS | 20.0% |
| !! | TAATCTCAATGTTAATATTG+TGG | - | chr5_4:16033432-16033451 | None:intergenic | 20.0% |
| !! | TAAATGAATCAGAATGTTAA+TGG | - | chr5_4:16033608-16033627 | None:intergenic | 20.0% |
| !! | ATAAATGAATCAAAATGAAC+AGG | - | chr5_4:16033637-16033656 | None:intergenic | 20.0% |
| !! | GAAATACAAAGTATGATTAA+AGG | + | chr5_4:16034113-16034132 | Msa0840330:intron | 20.0% |
| !! | AATCATCAGGTAAAATAATA+AGG | - | chr5_4:16034697-16034716 | None:intergenic | 20.0% |
| !! | TTAAAGAAGAAAAGTTAACA+AGG | + | chr5_4:16035281-16035300 | Msa0840330:CDS | 20.0% |
| !! | TAAAGAAGAAAAGTTAACAA+GGG | + | chr5_4:16035282-16035301 | Msa0840330:CDS | 20.0% |
| !!! | AAGTTTGTTAAGAGAAATTA+GGG | + | chr5_4:16035733-16035752 | Msa0840330:intron | 20.0% |
| !!! | CTAGAAAAAAAACACAATTT+TGG | - | chr5_4:16035871-16035890 | None:intergenic | 20.0% |
| !! | TTTGTTTATTCATTATCACA+GGG | + | chr5_4:16036102-16036121 | Msa0840330:intron | 20.0% |
| !! | GTATTTGCTAGAAAATTCAA+AGG | - | chr5_4:16031892-16031911 | None:intergenic | 25.0% |
| ! | AGCAAATACTATCATCAAAA+TGG | + | chr5_4:16031903-16031922 | Msa0840330:CDS | 25.0% |
| ! | AAATACTATCATCAAAATGG+AGG | + | chr5_4:16031906-16031925 | Msa0840330:CDS | 25.0% |
| !! | TATTCTATCATTCTTGGTTT+TGG | + | chr5_4:16031990-16032009 | Msa0840330:CDS | 25.0% |
| ! | GAAAGGAAGATACTTATTTA+AGG | - | chr5_4:16032059-16032078 | None:intergenic | 25.0% |
| ! | ACTTGTACAACATATAAGAA+AGG | - | chr5_4:16032076-16032095 | None:intergenic | 25.0% |
| !! | TGAATGAATTTGGTTTAGTT+TGG | - | chr5_4:16032375-16032394 | None:intergenic | 25.0% |
| ! | CTAAACCAAATTCATTCATT+TGG | + | chr5_4:16032377-16032396 | Msa0840330:intron | 25.0% |
| ! | TGTATCAAACAAATTCAACA+TGG | - | chr5_4:16032405-16032424 | None:intergenic | 25.0% |
| ! | TATGATCAGGTAATGTTATT+TGG | + | chr5_4:16032861-16032880 | Msa0840330:intron | 25.0% |
| !! | GGTAATGTTATTTGGAATTA+TGG | + | chr5_4:16032869-16032888 | Msa0840330:intron | 25.0% |
| ! | ACAAAGAAATACACAGTTTA+AGG | - | chr5_4:16033667-16033686 | None:intergenic | 25.0% |
| !! | TTTGGGATTATTAACATTGT+TGG | + | chr5_4:16033912-16033931 | Msa0840330:CDS | 25.0% |
| ! | TTCATTTAGTGGTAAATCAA+GGG | - | chr5_4:16034359-16034378 | None:intergenic | 25.0% |
| ! | TTTCATTTAGTGGTAAATCA+AGG | - | chr5_4:16034360-16034379 | None:intergenic | 25.0% |
| ! | TGTAACTTACATAAAAAGCA+TGG | - | chr5_4:16034461-16034480 | None:intergenic | 25.0% |
| !!! | TAGACAAAAGTATTTCCAAA+AGG | - | chr5_4:16034492-16034511 | None:intergenic | 25.0% |
| ! | TTGTCTACTCTAGATAAAAT+TGG | + | chr5_4:16034505-16034524 | Msa0840330:intron | 25.0% |
| ! | ATAAAATTGGAATAGCCAAA+GGG | + | chr5_4:16034518-16034537 | Msa0840330:intron | 25.0% |
| !! | TTTAAATTTTGTTACACCTG+AGG | + | chr5_4:16034602-16034621 | Msa0840330:intron | 25.0% |
| ! | TAAAGTTTGGATTGTGAAAT+GGG | + | chr5_4:16035306-16035325 | Msa0840330:CDS | 25.0% |
| !!! | CTGTTTTGATAGTTATACTA+TGG | + | chr5_4:16035341-16035360 | Msa0840330:CDS | 25.0% |
| ! | ATACATCAACAATGACAATT+AGG | + | chr5_4:16035435-16035454 | Msa0840330:intron | 25.0% |
| ! | TTACTTGTCATACTAATGAT+AGG | + | chr5_4:16035676-16035695 | Msa0840330:intron | 25.0% |
| ! | ACTTGTTTACATTGTATGAA+GGG | - | chr5_4:16035717-16035736 | None:intergenic | 25.0% |
| !! | AACTTGTTTACATTGTATGA+AGG | - | chr5_4:16035718-16035737 | None:intergenic | 25.0% |
| !!! | CAAGTTTGTTAAGAGAAATT+AGG | + | chr5_4:16035732-16035751 | Msa0840330:intron | 25.0% |
| !! | TGATTTTTGTGAAATGTAAG+GGG | - | chr5_4:16035773-16035792 | None:intergenic | 25.0% |
| !! | GTGATTTTTGTGAAATGTAA+GGG | - | chr5_4:16035774-16035793 | None:intergenic | 25.0% |
| !! | TGTGATTTTTGTGAAATGTA+AGG | - | chr5_4:16035775-16035794 | None:intergenic | 25.0% |
| !!! | TTCTGAAGTATACTTCTAAA+TGG | + | chr5_4:16035800-16035819 | Msa0840330:intron | 25.0% |
| ! | TATAAATCAAACTACTACGA+GGG | - | chr5_4:16035943-16035962 | None:intergenic | 25.0% |
| ! | TTATAAATCAAACTACTACG+AGG | - | chr5_4:16035944-16035963 | None:intergenic | 25.0% |
