Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201200 | XP_003629211.1 | 95.214 | 397 | 19 | 0 | 1 | 397 | 1 | 397 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201200 | sp|Q3EBZ2|SKI23_ARATH | 30.370 | 405 | 235 | 13 | 23 | 395 | 1 | 390 | 3.28e-41 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007280 | Msa1201200 | 0.807775 | 4.286996e-50 | -8.615850e-47 |
| Msa0010890 | Msa1201200 | 0.806411 | 8.335296e-50 | -8.615850e-47 |
| Msa0038720 | Msa1201200 | 0.822773 | 1.980038e-53 | -8.615850e-47 |
| Msa0046380 | Msa1201200 | 0.813854 | 2.072989e-51 | -8.615850e-47 |
| Msa0058600 | Msa1201200 | 0.801673 | 8.058265e-49 | -8.615850e-47 |
| Msa0085280 | Msa1201200 | 0.814215 | 1.725900e-51 | -8.615850e-47 |
| Msa0085290 | Msa1201200 | 0.826197 | 3.095557e-54 | -8.615850e-47 |
| Msa0086590 | Msa1201200 | 0.816853 | 4.463137e-52 | -8.615850e-47 |
| Msa0092910 | Msa1201200 | 0.837247 | 5.817696e-57 | -8.615850e-47 |
| Msa0100090 | Msa1201200 | 0.806636 | 7.472803e-50 | -8.615850e-47 |
| Msa0607180 | Msa1201200 | 0.817864 | 2.642789e-52 | -8.615850e-47 |
| Msa0622170 | Msa1201200 | -0.826360 | 2.831808e-54 | -8.615850e-47 |
| Msa0625190 | Msa1201200 | 0.823668 | 1.223672e-53 | -8.615850e-47 |
| Msa0647360 | Msa1201200 | 0.816473 | 5.431867e-52 | -8.615850e-47 |
| Msa0647830 | Msa1201200 | 0.800093 | 1.694007e-48 | -8.615850e-47 |
| Msa0648860 | Msa1201200 | 0.816003 | 6.917372e-52 | -8.615850e-47 |
| Msa0708310 | Msa1201200 | 0.810353 | 1.202645e-50 | -8.615850e-47 |
| Msa0731180 | Msa1201200 | 0.803000 | 4.294581e-49 | -8.615850e-47 |
| Msa0735810 | Msa1201200 | 0.804130 | 2.504385e-49 | -8.615850e-47 |
| Msa0745070 | Msa1201200 | 0.827658 | 1.385362e-54 | -8.615850e-47 |
| Msa0756320 | Msa1201200 | 0.801434 | 9.021945e-49 | -8.615850e-47 |
| Msa0760440 | Msa1201200 | 0.801914 | 7.192215e-49 | -8.615850e-47 |
| Msa0762850 | Msa1201200 | 0.800932 | 1.142693e-48 | -8.615850e-47 |
| Msa0766630 | Msa1201200 | 0.810520 | 1.106661e-50 | -8.615850e-47 |
| Msa0780350 | Msa1201200 | 0.805030 | 1.624770e-49 | -8.615850e-47 |
| Msa0790550 | Msa1201200 | 0.802926 | 4.448121e-49 | -8.615850e-47 |
| Msa0790680 | Msa1201200 | 0.805605 | 1.231384e-49 | -8.615850e-47 |
| Msa0801780 | Msa1201200 | 0.827719 | 1.339745e-54 | -8.615850e-47 |
| Msa0825870 | Msa1201200 | 0.825886 | 3.671380e-54 | -8.615850e-47 |
| Msa0828660 | Msa1201200 | 0.801910 | 7.204987e-49 | -8.615850e-47 |
| Msa0840330 | Msa1201200 | 0.815723 | 7.988322e-52 | -8.615850e-47 |
| Msa0131410 | Msa1201200 | 0.811454 | 6.944801e-51 | -8.615850e-47 |
| Msa0131420 | Msa1201200 | 0.838466 | 2.828889e-57 | -8.615850e-47 |
| Msa0141250 | Msa1201200 | 0.809245 | 2.081698e-50 | -8.615850e-47 |
| Msa0153450 | Msa1201200 | 0.815137 | 1.078326e-51 | -8.615850e-47 |
