Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009110 | XP_013447613.1 | 90.580 | 276 | 21 | 2 | 1 | 275 | 1 | 272 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009110 | I3RZN1 | 90.580 | 276 | 21 | 2 | 1 | 275 | 1 | 272 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0760440 | Msa1009110 | 0.819523 | 1.110898e-52 | -8.615850e-47 |
| Msa0840330 | Msa1009110 | 0.824307 | 8.664150e-54 | -8.615850e-47 |
| Msa0466010 | Msa1009110 | 0.822864 | 1.885133e-53 | -8.615850e-47 |
| Msa0982780 | Msa1009110 | 0.828082 | 1.095538e-54 | -8.615850e-47 |
| Msa1009110 | Msa1050400 | 0.843585 | 1.280386e-58 | -8.615850e-47 |
| Msa1009110 | Msa1138550 | 0.888868 | 4.029195e-73 | -8.615850e-47 |
| Msa1009110 | Msa1238330 | 0.812241 | 4.682071e-51 | -8.615850e-47 |
| Msa1009110 | Msa1446900 | 0.990430 | 1.352943e-182 | -8.615850e-47 |
| Msa1009110 | Msa1458510 | 0.811531 | 6.683041e-51 | -8.615850e-47 |
| Msa0490380 | Msa1009110 | 0.818578 | 1.821657e-52 | -8.615850e-47 |
| Msa0574570 | Msa1009110 | 0.810831 | 9.480674e-51 | -8.615850e-47 |
| Msa0936530 | Msa1009110 | 0.841538 | 4.470797e-58 | -8.615850e-47 |
| Msa0936550 | Msa1009110 | 0.837196 | 5.993168e-57 | -8.615850e-47 |
| Msa0973520 | Msa1009110 | 0.825636 | 4.207254e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009110 | MtrunA17_Chr7g0219531 | 78.339 | 277 | 46 | 5 | 1 | 275 | 1 | 265 | 5.10e-154 | 430 |
| Msa1009110 | MtrunA17_Chr7g0219541 | 74.820 | 278 | 60 | 4 | 1 | 275 | 1 | 271 | 2.02e-148 | 416 |
| Msa1009110 | MtrunA17_Chr7g0219521 | 88.636 | 220 | 20 | 2 | 1 | 219 | 1 | 216 | 5.50e-141 | 395 |
| Msa1009110 | MtrunA17_Chr7g0219551 | 60.000 | 260 | 96 | 2 | 10 | 268 | 52 | 304 | 4.48e-113 | 328 |
| Msa1009110 | MtrunA17_Chr2g0308461 | 50.885 | 226 | 101 | 2 | 46 | 268 | 281 | 499 | 8.71e-75 | 237 |
| Msa1009110 | MtrunA17_Chr7g0265701 | 40.244 | 246 | 137 | 4 | 24 | 268 | 15 | 251 | 1.96e-58 | 187 |
| Msa1009110 | MtrunA17_Chr7g0265691 | 42.035 | 226 | 121 | 4 | 46 | 269 | 42 | 259 | 2.08e-58 | 187 |
| Msa1009110 | MtrunA17_Chr7g0265581 | 39.674 | 184 | 104 | 3 | 85 | 266 | 31 | 209 | 9.07e-46 | 153 |
| Msa1009110 | MtrunA17_Chr7g0219511 | 96.491 | 57 | 2 | 0 | 219 | 275 | 14 | 70 | 7.57e-35 | 120 |
| Msa1009110 | MtrunA17_Chr7g0255231 | 44.262 | 122 | 59 | 4 | 85 | 204 | 112 | 226 | 5.94e-26 | 102 |
| Msa1009110 | MtrunA17_Chr7g0265681 | 48.980 | 49 | 25 | 0 | 88 | 136 | 25 | 73 | 2.98e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009110 | AT3G29760.5 | 53.266 | 199 | 86 | 1 | 67 | 265 | 325 | 516 | 4.82e-78 | 246 |
| Msa1009110 | AT3G29760.3 | 53.266 | 199 | 86 | 1 | 67 | 265 | 325 | 516 | 4.82e-78 | 246 |
| Msa1009110 | AT3G29760.2 | 47.111 | 225 | 86 | 2 | 67 | 265 | 325 | 542 | 5.03e-72 | 231 |
| Msa1009110 | AT4G26190.2 | 47.945 | 219 | 106 | 2 | 47 | 265 | 843 | 1053 | 1.40e-63 | 215 |
| Msa1009110 | AT4G26190.5 | 47.945 | 219 | 106 | 2 | 47 | 265 | 843 | 1053 | 1.40e-63 | 215 |
| Msa1009110 | AT4G26190.3 | 47.945 | 219 | 106 | 2 | 47 | 265 | 843 | 1053 | 1.40e-63 | 215 |
| Msa1009110 | AT4G26190.1 | 47.945 | 219 | 106 | 2 | 47 | 265 | 843 | 1053 | 1.40e-63 | 215 |
| Msa1009110 | AT4G26190.4 | 47.945 | 219 | 106 | 2 | 47 | 265 | 843 | 1053 | 1.40e-63 | 215 |
| Msa1009110 | AT3G29760.1 | 52.817 | 142 | 58 | 2 | 67 | 208 | 325 | 457 | 5.14e-48 | 166 |
| Msa1009110 | AT2G36540.1 | 39.706 | 204 | 97 | 6 | 66 | 269 | 72 | 249 | 4.11e-40 | 140 |
| Msa1009110 | AT2G36550.1 | 37.671 | 146 | 79 | 3 | 124 | 269 | 8 | 141 | 9.28e-27 | 102 |
| Msa1009110 | AT3G29760.4 | 48.571 | 70 | 29 | 1 | 67 | 136 | 325 | 387 | 2.93e-16 | 78.6 |
Find 52 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTATTCTTGATTTAAA+TGG | 0.148881 | 7_1:-9990993 | Msa1009110:CDS |
| GATATAAACATTACTCAAAA+AGG | 0.177621 | 7_1:+9986247 | None:intergenic |
| TTAAGGATTTAAGGAAAATT+TGG | 0.214094 | 7_1:-9987309 | Msa1009110:CDS |
| GGTCTCCTGAATAATGAAAA+AGG | 0.309208 | 7_1:+9990463 | None:intergenic |
| TAAGGATTTAAGGAAAATTT+GGG | 0.311259 | 7_1:-9987308 | Msa1009110:CDS |
| GCATCTGGTGTGACCTCCTT+TGG | 0.321436 | 7_1:+9990942 | None:intergenic |
| TTCAGAAATTCATGAGAAAA+AGG | 0.337712 | 7_1:+9990442 | None:intergenic |
| CACTGAAACAAATGAATCTT+GGG | 0.372355 | 7_1:-9986347 | Msa1009110:CDS |
| TTGCCAGTCCTTCTAGATAT+TGG | 0.381824 | 7_1:+9986425 | None:intergenic |
| TCACTGAAACAAATGAATCT+TGG | 0.393898 | 7_1:-9986348 | Msa1009110:CDS |