| !! | GTAATATTTAGAATGCATAG+AGG | - | chr5_4:16035975-16035994 | None:intergenic | 25.0% |
| ! | GTTTGTTTATTCATTATCAC+AGG | + | chr5_4:16036101-16036120 | Msa0840330:intron | 25.0% |
| ! | TTGTTTATTCATTATCACAG+GGG | + | chr5_4:16036103-16036122 | Msa0840330:intron | 25.0% |
| ! | CTTCCTATGTAAGATTTATA+AGG | + | chr5_4:16036392-16036411 | Msa0840330:exon | 25.0% |
| !!! | TTGGTGATTTTGATACAATT+TGG | - | chr5_4:16036420-16036439 | None:intergenic | 25.0% |
| ACACTTCTTTCTTTCTTTCA+TGG | + | chr5_4:16031845-16031864 | Msa0840330:exon | 30.0% | |
| GTTGGATATTCTATCATTCT+TGG | + | chr5_4:16031984-16032003 | Msa0840330:CDS | 30.0% | |
| ATGATTACTAACCAAGAAAG+AGG | - | chr5_4:16032036-16032055 | None:intergenic | 30.0% | |
| AGTGTGACTAAAACTCTATT+TGG | - | chr5_4:16032270-16032289 | None:intergenic | 30.0% | |
| TACAAACTTCCTTATTGAAC+AGG | + | chr5_4:16032421-16032440 | Msa0840330:intron | 30.0% | |
| ! | ATTTGAGGTTTGTAAAAGTG+TGG | - | chr5_4:16032579-16032598 | None:intergenic | 30.0% |
| TATAATATGAACTCCTTACC+TGG | - | chr5_4:16032750-16032769 | None:intergenic | 30.0% | |
| GGTAAGGAGTTCATATTATA+AGG | + | chr5_4:16032750-16032769 | Msa0840330:intron | 30.0% | |
| TTGGAATTTGGAAAATGGAA+AGG | + | chr5_4:16032817-16032836 | Msa0840330:intron | 30.0% | |
| GGCTATAGAGATTAAAAGAA+AGG | + | chr5_4:16032890-16032909 | Msa0840330:CDS | 30.0% | |
| CTGTAAAACCTATTTAGTGT+AGG | + | chr5_4:16033071-16033090 | Msa0840330:intron | 30.0% | |
| !! | TATATAGCTTGCTAAGAATG+TGG | - | chr5_4:16033367-16033386 | None:intergenic | 30.0% |
| AGCTATATACATTCTGTCAT+AGG | + | chr5_4:16033378-16033397 | Msa0840330:CDS | 30.0% | |
| TCTCAATGTTAATATTGTGG+AGG | - | chr5_4:16033429-16033448 | None:intergenic | 30.0% | |
| TACTGTAAAAGTCATACGAA+AGG | - | chr5_4:16033510-16033529 | None:intergenic | 30.0% | |
| TACTTAACAATGCTTAGTTC+AGG | + | chr5_4:16033879-16033898 | Msa0840330:CDS | 30.0% | |
| ATTAACATTGTTGGCAACTT+TGG | + | chr5_4:16033921-16033940 | Msa0840330:CDS | 30.0% | |
| ! | TGTGAAATATTTAGGGCTAT+TGG | + | chr5_4:16034218-16034237 | Msa0840330:intron | 30.0% |
| ! | GTGAAATATTTAGGGCTATT+GGG | + | chr5_4:16034219-16034238 | Msa0840330:intron | 30.0% |
| TTTACCACTAAATGAAAGTG+AGG | + | chr5_4:16034363-16034382 | Msa0840330:CDS | 30.0% | |
| GATAAAATTGGAATAGCCAA+AGG | + | chr5_4:16034517-16034536 | Msa0840330:intron | 30.0% | |
| ACTAAATTACTTGAACCCTT+TGG | - | chr5_4:16034536-16034555 | None:intergenic | 30.0% | |
| GATATCATATGTGCATAATG+AGG | - | chr5_4:16034780-16034799 | None:intergenic | 30.0% | |
| TCTGTTACAAAGATAGAGTA+TGG | + | chr5_4:16035073-16035092 | Msa0840330:CDS | 30.0% | |
| AAGATAAACCTTGATACAAG+TGG | + | chr5_4:16035097-16035116 | Msa0840330:CDS | 30.0% | |
| !! | AACCTTGTTTCTATACTAAC+TGG | + | chr5_4:16035145-16035164 | Msa0840330:CDS | 30.0% |
| !! | TTCAACCACAGTAATTTGTT+TGG | - | chr5_4:16035230-16035249 | None:intergenic | 30.0% |
| ACAAATTACTGTGGTTGAAA+AGG | + | chr5_4:16035231-16035250 | Msa0840330:CDS | 30.0% | |
| CTAAAGTTTGGATTGTGAAA+TGG | + | chr5_4:16035305-16035324 | Msa0840330:CDS | 30.0% | |
| AAAGTTTGGATTGTGAAATG+GGG | + | chr5_4:16035307-16035326 | Msa0840330:CDS | 30.0% | |
| CTTCCATCCAAATAACTTAT+TGG | + | chr5_4:16035499-16035518 | Msa0840330:intron | 30.0% | |
| AATTCCGCCAATAAGTTATT+TGG | - | chr5_4:16035509-16035528 | None:intergenic | 30.0% | |
| CAAACTACACAAATAAGTCA+TGG | - | chr5_4:16035590-16035609 | None:intergenic | 30.0% | |
| TGTAATTTCAAAATCACGTG+TGG | + | chr5_4:16035614-16035633 | Msa0840330:intron | 30.0% | |
| TTAGTATGACAAGTAAGTCA+TGG | - | chr5_4:16035672-16035691 | None:intergenic | 30.0% | |
| TTGTTTACATTGTATGAAGG+GGG | - | chr5_4:16035715-16035734 | None:intergenic | 30.0% | |
| CTTGTTTACATTGTATGAAG+GGG | - | chr5_4:16035716-16035735 | None:intergenic | 30.0% | |
| AGTTTGTCAAATCTCAAAAC+AGG | + | chr5_4:16036022-16036041 | Msa0840330:intron | 30.0% | |
| TTTACCAATAATAGAGAGCT+GGG | + | chr5_4:16036205-16036224 | Msa0840330:CDS | 30.0% | |