| Msa0187830 | Msa1201200 | 0.815426 | 9.299875e-52 | -8.615850e-47 |
| Msa0200850 | Msa1201200 | 0.822404 | 2.412593e-53 | -8.615850e-47 |
| Msa0229590 | Msa1201200 | 0.831503 | 1.609045e-55 | -8.615850e-47 |
| Msa0229710 | Msa1201200 | 0.815832 | 7.553445e-52 | -8.615850e-47 |
| Msa0365780 | Msa1201200 | 0.811068 | 8.421341e-51 | -8.615850e-47 |
| Msa0377800 | Msa1201200 | 0.823177 | 1.593800e-53 | -8.615850e-47 |
| Msa0387660 | Msa1201200 | 0.841143 | 5.680623e-58 | -8.615850e-47 |
| Msa0387690 | Msa1201200 | 0.846618 | 1.939526e-59 | -8.615850e-47 |
| Msa0402180 | Msa1201200 | 0.810907 | 9.124522e-51 | -8.615850e-47 |
| Msa0419670 | Msa1201200 | 0.823448 | 1.377778e-53 | -8.615850e-47 |
| Msa0426600 | Msa1201200 | 0.827170 | 1.814206e-54 | -8.615850e-47 |
| Msa0431440 | Msa1201200 | 0.842108 | 3.162184e-58 | -8.615850e-47 |
| Msa0445280 | Msa1201200 | 0.820603 | 6.287848e-53 | -8.615850e-47 |
| Msa0455760 | Msa1201200 | 0.804354 | 2.248521e-49 | -8.615850e-47 |
| Msa0459560 | Msa1201200 | 0.813440 | 2.556741e-51 | -8.615850e-47 |
| Msa0464710 | Msa1201200 | 0.815240 | 1.023108e-51 | -8.615850e-47 |
| Msa0476330 | Msa1201200 | 0.852284 | 5.107456e-61 | -8.615850e-47 |
| Msa0998460 | Msa1201200 | 0.806817 | 6.840280e-50 | -8.615850e-47 |
| Msa1039710 | Msa1201200 | -0.812972 | 3.239868e-51 | -8.615850e-47 |
| Msa1089940 | Msa1201200 | 0.806091 | 9.734352e-50 | -8.615850e-47 |
| Msa1100930 | Msa1201200 | 0.821151 | 4.703561e-53 | -8.615850e-47 |
| Msa0243480 | Msa1201200 | 0.817804 | 2.726635e-52 | -8.615850e-47 |
| Msa0244190 | Msa1201200 | 0.810366 | 1.194550e-50 | -8.615850e-47 |
| Msa0264830 | Msa1201200 | 0.814390 | 1.578878e-51 | -8.615850e-47 |
| Msa0269810 | Msa1201200 | 0.806532 | 7.857311e-50 | -8.615850e-47 |
| Msa0270060 | Msa1201200 | 0.810675 | 1.024495e-50 | -8.615850e-47 |
| Msa0281930 | Msa1201200 | 0.827557 | 1.464714e-54 | -8.615850e-47 |
| Msa0283910 | Msa1201200 | 0.800828 | 1.199852e-48 | -8.615850e-47 |
| Msa0302870 | Msa1201200 | 0.800610 | 1.329630e-48 | -8.615850e-47 |
| Msa0308460 | Msa1201200 | 0.822926 | 1.823412e-53 | -8.615850e-47 |
| Msa0314070 | Msa1201200 | 0.804770 | 1.841631e-49 | -8.615850e-47 |
| Msa0321080 | Msa1201200 | 0.840559 | 8.084675e-58 | -8.615850e-47 |
| Msa0340340 | Msa1201200 | 0.813288 | 2.761655e-51 | -8.615850e-47 |
| Msa0340450 | Msa1201200 | 0.819654 | 1.036838e-52 | -8.615850e-47 |
| Msa0357830 | Msa1201200 | 0.809191 | 2.137557e-50 | -8.615850e-47 |
| Msa0357840 | Msa1201200 | 0.806642 | 7.451045e-50 | -8.615850e-47 |
| Msa0361670 | Msa1201200 | 0.803446 | 3.471916e-49 | -8.615850e-47 |
| Msa1130390 | Msa1201200 | 0.805527 | 1.278723e-49 | -8.615850e-47 |
| Msa1179120 | Msa1201200 | 0.806145 | 9.482729e-50 | -8.615850e-47 |
| Msa1185110 | Msa1201200 | 0.810523 | 1.105045e-50 | -8.615850e-47 |
