Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458510 | XP_039683992.1 | 97.075 | 718 | 16 | 1 | 1 | 713 | 20 | 737 | 0.0 | 1440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458510 | sp|O65717|CNGC1_ARATH | 63.209 | 723 | 244 | 11 | 1 | 710 | 1 | 714 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458510 | A0A072U5G5 | 97.075 | 718 | 16 | 1 | 1 | 713 | 13 | 730 | 0.0 | 1439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1458510 | 0.808435 | 3.101490e-50 | -8.615850e-47 |
| Msa0003560 | Msa1458510 | 0.812017 | 5.237618e-51 | -8.615850e-47 |
| Msa0038720 | Msa1458510 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0046380 | Msa1458510 | 0.805871 | 1.082723e-49 | -8.615850e-47 |
| Msa0055740 | Msa1458510 | 0.808887 | 2.482734e-50 | -8.615850e-47 |
| Msa0058270 | Msa1458510 | 0.852393 | 4.754905e-61 | -8.615850e-47 |
| Msa0085280 | Msa1458510 | 0.813123 | 3.000774e-51 | -8.615850e-47 |
| Msa0085290 | Msa1458510 | 0.861267 | 1.156755e-63 | -8.615850e-47 |
| Msa0086590 | Msa1458510 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0092910 | Msa1458510 | 0.828562 | 8.390529e-55 | -8.615850e-47 |
| Msa0100070 | Msa1458510 | 0.811606 | 6.435548e-51 | -8.615850e-47 |
| Msa1347330 | Msa1458510 | 0.804830 | 1.789728e-49 | -8.615850e-47 |
| Msa1355890 | Msa1458510 | 0.806313 | 8.740747e-50 | -8.615850e-47 |
| Msa1378040 | Msa1458510 | 0.817283 | 3.573439e-52 | -8.615850e-47 |
| Msa1381960 | Msa1458510 | 0.821900 | 3.157068e-53 | -8.615850e-47 |
| Msa1385020 | Msa1458510 | 0.839354 | 1.666398e-57 | -8.615850e-47 |
| Msa1408180 | Msa1458510 | 0.825129 | 5.545300e-54 | -8.615850e-47 |
| Msa1408340 | Msa1458510 | 0.822444 | 2.360998e-53 | -8.615850e-47 |
| Msa1415360 | Msa1458510 | 0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa1424630 | Msa1458510 | 0.801633 | 8.212162e-49 | -8.615850e-47 |
| Msa1428070 | Msa1458510 | 0.800599 | 1.336494e-48 | -8.615850e-47 |
| Msa1430550 | Msa1458510 | 0.812636 | 3.838047e-51 | -8.615850e-47 |
| Msa1446900 | Msa1458510 | 0.814000 | 1.925372e-51 | -8.615850e-47 |
| Msa1448980 | Msa1458510 | 0.819096 | 1.389822e-52 | -8.615850e-47 |
| Msa1458510 | Msa1460800 | 0.805834 | 1.102303e-49 | -8.615850e-47 |
| Msa0607180 | Msa1458510 | 0.822914 | 1.835921e-53 | -8.615850e-47 |
| Msa0607540 | Msa1458510 | 0.802669 | 5.026658e-49 | -8.615850e-47 |
| Msa0613460 | Msa1458510 | 0.808632 | 2.814882e-50 | -8.615850e-47 |
| Msa0622170 | Msa1458510 | -0.806647 | 7.431884e-50 | -8.615850e-47 |
| Msa0647360 | Msa1458510 | 0.820342 | 7.215676e-53 | -8.615850e-47 |
| Msa0653440 | Msa1458510 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0654010 | Msa1458510 | 0.807096 | 5.971161e-50 | -8.615850e-47 |
| Msa0678220 | Msa1458510 | 0.808579 | 2.890354e-50 | -8.615850e-47 |
| Msa0679550 | Msa1458510 | 0.800401 | 1.466098e-48 | -8.615850e-47 |
| Msa0680060 | Msa1458510 | 0.820516 | 6.582053e-53 | -8.615850e-47 |
| Msa0695870 | Msa1458510 | 0.817439 | 3.295933e-52 | -8.615850e-47 |
| Msa0696790 | Msa1458510 | 0.813034 | 3.140290e-51 | -8.615850e-47 |
| Msa0713240 | Msa1458510 | 0.807064 | 6.065698e-50 | -8.615850e-47 |
| Msa0715410 | Msa1458510 | 0.820915 | 5.327988e-53 | -8.615850e-47 |
| Msa0755070 | Msa1458510 | 0.824198 | 9.189043e-54 | -8.615850e-47 |
| Msa0762850 | Msa1458510 | 0.839033 | 2.017809e-57 | -8.615850e-47 |
| Msa0772730 | Msa1458510 | 0.813607 | 2.349290e-51 | -8.615850e-47 |
| Msa0780350 | Msa1458510 | 0.809545 | 1.794310e-50 | -8.615850e-47 |
| Msa0787580 | Msa1458510 | -0.811769 | 5.931546e-51 | -8.615850e-47 |
| Msa0796960 | Msa1458510 | 0.810557 | 1.086214e-50 | -8.615850e-47 |
| Msa0801780 | Msa1458510 | 0.802288 | 6.022728e-49 | -8.615850e-47 |
| Msa0805310 | Msa1458510 | 0.821325 | 4.286899e-53 | -8.615850e-47 |
| Msa0810760 | Msa1458510 | 0.804838 | 1.782476e-49 | -8.615850e-47 |
| Msa0818110 | Msa1458510 | 0.809414 | 1.914404e-50 | -8.615850e-47 |
| Msa0825870 | Msa1458510 | 0.810722 | 1.000912e-50 | -8.615850e-47 |
| Msa0834440 | Msa1458510 | 0.817259 | 3.617874e-52 | -8.615850e-47 |
| Msa0840330 | Msa1458510 | 0.801075 | 1.068208e-48 | -8.615850e-47 |
| Msa0131420 | Msa1458510 | 0.820798 | 5.669398e-53 | -8.615850e-47 |
| Msa0141250 | Msa1458510 | 0.829426 | 5.182621e-55 | -8.615850e-47 |
| Msa0153650 | Msa1458510 | 0.807077 | 6.028444e-50 | -8.615850e-47 |
| Msa0200850 | Msa1458510 | 0.818482 | 1.915616e-52 | -8.615850e-47 |
| Msa0201530 | Msa1458510 | 0.825976 | 3.494507e-54 | -8.615850e-47 |
| Msa0229590 | Msa1458510 | 0.805116 | 1.559080e-49 | -8.615850e-47 |
| Msa0229710 | Msa1458510 | 0.813343 | 2.685010e-51 | -8.615850e-47 |
| Msa1229610 | Msa1458510 | 0.821844 | 3.253710e-53 | -8.615850e-47 |
| Msa1236420 | Msa1458510 | 0.818030 | 2.424667e-52 | -8.615850e-47 |
| Msa1236730 | Msa1458510 | 0.833271 | 5.869702e-56 | -8.615850e-47 |
| Msa1244930 | Msa1458510 | 0.808510 | 2.988868e-50 | -8.615850e-47 |
| Msa1246700 | Msa1458510 | 0.805244 | 1.465856e-49 | -8.615850e-47 |
| Msa1250310 | Msa1458510 | 0.820667 | 6.076360e-53 | -8.615850e-47 |
| Msa1252960 | Msa1458510 | 0.812551 | 4.005126e-51 | -8.615850e-47 |
| Msa1256410 | Msa1458510 | 0.829260 | 5.685424e-55 | -8.615850e-47 |
| Msa1272320 | Msa1458510 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
| Msa1297310 | Msa1458510 | 0.839652 | 1.393855e-57 | -8.615850e-47 |
| Msa1304890 | Msa1458510 | -0.810527 | 1.102590e-50 | -8.615850e-47 |
| Msa1310220 | Msa1458510 | 0.841495 | 4.590779e-58 | -8.615850e-47 |
| Msa1311340 | Msa1458510 | 0.814321 | 1.635339e-51 | -8.615850e-47 |
| Msa1317130 | Msa1458510 | 0.805755 | 1.145167e-49 | -8.615850e-47 |
| Msa0377800 | Msa1458510 | 0.820964 | 5.191457e-53 | -8.615850e-47 |
| Msa0387660 | Msa1458510 | 0.837933 | 3.879421e-57 | -8.615850e-47 |
| Msa0387690 | Msa1458510 | 0.845286 | 4.465278e-59 | -8.615850e-47 |
| Msa0402180 | Msa1458510 | 0.815945 | 7.125337e-52 | -8.615850e-47 |
| Msa0410580 | Msa1458510 | 0.840221 | 9.908108e-58 | -8.615850e-47 |
| Msa0418960 | Msa1458510 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0419670 | Msa1458510 | 0.828559 | 8.405406e-55 | -8.615850e-47 |
| Msa0431440 | Msa1458510 | 0.828599 | 8.220825e-55 | -8.615850e-47 |
| Msa0444290 | Msa1458510 | 0.813851 | 2.076519e-51 | -8.615850e-47 |
| Msa0445280 | Msa1458510 | 0.812396 | 4.329772e-51 | -8.615850e-47 |
| Msa0464710 | Msa1458510 | 0.807719 | 4.406527e-50 | -8.615850e-47 |
| Msa0466010 | Msa1458510 | 0.837068 | 6.464645e-57 | -8.615850e-47 |
| Msa0476330 | Msa1458510 | 0.847723 | 9.654181e-60 | -8.615850e-47 |
| Msa0982780 | Msa1458510 | 0.819002 | 1.459544e-52 | -8.615850e-47 |
| Msa0998460 | Msa1458510 | 0.827304 | 1.684424e-54 | -8.615850e-47 |
| Msa1007030 | Msa1458510 | 0.802937 | 4.426167e-49 | -8.615850e-47 |
| Msa1009110 | Msa1458510 | 0.811531 | 6.683041e-51 | -8.615850e-47 |