| ACATTCCTAGAATAACAGTT+TGG | - | chr5_4:16036238-16036257 | None:intergenic | 30.0% | |
| GCACCTTATAAATCTTACAT+AGG | - | chr5_4:16036398-16036417 | None:intergenic | 30.0% | |
| TTGCTAGAAAATTCAAAGGG+TGG | - | chr5_4:16031888-16031907 | None:intergenic | 35.0% | |
| TACTATCATCAAAATGGAGG+TGG | + | chr5_4:16031909-16031928 | Msa0840330:CDS | 35.0% | |
| AGACAAGCAAGTTTCTTTGA+AGG | + | chr5_4:16031939-16031958 | Msa0840330:CDS | 35.0% | |
| AAAACCATAATCATAGCCCT+TGG | + | chr5_4:16032158-16032177 | Msa0840330:intron | 35.0% | |
| ACTTTAAACTTGTAGGTGGA+AGG | - | chr5_4:16032347-16032366 | None:intergenic | 35.0% | |
| ACACACTTTAAACTTGTAGG+TGG | - | chr5_4:16032351-16032370 | None:intergenic | 35.0% | |
| GGAACACACTTTAAACTTGT+AGG | - | chr5_4:16032354-16032373 | None:intergenic | 35.0% | |
| TGGCACCAAATGAATGAATT+TGG | - | chr5_4:16032385-16032404 | None:intergenic | 35.0% | |
| ACTTCCTTATTGAACAGGTA+TGG | + | chr5_4:16032426-16032445 | Msa0840330:intron | 35.0% | |
| ! | TCAATTTGTTTGTTCTGCAG+TGG | + | chr5_4:16032635-16032654 | Msa0840330:intron | 35.0% |
| ! | TCTAATGTTGCTTGGGAATA+TGG | + | chr5_4:16032685-16032704 | Msa0840330:CDS | 35.0% |
| ! | CTAATGTTGCTTGGGAATAT+GGG | + | chr5_4:16032686-16032705 | Msa0840330:CDS | 35.0% |
| ! | TAATGTTGCTTGGGAATATG+GGG | + | chr5_4:16032687-16032706 | Msa0840330:CDS | 35.0% |
| GGAAAATGGAAAGGCTAATA+AGG | + | chr5_4:16032826-16032845 | Msa0840330:intron | 35.0% | |
| TGTGTGAAATTGTCAAAGCT+CGG | + | chr5_4:16032931-16032950 | Msa0840330:CDS | 35.0% | |
| TCAATGCACCTACACTAAAT+AGG | - | chr5_4:16033082-16033101 | None:intergenic | 35.0% | |
| !! | TTTTGTTTGTTTACCGCAGT+TGG | + | chr5_4:16033160-16033179 | Msa0840330:intron | 35.0% |
| TTTGTTTGTTTACCGCAGTT+GGG | + | chr5_4:16033161-16033180 | Msa0840330:intron | 35.0% | |
| TTGTCATGAAGCAGAAGAAA+AGG | - | chr5_4:16033209-16033228 | None:intergenic | 35.0% | |
| GCTGTTGTAAATGCATTAAC+TGG | + | chr5_4:16033267-16033286 | Msa0840330:CDS | 35.0% | |
| GTATAGACAATTACTCCAAG+TGG | - | chr5_4:16033324-16033343 | None:intergenic | 35.0% | |
| GTAATTGTCTATACACTAGC+TGG | + | chr5_4:16033330-16033349 | Msa0840330:CDS | 35.0% | |
| ! | ATTTTCAGTGCACGTTGTTT+TGG | + | chr5_4:16033692-16033711 | Msa0840330:intron | 35.0% |
| !!! | TTTGGTCATTTTTGTGTACC+TGG | + | chr5_4:16033710-16033729 | Msa0840330:CDS | 35.0% |
| AAGCGATTGTAAACAACACT+CGG | - | chr5_4:16033765-16033784 | None:intergenic | 35.0% | |
| AAGATCCTATATCACACCAT+GGG | + | chr5_4:16033817-16033836 | Msa0840330:CDS | 35.0% | |
| TTAACAATGCTTAGTTCAGG+TGG | + | chr5_4:16033882-16033901 | Msa0840330:CDS | 35.0% | |
| GCTTACATTGTCAACAAACA+CGG | - | chr5_4:16033949-16033968 | None:intergenic | 35.0% | |
| TAAAGGGATAGCATGATGAA+AGG | + | chr5_4:16034130-16034149 | Msa0840330:intron | 35.0% | |
| AGTGATGTAGCCAAAGAAAA+TGG | - | chr5_4:16034319-16034338 | None:intergenic | 35.0% | |
| ! | TTTTCTTTGGCTACATCACT+TGG | + | chr5_4:16034319-16034338 | Msa0840330:CDS | 35.0% |
| AAGCATGGTAAGAAGAAGAA+TGG | - | chr5_4:16034446-16034465 | None:intergenic | 35.0% | |
| ! | AGTTACAATCTGCTACCTTT+TGG | + | chr5_4:16034474-16034493 | Msa0840330:intron | 35.0% |
| TACATAAACCCTAATGCAAG+CGG | + | chr5_4:16034809-16034828 | Msa0840330:CDS | 35.0% | |
| ! | TTTTCTTTCCGCTTGCATTA+GGG | - | chr5_4:16034820-16034839 | None:intergenic | 35.0% |
| ! | ATTTTCTTTCCGCTTGCATT+AGG | - | chr5_4:16034821-16034840 | None:intergenic | 35.0% |
| ! | AAAATCCTCAGAGTATCAAG+AGG | + | chr5_4:16034836-16034855 | Msa0840330:CDS | 35.0% |
| GCAGTTATACTAAACAAAGC+AGG | + | chr5_4:16034896-16034915 | Msa0840330:CDS | 35.0% | |
| !! | AACAAAGCAGGAGTATCTTT+AGG | + | chr5_4:16034908-16034927 | Msa0840330:CDS | 35.0% |
| CAATAAAAACTCCCATTGCA+AGG | - | chr5_4:16034943-16034962 | None:intergenic | 35.0% | |
| ! | CTTGCAATGGGAGTTTTTAT+TGG | + | chr5_4:16034941-16034960 | Msa0840330:CDS | 35.0% |
| ! | CATAGAAGCATGAAAGCAAT+AGG | - | chr5_4:16034980-16034999 | None:intergenic | 35.0% |