| Msa1201200 | Msa1201230 | 0.949322 | 1.610115e-107 | -8.615850e-47 |
| Msa1201200 | Msa1236730 | 0.847629 | 1.024492e-59 | -8.615850e-47 |
| Msa1201200 | Msa1238330 | 0.842217 | 2.958804e-58 | -8.615850e-47 |
| Msa1201200 | Msa1246700 | 0.820095 | 8.220956e-53 | -8.615850e-47 |
| Msa1201200 | Msa1249490 | 0.811488 | 6.826631e-51 | -8.615850e-47 |
| Msa1201200 | Msa1252960 | 0.948060 | 1.992103e-106 | -8.615850e-47 |
| Msa1201200 | Msa1255060 | 0.816890 | 4.379685e-52 | -8.615850e-47 |
| Msa1201200 | Msa1256410 | 0.818105 | 2.331690e-52 | -8.615850e-47 |
| Msa1201200 | Msa1269660 | 0.829459 | 5.086615e-55 | -8.615850e-47 |
| Msa1201200 | Msa1278660 | 0.817169 | 3.789812e-52 | -8.615850e-47 |
| Msa1201200 | Msa1295510 | 0.803118 | 4.061161e-49 | -8.615850e-47 |
| Msa1201200 | Msa1304890 | -0.837214 | 5.932548e-57 | -8.615850e-47 |
| Msa1201200 | Msa1311340 | 0.811546 | 6.632842e-51 | -8.615850e-47 |
| Msa1201200 | Msa1317130 | 0.839175 | 1.854225e-57 | -8.615850e-47 |
| Msa1201200 | Msa1318050 | 0.813407 | 2.600238e-51 | -8.615850e-47 |
| Msa1201200 | Msa1328940 | 0.843607 | 1.262918e-58 | -8.615850e-47 |
| Msa1201200 | Msa1365270 | 0.820393 | 7.022655e-53 | -8.615850e-47 |
| Msa1201200 | Msa1375030 | 0.809780 | 1.597413e-50 | -8.615850e-47 |
| Msa1201200 | Msa1376450 | 0.800039 | 1.737458e-48 | -8.615850e-47 |
| Msa1201200 | Msa1378040 | 0.804103 | 2.536090e-49 | -8.615850e-47 |
| Msa1201200 | Msa1381960 | 0.803270 | 3.776162e-49 | -8.615850e-47 |
| Msa1201200 | Msa1383100 | 0.817462 | 3.257208e-52 | -8.615850e-47 |
| Msa1201200 | Msa1408340 | 0.801130 | 1.040938e-48 | -8.615850e-47 |
| Msa1201200 | Msa1414520 | 0.801935 | 7.120914e-49 | -8.615850e-47 |
| Msa1201200 | Msa1424630 | 0.813946 | 1.977999e-51 | -8.615850e-47 |
| Msa1201200 | Msa1453320 | 0.855216 | 7.318889e-62 | -8.615850e-47 |
| Msa1201200 | Msa1458510 | 0.852978 | 3.236150e-61 | -8.615850e-47 |
| Msa0483800 | Msa1201200 | 0.802727 | 4.890166e-49 | -8.615850e-47 |
| Msa0492710 | Msa1201200 | 0.804736 | 1.871724e-49 | -8.615850e-47 |
| Msa0506300 | Msa1201200 | 0.823613 | 1.260622e-53 | -8.615850e-47 |
| Msa0517570 | Msa1201200 | 0.816788 | 4.616729e-52 | -8.615850e-47 |
| Msa0520330 | Msa1201200 | 0.848457 | 6.054507e-60 | -8.615850e-47 |
| Msa0526070 | Msa1201200 | -0.827021 | 1.969017e-54 | -8.615850e-47 |
| Msa0559190 | Msa1201200 | 0.802808 | 4.705628e-49 | -8.615850e-47 |
| Msa0574570 | Msa1201200 | 0.843686 | 1.202673e-58 | -8.615850e-47 |
| Msa0574580 | Msa1201200 | 0.818688 | 1.720105e-52 | -8.615850e-47 |
| Msa0588870 | Msa1201200 | 0.814848 | 1.249761e-51 | -8.615850e-47 |
| Msa0842650 | Msa1201200 | 0.806461 | 8.135153e-50 | -8.615850e-47 |
| Msa0870060 | Msa1201200 | 0.840847 | 6.796334e-58 | -8.615850e-47 |
| Msa0870830 | Msa1201200 | 0.845049 | 5.173223e-59 | -8.615850e-47 |