| CCCTTCTCCCAAGGAAGATT+AGG | 0.399945 | 7_1:+9987274 | None:intergenic |
| CTTACATGATCTCCTGCCTA+TGG | 0.409797 | 7_1:+9990917 | None:intergenic |
| CAGTATCATTGATTATTTGA+TGG | 0.411423 | 7_1:-9990261 | Msa1009110:CDS |
| ACTGGCAAGTGCTGAAAATA+TGG | 0.413196 | 7_1:-9986410 | Msa1009110:CDS |
| CTCCTGCCTATGGTTGCATC+TGG | 0.436291 | 7_1:+9990927 | None:intergenic |
| TCATCAAAAGAAATACCAAT+TGG | 0.440823 | 7_1:-9991032 | Msa1009110:CDS |
| AGTATGATCCTAATCTTCCT+TGG | 0.454156 | 7_1:-9987282 | Msa1009110:CDS |
| GTGATCCGTTCTTGACCAAA+TGG | 0.457924 | 7_1:+9986367 | None:intergenic |
| TTCTTCCTCAAACATCCAAT+TGG | 0.463837 | 7_1:+9991017 | None:intergenic |
| AGTATCATTGATTATTTGAT+GGG | 0.464535 | 7_1:-9990260 | Msa1009110:CDS |
| AAATACCAATTGGATGTTTG+AGG | 0.466266 | 7_1:-9991022 | Msa1009110:CDS |
| AGGATTAAGCAGTGCCTTGT+GGG | 0.466605 | 7_1:+9987210 | None:intergenic |
| TTCTCATAACTGAATGTATG+AGG | 0.469336 | 7_1:+9987072 | None:intergenic |
| GATCTACGCCAATATCTAGA+AGG | 0.480220 | 7_1:-9986433 | Msa1009110:CDS |
| TATGTAGAGCAACATCCATT+TGG | 0.482270 | 7_1:-9986382 | Msa1009110:CDS |
| CCTAATCTTCCTTGGGAGAA+GGG | 0.497837 | 7_1:-9987274 | Msa1009110:CDS |
| AAAAGAAAGAAAATGGTTGT+TGG | 0.501345 | 7_1:-9991149 | None:intergenic |
| GTATGATCCTAATCTTCCTT+GGG | 0.504972 | 7_1:-9987281 | Msa1009110:CDS |
| ACTACACAGTTGTTCAACTT+AGG | 0.508269 | 7_1:+9986124 | None:intergenic |
| AATGGTTGTTGGTGTAGTAA+AGG | 0.525142 | 7_1:-9991138 | Msa1009110:CDS |
| TATTGTTTCTTCACATCCAA+AGG | 0.529429 | 7_1:-9990958 | Msa1009110:CDS |
| ACAAGGGCTTAAGAAATTTG+CGG | 0.531610 | 7_1:-9986208 | Msa1009110:three_prime_UTR |
| TCCTAATCTTCCTTGGGAGA+AGG | 0.534225 | 7_1:-9987275 | Msa1009110:CDS |
| GTGTTAGCGCAGTATAAGAT+TGG | 0.536173 | 7_1:-9986103 | Msa1009110:three_prime_UTR |
| CACCAGATGCAACCATAGGC+AGG | 0.543471 | 7_1:-9990929 | Msa1009110:CDS |
| AAACACTATTTATAACATTG+AGG | 0.554361 | 7_1:+9986317 | None:intergenic |
| TGAGTCAAACACTTTGCTGT+TGG | 0.555205 | 7_1:-9987242 | Msa1009110:CDS |
| TTGCTTTGAGAGATTTGAAG+TGG | 0.560768 | 7_1:-9990416 | Msa1009110:CDS |
| AATCAGAGTGACAATTCTCT+AGG | 0.564562 | 7_1:-9987051 | Msa1009110:intron |
| CAGGATTAAGCAGTGCCTTG+TGG | 0.568364 | 7_1:+9987209 | None:intergenic |
| AACATCCATTTGGTCAAGAA+CGG | 0.582203 | 7_1:-9986372 | Msa1009110:CDS |
| TTGTAATATCCCTTCTCCCA+AGG | 0.590247 | 7_1:+9987265 | None:intergenic |
| ACGCCAATATCTAGAAGGAC+TGG | 0.596511 | 7_1:-9986428 | Msa1009110:CDS |
| TGAGGAAAGATTGAGTTGAA+TGG | 0.599638 | 7_1:+9987090 | None:intergenic |
| ATATTGGCGTAGATCGCCTC+CGG | 0.616561 | 7_1:+9986441 | None:intergenic |
| TGTTTCTTCACATCCAAAGG+AGG | 0.627350 | 7_1:-9990955 | Msa1009110:CDS |
| CAACCTGAAAAGTGAAAACA+TGG | 0.631911 | 7_1:-9986286 | Msa1009110:exon |
| TGGCTGTGTGGTCTTCACGT+TGG | 0.645442 | 7_1:-9990396 | Msa1009110:CDS |
| GTTGGATGATTCTCCCCACA+AGG | 0.654823 | 7_1:-9987224 | Msa1009110:CDS |
| AGAGATTTGAAGTGGCTGTG+TGG | 0.661167 | 7_1:-9990408 | Msa1009110:CDS |
| GGATTAAGCAGTGCCTTGTG+GGG | 0.670885 | 7_1:+9987211 | None:intergenic |
| GTCACACCAGATGCAACCAT+AGG | 0.682655 | 7_1:-9990933 | Msa1009110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | - | chr7_1:9988826-9988845 | Msa1009110:intron | 0.0% |
| !!! | AATTTTCTTTAAATTATTGT+CGG | + | chr7_1:9986524-9986543 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr7_1:9988104-9988123 | None:intergenic | 10.0% |
| !! | TTAACACAATAAATAAAAAA+TGG | + | chr7_1:9989794-9989813 | None:intergenic | 10.0% |
| !! | CTTATTATTCTTGATTTAAA+TGG | - | chr7_1:9986236-9986255 | Msa1009110:three_prime_UTR | 15.0% |
| !!! | TTTTTTGTTGACTTTTTTAA+TGG | - | chr7_1:9986358-9986377 | Msa1009110:CDS | 15.0% |
| !!! | ATTAAGCATTATTTTTGTTT+TGG | + | chr7_1:9987322-9987341 | None:intergenic | 15.0% |
| !!! | ATTTATGTTTAAGTATTTTG+TGG | + | chr7_1:9987396-9987415 | None:intergenic | 15.0% |
| !! | AATAAACTTATAACAAACAT+TGG | + | chr7_1:9989494-9989513 | None:intergenic | 15.0% |
| !!! | AGTTTATTAAATTTTATTCC+TGG | - | chr7_1:9989506-9989525 | Msa1009110:intron | 15.0% |
| !!! | GTTTATTAAATTTTATTCCT+GGG | - | chr7_1:9989507-9989526 | Msa1009110:intron | 15.0% |
| !! | AAAAATATTCTCATAGAAAA+TGG | - | chr7_1:9989551-9989570 | Msa1009110:intron | 15.0% |
| !! | TAATTTATTCTCATATTCAT+GGG | + | chr7_1:9989591-9989610 | None:intergenic | 15.0% |
| !! | TTATTTATTGTGTTAAACAT+TGG | - | chr7_1:9989798-9989817 | Msa1009110:intron | 15.0% |