| Msa1026410 | Msa1458510 | 0.814168 | 1.767130e-51 | -8.615850e-47 |
| Msa1033780 | Msa1458510 | 0.819691 | 1.016775e-52 | -8.615850e-47 |
| Msa1039710 | Msa1458510 | -0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa1073660 | Msa1458510 | 0.815438 | 9.244929e-52 | -8.615850e-47 |
| Msa1077340 | Msa1458510 | 0.812345 | 4.443211e-51 | -8.615850e-47 |
| Msa0243480 | Msa1458510 | 0.810838 | 9.443929e-51 | -8.615850e-47 |
| Msa0244140 | Msa1458510 | 0.815617 | 8.433336e-52 | -8.615850e-47 |
| Msa0244190 | Msa1458510 | 0.834972 | 2.199252e-56 | -8.615850e-47 |
| Msa0271550 | Msa1458510 | 0.826034 | 3.385484e-54 | -8.615850e-47 |
| Msa0281930 | Msa1458510 | 0.820273 | 7.484395e-53 | -8.615850e-47 |
| Msa0308460 | Msa1458510 | 0.816610 | 5.059375e-52 | -8.615850e-47 |
| Msa0319290 | Msa1458510 | 0.806075 | 9.808940e-50 | -8.615850e-47 |
| Msa0321080 | Msa1458510 | 0.822060 | 2.898721e-53 | -8.615850e-47 |
| Msa0333650 | Msa1458510 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0342070 | Msa1458510 | 0.847909 | 8.578894e-60 | -8.615850e-47 |
| Msa0350840 | Msa1458510 | 0.806747 | 7.079239e-50 | -8.615850e-47 |
| Msa1115280 | Msa1458510 | 0.816063 | 6.705916e-52 | -8.615850e-47 |
| Msa1121660 | Msa1458510 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
| Msa1130390 | Msa1458510 | 0.939575 | 1.009312e-99 | -8.615850e-47 |
| Msa1138530 | Msa1458510 | 0.825865 | 3.712874e-54 | -8.615850e-47 |
| Msa1140000 | Msa1458510 | 0.807939 | 3.956811e-50 | -8.615850e-47 |
| Msa1150790 | Msa1458510 | 0.811745 | 6.002482e-51 | -8.615850e-47 |
| Msa1150810 | Msa1458510 | 0.802165 | 6.385267e-49 | -8.615850e-47 |
| Msa1201200 | Msa1458510 | 0.852978 | 3.236150e-61 | -8.615850e-47 |
| Msa1201230 | Msa1458510 | 0.811946 | 5.429501e-51 | -8.615850e-47 |
| Msa1204440 | Msa1458510 | 0.818613 | 1.788745e-52 | -8.615850e-47 |
| Msa1205390 | Msa1458510 | 0.829786 | 4.236875e-55 | -8.615850e-47 |
| Msa1210110 | Msa1458510 | 0.811346 | 7.329086e-51 | -8.615850e-47 |
| Msa0483800 | Msa1458510 | 0.818752 | 1.664047e-52 | -8.615850e-47 |
| Msa0485490 | Msa1458510 | 0.817408 | 3.349787e-52 | -8.615850e-47 |
| Msa0490380 | Msa1458510 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa0496210 | Msa1458510 | 0.801723 | 7.872053e-49 | -8.615850e-47 |
| Msa0506300 | Msa1458510 | 0.823640 | 1.242631e-53 | -8.615850e-47 |
| Msa0511620 | Msa1458510 | 0.800044 | 1.733744e-48 | -8.615850e-47 |
| Msa0517570 | Msa1458510 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0520330 | Msa1458510 | 0.836649 | 8.267880e-57 | -8.615850e-47 |
| Msa0526070 | Msa1458510 | -0.810522 | 1.105356e-50 | -8.615850e-47 |
| Msa0574570 | Msa1458510 | 0.808031 | 3.781915e-50 | -8.615850e-47 |
| Msa0580920 | Msa1458510 | 0.814876 | 1.232150e-51 | -8.615850e-47 |
| Msa0870060 | Msa1458510 | 0.890384 | 1.034150e-73 | -8.615850e-47 |
| Msa0870830 | Msa1458510 | 0.820274 | 7.479115e-53 | -8.615850e-47 |
| Msa0874630 | Msa1458510 | 0.853178 | 2.837479e-61 | -8.615850e-47 |
| Msa0875050 | Msa1458510 | 0.806715 | 7.190927e-50 | -8.615850e-47 |
| Msa0876360 | Msa1458510 | 0.838637 | 2.554422e-57 | -8.615850e-47 |
| Msa0886330 | Msa1458510 | -0.823966 | 1.042093e-53 | -8.615850e-47 |
| Msa0898320 | Msa1458510 | 0.802261 | 6.102560e-49 | -8.615850e-47 |
| Msa0903370 | Msa1458510 | 0.851993 | 6.176505e-61 | -8.615850e-47 |
| Msa0913480 | Msa1458510 | -0.816036 | 6.800838e-52 | -8.615850e-47 |
| Msa0919530 | Msa1458510 | 0.817831 | 2.689085e-52 | -8.615850e-47 |
| Msa0925870 | Msa1458510 | 0.822017 | 2.965717e-53 | -8.615850e-47 |
| Msa0932190 | Msa1458510 | 0.805729 | 1.159677e-49 | -8.615850e-47 |
| Msa0935770 | Msa1458510 | 0.845083 | 5.066019e-59 | -8.615850e-47 |
| Msa0936530 | Msa1458510 | 0.846367 | 2.271105e-59 | -8.615850e-47 |
| Msa0936550 | Msa1458510 | 0.811817 | 5.791298e-51 | -8.615850e-47 |
| Msa0961490 | Msa1458510 | 0.830970 | 2.175654e-55 | -8.615850e-47 |
| Msa0968150 | Msa1458510 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0970230 | Msa1458510 | 0.803614 | 3.205771e-49 | -8.615850e-47 |
| Msa0972770 | Msa1458510 | 0.891107 | 5.368513e-74 | -8.615850e-47 |
| Msa0972810 | Msa1458510 | 0.817256 | 3.623405e-52 | -8.615850e-47 |
| Msa0973520 | Msa1458510 | 0.834849 | 2.363141e-56 | -8.615850e-47 |
| Msa0973600 | Msa1458510 | 0.805428 | 1.341428e-49 | -8.615850e-47 |
| Msa0976290 | Msa1458510 | 0.833111 | 6.434827e-56 | -8.615850e-47 |
| Msa0978700 | Msa1458510 | 0.830085 | 3.581092e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458510 | MtrunA17_Chr7g0275581 | 97.075 | 718 | 16 | 1 | 1 | 713 | 1 | 718 | 0.0 | 1438 |
| Msa1458510 | MtrunA17_Chr8g0347121 | 63.276 | 757 | 205 | 8 | 1 | 713 | 1 | 728 | 0.0 | 941 |
| Msa1458510 | MtrunA17_Chr3g0126541 | 64.336 | 715 | 239 | 8 | 7 | 713 | 7 | 713 | 0.0 | 927 |
| Msa1458510 | MtrunA17_Chr1g0158861 | 62.901 | 717 | 240 | 9 | 7 | 709 | 8 | 712 | 0.0 | 893 |
| Msa1458510 | MtrunA17_Chr4g0073941 | 52.260 | 708 | 307 | 11 | 16 | 710 | 38 | 727 | 0.0 | 709 |
| Msa1458510 | MtrunA17_Chr2g0305771 | 50.986 | 659 | 285 | 10 | 80 | 711 | 40 | 687 | 0.0 | 662 |
| Msa1458510 | MtrunA17_Chr4g0001481 | 51.298 | 655 | 293 | 9 | 74 | 710 | 92 | 738 | 0.0 | 657 |
| Msa1458510 | MtrunA17_Chr2g0326871 | 51.402 | 642 | 284 | 10 | 83 | 711 | 77 | 703 | 0.0 | 650 |
| Msa1458510 | MtrunA17_Chr3g0139071 | 50.075 | 663 | 290 | 10 | 80 | 711 | 70 | 722 | 0.0 | 646 |
| Msa1458510 | MtrunA17_Chr7g0228181 | 48.752 | 681 | 315 | 10 | 52 | 709 | 9 | 678 | 0.0 | 640 |
| Msa1458510 | MtrunA17_Chr4g0028861 | 53.752 | 573 | 240 | 9 | 80 | 639 | 121 | 681 | 0.0 | 627 |
| Msa1458510 | MtrunA17_Chr1g0181121 | 46.945 | 671 | 321 | 11 | 60 | 708 | 21 | 678 | 0.0 | 619 |
| Msa1458510 | MtrunA17_Chr3g0125651 | 48.718 | 663 | 295 | 11 | 82 | 709 | 35 | 687 | 0.0 | 616 |
| Msa1458510 | MtrunA17_Chr6g0481021 | 38.783 | 575 | 327 | 11 | 83 | 639 | 123 | 690 | 1.32e-121 | 379 |
| Msa1458510 | MtrunA17_Chr6g0480671 | 37.997 | 579 | 331 | 10 | 82 | 643 | 192 | 759 | 1.86e-116 | 367 |
| Msa1458510 | MtrunA17_Chr6g0480851 | 37.586 | 580 | 330 | 13 | 83 | 643 | 184 | 750 | 3.64e-114 | 361 |
| Msa1458510 | MtrunA17_Chr6g0480781 | 34.380 | 573 | 337 | 12 | 83 | 632 | 169 | 725 | 1.01e-110 | 353 |
| Msa1458510 | MtrunA17_Chr8g0360821 | 34.142 | 577 | 340 | 11 | 84 | 635 | 63 | 624 | 9.27e-109 | 345 |
| Msa1458510 | MtrunA17_Chr7g0218341 | 34.024 | 579 | 343 | 12 | 82 | 635 | 108 | 672 | 2.65e-96 | 313 |
| Msa1458510 | MtrunA17_Chr6g0480741 | 32.628 | 567 | 354 | 10 | 82 | 632 | 114 | 668 | 6.49e-92 | 300 |
| Msa1458510 | MtrunA17_Chr6g0480681 | 32.670 | 603 | 344 | 16 | 83 | 640 | 115 | 700 | 6.17e-87 | 289 |
| Msa1458510 | MtrunA17_Chr2g0318561 | 35.000 | 460 | 262 | 9 | 199 | 635 | 2 | 447 | 6.11e-85 | 276 |
| Msa1458510 | MtrunA17_Chr5g0395411 | 40.291 | 206 | 106 | 4 | 83 | 287 | 172 | 361 | 3.34e-46 | 169 |