| Msa0875050 | Msa1201200 | 0.802562 | 5.288445e-49 | -8.615850e-47 |
| Msa0886330 | Msa1201200 | -0.801989 | 6.939521e-49 | -8.615850e-47 |
| Msa0898910 | Msa1201200 | 0.809376 | 1.951012e-50 | -8.615850e-47 |
| Msa0903370 | Msa1201200 | 0.818919 | 1.524287e-52 | -8.615850e-47 |
| Msa0903990 | Msa1201200 | 0.818272 | 2.137939e-52 | -8.615850e-47 |
| Msa0936530 | Msa1201200 | 0.881070 | 3.258217e-70 | -8.615850e-47 |
| Msa0936550 | Msa1201200 | 0.843513 | 1.337632e-58 | -8.615850e-47 |
| Msa0939250 | Msa1201200 | 0.814215 | 1.725632e-51 | -8.615850e-47 |
| Msa0952360 | Msa1201200 | 0.809875 | 1.524087e-50 | -8.615850e-47 |
| Msa0957830 | Msa1201200 | 0.803896 | 2.800799e-49 | -8.615850e-47 |
| Msa0961490 | Msa1201200 | 0.806199 | 9.239277e-50 | -8.615850e-47 |
| Msa0972770 | Msa1201200 | 0.846461 | 2.141202e-59 | -8.615850e-47 |
| Msa0973520 | Msa1201200 | 0.865493 | 5.673824e-65 | -8.615850e-47 |
| Msa0973600 | Msa1201200 | 0.811608 | 6.429807e-51 | -8.615850e-47 |
| Msa0977200 | Msa1201200 | 0.801861 | 7.374984e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201200 | MtrunA17_Chr8g0371031 | 95.214 | 397 | 19 | 0 | 1 | 397 | 1 | 397 | 0.0 | 763 |
| Msa1201200 | MtrunA17_Chr2g0300541 | 77.000 | 400 | 81 | 5 | 1 | 397 | 1 | 392 | 0.0 | 595 |
| Msa1201200 | MtrunA17_Chr8g0371101 | 74.142 | 379 | 95 | 3 | 20 | 397 | 1 | 377 | 0.0 | 578 |
| Msa1201200 | MtrunA17_Chr8g0378641 | 33.162 | 389 | 212 | 12 | 21 | 383 | 9 | 375 | 1.93e-50 | 174 |
| Msa1201200 | MtrunA17_Chr6g0488491 | 33.600 | 375 | 202 | 10 | 21 | 383 | 4 | 343 | 1.98e-49 | 171 |
| Msa1201200 | MtrunA17_Chr5g0435201 | 32.481 | 391 | 200 | 10 | 20 | 383 | 1 | 354 | 8.54e-49 | 169 |
| Msa1201200 | MtrunA17_Chr7g0261121 | 36.022 | 372 | 177 | 17 | 20 | 359 | 6 | 348 | 2.59e-46 | 163 |
| Msa1201200 | MtrunA17_Chr3g0088831 | 31.395 | 430 | 226 | 15 | 16 | 395 | 10 | 420 | 2.54e-44 | 159 |
| Msa1201200 | MtrunA17_Chr2g0303111 | 29.897 | 388 | 239 | 12 | 20 | 395 | 1 | 367 | 2.46e-33 | 128 |
| Msa1201200 | MtrunA17_Chr4g0047461 | 35.798 | 257 | 130 | 8 | 149 | 383 | 3 | 246 | 2.74e-33 | 125 |
| Msa1201200 | MtrunA17_Chr3g0088751 | 28.293 | 410 | 216 | 16 | 24 | 395 | 4 | 373 | 8.58e-31 | 121 |
| Msa1201200 | MtrunA17_Chr6g0457531 | 29.609 | 358 | 194 | 14 | 23 | 359 | 3 | 323 | 1.36e-30 | 120 |
| Msa1201200 | MtrunA17_Chr1g0157711 | 29.280 | 403 | 218 | 16 | 20 | 395 | 1 | 363 | 1.04e-29 | 118 |
| Msa1201200 | MtrunA17_Chr1g0151721 | 26.196 | 397 | 214 | 10 | 16 | 395 | 13 | 347 | 1.29e-29 | 117 |
| Msa1201200 | MtrunA17_Chr6g0460451 | 28.362 | 409 | 223 | 16 | 24 | 397 | 4 | 377 | 1.40e-29 | 118 |
| Msa1201200 | MtrunA17_Chr1g0146401 | 28.760 | 379 | 211 | 13 | 24 | 375 | 21 | 367 | 4.30e-29 | 116 |
| Msa1201200 | MtrunA17_Chr3g0088931 | 28.982 | 383 | 210 | 16 | 20 | 380 | 1 | 343 | 7.85e-29 | 115 |