| !! | ATAAATGAAGAAAAATACAA+AGG | + | chr7_1:9990063-9990082 | None:intergenic | 15.0% |
| !! | ATATAAACATTACTCAAAAA+GGG | + | chr7_1:9990984-9991003 | None:intergenic | 15.0% |
| !! | AAAAATATAACCACAATTGT+TGG | - | chr7_1:9986584-9986603 | Msa1009110:intron | 20.0% |
| !! | TAAGAAAATGCATTAATTCA+TGG | + | chr7_1:9986716-9986735 | None:intergenic | 20.0% |
| !!! | ACTCGTGTTTTATAATTTTT+AGG | - | chr7_1:9986934-9986953 | Msa1009110:intron | 20.0% |
| !!! | CTCGTGTTTTATAATTTTTA+GGG | - | chr7_1:9986935-9986954 | Msa1009110:intron | 20.0% |
| !!! | AGTATCATTGATTATTTGAT+GGG | - | chr7_1:9986969-9986988 | Msa1009110:intron | 20.0% |
| !!! | TAGTAGGATTTTGTTTATTT+TGG | - | chr7_1:9987626-9987645 | Msa1009110:intron | 20.0% |
| !!! | TTTTTGAAATTTTTCCGTAT+CGG | + | chr7_1:9988011-9988030 | None:intergenic | 20.0% |
| !!! | AAACCCTAATTTTTTAGAAA+GGG | - | chr7_1:9988602-9988621 | Msa1009110:intron | 20.0% |
| !! | ACATTTCATTTATCTTTCTT+TGG | + | chr7_1:9988672-9988691 | None:intergenic | 20.0% |
| !! | AAGACATATCTCAATATTAT+CGG | - | chr7_1:9989274-9989293 | Msa1009110:intron | 20.0% |
| !! | AAAATCTGATAATCAACATA+CGG | - | chr7_1:9989382-9989401 | Msa1009110:intron | 20.0% |
| !!! | TGAGAATATTTTTTTTTCCT+AGG | + | chr7_1:9989544-9989563 | None:intergenic | 20.0% |
| !! | CTAATTTATTCTCATATTCA+TGG | + | chr7_1:9989592-9989611 | None:intergenic | 20.0% |
| !! | ATTATAATAGGAAGGTTAAT+GGG | + | chr7_1:9989625-9989644 | None:intergenic | 20.0% |
| !! | TATTATAATAGGAAGGTTAA+TGG | + | chr7_1:9989626-9989645 | None:intergenic | 20.0% |
| !! | ATTCCTGAAACTATTATAAT+AGG | + | chr7_1:9989637-9989656 | None:intergenic | 20.0% |
| !! | CTTAAATCCTTAAAAACTAT+TGG | + | chr7_1:9989913-9989932 | None:intergenic | 20.0% |
| !!! | CAATAGTTTTTAAGGATTTA+AGG | - | chr7_1:9989911-9989930 | Msa1009110:intron | 20.0% |
| !! | TTAAGGATTTAAGGAAAATT+TGG | - | chr7_1:9989920-9989939 | Msa1009110:intron | 20.0% |
| !! | TAAGGATTTAAGGAAAATTT+GGG | - | chr7_1:9989921-9989940 | Msa1009110:intron | 20.0% |
| !! | TTCTTATATGTAAAGTCATA+AGG | - | chr7_1:9990218-9990237 | Msa1009110:intron | 20.0% |
| !!! | ATTACTAACTTGTTAACATT+TGG | + | chr7_1:9990681-9990700 | None:intergenic | 20.0% |
| !! | AAACACTATTTATAACATTG+AGG | + | chr7_1:9990915-9990934 | None:intergenic | 20.0% |
| !! | TATAAACATTACTCAAAAAG+GGG | + | chr7_1:9990983-9991002 | None:intergenic | 20.0% |
| !! | GATATAAACATTACTCAAAA+AGG | + | chr7_1:9990985-9991004 | None:intergenic | 20.0% |
| !!! | GAGTAATGTTTATATCTTTT+TGG | - | chr7_1:9990989-9991008 | Msa1009110:CDS | 20.0% |
| ! | TCATCAAAAGAAATACCAAT+TGG | - | chr7_1:9986197-9986216 | Msa1009110:three_prime_UTR | 25.0% |
| ! | AAAACGCTTAACTAAATGAT+TGG | + | chr7_1:9986457-9986476 | None:intergenic | 25.0% |
| !! | TAAATTATTGTCGGTATTGA+TGG | + | chr7_1:9986515-9986534 | None:intergenic | 25.0% |
| !! | AATCAGTAATCACAAGTTTT+TGG | - | chr7_1:9986558-9986577 | Msa1009110:intron | 25.0% |
| !! | ATCAGTAATCACAAGTTTTT+GGG | - | chr7_1:9986559-9986578 | Msa1009110:intron | 25.0% |
| !!! | ACACCTTTAATTTGAAATGT+TGG | - | chr7_1:9986627-9986646 | Msa1009110:intron | 25.0% |
| ! | ATGGATTCAAATCATATACA+CGG | + | chr7_1:9986697-9986716 | None:intergenic | 25.0% |
| !!! | TTTATTTTTCAGTGTTCAAG+AGG | - | chr7_1:9986743-9986762 | Msa1009110:intron | 25.0% |
| ! | TTCAGAAATTCATGAGAAAA+AGG | + | chr7_1:9986790-9986809 | None:intergenic | 25.0% |
| !! | CAGTATCATTGATTATTTGA+TGG | - | chr7_1:9986968-9986987 | Msa1009110:intron | 25.0% |
| !!! | AACAAATGTTGATTTTCACT+TGG | - | chr7_1:9987000-9987019 | Msa1009110:intron | 25.0% |
| !!! | ACAAATGTTGATTTTCACTT+GGG | - | chr7_1:9987001-9987020 | Msa1009110:intron | 25.0% |
| !! | TCAAAATTGGGATTTTTCTT+CGG | - | chr7_1:9987158-9987177 | Msa1009110:intron | 25.0% |
| ! | AAAATGACAATCAAAATCGA+AGG | - | chr7_1:9987212-9987231 | Msa1009110:CDS | 25.0% |
| !! | TATGTTTAAGTATTTTGTGG+AGG | + | chr7_1:9987393-9987412 | None:intergenic | 25.0% |
| !!! | TACATGATTTTGAAAGATTC+TGG | + | chr7_1:9987562-9987581 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr7_1:9988024-9988043 | Msa1009110:intron | 25.0% |
| ! | ATTAACAAACACAAAAAACC+AGG | - | chr7_1:9988124-9988143 | Msa1009110:intron | 25.0% |
| ! | AATTCTACACTATATCCAAA+AGG | - | chr7_1:9988257-9988276 | Msa1009110:intron | 25.0% |
| !! | GATTTGTATATCTTGATGAT+GGG | + | chr7_1:9988384-9988403 | None:intergenic | 25.0% |