| CTATTGCTTTCATGCTTCTA+TGG | + | chr5_4:16034978-16034997 | Msa0840330:CDS | 35.0% | |
| TGGAGAAAAGCAAATGCAAT+TGG | + | chr5_4:16034998-16035017 | Msa0840330:CDS | 35.0% | |
| AATGCAATTGGAGCAATTCT+TGG | + | chr5_4:16035010-16035029 | Msa0840330:CDS | 35.0% | |
| AATTGGAGCAATTCTTGGAA+CGG | + | chr5_4:16035015-16035034 | Msa0840330:CDS | 35.0% | |
| GTGTTCTTGGAATAATCACA+TGG | + | chr5_4:16035047-16035066 | Msa0840330:CDS | 35.0% | |
| CATTTCTTCCACTTGTATCA+AGG | - | chr5_4:16035108-16035127 | None:intergenic | 35.0% | |
| CTCCAGTTAGTATAGAAACA+AGG | - | chr5_4:16035150-16035169 | None:intergenic | 35.0% | |
| !! | CTTGTTTCTATACTAACTGG+AGG | + | chr5_4:16035148-16035167 | Msa0840330:CDS | 35.0% |
| CACTACCAAACAAATTACTG+TGG | + | chr5_4:16035222-16035241 | Msa0840330:CDS | 35.0% | |
| TCTTCTTTAAACTCTTCCAC+TGG | - | chr5_4:16035271-16035290 | None:intergenic | 35.0% | |
| AGTTAACAAGGGCTAAAGTT+TGG | + | chr5_4:16035293-16035312 | Msa0840330:CDS | 35.0% | |
| CAACAATGACAATTAGGCTT+TGG | + | chr5_4:16035441-16035460 | Msa0840330:intron | 35.0% | |
| CCATCCAAATAACTTATTGG+CGG | + | chr5_4:16035502-16035521 | Msa0840330:intron | 35.0% | |
| !! | TGTACATCTGAACTGATTTG+GGG | - | chr5_4:16035539-16035558 | None:intergenic | 35.0% |
| ! | GTGTACATCTGAACTGATTT+GGG | - | chr5_4:16035540-16035559 | None:intergenic | 35.0% |
| TGTGTACATCTGAACTGATT+TGG | - | chr5_4:16035541-16035560 | None:intergenic | 35.0% | |
| !!! | CAAAATCACGTGTGGTTTTT+TGG | + | chr5_4:16035622-16035641 | Msa0840330:intron | 35.0% |
| !!! | TGTGGTTTTTTGGAAATGTG+AGG | + | chr5_4:16035632-16035651 | Msa0840330:intron | 35.0% |
| ! | TTTTTGTGAAATGTAAGGGG+TGG | - | chr5_4:16035770-16035789 | None:intergenic | 35.0% |
| CAAGTCATTTCAGATGTACA+GGG | - | chr5_4:16035894-16035913 | None:intergenic | 35.0% | |
| ACAAGTCATTTCAGATGTAC+AGG | - | chr5_4:16035895-16035914 | None:intergenic | 35.0% | |
| ! | TGTACATCTGAAATGACTTG+TGG | + | chr5_4:16035894-16035913 | Msa0840330:intron | 35.0% |
| ! | GTACATCTGAAATGACTTGT+GGG | + | chr5_4:16035895-16035914 | Msa0840330:intron | 35.0% |
| ! | AAACTACTACGAGGGATTTT+GGG | - | chr5_4:16035935-16035954 | None:intergenic | 35.0% |
| AACAGGTAGCATATCTGATT+TGG | + | chr5_4:16036039-16036058 | Msa0840330:intron | 35.0% | |
| !!! | CAAAGGGTACTTCTTTTTCT+GGG | + | chr5_4:16036133-16036152 | Msa0840330:CDS | 35.0% |
| CTTTACCAATAATAGAGAGC+TGG | + | chr5_4:16036204-16036223 | Msa0840330:CDS | 35.0% | |
| ACCATCCAAACTGTTATTCT+AGG | + | chr5_4:16036230-16036249 | Msa0840330:CDS | 35.0% | |
| TCCTAGAATAACAGTTTGGA+TGG | - | chr5_4:16036234-16036253 | None:intergenic | 35.0% | |
| CAAGTTGCATACAATCATAC+AGG | + | chr5_4:16036301-16036320 | Msa0840330:CDS | 35.0% | |
| GAGACTTTACTTGCTTGAAA+AGG | + | chr5_4:16036340-16036359 | Msa0840330:CDS | 35.0% | |
| !!! | CTCTGAGGCTTCTAATTTTT+TGG | - | chr5_4:16036372-16036391 | None:intergenic | 35.0% |
| AATGTAAGGTCTAGAAACGT+TGG | - | chr5_4:16036439-16036458 | None:intergenic | 35.0% | |
| GCAAACCTGTGCTTAATCAA+GGG | + | chr5_4:16031961-16031980 | Msa0840330:CDS | 40.0% | |
| CAAACCTGTGCTTAATCAAG+GGG | + | chr5_4:16031962-16031981 | Msa0840330:CDS | 40.0% | |
| ! | TGCTCTTTTCACCTCTTTCT+TGG | + | chr5_4:16032022-16032041 | Msa0840330:CDS | 40.0% |
| TGAACCAAGGGCTATGATTA+TGG | - | chr5_4:16032165-16032184 | None:intergenic | 40.0% | |
| TACTCCTATAGTCAGCCAAA+GGG | - | chr5_4:16032220-16032239 | None:intergenic | 40.0% | |
| ATACTCCTATAGTCAGCCAA+AGG | - | chr5_4:16032221-16032240 | None:intergenic | 40.0% | |
| !! | ACATTACACATTTTCGGGGA+GGG | - | chr5_4:16032306-16032325 | None:intergenic | 40.0% |
| TCCCCGAAAATGTGTAATGT+GGG | + | chr5_4:16032306-16032325 | Msa0840330:intron | 40.0% | |
| ! | TCCCCCACATTACACATTTT+CGG | - | chr5_4:16032312-16032331 | None:intergenic | 40.0% |
| TAATGTGGGGGATCAAATCT+TGG | + | chr5_4:16032320-16032339 | Msa0840330:intron | 40.0% | |
| CTAGCCATACCTGTTCAATA+AGG | - | chr5_4:16032433-16032452 | None:intergenic | 40.0% | |