| Msa1458510 | MtrunA17_Chr5g0395421 | 36.913 | 298 | 171 | 6 | 331 | 616 | 63 | 355 | 3.46e-46 | 169 |
| Msa1458510 | MtrunA17_Chr2g0326861 | 41.463 | 205 | 106 | 4 | 158 | 355 | 14 | 211 | 7.85e-45 | 160 |
| Msa1458510 | MtrunA17_Chr6g0480771 | 34.413 | 247 | 145 | 5 | 403 | 637 | 12 | 253 | 3.88e-35 | 135 |
| Msa1458510 | MtrunA17_Chr6g0480841 | 36.788 | 193 | 108 | 4 | 457 | 637 | 2 | 192 | 1.62e-27 | 110 |
| Msa1458510 | MtrunA17_Chr2g0326851 | 47.692 | 130 | 62 | 3 | 581 | 709 | 7 | 131 | 9.95e-27 | 105 |
| Msa1458510 | MtrunA17_Chr6g0480751 | 34.815 | 135 | 84 | 1 | 70 | 200 | 81 | 215 | 5.54e-21 | 92.4 |
| Msa1458510 | MtrunA17_Chr6g0480791 | 35.294 | 119 | 76 | 1 | 83 | 200 | 172 | 290 | 7.96e-21 | 93.6 |
| Msa1458510 | MtrunA17_Chr4g0063141 | 20.896 | 469 | 273 | 14 | 83 | 542 | 46 | 425 | 1.58e-16 | 84.0 |
| Msa1458510 | MtrunA17_Chr2g0318551 | 29.870 | 154 | 93 | 5 | 78 | 227 | 58 | 200 | 1.25e-15 | 76.6 |
| Msa1458510 | MtrunA17_Chr3g0138671 | 24.870 | 193 | 144 | 1 | 358 | 550 | 243 | 434 | 1.97e-14 | 77.0 |
| Msa1458510 | MtrunA17_Chr2g0277651 | 24.590 | 183 | 137 | 1 | 357 | 539 | 262 | 443 | 3.97e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458510 | AT5G53130.1 | 63.209 | 723 | 244 | 11 | 1 | 710 | 1 | 714 | 0.0 | 900 |
| Msa1458510 | AT4G01010.1 | 59.859 | 710 | 250 | 8 | 9 | 709 | 9 | 692 | 0.0 | 868 |
| Msa1458510 | AT4G01010.2 | 59.859 | 710 | 250 | 8 | 9 | 709 | 9 | 692 | 0.0 | 868 |
| Msa1458510 | AT1G01340.2 | 59.654 | 694 | 254 | 6 | 31 | 711 | 26 | 706 | 0.0 | 849 |
| Msa1458510 | AT1G01340.1 | 59.654 | 694 | 254 | 6 | 31 | 711 | 21 | 701 | 0.0 | 849 |
| Msa1458510 | AT2G46430.1 | 57.682 | 716 | 279 | 10 | 1 | 708 | 2 | 701 | 0.0 | 826 |
| Msa1458510 | AT2G46430.2 | 57.682 | 716 | 279 | 10 | 1 | 708 | 2 | 701 | 0.0 | 826 |
| Msa1458510 | AT5G57940.1 | 51.719 | 727 | 323 | 11 | 1 | 710 | 1 | 716 | 0.0 | 720 |
| Msa1458510 | AT5G57940.2 | 51.719 | 727 | 323 | 11 | 1 | 710 | 1 | 716 | 0.0 | 720 |
| Msa1458510 | AT4G30560.1 | 51.515 | 726 | 314 | 13 | 7 | 710 | 20 | 729 | 0.0 | 719 |
| Msa1458510 | AT4G30560.4 | 51.515 | 726 | 314 | 13 | 7 | 710 | 20 | 729 | 0.0 | 719 |
| Msa1458510 | AT4G30560.5 | 53.285 | 685 | 289 | 10 | 45 | 710 | 31 | 703 | 0.0 | 717 |
| Msa1458510 | AT4G30560.2 | 53.285 | 685 | 289 | 10 | 45 | 710 | 31 | 703 | 0.0 | 717 |
| Msa1458510 | AT4G30560.3 | 53.285 | 685 | 289 | 10 | 45 | 710 | 31 | 703 | 0.0 | 717 |
| Msa1458510 | AT2G23980.9 | 50.404 | 742 | 316 | 13 | 8 | 713 | 22 | 747 | 0.0 | 716 |
| Msa1458510 | AT2G23980.10 | 50.404 | 742 | 316 | 13 | 8 | 713 | 22 | 747 | 0.0 | 716 |
| Msa1458510 | AT2G23980.1 | 50.404 | 742 | 316 | 13 | 8 | 713 | 22 | 747 | 0.0 | 716 |
| Msa1458510 | AT2G23980.4 | 50.404 | 742 | 316 | 13 | 8 | 713 | 22 | 747 | 0.0 | 716 |
| Msa1458510 | AT2G23980.5 | 50.404 | 742 | 316 | 13 | 8 | 713 | 22 | 747 | 0.0 | 716 |
| Msa1458510 | AT5G57940.3 | 53.587 | 683 | 283 | 9 | 38 | 710 | 51 | 709 | 0.0 | 716 |
| Msa1458510 | AT2G23980.6 | 50.477 | 733 | 313 | 12 | 17 | 713 | 2 | 720 | 0.0 | 713 |
| Msa1458510 | AT2G23980.3 | 49.020 | 765 | 315 | 14 | 8 | 713 | 22 | 770 | 0.0 | 702 |
| Msa1458510 | AT2G23980.2 | 49.020 | 765 | 315 | 14 | 8 | 713 | 22 | 770 | 0.0 | 702 |
| Msa1458510 | AT2G23980.8 | 49.020 | 765 | 315 | 14 | 8 | 713 | 22 | 770 | 0.0 | 702 |
| Msa1458510 | AT2G23980.7 | 49.020 | 765 | 315 | 14 | 8 | 713 | 22 | 770 | 0.0 | 702 |
| Msa1458510 | AT1G19780.1 | 48.620 | 761 | 307 | 15 | 7 | 710 | 13 | 746 | 0.0 | 683 |
| Msa1458510 | AT1G15990.1 | 49.067 | 750 | 313 | 17 | 7 | 711 | 13 | 738 | 0.0 | 673 |
| Msa1458510 | AT2G24610.1 | 50.898 | 668 | 277 | 12 | 80 | 709 | 69 | 723 | 0.0 | 658 |
| Msa1458510 | AT2G24610.2 | 50.898 | 668 | 277 | 12 | 80 | 709 | 84 | 738 | 0.0 | 656 |
| Msa1458510 | AT2G28260.1 | 50.845 | 651 | 278 | 11 | 73 | 711 | 58 | 678 | 0.0 | 642 |
| Msa1458510 | AT2G28260.2 | 50.998 | 651 | 277 | 11 | 73 | 711 | 18 | 638 | 0.0 | 642 |
| Msa1458510 | AT5G14870.1 | 48.006 | 677 | 298 | 12 | 80 | 712 | 37 | 703 | 0.0 | 627 |
| Msa1458510 | AT4G30360.1 | 49.319 | 661 | 293 | 12 | 81 | 711 | 69 | 717 | 0.0 | 625 |
| Msa1458510 | AT3G48010.1 | 45.609 | 706 | 325 | 15 | 52 | 708 | 9 | 704 | 0.0 | 607 |
| Msa1458510 | AT2G46440.1 | 50.000 | 614 | 291 | 8 | 69 | 671 | 13 | 621 | 0.0 | 594 |
| Msa1458510 | AT2G46450.4 | 44.796 | 663 | 340 | 11 | 52 | 708 | 2 | 644 | 0.0 | 564 |
| Msa1458510 | AT2G46450.1 | 44.796 | 663 | 340 | 11 | 52 | 708 | 2 | 644 | 0.0 | 564 |
| Msa1458510 | AT2G46450.2 | 43.223 | 664 | 328 | 12 | 52 | 709 | 2 | 622 | 0.0 | 530 |
| Msa1458510 | AT2G46450.3 | 43.721 | 645 | 320 | 11 | 71 | 709 | 2 | 609 | 1.24e-180 | 528 |
| Msa1458510 | AT1G19780.2 | 51.648 | 546 | 218 | 11 | 199 | 710 | 2 | 535 | 1.84e-180 | 525 |
| Msa1458510 | AT2G46440.2 | 54.402 | 443 | 191 | 6 | 238 | 671 | 3 | 443 | 2.37e-157 | 462 |
| Msa1458510 | AT3G17690.1 | 34.872 | 585 | 361 | 10 | 71 | 642 | 142 | 719 | 7.16e-118 | 370 |
| Msa1458510 | AT3G17700.1 | 35.751 | 579 | 348 | 10 | 70 | 632 | 175 | 745 | 2.39e-111 | 354 |
| Msa1458510 | AT5G54250.2 | 33.846 | 585 | 339 | 13 | 82 | 635 | 78 | 645 | 8.45e-105 | 335 |
| Msa1458510 | AT5G54250.1 | 33.846 | 585 | 339 | 13 | 82 | 635 | 78 | 645 | 8.45e-105 | 335 |
| Msa1458510 | AT5G54250.4 | 33.846 | 585 | 339 | 13 | 82 | 635 | 78 | 645 | 8.45e-105 | 335 |
| Msa1458510 | AT5G15410.2 | 34.276 | 601 | 357 | 12 | 62 | 632 | 84 | 676 | 2.90e-103 | 332 |
| Msa1458510 | AT5G15410.1 | 34.276 | 601 | 357 | 12 | 62 | 632 | 85 | 677 | 3.52e-103 | 332 |
| Msa1458510 | AT3G17690.2 | 34.809 | 497 | 313 | 6 | 71 | 562 | 142 | 632 | 3.08e-102 | 327 |
| Msa1458510 | AT5G54250.3 | 33.333 | 585 | 337 | 14 | 82 | 635 | 78 | 640 | 1.98e-99 | 321 |
| Msa1458510 | AT3G17700.2 | 35.756 | 509 | 301 | 8 | 70 | 566 | 175 | 669 | 1.49e-98 | 318 |
| Msa1458510 | AT3G17690.3 | 32.982 | 379 | 245 | 4 | 71 | 444 | 142 | 516 | 1.68e-70 | 239 |
| Msa1458510 | AT4G22200.2 | 20.941 | 425 | 266 | 11 | 127 | 550 | 100 | 455 | 4.95e-15 | 79.3 |
| Msa1458510 | AT4G22200.1 | 20.941 | 425 | 266 | 11 | 127 | 550 | 100 | 455 | 6.08e-15 | 79.3 |
| Msa1458510 | AT4G32650.3 | 22.826 | 184 | 141 | 1 | 358 | 541 | 276 | 458 | 2.01e-11 | 67.8 |
| Msa1458510 | AT4G32650.1 | 22.826 | 184 | 141 | 1 | 358 | 541 | 276 | 458 | 2.07e-11 | 67.8 |
| Msa1458510 | AT4G32650.2 | 22.826 | 184 | 141 | 1 | 358 | 541 | 276 | 458 | 2.33e-11 | 67.4 |
Find 127 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAACTACTGCATGTTTA+AGG | 0.112494 | tig0039661:-13727 | Msa1458510:intron |
| TTTGTCTGTCCTTCATTTAC+AGG | 0.139208 | tig0039661:+12862 | None:intergenic |
| GACACAAAGACCTTCAATTT+TGG | 0.153222 | tig0039661:-11691 | Msa1458510:CDS |
| ATGTCTCTTCTGAGATCTTT+AGG | 0.165544 | tig0039661:+10817 | None:intergenic |