| !! | TGATTTGTATATCTTGATGA+TGG | + | chr7_1:9988385-9988404 | None:intergenic | 25.0% |
| ! | AAAGAAGATGGATATAAGAA+AGG | + | chr7_1:9988509-9988528 | None:intergenic | 25.0% |
| !!! | GAAACCCTAATTTTTTAGAA+AGG | - | chr7_1:9988601-9988620 | Msa1009110:intron | 25.0% |
| !!! | AACCCTAATTTTTTAGAAAG+GGG | - | chr7_1:9988603-9988622 | Msa1009110:intron | 25.0% |
| !! | TTCCCCTTTCTAAAAAATTA+GGG | + | chr7_1:9988608-9988627 | None:intergenic | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | - | chr7_1:9988837-9988856 | Msa1009110:intron | 25.0% |
| !! | TTAGAAAAGGTATACTCAAA+GGG | + | chr7_1:9988993-9989012 | None:intergenic | 25.0% |
| !! | TTTGAGTATACCTTTTCTAA+CGG | - | chr7_1:9988993-9989012 | Msa1009110:intron | 25.0% |
| ! | GTTATATCTGTATATTTCCA+TGG | - | chr7_1:9989445-9989464 | Msa1009110:intron | 25.0% |
| !! | TACTTCTATCATTTTATCCA+TGG | + | chr7_1:9989465-9989484 | None:intergenic | 25.0% |
| ! | AATATTCTCATAGAAAATGG+TGG | - | chr7_1:9989554-9989573 | Msa1009110:intron | 25.0% |
| ! | ATATTCTCATAGAAAATGGT+GGG | - | chr7_1:9989555-9989574 | Msa1009110:intron | 25.0% |
| ! | CTGAAACTATTATAATAGGA+AGG | + | chr7_1:9989633-9989652 | None:intergenic | 25.0% |
| ! | CTTCCTATTATAATAGTTTC+AGG | - | chr7_1:9989631-9989650 | Msa1009110:intron | 25.0% |
| !!! | TTCCTATGAATGTTATTTCT+GGG | + | chr7_1:9989681-9989700 | None:intergenic | 25.0% |
| !!! | ATTCCTATGAATGTTATTTC+TGG | + | chr7_1:9989682-9989701 | None:intergenic | 25.0% |
| ! | TGAAGAAAAATACAAAGGAA+GGG | + | chr7_1:9990058-9990077 | None:intergenic | 25.0% |
| ! | ATGAAGAAAAATACAAAGGA+AGG | + | chr7_1:9990059-9990078 | None:intergenic | 25.0% |
| ! | CAAAACATTAAGCATAAGTT+AGG | + | chr7_1:9990110-9990129 | None:intergenic | 25.0% |
| ! | TTATTCAAATCAATCCAAAC+AGG | + | chr7_1:9990303-9990322 | None:intergenic | 25.0% |
| !! | CATTGTCTTTTCTTGTTAAA+GGG | - | chr7_1:9990602-9990621 | Msa1009110:intron | 25.0% |
| !!! | TAGTAATTACGTTAGTTTTC+AGG | - | chr7_1:9990694-9990713 | Msa1009110:intron | 25.0% |
| !!! | AGTAATTACGTTAGTTTTCA+GGG | - | chr7_1:9990695-9990714 | Msa1009110:intron | 25.0% |
| !! | TCATCTTTTTCATCACTAAC+TGG | + | chr7_1:9986155-9986174 | None:intergenic | 30.0% |
| TAGTGATGAAAAAGATGAAG+AGG | - | chr7_1:9986157-9986176 | Msa1009110:three_prime_UTR | 30.0% | |
| AAATACCAATTGGATGTTTG+AGG | - | chr7_1:9986207-9986226 | Msa1009110:three_prime_UTR | 30.0% | |
| ! | TATTGTTTCTTCACATCCAA+AGG | - | chr7_1:9986271-9986290 | Msa1009110:three_prime_UTR | 30.0% |
| GCACCAACATTTCAAATTAA+AGG | + | chr7_1:9986633-9986652 | None:intergenic | 30.0% | |
| ! | TTTTCAAATAGATTGTCCTC+TGG | - | chr7_1:9987080-9987099 | Msa1009110:CDS | 30.0% |
| !!! | AGAATCTGTTTTGGTAGATT+TGG | - | chr7_1:9987103-9987122 | Msa1009110:intron | 30.0% |
| ! | CAAAATTGGGATTTTTCTTC+GGG | - | chr7_1:9987159-9987178 | Msa1009110:intron | 30.0% |
| !! | TATACATGTCAATTTTGACC+CGG | + | chr7_1:9987530-9987549 | None:intergenic | 30.0% |
| ! | TAAAATCTTGCGATTTTGCA+TGG | - | chr7_1:9987580-9987599 | Msa1009110:intron | 30.0% |
| !! | GATTTTGATGCGATTTTAGT+AGG | - | chr7_1:9987610-9987629 | Msa1009110:intron | 30.0% |
| CAATGAATTTGAATCGTTGA+AGG | - | chr7_1:9987656-9987675 | Msa1009110:intron | 30.0% | |
| ! | AGTCGCAAAATCTTGAATTT+TGG | - | chr7_1:9987686-9987705 | Msa1009110:intron | 30.0% |
| ! | GTCGCAAAATCTTGAATTTT+GGG | - | chr7_1:9987687-9987706 | Msa1009110:intron | 30.0% |
| !!! | TGAATTTTGGGATTTAAGTC+AGG | - | chr7_1:9987699-9987718 | Msa1009110:intron | 30.0% |
| TGTTACAATCTTGTGAGATT+TGG | - | chr7_1:9987773-9987792 | Msa1009110:intron | 30.0% | |
| AATATTGACGATTAAGAGAG+TGG | - | chr7_1:9988175-9988194 | Msa1009110:intron | 30.0% | |
| ! | AACACTAATGATGCTCTTTT+TGG | + | chr7_1:9988230-9988249 | None:intergenic | 30.0% |
| TTAAGTTACAGAGTTGTCTT+TGG | + | chr7_1:9988427-9988446 | None:intergenic | 30.0% | |
| TTAATTCCAACATCATCAAG+CGG | - | chr7_1:9988443-9988462 | Msa1009110:intron | 30.0% | |
| TTCTTTCCTTGACAAGAAAA+TGG | - | chr7_1:9988523-9988542 | Msa1009110:intron | 30.0% | |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr7_1:9988584-9988603 | None:intergenic | 30.0% |
| ! | CTTCCCCTTTCTAAAAAATT+AGG | + | chr7_1:9988609-9988628 | None:intergenic | 30.0% |
| ! | GTTAGAAAAGGTATACTCAA+AGG | + | chr7_1:9988994-9989013 | None:intergenic | 30.0% |
| ! | CTTCATTGAAGAACAAGTTT+TGG | - | chr7_1:9989019-9989038 | Msa1009110:intron | 30.0% |