| TGGCTAGAGAAGAGATATGT+TGG | + | chr5_4:16032446-16032465 | Msa0840330:CDS | 40.0% | |
| GGCTAGAGAAGAGATATGTT+GGG | + | chr5_4:16032447-16032466 | Msa0840330:CDS | 40.0% | |
| GCAGGAAGAAATGTTAAGAC+AGG | + | chr5_4:16032500-16032519 | Msa0840330:CDS | 40.0% | |
| AAGCAACATTAGAGCTTTGC+AGG | - | chr5_4:16032678-16032697 | None:intergenic | 40.0% | |
| ! | TGCAAAGCTCTAATGTTGCT+TGG | + | chr5_4:16032677-16032696 | Msa0840330:CDS | 40.0% |
| ! | GCAAAGCTCTAATGTTGCTT+GGG | + | chr5_4:16032678-16032697 | Msa0840330:CDS | 40.0% |
| ATATGAACTCCTTACCTGGA+TGG | - | chr5_4:16032746-16032765 | None:intergenic | 40.0% | |
| GCTGAGATTTGAGTATGATC+AGG | + | chr5_4:16032848-16032867 | Msa0840330:intron | 40.0% | |
| TCACACACAGTATGAGCATA+TGG | - | chr5_4:16032918-16032937 | None:intergenic | 40.0% | |
| TTGTTTGTTTACCGCAGTTG+GGG | + | chr5_4:16033162-16033181 | Msa0840330:intron | 40.0% | |
| ! | GTAACGGCTATGTTACTTCT+TGG | + | chr5_4:16033237-16033256 | Msa0840330:CDS | 40.0% |
| !! | GCTAGCTTTCTAATACCACT+TGG | + | chr5_4:16033306-16033325 | Msa0840330:CDS | 40.0% |
| ATTGTCTATACACTAGCTGG+TGG | + | chr5_4:16033333-16033352 | Msa0840330:CDS | 40.0% | |
| !! | TACACTAGCTGGTGGATTAA+AGG | + | chr5_4:16033341-16033360 | Msa0840330:CDS | 40.0% |
| TATACTTCTAGCAGTGAGCT+TGG | + | chr5_4:16033735-16033754 | Msa0840330:CDS | 40.0% | |
| CATGGTGTGATATAGGATCT+TGG | - | chr5_4:16033818-16033837 | None:intergenic | 40.0% | |
| CAAGATCCTATATCACACCA+TGG | + | chr5_4:16033816-16033835 | Msa0840330:CDS | 40.0% | |
| CCTTTGTGATTTCCACTAAC+AGG | - | chr5_4:16033855-16033874 | None:intergenic | 40.0% | |
| CCTGTTAGTGGAAATCACAA+AGG | + | chr5_4:16033852-16033871 | Msa0840330:CDS | 40.0% | |
| !! | AGTTCAGGTGGCTTAGTTTT+TGG | + | chr5_4:16033894-16033913 | Msa0840330:CDS | 40.0% |
| !! | GTTCAGGTGGCTTAGTTTTT+GGG | + | chr5_4:16033895-16033914 | Msa0840330:CDS | 40.0% |
| AAGGCCTTCATCAACTCATA+AGG | + | chr5_4:16034258-16034277 | Msa0840330:CDS | 40.0% | |
| AGGCCTTCATCAACTCATAA+GGG | + | chr5_4:16034259-16034278 | Msa0840330:CDS | 40.0% | |
| !! | TAGCCCTTATGAGTTGATGA+AGG | - | chr5_4:16034265-16034284 | None:intergenic | 40.0% |
| AACTCATAAGGGCTACTTGT+TGG | + | chr5_4:16034270-16034289 | Msa0840330:CDS | 40.0% | |
| ACTCATAAGGGCTACTTGTT+GGG | + | chr5_4:16034271-16034290 | Msa0840330:CDS | 40.0% | |
| !!! | GTTTGCAGTGCCATTTTCTT+TGG | + | chr5_4:16034306-16034325 | Msa0840330:CDS | 40.0% |
| TTTGGCTACATCACTTGGTT+TGG | + | chr5_4:16034324-16034343 | Msa0840330:CDS | 40.0% | |
| TTGGCTACATCACTTGGTTT+GGG | + | chr5_4:16034325-16034344 | Msa0840330:CDS | 40.0% | |
| GACAACGTTTCACACGTTTA+AGG | + | chr5_4:16034633-16034652 | Msa0840330:intron | 40.0% | |
| !! | TATCAAGAGGTGTTGTCCTA+GGG | + | chr5_4:16034849-16034868 | Msa0840330:CDS | 40.0% |
| CTAGGGTTTGGATGTTTCAT+GGG | + | chr5_4:16034866-16034885 | Msa0840330:CDS | 40.0% | |
| !! | AAGCAGGAGTATCTTTAGGA+TGG | + | chr5_4:16034912-16034931 | Msa0840330:CDS | 40.0% |
| GCAATTCTTGGAACGGTATT+TGG | + | chr5_4:16035022-16035041 | Msa0840330:CDS | 40.0% | |
| ACGGTATTTGGTTGTGTTCT+TGG | + | chr5_4:16035034-16035053 | Msa0840330:CDS | 40.0% | |
| ! | ATGCTGTTTGTAGCATGTTG+TGG | + | chr5_4:16035179-16035198 | Msa0840330:CDS | 40.0% |
| TGGATTGTGAAATGGGGTAT+TGG | + | chr5_4:16035313-16035332 | Msa0840330:CDS | 40.0% | |
| ! | TGACAATTAGGCTTTGGTCT+AGG | + | chr5_4:16035447-16035466 | Msa0840330:intron | 40.0% |
| ! | TAGGCTTTGGTCTAGGAAAA+AGG | + | chr5_4:16035454-16035473 | Msa0840330:intron | 40.0% |
| GCTAATGAAGTCCTTGCTTT+AGG | + | chr5_4:16035476-16035495 | Msa0840330:intron | 40.0% | |
| CCGCCAATAAGTTATTTGGA+TGG | - | chr5_4:16035505-16035524 | None:intergenic | 40.0% | |
| !! | GTACATCTGAACTGATTTGG+GGG | - | chr5_4:16035538-16035557 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGAAATGTGAGG+TGG | + | chr5_4:16035635-16035654 | Msa0840330:intron | 40.0% |
| ! | CAAACTACTACGAGGGATTT+TGG | - | chr5_4:16035936-16035955 | None:intergenic | 40.0% |