| TGTTGATAAGACGTCTAAAT+TGG | 0.175315 | tig0039661:+10300 | None:intergenic |
| AACATTGTCACAGAAATATT+TGG | 0.196110 | tig0039661:-11010 | Msa1458510:intron |
| GGTATTTCAGATTATTGTTT+TGG | 0.212364 | tig0039661:-12193 | Msa1458510:intron |
| AACAACTCCAACACACTTTC+AGG | 0.217196 | tig0039661:-10274 | Msa1458510:intron |
| GGTGGGGTTTGCGAAATTTA+AGG | 0.232956 | tig0039661:-11591 | Msa1458510:intron |
| AGAAGTTCTTCTACTGCTTT+TGG | 0.250588 | tig0039661:-11612 | Msa1458510:CDS |
| GATCTTTCATGATTCATTCT+TGG | 0.252507 | tig0039661:-11791 | Msa1458510:CDS |
| GGTGCCAATGTTTGAGAAAA+TGG | 0.252844 | tig0039661:-10651 | Msa1458510:CDS |
| ATTCTTTGCTTCAAGTTATC+AGG | 0.254362 | tig0039661:+10910 | None:intergenic |
| GCTTTATTCTACATGCAAAA+TGG | 0.276870 | tig0039661:+9755 | None:intergenic |
| TGTCTCTTCTGAGATCTTTA+GGG | 0.282650 | tig0039661:+10818 | None:intergenic |
| ATCTTTCATGATTCATTCTT+GGG | 0.294155 | tig0039661:-11790 | Msa1458510:CDS |
| TTTGTGTCCTTGATTTCATC+AGG | 0.318413 | tig0039661:+11706 | None:intergenic |
| ATTTGGAATCTACAACTGTT+AGG | 0.325785 | tig0039661:-10993 | Msa1458510:CDS |
| GGTAGATTCGAGGAGGAGTT+TGG | 0.326898 | tig0039661:+10404 | None:intergenic |
| TTGTTAAAATTTGCAGCATT+AGG | 0.339108 | tig0039661:+13794 | None:intergenic |
| CATGATTCATTCTTGGGTTG+TGG | 0.339182 | tig0039661:-11784 | Msa1458510:CDS |
| AAATCAGGCTCAGCTGGCTT+TGG | 0.369096 | tig0039661:+9919 | None:intergenic |
| AGCTAACTGGTATCTGCTTT+CGG | 0.371915 | tig0039661:-11860 | Msa1458510:CDS |
| GTCATTCCAGGTTTGATGAT+TGG | 0.372248 | tig0039661:-13041 | Msa1458510:intron |
| GTGCTCCGTTATTAATTTGT+AGG | 0.372691 | tig0039661:-14059 | Msa1458510:five_prime_UTR |
| ATGAAAAGCATCTCATCAAC+TGG | 0.403707 | tig0039661:+10545 | None:intergenic |
| ACAACAAATGGTGGAAGAAC+TGG | 0.406941 | tig0039661:-10497 | Msa1458510:CDS |
| AACTCATTATTTCTAATGCC+TGG | 0.409859 | tig0039661:-10467 | Msa1458510:intron |
| ATCATCTTTCAGTTCAGAAC+CGG | 0.410694 | tig0039661:-12613 | Msa1458510:CDS |
| TGTAGAATAAAGCACTTTGT+TGG | 0.410781 | tig0039661:-9745 | Msa1458510:three_prime_UTR |
| TCAGGCTCAGCTGGCTTTGG+AGG | 0.411708 | tig0039661:+9922 | None:intergenic |
| ATAAAGAGAGATATGATTGA+TGG | 0.412373 | tig0039661:+13822 | None:intergenic |
| GGACGAATTCGCAGTAGTCT+TGG | 0.426942 | tig0039661:+12090 | None:intergenic |
| CTCTTCTCTGTATACAGAAC+TGG | 0.432902 | tig0039661:+10590 | None:intergenic |
| ATCAGGTGGTTGGAGCTAAC+TGG | 0.435899 | tig0039661:-11873 | Msa1458510:intron |
| AGAAGAAGGCGCAATAAATC+CGG | 0.441145 | tig0039661:+12594 | None:intergenic |
| ATCAATTATTCCACTTCCAC+AGG | 0.444563 | tig0039661:-12485 | Msa1458510:intron |
| TTCTCCCTACAAATTAATAA+CGG | 0.444916 | tig0039661:+14054 | None:intergenic |
| AAAACTTAAAATTCTTAGCT+AGG | 0.446530 | tig0039661:+9876 | None:intergenic |
| TCTCAACAATACTTGTAGTT+CGG | 0.447827 | tig0039661:-11734 | Msa1458510:CDS |
| GTAGAAATAGAAATAGAAAG+TGG | 0.450710 | tig0039661:+13866 | None:intergenic |
| GTTGATAAGACGTCTAAATT+GGG | 0.453470 | tig0039661:+10301 | None:intergenic |
| AGACAAGCTACAAGATGCTT+TGG | 0.455256 | tig0039661:-10076 | Msa1458510:CDS |
| TAGAAAGTGGAAGGAAATTG+AGG | 0.456437 | tig0039661:+13879 | None:intergenic |
| TCTTCCACCATTTGTTGTCA+TGG | 0.459499 | tig0039661:+10502 | None:intergenic |
| GAAAATGGATGCGCAATTGT+TGG | 0.462399 | tig0039661:-10636 | Msa1458510:CDS |
| AGGGGCCTATGCTTCAGAAA+TGG | 0.463837 | tig0039661:-12801 | Msa1458510:CDS |
| ATTCAGAAGACCGTCTTCAA+TGG | 0.467231 | tig0039661:-12890 | Msa1458510:CDS |
| AAAGAAGTAACTAGAACTTC+AGG | 0.467604 | tig0039661:-12060 | Msa1458510:CDS |
| GCAGTGAAATCAGGCTCAGC+TGG | 0.470966 | tig0039661:+9913 | None:intergenic |
| TTTGGAATCTACAACTGTTA+GGG | 0.471097 | tig0039661:-10992 | Msa1458510:CDS |
| TGCTCCGTTATTAATTTGTA+GGG | 0.473396 | tig0039661:-14058 | Msa1458510:five_prime_UTR |
| TTCATAATTAAAACTACTTG+TGG | 0.474112 | tig0039661:+13197 | None:intergenic |
| ATGTAAGATACCTGTGGAAG+TGG | 0.474345 | tig0039661:+12475 | None:intergenic |
| GTCGCTACCATGACAACAAA+TGG | 0.479163 | tig0039661:-10509 | Msa1458510:CDS |
| AATTCCAAACTTGAAAAGCT+CGG | 0.479446 | tig0039661:-12166 | Msa1458510:CDS |
| GCGCAAAATTCTTGATCCAC+AGG | 0.484054 | tig0039661:-12821 | Msa1458510:CDS |
| AACAAGAATAGCTACCTCCT+TGG | 0.484697 | tig0039661:-13776 | Msa1458510:five_prime_UTR |
| TGAAGGACAGACAAAGAAGT+TGG | 0.488740 | tig0039661:-12854 | Msa1458510:CDS |
| TCTACTGTTCTAGTTGAAGT+AGG | 0.489534 | tig0039661:+10383 | None:intergenic |
| ATTCCAAACTTGAAAAGCTC+GGG | 0.492361 | tig0039661:-12165 | Msa1458510:CDS |
| TAGAATCACAGGTGCGGTGT+TGG | 0.493114 | tig0039661:-11837 | Msa1458510:CDS |
| TTGTTCCATTTCTGAAGCAT+AGG | 0.493360 | tig0039661:+12796 | None:intergenic |
| CGCAAAATTCTTGATCCACA+GGG | 0.496850 | tig0039661:-12820 | Msa1458510:CDS |
| GTAAAATATTCCAAAATTGA+AGG | 0.500942 | tig0039661:+11681 | None:intergenic |
| TTGTCTGTCCTTCATTTACA+GGG | 0.501508 | tig0039661:+12863 | None:intergenic |
| AAGAGATGAGAGTGAAGAGG+AGG | 0.503300 | tig0039661:-10966 | Msa1458510:CDS |
| AGAGATGAGAGTGAAGAGGA+GGG | 0.512738 | tig0039661:-10965 | Msa1458510:CDS |
| GTGCAACAATATATGCATCA+AGG | 0.513200 | tig0039661:-10023 | Msa1458510:CDS |
| GAAGGTATGAACAATACAAA+TGG | 0.513283 | tig0039661:-10885 | Msa1458510:CDS |
| ACAAGATGCTTTGGCAAATG+AGG | 0.517602 | tig0039661:-10067 | Msa1458510:CDS |
| GCTGGCTTTGGAGGCAAAAG+AGG | 0.520461 | tig0039661:+9931 | None:intergenic |
| TTGACAGAGACAGCATGGGC+TGG | 0.520818 | tig0039661:-12033 | Msa1458510:CDS |
| AGAAAGTGGAAGGAAATTGA+GGG | 0.521052 | tig0039661:+13880 | None:intergenic |
| AGTTGAAGCATTTGCACTCA+AGG | 0.523020 | tig0039661:-10348 | Msa1458510:CDS |
| TACAAATGGCAAGAAAATAG+AGG | 0.529141 | tig0039661:-10871 | Msa1458510:CDS |
| CGTGTTTCATACAAGCAGCT+TGG | 0.529225 | tig0039661:-10146 | Msa1458510:CDS |
| ATTACTTATTGGAAACATGC+AGG | 0.534257 | tig0039661:-11339 | Msa1458510:intron |
| CTCTTCTGAGATCTTTAGGG+AGG | 0.539483 | tig0039661:+10821 | None:intergenic |
| ATGGTTCACCCTGTAAATGA+AGG | 0.544076 | tig0039661:-12871 | Msa1458510:CDS |
| TTGTTGTATAAGTATGCAGT+AGG | 0.547340 | tig0039661:-9789 | Msa1458510:three_prime_UTR |
| TCTGCTTTCGGTAGAATCAC+AGG | 0.550889 | tig0039661:-11848 | Msa1458510:CDS |
| TGACATAAGTAGTTGTCTTG+AGG | 0.551121 | tig0039661:+11414 | None:intergenic |
| AGTTGAAGTAGGTAGATTCG+AGG | 0.551450 | tig0039661:+10394 | None:intergenic |
| GAAGGATCAACTATAAGCCT+TGG | 0.552180 | tig0039661:-10045 | Msa1458510:CDS |
| AAATAGAAATAGAAAGTGGA+AGG | 0.554942 | tig0039661:+13870 | None:intergenic |
| AGGAAGAGATGAGAGTGAAG+AGG | 0.555226 | tig0039661:-10969 | Msa1458510:CDS |
| ATTCGCCGCAATGGAAGACA+TGG | 0.558436 | tig0039661:-10173 | Msa1458510:CDS |
| AGCAACAAACTTCAAGTCAT+CGG | 0.560042 | tig0039661:+10325 | None:intergenic |
| GGTTGACCCTGATGAAATCA+AGG | 0.563314 | tig0039661:-11713 | Msa1458510:CDS |
| TTGTGTCCTTGATTTCATCA+GGG | 0.564618 | tig0039661:+11707 | None:intergenic |