| !!! | CAGCTTTTAGAGTGTATTAA+AGG | + | chr7_1:9989045-9989064 | None:intergenic | 30.0% |
| !! | CACTCTAAAAGCTGAAATTT+TGG | - | chr7_1:9989051-9989070 | Msa1009110:intron | 30.0% |
| TGAAATCACATGTTGAAAGT+CGG | + | chr7_1:9989255-9989274 | None:intergenic | 30.0% | |
| TTCCCAGAAATAACATTCAT+AGG | - | chr7_1:9989676-9989695 | Msa1009110:intron | 30.0% | |
| TATGCAGTCAACATTTCTTA+AGG | + | chr7_1:9989732-9989751 | None:intergenic | 30.0% | |
| CATGCTAATTCTTTATGGAT+TGG | - | chr7_1:9989763-9989782 | Msa1009110:intron | 30.0% | |
| TATCCTGTCAAAGAATATGT+AGG | + | chr7_1:9989840-9989859 | None:intergenic | 30.0% | |
| TTCTCATAACTGAATGTATG+AGG | + | chr7_1:9990160-9990179 | None:intergenic | 30.0% | |
| GCATTAACATCAGCATAATA+TGG | - | chr7_1:9990277-9990296 | Msa1009110:intron | 30.0% | |
| TAAGCACTTATGAGATTGTT+TGG | - | chr7_1:9990339-9990358 | Msa1009110:intron | 30.0% | |
| AAGCACTTATGAGATTGTTT+GGG | - | chr7_1:9990340-9990359 | Msa1009110:intron | 30.0% | |
| GAAAAGTGAAAGTTGCTAAT+GGG | + | chr7_1:9990386-9990405 | None:intergenic | 30.0% | |
| TGAAAAGTGAAAGTTGCTAA+TGG | + | chr7_1:9990387-9990406 | None:intergenic | 30.0% | |
| ! | GCATTGTCTTTTCTTGTTAA+AGG | - | chr7_1:9990601-9990620 | Msa1009110:intron | 30.0% |
| AACGCATATAAGTTCTATAC+AGG | + | chr7_1:9990737-9990756 | None:intergenic | 30.0% | |
| TCACTGAAACAAATGAATCT+TGG | - | chr7_1:9990881-9990900 | Msa1009110:intron | 30.0% | |
| CACTGAAACAAATGAATCTT+GGG | - | chr7_1:9990882-9990901 | Msa1009110:intron | 30.0% | |
| ! | TTTTTGGATTACATGCACAA+GGG | - | chr7_1:9991005-9991024 | Msa1009110:CDS | 30.0% |
| TTCTTCCTCAAACATCCAAT+TGG | + | chr7_1:9986215-9986234 | None:intergenic | 35.0% | |
| CAAAGTCACGAAATCATGAT+TGG | - | chr7_1:9986423-9986442 | Msa1009110:CDS | 35.0% | |
| TATAACCACAATTGTTGGTC+TGG | - | chr7_1:9986589-9986608 | Msa1009110:intron | 35.0% | |
| !! | TTGAAATGTTGGTGCTACAA+AGG | - | chr7_1:9986638-9986657 | Msa1009110:intron | 35.0% |
| !! | AGAGGCCTTTTTCATTATTC+AGG | - | chr7_1:9986761-9986780 | Msa1009110:intron | 35.0% |
| GGTCTCCTGAATAATGAAAA+AGG | + | chr7_1:9986769-9986788 | None:intergenic | 35.0% | |
| !! | TTGCTTTGAGAGATTTGAAG+TGG | - | chr7_1:9986813-9986832 | Msa1009110:intron | 35.0% |
| TGTGTGAGGTTGTCAAAATT+GGG | - | chr7_1:9987146-9987165 | Msa1009110:intron | 35.0% | |
| !!! | GATTTTTCTTCGGGTTGAAA+GGG | - | chr7_1:9987168-9987187 | Msa1009110:intron | 35.0% |
| !! | CATACTAAGCTTTAGCTTGA+CGG | + | chr7_1:9987858-9987877 | None:intergenic | 35.0% |
| ! | AGCACTAACAATGTTCCTTT+TGG | + | chr7_1:9988275-9988294 | None:intergenic | 35.0% |
| !! | GTATATCTTGATGATGGGAA+TGG | + | chr7_1:9988379-9988398 | None:intergenic | 35.0% |
| TACAAATCAGCTTCCAAATC+CGG | - | chr7_1:9988396-9988415 | Msa1009110:intron | 35.0% | |
| GAAAGGACAATCAAGAATGT+GGG | + | chr7_1:9988492-9988511 | None:intergenic | 35.0% | |
| AGAAAGGACAATCAAGAATG+TGG | + | chr7_1:9988493-9988512 | None:intergenic | 35.0% | |
| TTCTTGTCAAGGAAAGAAGA+TGG | + | chr7_1:9988521-9988540 | None:intergenic | 35.0% | |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr7_1:9988917-9988936 | Msa1009110:intron | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | - | chr7_1:9988918-9988937 | Msa1009110:intron | 35.0% |
| !!! | TCATCCATTTTGAAGTATCG+GGG | - | chr7_1:9988919-9988938 | Msa1009110:intron | 35.0% |
| !!! | TCAAAGGGTTGATGTCTTTT+GGG | + | chr7_1:9988978-9988997 | None:intergenic | 35.0% |
| AATGAAGAGACCGTTAGAAA+AGG | + | chr7_1:9989006-9989025 | None:intergenic | 35.0% | |
| GATTTATGTAGAGCTACACT+GGG | + | chr7_1:9989098-9989117 | None:intergenic | 35.0% | |
| AGATTTATGTAGAGCTACAC+TGG | + | chr7_1:9989099-9989118 | None:intergenic | 35.0% | |
| TGAAAGTCGGAGAAATATGA+TGG | + | chr7_1:9989242-9989261 | None:intergenic | 35.0% | |
| ! | TTTTGTGACTGCAATCGATT+TGG | + | chr7_1:9989301-9989320 | None:intergenic | 35.0% |
| CTTGAAACAAATACACCCTA+AGG | + | chr7_1:9989426-9989445 | None:intergenic | 35.0% | |
| CAGTGCATGCTAATTCTTTA+TGG | - | chr7_1:9989758-9989777 | Msa1009110:intron | 35.0% | |
| CATCCTACATATTCTTTGAC+AGG | - | chr7_1:9989834-9989853 | Msa1009110:intron | 35.0% | |
| ! | TCGCAAGCCAATAGTTTTTA+AGG | - | chr7_1:9989903-9989922 | Msa1009110:intron | 35.0% |
| AGTATGATCCTAATCTTCCT+TGG | - | chr7_1:9989947-9989966 | Msa1009110:intron | 35.0% | |
| GTATGATCCTAATCTTCCTT+GGG | - | chr7_1:9989948-9989967 | Msa1009110:intron | 35.0% | |