| !!! | GCAAAGGGTACTTCTTTTTC+TGG | + | chr5_4:16036132-16036151 | Msa0840330:CDS | 40.0% |
| GTATCCCAGCTCTCTATTAT+TGG | - | chr5_4:16036212-16036231 | None:intergenic | 40.0% | |
| GTTTACAAATGACAGACTCG+TGG | + | chr5_4:16036256-16036275 | Msa0840330:CDS | 40.0% | |
| AAATGACAGACTCGTGGAAA+AGG | + | chr5_4:16036262-16036281 | Msa0840330:CDS | 40.0% | |
| AAGTAAAGTCTCTCTGCTTC+TGG | - | chr5_4:16036332-16036351 | None:intergenic | 40.0% | |
| ATCTTACATAGGAAGCTCTG+AGG | - | chr5_4:16036387-16036406 | None:intergenic | 40.0% | |
| GGCAAACCTGTGCTTAATCA+AGG | + | chr5_4:16031960-16031979 | Msa0840330:CDS | 45.0% | |
| ! | GGATTCTGTTGGTGAACCAA+GGG | - | chr5_4:16032177-16032196 | None:intergenic | 45.0% |
| TGAGATACCTCGGATTCTGT+TGG | - | chr5_4:16032188-16032207 | None:intergenic | 45.0% | |
| ! | ACAGAATCCGAGGTATCTCA+CGG | + | chr5_4:16032188-16032207 | Msa0840330:intron | 45.0% |
| !! | CACATTACACATTTTCGGGG+AGG | - | chr5_4:16032307-16032326 | None:intergenic | 45.0% |
| CTCCCCGAAAATGTGTAATG+TGG | + | chr5_4:16032305-16032324 | Msa0840330:intron | 45.0% | |
| ! | CCCCACATTACACATTTTCG+GGG | - | chr5_4:16032310-16032329 | None:intergenic | 45.0% |
| CCCCGAAAATGTGTAATGTG+GGG | + | chr5_4:16032307-16032326 | Msa0840330:intron | 45.0% | |
| ! | CCCCCACATTACACATTTTC+GGG | - | chr5_4:16032311-16032330 | None:intergenic | 45.0% |
| CCCGAAAATGTGTAATGTGG+GGG | + | chr5_4:16032308-16032327 | Msa0840330:intron | 45.0% | |
| TATTGAACCATTCCGAGGTG+TGG | - | chr5_4:16032478-16032497 | None:intergenic | 45.0% | |
| TGCTGTATTGAACCATTCCG+AGG | - | chr5_4:16032483-16032502 | None:intergenic | 45.0% | |
| TCGGAATGGTTCAATACAGC+AGG | + | chr5_4:16032482-16032501 | Msa0840330:CDS | 45.0% | |
| TGCTAGTGTCATAGTGTCTC+AGG | + | chr5_4:16032529-16032548 | Msa0840330:CDS | 45.0% | |
| ! | TGTTTGTTCTGCAGTGGACT+TGG | + | chr5_4:16032641-16032660 | Msa0840330:intron | 45.0% |
| ! | GTTTGTTCTGCAGTGGACTT+GGG | + | chr5_4:16032642-16032661 | Msa0840330:intron | 45.0% |
| TGTTTGTTTACCGCAGTTGG+GGG | + | chr5_4:16033163-16033182 | Msa0840330:intron | 45.0% | |
| ! | ACGGCTATGTTACTTCTTGG+TGG | + | chr5_4:16033240-16033259 | Msa0840330:CDS | 45.0% |
| ! | CACTGCTAGAAGTATAGACC+AGG | - | chr5_4:16033731-16033750 | None:intergenic | 45.0% |
| GATTGCCCATGGTGTGATAT+AGG | - | chr5_4:16033825-16033844 | None:intergenic | 45.0% | |
| CAATCTTGTGGTCCTGTTAG+TGG | + | chr5_4:16033840-16033859 | Msa0840330:CDS | 45.0% | |
| CCTGCCTCACTTTCATTTAG+TGG | - | chr5_4:16034370-16034389 | None:intergenic | 45.0% | |
| CCACTAAATGAAAGTGAGGC+AGG | + | chr5_4:16034367-16034386 | Msa0840330:CDS | 45.0% | |
| ACGTTGTCACAATAGTCCTC+AGG | - | chr5_4:16034621-16034640 | None:intergenic | 45.0% | |
| CAACACCTCTTGATACTCTG+AGG | - | chr5_4:16034844-16034863 | None:intergenic | 45.0% | |
| !! | GTATCAAGAGGTGTTGTCCT+AGG | + | chr5_4:16034848-16034867 | Msa0840330:CDS | 45.0% |
| CCATGAAACATCCAAACCCT+AGG | - | chr5_4:16034868-16034887 | None:intergenic | 45.0% | |
| CCTAGGGTTTGGATGTTTCA+TGG | + | chr5_4:16034865-16034884 | Msa0840330:CDS | 45.0% | |
| AGGATGGATGTACCTTGCAA+TGG | + | chr5_4:16034928-16034947 | Msa0840330:CDS | 45.0% | |
| GGATGGATGTACCTTGCAAT+GGG | + | chr5_4:16034929-16034948 | Msa0840330:CDS | 45.0% | |
| AGAAATGCACCAATGCTTGC+TGG | + | chr5_4:16035121-16035140 | Msa0840330:CDS | 45.0% | |
| ACAAGGTTTCCAGCAAGCAT+TGG | - | chr5_4:16035133-16035152 | None:intergenic | 45.0% | |
| TGTGGCCTCAGAACTATGAT+TGG | + | chr5_4:16035197-16035216 | Msa0840330:CDS | 45.0% | |
| ! | GTGCTCCAATCATAGTTCTG+AGG | - | chr5_4:16035205-16035224 | None:intergenic | 45.0% |
| !! | GGAAAAGACTGATTTGCCAG+TGG | + | chr5_4:16035252-16035271 | Msa0840330:CDS | 45.0% |
| TTGGATGGAAGCCTAAAGCA+AGG | - | chr5_4:16035490-16035509 | None:intergenic | 45.0% | |
| !! | ATCTGAACTGATTTGGGGGT+GGG | - | chr5_4:16035534-16035553 | None:intergenic | 45.0% |
| ! | CATCTGAAATGACTTGTGGG+TGG | + | chr5_4:16035898-16035917 | Msa0840330:intron | 45.0% |