| TTCAAAACAGCACTTACACT+TGG | 0.564904 | tig0039661:+12958 | None:intergenic |
| CTTTGTAATCACATGTGTGC+TGG | 0.566586 | tig0039661:-12770 | Msa1458510:CDS |
| CTAGTTACTTCTTTGAATAG+CGG | 0.567096 | tig0039661:+12069 | None:intergenic |
| GCATATTGACAGAGACAGCA+TGG | 0.567615 | tig0039661:-12038 | Msa1458510:CDS |
| AAGTGGAAGGAAATTGAGGG+AGG | 0.567987 | tig0039661:+13883 | None:intergenic |
| CGATGCTCTACAATCACTTG+TGG | 0.568191 | tig0039661:-11659 | Msa1458510:CDS |
| GCTGTGGCATATCAGGTGGT+TGG | 0.570471 | tig0039661:-11883 | Msa1458510:intron |
| CATGACTTGCTAGCATGTAG+AGG | 0.576581 | tig0039661:+11992 | None:intergenic |
| AGCCATACCTGAAAGTGTGT+TGG | 0.577823 | tig0039661:+10267 | None:intergenic |
| AGTGGAAGGAAATTGAGGGA+GGG | 0.582392 | tig0039661:+13884 | None:intergenic |
| CAAAGGGACTTAAATTTGTG+AGG | 0.583675 | tig0039661:-13172 | Msa1458510:intron |
| ATGTGTGCTGGCAATTTCTG+TGG | 0.584670 | tig0039661:-12758 | Msa1458510:CDS |
| TTCTGAAGCATAGGCCCCTG+TGG | 0.593264 | tig0039661:+12805 | None:intergenic |
| GATGCTTTGGCAAATGAGGA+AGG | 0.599672 | tig0039661:-10063 | Msa1458510:CDS |
| TGAAGTAGGTAGATTCGAGG+AGG | 0.612728 | tig0039661:+10397 | None:intergenic |
| GAAGGTCATATTCGCCGCAA+TGG | 0.616822 | tig0039661:-10182 | Msa1458510:intron |
| ATTGGAAGAAGATTTGTGAG+TGG | 0.617184 | tig0039661:-12931 | Msa1458510:CDS |
| CAAGACAACTACTTATGTCA+CGG | 0.621549 | tig0039661:-11411 | Msa1458510:CDS |
| GGAATCTACAACTGTTAGGG+AGG | 0.622363 | tig0039661:-10989 | Msa1458510:CDS |
| AAGCAGTAGAAGAACTTCTG+AGG | 0.632929 | tig0039661:+11616 | None:intergenic |
| ACAGGGTGAACCATTGAAGA+CGG | 0.633804 | tig0039661:+12880 | None:intergenic |
| ACTTGAAGCAAAGAATTCGA+AGG | 0.635824 | tig0039661:-10903 | Msa1458510:CDS |
| TTGTGTTGTGTTGAGTACAG+TGG | 0.643828 | tig0039661:-13222 | Msa1458510:five_prime_UTR |
| GTATATGCATATAAATACAA+TGG | 0.644039 | tig0039661:+9829 | None:intergenic |
| AGAGGAGGGATGCAGAACGA+TGG | 0.648495 | tig0039661:-10951 | Msa1458510:CDS |
| TTCGCCGCAATGGAAGACAT+GGG | 0.649271 | tig0039661:-10172 | Msa1458510:CDS |
| CATATTGACAGAGACAGCAT+GGG | 0.658548 | tig0039661:-12037 | Msa1458510:CDS |
| ATGCATATATTGTTGCACCA+AGG | 0.658649 | tig0039661:+10028 | None:intergenic |
| GAACTTCTGAGGAAAATCTG+TGG | 0.660686 | tig0039661:+11627 | None:intergenic |
| AATGGCAATGAAAATCGCAA+AGG | 0.663936 | tig0039661:+11382 | None:intergenic |
| GCTACCATGACAACAAATGG+TGG | 0.669524 | tig0039661:-10506 | Msa1458510:CDS |
| TCGCCGCAATGGAAGACATG+GGG | 0.689004 | tig0039661:-10171 | Msa1458510:CDS |
| GCACCCCATGTCTTCCATTG+CGG | 0.689623 | tig0039661:+10168 | None:intergenic |
| TTTCGGTAGAATCACAGGTG+CGG | 0.705875 | tig0039661:-11843 | Msa1458510:CDS |
| AAAAGAGGTAGTAGTCTCTG+CGG | 0.729813 | tig0039661:+9946 | None:intergenic |
| GCAAAATTCTTGATCCACAG+GGG | 0.734232 | tig0039661:-12819 | Msa1458510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTCATATATTTTATA+GGG | - | tig0039661:12522-12541 | Msa1458510:CDS | 10.0% |
| !! | AAAATAATTAAGAGAAAATA+TGG | + | tig0039661:13562-13581 | None:intergenic | 10.0% |
| !!! | AAATTTATACTATTTTTTGA+AGG | - | tig0039661:13596-13615 | Msa1458510:intron | 10.0% |
| !! | TTCAAATTAATAACAAGATT+TGG | - | tig0039661:10717-10736 | Msa1458510:intron | 15.0% |
| !!! | GTTTTTCTCATATATTTTAT+AGG | - | tig0039661:12521-12540 | Msa1458510:CDS | 15.0% |
| !!! | TAAGAATTTTAAGTTTTGAT+AGG | - | tig0039661:13926-13945 | Msa1458510:five_prime_UTR | 15.0% |
| !!! | TCAAACAAATTAATTTGACT+TGG | + | tig0039661:10240-10259 | None:intergenic | 20.0% |
| !! | GTACTATTACAAAAATCAAT+AGG | + | tig0039661:10346-10365 | None:intergenic | 20.0% |
| !! | TTCATAATTAAAACTACTTG+TGG | + | tig0039661:10602-10621 | None:intergenic | 20.0% |
| !!! | AGTTTTAATTATGAATGCAA+AGG | - | tig0039661:10607-10626 | Msa1458510:CDS | 20.0% |
| !!! | GTTTTAATTATGAATGCAAA+GGG | - | tig0039661:10608-10627 | Msa1458510:CDS | 20.0% |
| !! | TAAACAAAAATGTCTTGATT+TGG | - | tig0039661:11095-11114 | Msa1458510:intron | 20.0% |
| !!! | TTTTTTGTTTTCAGTTAAGT+TGG | - | tig0039661:11502-11521 | Msa1458510:intron | 20.0% |
| !!! | ACATAATTTTGTTGTTGTTT+TGG | - | tig0039661:11582-11601 | Msa1458510:intron | 20.0% |
| !! | GTAAAATATTCCAAAATTGA+AGG | + | tig0039661:12118-12137 | None:intergenic | 20.0% |
| !!! | AATTTTCCATTGAAAAAACT+GGG | + | tig0039661:12301-12320 | None:intergenic | 20.0% |
| !!! | AAATTTTCCATTGAAAAAAC+TGG | + | tig0039661:12302-12321 | None:intergenic | 20.0% |
| !! | TTTCATATCAATGATCTAAT+AGG | + | tig0039661:12500-12519 | None:intergenic | 20.0% |
| !! | TATTAGATCATTGATATGAA+AGG | - | tig0039661:12499-12518 | Msa1458510:CDS | 20.0% |
| !! | TTATTTAAATCACTTGGATT+AGG | + | tig0039661:12618-12637 | None:intergenic | 20.0% |
| !! | TTATGCTTATTTAAATCACT+TGG | + | tig0039661:12624-12643 | None:intergenic | 20.0% |
| !! | AGCTCATTAATTAATAAAAG+AGG | + | tig0039661:12752-12771 | None:intergenic | 20.0% |
| !! | ACGAAAAATGATTTAATTGT+GGG | + | tig0039661:13060-13079 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTAATTTTGCATT+AGG | - | tig0039661:13124-13143 | Msa1458510:intron | 20.0% |
| !! | ATTGTAAAAAGAAAATTGAG+AGG | - | tig0039661:13680-13699 | Msa1458510:intron | 20.0% |
| !! | AAAACTTAAAATTCTTAGCT+AGG | + | tig0039661:13923-13942 | None:intergenic | 20.0% |
| !! | GTATATGCATATAAATACAA+TGG | + | tig0039661:13970-13989 | None:intergenic | 20.0% |
| ! | TTCTCCCTACAAATTAATAA+CGG | + | tig0039661:9745-9764 | None:intergenic | 25.0% |
| ! | AAATAGAAATAGAAAGTGGA+AGG | + | tig0039661:9929-9948 | None:intergenic | 25.0% |
| ! | GTAGAAATAGAAATAGAAAG+TGG | + | tig0039661:9933-9952 | None:intergenic | 25.0% |
| ! | ATAAAGAGAGATATGATTGA+TGG | + | tig0039661:9977-9996 | None:intergenic | 25.0% |
| ! | TTGTTAAAATTTGCAGCATT+AGG | + | tig0039661:10005-10024 | None:intergenic | 25.0% |
| !!! | TAGTACTTTTTCATCCATTA+TGG | - | tig0039661:10360-10379 | Msa1458510:CDS | 25.0% |
| !!! | TTAAATATCCAACTTGTTGA+TGG | - | tig0039661:10441-10460 | Msa1458510:intron | 25.0% |
| !!! | TAAATATCCAACTTGTTGAT+GGG | - | tig0039661:10442-10461 | Msa1458510:intron | 25.0% |
| !!! | ATTCACAATAGTTTGACTTT+TGG | - | tig0039661:10499-10518 | Msa1458510:CDS | 25.0% |
| ! | ACAAGTTTCTAATTTGATGT+TGG | - | tig0039661:10528-10547 | Msa1458510:CDS | 25.0% |
| !! | AATTTGATGTTGGATTTTAC+AGG | - | tig0039661:10538-10557 | Msa1458510:CDS | 25.0% |
| !!! | TAATCTTAGTTTTCCTAAGT+TGG | - | tig0039661:10682-10701 | Msa1458510:intron | 25.0% |
| ! | AATTTCTAACTATCCAACTT+AGG | + | tig0039661:10698-10717 | None:intergenic | 25.0% |
| ! | CTGGAATGTAAAAGAAAAAA+GGG | + | tig0039661:11065-11084 | None:intergenic | 25.0% |
| ! | ACTGGAATGTAAAAGAAAAA+AGG | + | tig0039661:11066-11085 | None:intergenic | 25.0% |
| !! | ACTCAAGTATCTTTTCATTA+TGG | + | tig0039661:11268-11287 | None:intergenic | 25.0% |