| GGAAGGGTAAGTTTATTTAC+AGG | + | chr7_1:9990042-9990061 | None:intergenic | 35.0% | |
| !! | TGAGGAAAGATTGAGTTGAA+TGG | + | chr7_1:9990142-9990161 | None:intergenic | 35.0% |
| AATCAGAGTGACAATTCTCT+AGG | - | chr7_1:9990178-9990197 | Msa1009110:intron | 35.0% | |
| !! | TTTATTTTCACAAGCTCTCC+AGG | - | chr7_1:9990408-9990427 | Msa1009110:CDS | 35.0% |
| CTATATGAGTTGTTTGCACA+TGG | + | chr7_1:9990438-9990457 | None:intergenic | 35.0% | |
| AGTTCTATACAGGAGTTCTA+GGG | + | chr7_1:9990727-9990746 | None:intergenic | 35.0% | |
| AAGTTCTATACAGGAGTTCT+AGG | + | chr7_1:9990728-9990747 | None:intergenic | 35.0% | |
| !!! | AATTACTTTTTGTCAGCTGC+CGG | - | chr7_1:9990769-9990788 | Msa1009110:intron | 35.0% |
| TATGTAGAGCAACATCCATT+TGG | - | chr7_1:9990847-9990866 | Msa1009110:intron | 35.0% | |
| AACATCCATTTGGTCAAGAA+CGG | - | chr7_1:9990857-9990876 | Msa1009110:intron | 35.0% | |
| CAACCTGAAAAGTGAAAACA+TGG | - | chr7_1:9990943-9990962 | Msa1009110:CDS | 35.0% | |
| !! | CAACCATGTTTTCACTTTTC+AGG | + | chr7_1:9990949-9990968 | None:intergenic | 35.0% |
| ! | CTTTTTGGATTACATGCACA+AGG | - | chr7_1:9991004-9991023 | Msa1009110:CDS | 35.0% |
| ACAAGGGCTTAAGAAATTTG+CGG | - | chr7_1:9991021-9991040 | Msa1009110:CDS | 35.0% | |
| ACTACACAGTTGTTCAACTT+AGG | + | chr7_1:9991108-9991127 | None:intergenic | 35.0% | |
| TGTTTCTTCACATCCAAAGG+AGG | - | chr7_1:9986274-9986293 | Msa1009110:three_prime_UTR | 40.0% | |
| TACCAAAACAGATTCTCCAG+AGG | + | chr7_1:9987099-9987118 | None:intergenic | 40.0% | |
| CCTCACACACGTATATACTA+AGG | + | chr7_1:9987135-9987154 | None:intergenic | 40.0% | |
| CCTTAGTATATACGTGTGTG+AGG | - | chr7_1:9987132-9987151 | Msa1009110:intron | 40.0% | |
| GTGTGTGAGGTTGTCAAAAT+TGG | - | chr7_1:9987145-9987164 | Msa1009110:intron | 40.0% | |
| !!! | GGATTTTTCTTCGGGTTGAA+AGG | - | chr7_1:9987167-9987186 | Msa1009110:intron | 40.0% |
| GTTTGTACATGTGACTCAGT+TGG | + | chr7_1:9987508-9987527 | None:intergenic | 40.0% | |
| ACTGAGTCACATGTACAAAC+CGG | - | chr7_1:9987508-9987527 | Msa1009110:intron | 40.0% | |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | + | chr7_1:9988003-9988022 | None:intergenic | 40.0% |
| AAATCAAGATACGATACGGC+TGG | - | chr7_1:9988028-9988047 | Msa1009110:intron | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | - | chr7_1:9988029-9988048 | Msa1009110:intron | 40.0% | |
| ATGTTAATGTGATACGAGCC+TGG | + | chr7_1:9988145-9988164 | None:intergenic | 40.0% | |
| CGATCCAAAAAAGAACCCAT+CGG | - | chr7_1:9988304-9988323 | Msa1009110:intron | 40.0% | |
| !! | TGTTAACTCTTAGCACCGAT+GGG | + | chr7_1:9988322-9988341 | None:intergenic | 40.0% |
| !! | TATCTTGATGATGGGAATGG+AGG | + | chr7_1:9988376-9988395 | None:intergenic | 40.0% |
| AGAGTTGTCTTTGGATGAAC+CGG | + | chr7_1:9988418-9988437 | None:intergenic | 40.0% | |
| GGAAGATGCAATTGTTTGTG+TGG | - | chr7_1:9988624-9988643 | Msa1009110:intron | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr7_1:9988629-9988648 | Msa1009110:intron | 40.0% | |
| !!! | CTCAAAGGGTTGATGTCTTT+TGG | + | chr7_1:9988979-9988998 | None:intergenic | 40.0% |
| ! | AAGCTGAAATTTTGGATCCC+AGG | - | chr7_1:9989059-9989078 | Msa1009110:intron | 40.0% |
| GACCGATGTTACAATCCTTA+GGG | - | chr7_1:9989408-9989427 | Msa1009110:intron | 40.0% | |
| CACCCTAAGGATTGTAACAT+CGG | + | chr7_1:9989413-9989432 | None:intergenic | 40.0% | |
| ! | CCTAGGAATCTTTTATTCCC+AGG | + | chr7_1:9989527-9989546 | None:intergenic | 40.0% |
| CCTGGGAATAAAAGATTCCT+AGG | - | chr7_1:9989524-9989543 | Msa1009110:intron | 40.0% | |
| TTGTAATATCCCTTCTCCCA+AGG | + | chr7_1:9989967-9989986 | None:intergenic | 40.0% | |
| ! | TGAGTCAAACACTTTGCTGT+TGG | - | chr7_1:9989987-9990006 | Msa1009110:intron | 40.0% |
| TCAGCATAATATGGCCTGTT+TGG | - | chr7_1:9990286-9990305 | Msa1009110:intron | 40.0% | |
| TGAGATTGTTTGGGAGAGTT+CGG | - | chr7_1:9990349-9990368 | Msa1009110:intron | 40.0% | |
| GATCTACGCCAATATCTAGA+AGG | - | chr7_1:9990796-9990815 | Msa1009110:intron | 40.0% | |
| TTGCCAGTCCTTCTAGATAT+TGG | + | chr7_1:9990807-9990826 | None:intergenic | 40.0% | |
| !! | ACTGGCAAGTGCTGAAAATA+TGG | - | chr7_1:9990819-9990838 | Msa1009110:intron | 40.0% |
| GTGTTAGCGCAGTATAAGAT+TGG | - | chr7_1:9991126-9991145 | Msa1009110:CDS | 40.0% | |
| CTTACATGATCTCCTGCCTA+TGG | + | chr7_1:9986315-9986334 | None:intergenic | 45.0% | |
| CAACACCAGACCAACAATTG+TGG | + | chr7_1:9986597-9986616 | None:intergenic | 45.0% | |