| TTCTGGGCTGTGATTGCTAT+AGG | + | chr5_4:16036149-16036168 | Msa0840330:CDS | 45.0% | |
| GGCTGTGATTGCTATAGGAT+GGG | + | chr5_4:16036154-16036173 | Msa0840330:CDS | 45.0% | |
| GCTGTGATTGCTATAGGATG+GGG | + | chr5_4:16036155-16036174 | Msa0840330:CDS | 45.0% | |
| GCTATAGGATGGGGTACAAT+AGG | + | chr5_4:16036164-16036183 | Msa0840330:CDS | 45.0% | |
| !!! | TTTAAAAAATTTCAATTTTA+GGG | - | chr5_4:16034588-16034607 | None:intergenic | 5.0% |
| !!! | ATTTAAAAAATTTCAATTTT+AGG | - | chr5_4:16034589-16034608 | None:intergenic | 5.0% |
| !!! | ATTTTAATATATTTATTATC+AGG | + | chr5_4:16034714-16034733 | Msa0840330:intron | 5.0% |
| !!! | TTTTAATATATTTATTATCA+GGG | + | chr5_4:16034715-16034734 | Msa0840330:intron | 5.0% |
| CCAACCCCTTGATTAAGCAC+AGG | - | chr5_4:16031969-16031988 | None:intergenic | 50.0% | |
| CCTGTGCTTAATCAAGGGGT+TGG | + | chr5_4:16031966-16031985 | Msa0840330:CDS | 50.0% | |
| ! | CGGATTCTGTTGGTGAACCA+AGG | - | chr5_4:16032178-16032197 | None:intergenic | 50.0% |
| TGGTTCACCAACAGAATCCG+AGG | + | chr5_4:16032178-16032197 | Msa0840330:intron | 50.0% | |
| CCTATAGTCAGCCAAAGGGT+CGG | - | chr5_4:16032216-16032235 | None:intergenic | 50.0% | |
| !! | TACACATTTTCGGGGAGGGA+CGG | - | chr5_4:16032302-16032321 | None:intergenic | 50.0% |
| GCTTGGGAATATGGGGTTAG+TGG | + | chr5_4:16032694-16032713 | Msa0840330:CDS | 50.0% | |
| ! | ATGGGGTTAGTGGACCTTTC+TGG | + | chr5_4:16032704-16032723 | Msa0840330:CDS | 50.0% |
| ! | GGACCTTTCTGGTATGCTAG+TGG | + | chr5_4:16032715-16032734 | Msa0840330:CDS | 50.0% |
| GCTCCACTAGCATACCAGAA+AGG | - | chr5_4:16032721-16032740 | None:intergenic | 50.0% | |
| TCACACCATGGGCAATCTTG+TGG | + | chr5_4:16033828-16033847 | Msa0840330:CDS | 50.0% | |
| ! | CATAAGGGCTACTTGTTGGG+AGG | + | chr5_4:16034274-16034293 | Msa0840330:CDS | 50.0% |
| AATGAAAGTGAGGCAGGTCG+TGG | + | chr5_4:16034373-16034392 | Msa0840330:CDS | 50.0% | |
| TCAAGGCTACAGCAGTAGCT+GGG | - | chr5_4:16034408-16034427 | None:intergenic | 50.0% | |
| ATCAAGGCTACAGCAGTAGC+TGG | - | chr5_4:16034409-16034428 | None:intergenic | 50.0% | |
| ! | AGCTACTGCTGTAGCCTTGA+TGG | + | chr5_4:16034408-16034427 | Msa0840330:CDS | 50.0% |
| ! | GCTACTGCTGTAGCCTTGAT+GGG | + | chr5_4:16034409-16034428 | Msa0840330:CDS | 50.0% |
| ! | CTACTGCTGTAGCCTTGATG+GGG | + | chr5_4:16034410-16034429 | Msa0840330:CDS | 50.0% |
| !! | AGAGGTGTTGTCCTAGGGTT+TGG | + | chr5_4:16034854-16034873 | Msa0840330:CDS | 50.0% |
| CCAACTCAGAGTTACCTGCA+GGG | - | chr5_4:16035381-16035400 | None:intergenic | 50.0% | |
| TCCAACTCAGAGTTACCTGC+AGG | - | chr5_4:16035382-16035401 | None:intergenic | 50.0% | |
| !! | CATCTGAACTGATTTGGGGG+TGG | - | chr5_4:16035535-16035554 | None:intergenic | 50.0% |
| ! | ATGAAGGGGGCACATGAATG+TGG | - | chr5_4:16035702-16035721 | None:intergenic | 50.0% |
| ! | CTACTACGAGGGATTTTGGG+AGG | - | chr5_4:16035932-16035951 | None:intergenic | 50.0% |
| ATCACAGGGGAGTTCAGCAA+AGG | + | chr5_4:16036116-16036135 | Msa0840330:intron | 50.0% | |
| TCACAGGGGAGTTCAGCAAA+GGG | + | chr5_4:16036117-16036136 | Msa0840330:intron | 50.0% | |
| GGGCTGTGATTGCTATAGGA+TGG | + | chr5_4:16036153-16036172 | Msa0840330:CDS | 50.0% | |
| TGACAGACTCGTGGAAAAGG+TGG | + | chr5_4:16036265-16036284 | Msa0840330:CDS | 50.0% | |
| GTCGGAACCGTGAGATACCT+CGG | - | chr5_4:16032198-16032217 | None:intergenic | 55.0% | |
| ATCTCACGGTTCCGACCCTT+TGG | + | chr5_4:16032202-16032221 | Msa0840330:intron | 55.0% | |
| CCGACCCTTTGGCTGACTAT+AGG | + | chr5_4:16032213-16032232 | Msa0840330:intron | 55.0% | |
| TGAACCATTCCGAGGTGTGG+CGG | - | chr5_4:16032475-16032494 | None:intergenic | 55.0% | |
| TGCTAGTGGAGCTACCATCC+AGG | + | chr5_4:16032729-16032748 | Msa0840330:CDS | 55.0% | |
| GTGGAGCTACCATCCAGGTA+AGG | + | chr5_4:16032734-16032753 | Msa0840330:intron | 55.0% | |
| CAGGACCACAAGATTGCCCA+TGG | - | chr5_4:16033836-16033855 | None:intergenic | 55.0% | |
| ! | GGGTGAGTGCTATTGCAGCA+AGG | + | chr5_4:16034239-16034258 | Msa0840330:CDS | 55.0% |