| ! | TATGACAAATGAGTTTACTT+TGG | + | tig0039661:11461-11480 | None:intergenic | 25.0% |
| !! | GGTATTTCAGATTATTGTTT+TGG | - | tig0039661:11603-11622 | Msa1458510:CDS | 25.0% |
| ! | AACAAATCCTTTGCTAAAAA+TGG | + | tig0039661:11658-11677 | None:intergenic | 25.0% |
| ! | ATCTTTCATGATTCATTCTT+GGG | - | tig0039661:12006-12025 | Msa1458510:CDS | 25.0% |
| ! | GAATAAAACCAATCCAAAAA+TGG | + | tig0039661:12435-12454 | None:intergenic | 25.0% |
| !!! | GTTTTATTCGCATTACTTAT+TGG | - | tig0039661:12446-12465 | Msa1458510:intron | 25.0% |
| !!! | GTCCATTTTTGCTTAATTTT+CGG | - | tig0039661:12698-12717 | Msa1458510:CDS | 25.0% |
| ! | AACATTGTCACAGAAATATT+TGG | - | tig0039661:12786-12805 | Msa1458510:CDS | 25.0% |
| ! | AAAATGATTTAATTGTGGGA+TGG | + | tig0039661:13056-13075 | None:intergenic | 25.0% |
| ! | GACGAAAAATGATTTAATTG+TGG | + | tig0039661:13061-13080 | None:intergenic | 25.0% |
| ! | CAATATATTATGTAAACACG+TGG | + | tig0039661:13083-13102 | None:intergenic | 25.0% |
| !! | TGCTCCGTTATTAATTTGTA+GGG | - | tig0039661:9738-9757 | Msa1458510:three_prime_UTR | 30.0% |
| !!! | TGATGTTTGTTTTGTTTCCA+AGG | + | tig0039661:10040-10059 | None:intergenic | 30.0% |
| AACAAACTACTGCATGTTTA+AGG | - | tig0039661:10069-10088 | Msa1458510:CDS | 30.0% | |
| AGAACATGCAAAAAGTAGAA+AGG | + | tig0039661:10152-10171 | None:intergenic | 30.0% | |
| ATGTTTGTTTCCTACATATG+TGG | - | tig0039661:10310-10329 | Msa1458510:CDS | 30.0% | |
| AAATATACCCATCAACAAGT+TGG | + | tig0039661:10452-10471 | None:intergenic | 30.0% | |
| ! | TTTTACATTCCAGTGATTGT+CGG | - | tig0039661:11072-11091 | Msa1458510:intron | 30.0% |
| !! | CAAAAATGTCTTGATTTGGA+TGG | - | tig0039661:11099-11118 | Msa1458510:intron | 30.0% |
| GTTAAAATGTAAGATACCTG+TGG | + | tig0039661:11330-11349 | None:intergenic | 30.0% | |
| !!! | TTGTTTTCAGTTAAGTTGGA+AGG | - | tig0039661:11506-11525 | Msa1458510:intron | 30.0% |
| !!! | TGTTTTCAGTTAAGTTGGAA+GGG | - | tig0039661:11507-11526 | Msa1458510:intron | 30.0% |
| AATTCCAAACTTGAAAAGCT+CGG | - | tig0039661:11630-11649 | Msa1458510:CDS | 30.0% | |
| CTAGTTACTTCTTTGAATAG+CGG | + | tig0039661:11730-11749 | None:intergenic | 30.0% | |
| AAAGAAGTAACTAGAACTTC+AGG | - | tig0039661:11736-11755 | Msa1458510:CDS | 30.0% | |
| ! | AACATTTTGTCATGGTAAGT+AGG | + | tig0039661:11869-11888 | None:intergenic | 30.0% |
| ! | GTGATCAAAACATTTTGTCA+TGG | + | tig0039661:11877-11896 | None:intergenic | 30.0% |
| GATCTTTCATGATTCATTCT+TGG | - | tig0039661:12005-12024 | Msa1458510:CDS | 30.0% | |
| TCTCAACAATACTTGTAGTT+CGG | - | tig0039661:12062-12081 | Msa1458510:CDS | 30.0% | |
| ! | GTCATATTTTACAGTTCTCT+TGG | - | tig0039661:12353-12372 | Msa1458510:intron | 30.0% |
| !!! | TTTCATTGCCATTTTTGGAT+TGG | - | tig0039661:12424-12443 | Msa1458510:intron | 30.0% |
| ATTACTTATTGGAAACATGC+AGG | - | tig0039661:12457-12476 | Msa1458510:intron | 30.0% | |
| ! | AACAGAAACGACATTTTCTA+TGG | - | tig0039661:12567-12586 | Msa1458510:CDS | 30.0% |
| !!! | ATCAGTGGTTTTGGATTTTT+GGG | + | tig0039661:12657-12676 | None:intergenic | 30.0% |
| !!! | AATCAGTGGTTTTGGATTTT+TGG | + | tig0039661:12658-12677 | None:intergenic | 30.0% |
| CTCCGAAAATTAAGCAAAAA+TGG | + | tig0039661:12703-12722 | None:intergenic | 30.0% | |
| ! | ATTTGGAATCTACAACTGTT+AGG | - | tig0039661:12803-12822 | Msa1458510:CDS | 30.0% |
| ! | TTTGGAATCTACAACTGTTA+GGG | - | tig0039661:12804-12823 | Msa1458510:CDS | 30.0% |
| ! | ATTCTTTGCTTCAAGTTATC+AGG | + | tig0039661:12889-12908 | None:intergenic | 30.0% |
| ! | GAAGGTATGAACAATACAAA+TGG | - | tig0039661:12911-12930 | Msa1458510:CDS | 30.0% |
| TACAAATGGCAAGAAAATAG+AGG | - | tig0039661:12925-12944 | Msa1458510:CDS | 30.0% | |
| ATTTAATTGTGGGATGGTTA+TGG | + | tig0039661:13050-13069 | None:intergenic | 30.0% | |
| !! | AACTCATTATTTCTAATGCC+TGG | - | tig0039661:13329-13348 | Msa1458510:intron | 30.0% |
| ! | GTTGATAAGACGTCTAAATT+GGG | + | tig0039661:13498-13517 | None:intergenic | 30.0% |
| ! | TGTTGATAAGACGTCTAAAT+TGG | + | tig0039661:13499-13518 | None:intergenic | 30.0% |
| TTGTTGTATAAGTATGCAGT+AGG | - | tig0039661:14007-14026 | Msa1458510:five_prime_UTR | 30.0% | |
| ! | GCTTTATTCTACATGCAAAA+TGG | + | tig0039661:14044-14063 | None:intergenic | 30.0% |
| ! | TGTAGAATAAAGCACTTTGT+TGG | - | tig0039661:14051-14070 | Msa1458510:five_prime_UTR | 30.0% |
| !! | GTGCTCCGTTATTAATTTGT+AGG | - | tig0039661:9737-9756 | Msa1458510:three_prime_UTR | 35.0% |
| AGAAAGTGGAAGGAAATTGA+GGG | + | tig0039661:9919-9938 | None:intergenic | 35.0% | |
| TAGAAAGTGGAAGGAAATTG+AGG | + | tig0039661:9920-9939 | None:intergenic | 35.0% | |
| !!! | TGTTTGTTTTGTTTCCAAGG+AGG | + | tig0039661:10037-10056 | None:intergenic | 35.0% |
| CAAAGGGACTTAAATTTGTG+AGG | - | tig0039661:10624-10643 | Msa1458510:CDS | 35.0% | |
| ATATGTCTCTTTGTCATTCC+AGG | - | tig0039661:10743-10762 | Msa1458510:intron | 35.0% | |
| ! | GTCATCTTTTAGTATAGAGC+AGG | - | tig0039661:10786-10805 | Msa1458510:CDS | 35.0% |
| TTCAAAACAGCACTTACACT+TGG | + | tig0039661:10841-10860 | None:intergenic | 35.0% | |
| !!! | AGTGCTGTTTTGAAGAGTAT+TGG | - | tig0039661:10847-10866 | Msa1458510:CDS | 35.0% |
| ATTGGAAGAAGATTTGTGAG+TGG | - | tig0039661:10865-10884 | Msa1458510:CDS | 35.0% | |
| TTGTCTGTCCTTCATTTACA+GGG | + | tig0039661:10936-10955 | None:intergenic | 35.0% | |
| TTTGTCTGTCCTTCATTTAC+AGG | + | tig0039661:10937-10956 | None:intergenic | 35.0% | |
| !! | TTGTTCCATTTCTGAAGCAT+AGG | + | tig0039661:11003-11022 | None:intergenic | 35.0% |
| !! | TTTTGTTTACCGACAATCAC+TGG | + | tig0039661:11084-11103 | None:intergenic | 35.0% |
| ATCATCTTTCAGTTCAGAAC+CGG | - | tig0039661:11183-11202 | Msa1458510:intron | 35.0% | |
| ! | TATCTTTTCATTATGGCGAC+AGG | + | tig0039661:11261-11280 | None:intergenic | 35.0% |
| ATCAATTATTCCACTTCCAC+AGG | - | tig0039661:11311-11330 | Msa1458510:intron | 35.0% | |
| TAGAGGATCAGAATGAGTAT+TGG | + | tig0039661:11390-11409 | None:intergenic | 35.0% | |
| GATGTAAAGGATCCATGTTA+TGG | - | tig0039661:11432-11451 | Msa1458510:CDS | 35.0% | |
| TTACTTTGGCTACCATAACA+TGG | + | tig0039661:11447-11466 | None:intergenic | 35.0% | |
| ATTCCAAACTTGAAAAGCTC+GGG | - | tig0039661:11631-11650 | Msa1458510:CDS | 35.0% | |
| ! | GATCACCAAATTCTTGTTTG+TGG | - | tig0039661:11891-11910 | Msa1458510:intron | 35.0% |
| TTGTGTCCTTGATTTCATCA+GGG | + | tig0039661:12092-12111 | None:intergenic | 35.0% | |
| TTTGTGTCCTTGATTTCATC+AGG | + | tig0039661:12093-12112 | None:intergenic | 35.0% | |
| ! | GACACAAAGACCTTCAATTT+TGG | - | tig0039661:12105-12124 | Msa1458510:CDS | 35.0% |
| ! | AGAAGTTCTTCTACTGCTTT+TGG | - | tig0039661:12184-12203 | Msa1458510:CDS | 35.0% |
| !!! | TTGCATCCCAGTTTTTTCAA+TGG | - | tig0039661:12292-12311 | Msa1458510:intron | 35.0% |
| TGACATAAGTAGTTGTCTTG+AGG | + | tig0039661:12385-12404 | None:intergenic | 35.0% | |
| CAAGACAACTACTTATGTCA+CGG | - | tig0039661:12385-12404 | Msa1458510:intron | 35.0% | |