| ! | CACAATTGTTGGTCTGGTGT+TGG | - | chr7_1:9986595-9986614 | Msa1009110:intron | 45.0% |
| ! | AGAGATTTGAAGTGGCTGTG+TGG | - | chr7_1:9986821-9986840 | Msa1009110:intron | 45.0% |
| !! | GTCCTCTGGAGAATCTGTTT+TGG | - | chr7_1:9987094-9987113 | Msa1009110:intron | 45.0% |
| CTGAGTCACATGTACAAACC+GGG | - | chr7_1:9987509-9987528 | Msa1009110:intron | 45.0% | |
| CCGTATCGTATCTCGTATCT+GGG | + | chr7_1:9987967-9987986 | None:intergenic | 45.0% | |
| CCCAGATACGAGATACGATA+CGG | - | chr7_1:9987964-9987983 | Msa1009110:intron | 45.0% | |
| TCCGTATCGTATCTCGTATC+TGG | + | chr7_1:9987968-9987987 | None:intergenic | 45.0% | |
| !!! | AGCACCGATGGGTTCTTTTT+TGG | + | chr7_1:9988311-9988330 | None:intergenic | 45.0% |
| ! | GTGTTAACTCTTAGCACCGA+TGG | + | chr7_1:9988323-9988342 | None:intergenic | 45.0% |
| GTCTTTGGATGAACCGGATT+TGG | + | chr7_1:9988412-9988431 | None:intergenic | 45.0% | |
| !! | CATGAACCGCTTGATGATGT+TGG | + | chr7_1:9988452-9988471 | None:intergenic | 45.0% |
| AAAATGGCCGAGCAGTTCAA+CGG | - | chr7_1:9988539-9988558 | Msa1009110:intron | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | - | chr7_1:9988634-9988653 | Msa1009110:intron | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | - | chr7_1:9988635-9988654 | Msa1009110:intron | 45.0% | |
| ACACAAGTATCCGTGCGTAT+CGG | - | chr7_1:9988769-9988788 | Msa1009110:intron | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | - | chr7_1:9988848-9988867 | Msa1009110:intron | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | - | chr7_1:9988849-9988868 | Msa1009110:intron | 45.0% | |
| GATACTTCCCGATACGTATC+CGG | + | chr7_1:9988859-9988878 | None:intergenic | 45.0% | |
| ! | GGATACGTATCGGGAAGTAT+CGG | - | chr7_1:9988858-9988877 | Msa1009110:intron | 45.0% |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr7_1:9988859-9988878 | Msa1009110:intron | 45.0% |
| GAAGCCCCGATACTTCAAAA+TGG | + | chr7_1:9988926-9988945 | None:intergenic | 45.0% | |
| !!! | AGGGTTGATGTCTTTTGGGT+GGG | + | chr7_1:9988974-9988993 | None:intergenic | 45.0% |
| !!! | AAGGGTTGATGTCTTTTGGG+TGG | + | chr7_1:9988975-9988994 | None:intergenic | 45.0% |
| CGACCGATGTTACAATCCTT+AGG | - | chr7_1:9989407-9989426 | Msa1009110:intron | 45.0% | |
| TCCTAATCTTCCTTGGGAGA+AGG | - | chr7_1:9989954-9989973 | Msa1009110:intron | 45.0% | |
| CCTAATCTTCCTTGGGAGAA+GGG | - | chr7_1:9989955-9989974 | Msa1009110:intron | 45.0% | |
| AGGATTAAGCAGTGCCTTGT+GGG | + | chr7_1:9990022-9990041 | None:intergenic | 45.0% | |
| TTGTTTGCACATGGCTATCC+TGG | + | chr7_1:9990429-9990448 | None:intergenic | 45.0% | |
| AAAGCATAGCAAGTTCTGCG+AGG | + | chr7_1:9990645-9990664 | None:intergenic | 45.0% | |
| ACGCCAATATCTAGAAGGAC+TGG | - | chr7_1:9990801-9990820 | Msa1009110:intron | 45.0% | |
| GTGATCCGTTCTTGACCAAA+TGG | + | chr7_1:9990865-9990884 | None:intergenic | 45.0% | |
| GTCACACCAGATGCAACCAT+AGG | - | chr7_1:9986296-9986315 | Msa1009110:CDS | 50.0% | |
| ATCTCGTATCTGGGCTTCAC+AGG | + | chr7_1:9987958-9987977 | None:intergenic | 50.0% | |
| !! | TGATGATGGGAATGGAGGAG+AGG | + | chr7_1:9988371-9988390 | None:intergenic | 50.0% |
| !! | GCTCGGCCATTTTCTTGTCA+AGG | + | chr7_1:9988532-9988551 | None:intergenic | 50.0% |
| CACAAGTATCCGTGCGTATC+GGG | - | chr7_1:9988770-9988789 | Msa1009110:intron | 50.0% | |
| ! | CGGGATGTATCGGGAAGTAT+CGG | - | chr7_1:9988789-9988808 | Msa1009110:intron | 50.0% |
| !! | TGTCTTTTGGGTGGGACTAG+TGG | + | chr7_1:9988966-9988985 | None:intergenic | 50.0% |
| TGGGCGTAGAGGATAATCCT+GGG | + | chr7_1:9989079-9989098 | None:intergenic | 50.0% | |
| ! | GGCATTTTGTCCCATGCTCT+AGG | + | chr7_1:9989221-9989240 | None:intergenic | 50.0% |
| CCCTTCTCCCAAGGAAGATT+AGG | + | chr7_1:9989958-9989977 | None:intergenic | 50.0% | |
| GTTGGATGATTCTCCCCACA+AGG | - | chr7_1:9990005-9990024 | Msa1009110:intron | 50.0% | |
| GGATTAAGCAGTGCCTTGTG+GGG | + | chr7_1:9990021-9990040 | None:intergenic | 50.0% | |
| CAGGATTAAGCAGTGCCTTG+TGG | + | chr7_1:9990023-9990042 | None:intergenic | 50.0% | |
| !! | TACTTTTTGTCAGCTGCCGG+AGG | - | chr7_1:9990772-9990791 | Msa1009110:intron | 50.0% |
| ATATTGGCGTAGATCGCCTC+CGG | + | chr7_1:9990791-9990810 | None:intergenic | 50.0% | |
| GCATCTGGTGTGACCTCCTT+TGG | + | chr7_1:9986290-9986309 | None:intergenic | 55.0% | |
| CACCAGATGCAACCATAGGC+AGG | - | chr7_1:9986300-9986319 | Msa1009110:CDS | 55.0% | |