| ! | ACTTGTTGGGAGGCTTGGTC+TGG | + | chr5_4:16034284-16034303 | Msa0840330:CDS | 55.0% |
| AAGGCTACAGCAGTAGCTGG+GGG | - | chr5_4:16034406-16034425 | None:intergenic | 55.0% | |
| CAAGGCTACAGCAGTAGCTG+GGG | - | chr5_4:16034407-16034426 | None:intergenic | 55.0% | |
| ! | GCTGTAGCCTTGATGGGGAA+AGG | + | chr5_4:16034415-16034434 | Msa0840330:CDS | 55.0% |
| ! | GTAGCCTTGATGGGGAAAGG+TGG | + | chr5_4:16034418-16034437 | Msa0840330:CDS | 55.0% |
| GGATCCACCTTTCCCCATCA+AGG | - | chr5_4:16034425-16034444 | None:intergenic | 55.0% | |
| ATCAGGGCAGTGACTTCAGC+TGG | + | chr5_4:16034731-16034750 | Msa0840330:intron | 55.0% | |
| CCTGCAGGGAGGGAAAGAAT+AGG | - | chr5_4:16035367-16035386 | None:intergenic | 55.0% | |
| CCTATTCTTTCCCTCCCTGC+AGG | + | chr5_4:16035364-16035383 | Msa0840330:CDS | 55.0% | |
| CTCAGAGTTACCTGCAGGGA+GGG | - | chr5_4:16035377-16035396 | None:intergenic | 55.0% | |
| ACTCAGAGTTACCTGCAGGG+AGG | - | chr5_4:16035378-16035397 | None:intergenic | 55.0% | |
| CCCTGCAGGTAACTCTGAGT+TGG | + | chr5_4:16035378-16035397 | Msa0840330:intron | 55.0% | |
| GAACCATTCCGAGGTGTGGC+GGG | - | chr5_4:16032474-16032493 | None:intergenic | 60.0% | |
| GTGCTGAAGTCCCCCAACTG+CGG | - | chr5_4:16033176-16033195 | None:intergenic | 60.0% | |
| ! | GGGCTACTTGTTGGGAGGCT+TGG | + | chr5_4:16034279-16034298 | Msa0840330:CDS | 60.0% |
| TGTTGGGTCCCGCCACACCT+CGG | + | chr5_4:16032463-16032482 | Msa0840330:CDS | 65.0% | |
| GGTCCCGCCACACCTCGGAA+TGG | + | chr5_4:16032468-16032487 | Msa0840330:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 16031776 | 16036462 | 16031776 | ID=Msa0840330;Name=Msa0840330 |
| chr5_4 | mRNA | 16031776 | 16036462 | 16031776 | ID=Msa0840330-mRNA-1;Parent=Msa0840330;Name=Msa0840330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=88|1|1|1|1|1|9|59|706 |
| chr5_4 | exon | 16031776 | 16032043 | 16031776 | ID=Msa0840330-mRNA-1:exon:6836;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16032443 | 16032550 | 16032443 | ID=Msa0840330-mRNA-1:exon:6837;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16032655 | 16032750 | 16032655 | ID=Msa0840330-mRNA-1:exon:6838;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16032870 | 16032952 | 16032870 | ID=Msa0840330-mRNA-1:exon:6839;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16033179 | 16033399 | 16033179 | ID=Msa0840330-mRNA-1:exon:6840;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16033700 | 16033962 | 16033700 | ID=Msa0840330-mRNA-1:exon:6841;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16034232 | 16034470 | 16034232 | ID=Msa0840330-mRNA-1:exon:6842;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16034736 | 16035385 | 16034736 | ID=Msa0840330-mRNA-1:exon:6843;Parent=Msa0840330-mRNA-1 |
| chr5_4 | exon | 16036123 | 16036462 | 16036123 | ID=Msa0840330-mRNA-1:exon:6844;Parent=Msa0840330-mRNA-1 |
| chr5_4 | five_prime_UTR | 16031776 | 16031863 | 16031776 | ID=Msa0840330-mRNA-1:five_prime_utr;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16031864 | 16032043 | 16031864 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16032443 | 16032550 | 16032443 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16032655 | 16032750 | 16032655 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16032870 | 16032952 | 16032870 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16033179 | 16033399 | 16033179 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16033700 | 16033962 | 16033700 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16034232 | 16034470 | 16034232 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16034736 | 16035385 | 16034736 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | CDS | 16036123 | 16036403 | 16036123 | ID=Msa0840330-mRNA-1:cds;Parent=Msa0840330-mRNA-1 |
| chr5_4 | three_prime_UTR | 16036404 | 16036462 | 16036404 | ID=Msa0840330-mRNA-1:three_prime_utr;Parent=Msa0840330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