| AATGGCAATGAAAATCGCAA+AGG | + | tig0039661:12417-12436 | None:intergenic | 35.0% | |
| !!! | GCGATTTTCATTGCCATTTT+TGG | - | tig0039661:12419-12438 | Msa1458510:intron | 35.0% |
| ! | TGCAGGTAAGTGCTATTAAT+AGG | - | tig0039661:12474-12493 | Msa1458510:intron | 35.0% |
| ! | CGACATTTTCTATGGACAAT+TGG | - | tig0039661:12575-12594 | Msa1458510:CDS | 35.0% |
| !!! | TCAGTGGTTTTGGATTTTTG+GGG | + | tig0039661:12656-12675 | None:intergenic | 35.0% |
| !! | TAAGCAAAAATGGACTGCAA+TGG | + | tig0039661:12693-12712 | None:intergenic | 35.0% |
| ACTTGAAGCAAAGAATTCGA+AGG | - | tig0039661:12893-12912 | Msa1458510:CDS | 35.0% | |
| !! | TGTCTCTTCTGAGATCTTTA+GGG | + | tig0039661:12981-13000 | None:intergenic | 35.0% |
| !! | ATGTCTCTTCTGAGATCTTT+AGG | + | tig0039661:12982-13001 | None:intergenic | 35.0% |
| ! | GCATCCATTTTCTCAAACAT+TGG | + | tig0039661:13152-13171 | None:intergenic | 35.0% |
| !! | ATGAAAAGCATCTCATCAAC+TGG | + | tig0039661:13254-13273 | None:intergenic | 35.0% |
| ! | TCTACTGTTCTAGTTGAAGT+AGG | + | tig0039661:13416-13435 | None:intergenic | 35.0% |
| AGCAACAAACTTCAAGTCAT+CGG | + | tig0039661:13474-13493 | None:intergenic | 35.0% | |
| ATGCATATATTGTTGCACCA+AGG | + | tig0039661:13771-13790 | None:intergenic | 35.0% | |
| GTGCAACAATATATGCATCA+AGG | - | tig0039661:13773-13792 | Msa1458510:five_prime_UTR | 35.0% | |
| !! | TGTTTTTGAGCAGTGAAATC+AGG | + | tig0039661:13895-13914 | None:intergenic | 35.0% |
| AACAAGAATAGCTACCTCCT+TGG | - | tig0039661:10020-10039 | Msa1458510:CDS | 40.0% | |
| !! | CTCTGAAACCTGAAAGTACA+TGG | - | tig0039661:10187-10206 | Msa1458510:intron | 40.0% |
| CTACATGACCATGTACTTTC+AGG | + | tig0039661:10198-10217 | None:intergenic | 40.0% | |
| TTCCTACATATGTGGACATG+TGG | - | tig0039661:10318-10337 | Msa1458510:CDS | 40.0% | |
| AACCACATGTCCACATATGT+AGG | + | tig0039661:10323-10342 | None:intergenic | 40.0% | |
| TCATCCATTATGGTTGAGCT+TGG | - | tig0039661:10370-10389 | Msa1458510:CDS | 40.0% | |
| CAAACCAAGCTCAACCATAA+TGG | + | tig0039661:10377-10396 | None:intergenic | 40.0% | |
| !! | GTGGCTGTGTAATTGACTTT+TGG | - | tig0039661:10401-10420 | Msa1458510:CDS | 40.0% |
| TTGTGTTGTGTTGAGTACAG+TGG | - | tig0039661:10574-10593 | Msa1458510:CDS | 40.0% | |
| GGACTTAAATTTGTGAGGTG+AGG | - | tig0039661:10629-10648 | Msa1458510:CDS | 40.0% | |
| ! | GTCATTCCAGGTTTGATGAT+TGG | - | tig0039661:10755-10774 | Msa1458510:intron | 40.0% |
| TGATCTCCAATCATCAAACC+TGG | + | tig0039661:10764-10783 | None:intergenic | 40.0% | |
| ATTCAGAAGACCGTCTTCAA+TGG | - | tig0039661:10906-10925 | Msa1458510:CDS | 40.0% | |
| ATGGTTCACCCTGTAAATGA+AGG | - | tig0039661:10925-10944 | Msa1458510:CDS | 40.0% | |
| TGAAGGACAGACAAAGAAGT+TGG | - | tig0039661:10942-10961 | Msa1458510:CDS | 40.0% | |
| CGCAAAATTCTTGATCCACA+GGG | - | tig0039661:10976-10995 | Msa1458510:CDS | 40.0% | |
| GCAAAATTCTTGATCCACAG+GGG | - | tig0039661:10977-10996 | Msa1458510:CDS | 40.0% | |
| CTTTGTAATCACATGTGTGC+TGG | - | tig0039661:11026-11045 | Msa1458510:intron | 40.0% | |
| ! | AGAAGAAGGCGCAATAAATC+CGG | + | tig0039661:11205-11224 | None:intergenic | 40.0% |
| CTTCCAAAAACACGAGAAGA+AGG | + | tig0039661:11219-11238 | None:intergenic | 40.0% | |
| !!! | TCTTCTCGTGTTTTTGGAAG+AGG | - | tig0039661:11219-11238 | Msa1458510:intron | 40.0% |
| ATGTAAGATACCTGTGGAAG+TGG | + | tig0039661:11324-11343 | None:intergenic | 40.0% | |
| ACATGGATCCTTTACATCCA+TGG | + | tig0039661:11430-11449 | None:intergenic | 40.0% | |
| CATATTGACAGAGACAGCAT+GGG | - | tig0039661:11759-11778 | Msa1458510:CDS | 40.0% | |
| CACAGCCACAAACAAGAATT+TGG | + | tig0039661:11899-11918 | None:intergenic | 40.0% | |
| ! | CAAATTCTTGTTTGTGGCTG+TGG | - | tig0039661:11897-11916 | Msa1458510:intron | 40.0% |
| AGCTAACTGGTATCTGCTTT+CGG | - | tig0039661:11936-11955 | Msa1458510:intron | 40.0% | |
| ! | CATGATTCATTCTTGGGTTG+TGG | - | tig0039661:12012-12031 | Msa1458510:CDS | 40.0% |
| ! | GAACTTCTGAGGAAAATCTG+TGG | + | tig0039661:12172-12191 | None:intergenic | 40.0% |
| AAGCAGTAGAAGAACTTCTG+AGG | + | tig0039661:12183-12202 | None:intergenic | 40.0% | |
| !! | AGTTCTTCTACTGCTTTTGG+TGG | - | tig0039661:12187-12206 | Msa1458510:intron | 40.0% |
| !! | GTTCTTCTACTGCTTTTGGT+GGG | - | tig0039661:12188-12207 | Msa1458510:intron | 40.0% |
| !! | TTCTTCTACTGCTTTTGGTG+GGG | - | tig0039661:12189-12208 | Msa1458510:intron | 40.0% |
| ! | GGGTTTGCGAAATTTAAGGT+TGG | - | tig0039661:12209-12228 | Msa1458510:intron | 40.0% |
| ! | TAGTGTGGAATCAGTGGTTT+TGG | + | tig0039661:12666-12685 | None:intergenic | 40.0% |
| GGTGCCAATGTTTGAGAAAA+TGG | - | tig0039661:13145-13164 | Msa1458510:intron | 40.0% | |
| GAAAATGGATGCGCAATTGT+TGG | - | tig0039661:13160-13179 | Msa1458510:intron | 40.0% | |
| CTCTTCTCTGTATACAGAAC+TGG | + | tig0039661:13209-13228 | None:intergenic | 40.0% | |
| ! | GAGATGCTTTTCATTATGCG+AGG | - | tig0039661:13260-13279 | Msa1458510:intron | 40.0% |
| !! | TCTTCCACCATTTGTTGTCA+TGG | + | tig0039661:13297-13316 | None:intergenic | 40.0% |
| ! | ACAACAAATGGTGGAAGAAC+TGG | - | tig0039661:13299-13318 | Msa1458510:intron | 40.0% |
| ! | CTAATGCCTGGTGATTTTTG+TGG | - | tig0039661:13341-13360 | Msa1458510:intron | 40.0% |
| ! | TGGAGAGGAGCTTTTAACAT+GGG | - | tig0039661:13361-13380 | Msa1458510:intron | 40.0% |
| AGTTGAAGTAGGTAGATTCG+AGG | + | tig0039661:13405-13424 | None:intergenic | 40.0% | |
| ! | AGTTGAAGCATTTGCACTCA+AGG | - | tig0039661:13448-13467 | Msa1458510:intron | 40.0% |
| AACAACTCCAACACACTTTC+AGG | - | tig0039661:13522-13541 | Msa1458510:intron | 40.0% | |
| AGACAAGCTACAAGATGCTT+TGG | - | tig0039661:13720-13739 | Msa1458510:intron | 40.0% | |
| ACAAGATGCTTTGGCAAATG+AGG | - | tig0039661:13729-13748 | Msa1458510:five_prime_UTR | 40.0% | |
| GAAGGATCAACTATAAGCCT+TGG | - | tig0039661:13751-13770 | Msa1458510:five_prime_UTR | 40.0% | |
| AAAAGAGGTAGTAGTCTCTG+CGG | + | tig0039661:13853-13872 | None:intergenic | 40.0% | |
| AGTGGAAGGAAATTGAGGGA+GGG | + | tig0039661:9915-9934 | None:intergenic | 45.0% | |
| AAGTGGAAGGAAATTGAGGG+AGG | + | tig0039661:9916-9935 | None:intergenic | 45.0% | |
| ACAGGGTGAACCATTGAAGA+CGG | + | tig0039661:10919-10938 | None:intergenic | 45.0% | |
| GCGCAAAATTCTTGATCCAC+AGG | - | tig0039661:10975-10994 | Msa1458510:CDS | 45.0% | |
| ! | ATGTGTGCTGGCAATTTCTG+TGG | - | tig0039661:11038-11057 | Msa1458510:intron | 45.0% |
| CTTTACATCCATGGAGAGAG+CGG | + | tig0039661:11421-11440 | None:intergenic | 45.0% | |
| !!! | CTCGGGTCCATTTTTAGCAA+AGG | - | tig0039661:11648-11667 | Msa1458510:CDS | 45.0% |
| GCATATTGACAGAGACAGCA+TGG | - | tig0039661:11758-11777 | Msa1458510:CDS | 45.0% | |
| !! | CATGACTTGCTAGCATGTAG+AGG | + | tig0039661:11807-11826 | None:intergenic | 45.0% |
| TCTGCTTTCGGTAGAATCAC+AGG | - | tig0039661:11948-11967 | Msa1458510:intron | 45.0% | |
| TTTCGGTAGAATCACAGGTG+CGG | - | tig0039661:11953-11972 | Msa1458510:intron | 45.0% | |