| CTCCTGCCTATGGTTGCATC+TGG | + | chr7_1:9986305-9986324 | None:intergenic | 55.0% | |
| TGGCTGTGTGGTCTTCACGT+TGG | - | chr7_1:9986833-9986852 | Msa1009110:intron | 55.0% | |
| ! | ACTGCACCGATACGCCGATA+CGG | - | chr7_1:9987994-9988013 | Msa1009110:intron | 55.0% |
| TTGGCCACCGTTGAACTGCT+CGG | + | chr7_1:9988549-9988568 | None:intergenic | 55.0% | |
| CAGTTCAACGGTGGCCAAAG+TGG | - | chr7_1:9988551-9988570 | Msa1009110:intron | 55.0% | |
| TCAACGGTGGCCAAAGTGGA+CGG | - | chr7_1:9988555-9988574 | Msa1009110:intron | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | + | chr7_1:9988568-9988587 | None:intergenic | 55.0% | |
| AAAGTGGACGGCGACCACTT+TGG | - | chr7_1:9988567-9988586 | Msa1009110:intron | 55.0% | |
| CCGATACATCCCGATACGCA+CGG | + | chr7_1:9988782-9988801 | None:intergenic | 55.0% | |
| CCGTGCGTATCGGGATGTAT+CGG | - | chr7_1:9988779-9988798 | Msa1009110:intron | 55.0% | |
| CGTGCGTATCGGGATGTATC+GGG | - | chr7_1:9988780-9988799 | Msa1009110:intron | 55.0% | |
| !! | GGGAAGTATCGGGCAGGTAT+CGG | - | chr7_1:9988869-9988888 | Msa1009110:intron | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr7_1:9988885-9988904 | Msa1009110:intron | 55.0% |
| TATCGGTGCAGGATACGCAG+GGG | - | chr7_1:9988886-9988905 | Msa1009110:intron | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | - | chr7_1:9988892-9988911 | Msa1009110:intron | 55.0% | |
| ! | TTGGGTGGGACTAGTGGCTT+GGG | + | chr7_1:9988960-9988979 | None:intergenic | 55.0% |
| ! | TTTGGGTGGGACTAGTGGCT+TGG | + | chr7_1:9988961-9988980 | None:intergenic | 55.0% |
| CTGGGCGTAGAGGATAATCC+TGG | + | chr7_1:9989080-9989099 | None:intergenic | 55.0% | |
| TAGAGCTACACTGGGCGTAG+AGG | + | chr7_1:9989090-9989109 | None:intergenic | 55.0% | |
| AGTCCCTACGCCTAGAGCAT+GGG | - | chr7_1:9989208-9989227 | Msa1009110:intron | 55.0% | |
| ! | TGTCCCATGCTCTAGGCGTA+GGG | + | chr7_1:9989214-9989233 | None:intergenic | 55.0% |
| ! | TTGTCCCATGCTCTAGGCGT+AGG | + | chr7_1:9989215-9989234 | None:intergenic | 55.0% |
| ATGGCCGAGCAGTTCAACGG+TGG | - | chr7_1:9988542-9988561 | Msa1009110:intron | 60.0% | |
| TGGTGTGGTGTGGGTCGTAC+TGG | - | chr7_1:9988644-9988663 | Msa1009110:intron | 60.0% | |
| !! | CGTATCGGGAAGTATCGGGC+AGG | - | chr7_1:9988863-9988882 | Msa1009110:intron | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | chr7_1:9988875-9988894 | Msa1009110:intron | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr7_1:9988884-9988903 | Msa1009110:intron | 60.0% |
| CAGTCCCTACGCCTAGAGCA+TGG | - | chr7_1:9989207-9989226 | Msa1009110:intron | 60.0% | |
| GCTCGTGTGTCTAGCGCAGC+TGG | - | chr7_1:9989137-9989156 | Msa1009110:intron | 65.0% | |
| AGGGACTGCTGCGCTAGGTG+CGG | + | chr7_1:9989195-9989214 | None:intergenic | 65.0% | |
| GGCGTAGGGACTGCTGCGCT+AGG | + | chr7_1:9989200-9989219 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9986092 | 9991159 | 9986092 | ID=Msa1009110;Name=Msa1009110 |
| chr7_1 | mRNA | 9986092 | 9991159 | 9986092 | ID=Msa1009110-mRNA-1;Parent=Msa1009110;Name=Msa1009110-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.8|0.66|1|1|1|6|202|275 |
| chr7_1 | exon | 9986092 | 9986466 | 9986092 | ID=Msa1009110-mRNA-1:exon:2806;Parent=Msa1009110-mRNA-1 |
| chr7_1 | exon | 9987052 | 9987112 | 9987052 | ID=Msa1009110-mRNA-1:exon:2805;Parent=Msa1009110-mRNA-1 |
| chr7_1 | exon | 9987210 | 9987395 | 9987210 | ID=Msa1009110-mRNA-1:exon:2804;Parent=Msa1009110-mRNA-1 |
| chr7_1 | exon | 9990229 | 9990295 | 9990229 | ID=Msa1009110-mRNA-1:exon:2803;Parent=Msa1009110-mRNA-1 |
| chr7_1 | exon | 9990394 | 9990496 | 9990394 | ID=Msa1009110-mRNA-1:exon:2802;Parent=Msa1009110-mRNA-1 |
| chr7_1 | exon | 9990922 | 9991159 | 9990922 | ID=Msa1009110-mRNA-1:exon:2801;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9990922 | 9991159 | 9990922 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9990394 | 9990496 | 9990394 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9990229 | 9990295 | 9990229 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9987210 | 9987395 | 9987210 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9987052 | 9987112 | 9987052 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | CDS | 9986294 | 9986466 | 9986294 | ID=Msa1009110-mRNA-1:cds;Parent=Msa1009110-mRNA-1 |
| chr7_1 | three_prime_UTR | 9986092 | 9986293 | 9986092 | ID=Msa1009110-mRNA-1:three_prime_utr;Parent=Msa1009110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