| GGTTGACCCTGATGAAATCA+AGG | - | tig0039661:12083-12102 | Msa1458510:CDS | 45.0% | |
| CGATGCTCTACAATCACTTG+TGG | - | tig0039661:12137-12156 | Msa1458510:CDS | 45.0% | |
| GGTGGGGTTTGCGAAATTTA+AGG | - | tig0039661:12205-12224 | Msa1458510:intron | 45.0% | |
| GGAAGTTAGTGTGGAATCAG+TGG | + | tig0039661:12672-12691 | None:intergenic | 45.0% | |
| GACTGCAATGGAAGTTAGTG+TGG | + | tig0039661:12681-12700 | None:intergenic | 45.0% | |
| GGAATCTACAACTGTTAGGG+AGG | - | tig0039661:12807-12826 | Msa1458510:CDS | 45.0% | |
| AGGAAGAGATGAGAGTGAAG+AGG | - | tig0039661:12827-12846 | Msa1458510:CDS | 45.0% | |
| AAGAGATGAGAGTGAAGAGG+AGG | - | tig0039661:12830-12849 | Msa1458510:CDS | 45.0% | |
| AGAGATGAGAGTGAAGAGGA+GGG | - | tig0039661:12831-12850 | Msa1458510:CDS | 45.0% | |
| !! | CTCTTCTGAGATCTTTAGGG+AGG | + | tig0039661:12978-12997 | None:intergenic | 45.0% |
| GTCGCTACCATGACAACAAA+TGG | - | tig0039661:13287-13306 | Msa1458510:intron | 45.0% | |
| GCTACCATGACAACAAATGG+TGG | - | tig0039661:13290-13309 | Msa1458510:intron | 45.0% | |
| TCCTCTCCACAAAAATCACC+AGG | + | tig0039661:13350-13369 | None:intergenic | 45.0% | |
| ! | GTGGAGAGGAGCTTTTAACA+TGG | - | tig0039661:13360-13379 | Msa1458510:intron | 45.0% |
| ! | GGAGCTTTTAACATGGGCTT+TGG | - | tig0039661:13367-13386 | Msa1458510:intron | 45.0% |
| TGAAGTAGGTAGATTCGAGG+AGG | + | tig0039661:13402-13421 | None:intergenic | 45.0% | |
| ! | CTCCAACACACTTTCAGGTA+TGG | - | tig0039661:13527-13546 | Msa1458510:intron | 45.0% |
| ! | AGCCATACCTGAAAGTGTGT+TGG | + | tig0039661:13532-13551 | None:intergenic | 45.0% |
| CGTGTTTCATACAAGCAGCT+TGG | - | tig0039661:13650-13669 | Msa1458510:intron | 45.0% | |
| GATGCTTTGGCAAATGAGGA+AGG | - | tig0039661:13733-13752 | Msa1458510:five_prime_UTR | 45.0% | |
| !! | ATGGTTGAGCTTGGTTTGCG+TGG | - | tig0039661:10379-10398 | Msa1458510:CDS | 50.0% |
| AGGGGCCTATGCTTCAGAAA+TGG | - | tig0039661:10995-11014 | Msa1458510:CDS | 50.0% | |
| ! | GCGCCTTCTTCTCGTGTTTT+TGG | - | tig0039661:11213-11232 | Msa1458510:intron | 50.0% |
| CGCTCTCTCCATGGATGTAA+AGG | - | tig0039661:11419-11438 | Msa1458510:CDS | 50.0% | |
| !!! | GGACCCGAGCTTTTCAAGTT+TGG | + | tig0039661:11637-11656 | None:intergenic | 50.0% |
| GGACGAATTCGCAGTAGTCT+TGG | + | tig0039661:11709-11728 | None:intergenic | 50.0% | |
| GTTTGTGGCTGTGGCATATC+AGG | - | tig0039661:11906-11925 | Msa1458510:intron | 50.0% | |
| ATCAGGTGGTTGGAGCTAAC+TGG | - | tig0039661:11923-11942 | Msa1458510:intron | 50.0% | |
| TAGAATCACAGGTGCGGTGT+TGG | - | tig0039661:11959-11978 | Msa1458510:intron | 50.0% | |
| ! | GCCTGGTGATTTTTGTGGAG+AGG | - | tig0039661:13346-13365 | Msa1458510:intron | 50.0% |
| GGTAGATTCGAGGAGGAGTT+TGG | + | tig0039661:13395-13414 | None:intergenic | 50.0% | |
| GAAGGTCATATTCGCCGCAA+TGG | - | tig0039661:13614-13633 | Msa1458510:intron | 50.0% | |
| ATTCGCCGCAATGGAAGACA+TGG | - | tig0039661:13623-13642 | Msa1458510:intron | 50.0% | |
| TTCGCCGCAATGGAAGACAT+GGG | - | tig0039661:13624-13643 | Msa1458510:intron | 50.0% | |
| ! | AAATCAGGCTCAGCTGGCTT+TGG | + | tig0039661:13880-13899 | None:intergenic | 50.0% |
| !! | GTTGAGCTTGGTTTGCGTGG+TGG | - | tig0039661:10382-10401 | Msa1458510:CDS | 55.0% |
| !! | TTCTGAAGCATAGGCCCCTG+TGG | + | tig0039661:10994-11013 | None:intergenic | 55.0% |
| AGAGAGCGGCAAGGTTGTAG+AGG | + | tig0039661:11407-11426 | None:intergenic | 55.0% | |
| TTGACAGAGACAGCATGGGC+TGG | - | tig0039661:11763-11782 | Msa1458510:CDS | 55.0% | |
| TGTGGCTGTGGCATATCAGG+TGG | - | tig0039661:11909-11928 | Msa1458510:intron | 55.0% | |
| GCTGTGGCATATCAGGTGGT+TGG | - | tig0039661:11913-11932 | Msa1458510:intron | 55.0% | |
| AGAGGAGGGATGCAGAACGA+TGG | - | tig0039661:12845-12864 | Msa1458510:CDS | 55.0% | |
| TCGCCGCAATGGAAGACATG+GGG | - | tig0039661:13625-13644 | Msa1458510:intron | 55.0% | |
| GCACCCCATGTCTTCCATTG+CGG | + | tig0039661:13631-13650 | None:intergenic | 55.0% | |
| !! | GCTGGCTTTGGAGGCAAAAG+AGG | + | tig0039661:13868-13887 | None:intergenic | 55.0% |
| GCAGTGAAATCAGGCTCAGC+TGG | + | tig0039661:13886-13905 | None:intergenic | 55.0% | |
| CAACCTTGCCGCTCTCTCCA+TGG | - | tig0039661:11410-11429 | Msa1458510:CDS | 60.0% | |
| CATCCATGGAGAGAGCGGCA+AGG | + | tig0039661:11416-11435 | None:intergenic | 60.0% | |
| !! | TCAGGCTCAGCTGGCTTTGG+AGG | + | tig0039661:13877-13896 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0039661 | gene | 9708 | 14110 | 9708 | ID=Msa1458510;Name=Msa1458510 |
| tig0039661 | mRNA | 9708 | 14110 | 9708 | ID=Msa1458510-mRNA-1;Parent=Msa1458510;Name=Msa1458510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=440|0.88|0.8|1|0.77|0.8|10|192|713 |
| tig0039661 | exon | 9708 | 10200 | 9708 | ID=Msa1458510-mRNA-1:exon:21789;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 10275 | 10452 | 10275 | ID=Msa1458510-mRNA-1:exon:21788;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 10468 | 10672 | 10468 | ID=Msa1458510-mRNA-1:exon:21787;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 10783 | 11019 | 10783 | ID=Msa1458510-mRNA-1:exon:21786;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 11340 | 11451 | 11340 | ID=Msa1458510-mRNA-1:exon:21785;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 11592 | 11890 | 11592 | ID=Msa1458510-mRNA-1:exon:21784;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 11993 | 12205 | 11993 | ID=Msa1458510-mRNA-1:exon:21783;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 12486 | 13053 | 12486 | ID=Msa1458510-mRNA-1:exon:21782;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 13173 | 13258 | 13173 | ID=Msa1458510-mRNA-1:exon:21781;Parent=Msa1458510-mRNA-1 |
| tig0039661 | exon | 13728 | 14110 | 13728 | ID=Msa1458510-mRNA-1:exon:21780;Parent=Msa1458510-mRNA-1 |
| tig0039661 | five_prime_UTR | 13728 | 14110 | 13728 | ID=Msa1458510-mRNA-1:five_prime_utr;Parent=Msa1458510-mRNA-1 |
| tig0039661 | five_prime_UTR | 13202 | 13258 | 13202 | ID=Msa1458510-mRNA-1:five_prime_utr;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 13173 | 13201 | 13173 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 12486 | 13053 | 12486 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 11993 | 12205 | 11993 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 11592 | 11890 | 11592 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 11340 | 11451 | 11340 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 10783 | 11019 | 10783 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 10468 | 10672 | 10468 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 10275 | 10452 | 10275 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | CDS | 9900 | 10200 | 9900 | ID=Msa1458510-mRNA-1:cds;Parent=Msa1458510-mRNA-1 |
| tig0039661 | three_prime_UTR | 9708 | 9899 | 9708 | ID=Msa1458510-mRNA-1:three_prime_utr;Parent=Msa1458510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