| Msa1201200 | MtrunA17_Chr6g0460421 | 27.792 | 403 | 233 | 17 | 24 | 397 | 4 | 377 | 8.77e-28 | 113 |
| Msa1201200 | MtrunA17_Chr1g0170781 | 26.139 | 417 | 235 | 17 | 19 | 395 | 13 | 396 | 1.98e-25 | 106 |
| Msa1201200 | MtrunA17_Chr6g0457501 | 27.078 | 373 | 216 | 13 | 24 | 374 | 4 | 342 | 3.06e-25 | 106 |
| Msa1201200 | MtrunA17_Chr3g0088621 | 23.810 | 399 | 246 | 13 | 10 | 376 | 4 | 376 | 6.92e-25 | 105 |
| Msa1201200 | MtrunA17_Chr3g0088551 | 25.063 | 399 | 231 | 14 | 24 | 376 | 4 | 380 | 8.30e-25 | 104 |
| Msa1201200 | MtrunA17_Chr3g0088531 | 27.487 | 382 | 220 | 14 | 23 | 381 | 1 | 348 | 1.44e-24 | 103 |
| Msa1201200 | MtrunA17_Chr3g0088841 | 27.684 | 354 | 205 | 12 | 25 | 361 | 7 | 326 | 1.69e-24 | 103 |
| Msa1201200 | MtrunA17_Chr3g0088951 | 27.005 | 374 | 218 | 12 | 24 | 379 | 4 | 340 | 2.22e-24 | 103 |
| Msa1201200 | MtrunA17_Chr3g0088541 | 27.154 | 383 | 208 | 16 | 24 | 381 | 3 | 339 | 1.86e-23 | 100 |
| Msa1201200 | MtrunA17_Chr3g0143621 | 28.011 | 357 | 220 | 12 | 24 | 363 | 22 | 358 | 4.27e-23 | 100 |
| Msa1201200 | MtrunA17_Chr3g0089001 | 26.357 | 387 | 221 | 15 | 14 | 379 | 25 | 368 | 7.67e-23 | 99.0 |
| Msa1201200 | MtrunA17_Chr3g0088921 | 27.119 | 413 | 219 | 17 | 20 | 382 | 1 | 381 | 5.73e-22 | 96.7 |
| Msa1201200 | MtrunA17_Chr3g0127311 | 27.901 | 362 | 208 | 14 | 24 | 359 | 6 | 340 | 8.25e-22 | 96.7 |
| Msa1201200 | MtrunA17_Chr6g0457541 | 26.536 | 358 | 202 | 10 | 22 | 357 | 2 | 320 | 2.20e-21 | 94.7 |
| Msa1201200 | MtrunA17_Chr3g0088721 | 28.392 | 398 | 217 | 15 | 24 | 394 | 8 | 364 | 4.43e-21 | 94.0 |
| Msa1201200 | MtrunA17_Chr3g0088671 | 26.136 | 352 | 208 | 14 | 25 | 361 | 5 | 319 | 4.58e-21 | 93.6 |
| Msa1201200 | MtrunA17_Chr3g0088601 | 27.317 | 410 | 222 | 15 | 16 | 382 | 9 | 385 | 4.88e-21 | 94.0 |
| Msa1201200 | MtrunA17_Chr3g0143611 | 25.263 | 380 | 220 | 15 | 24 | 382 | 3 | 339 | 9.11e-21 | 92.8 |
| Msa1201200 | MtrunA17_Chr3g0127321 | 25.647 | 425 | 229 | 19 | 4 | 381 | 16 | 400 | 1.38e-20 | 93.2 |
| Msa1201200 | MtrunA17_Chr3g0088741 | 27.568 | 370 | 189 | 16 | 25 | 365 | 5 | 324 | 9.31e-20 | 90.1 |
| Msa1201200 | MtrunA17_Chr3g0089041 | 26.471 | 408 | 226 | 19 | 24 | 395 | 3 | 372 | 3.94e-19 | 88.2 |
| Msa1201200 | MtrunA17_Chr3g0088631 | 25.263 | 380 | 220 | 12 | 24 | 370 | 4 | 352 | 7.47e-19 | 87.4 |
| Msa1201200 | MtrunA17_Chr3g0096401 | 27.926 | 376 | 220 | 14 | 25 | 395 | 30 | 359 | 8.05e-17 | 81.3 |
| Msa1201200 | MtrunA17_Chr3g0088561 | 30.168 | 179 | 103 | 4 | 228 | 395 | 5 | 172 | 4.63e-15 | 72.8 |
| Msa1201200 | MtrunA17_Chr3g0092331 | 33.526 | 173 | 77 | 5 | 228 | 376 | 3 | 161 | 1.68e-14 | 71.6 |
| Msa1201200 | MtrunA17_Chr3g0088711 | 30.058 | 173 | 85 | 5 | 218 | 387 | 22 | 161 | 1.94e-14 | 71.2 |
| Msa1201200 | MtrunA17_Chr1g0151701 | 29.630 | 189 | 103 | 6 | 225 | 395 | 2 | 178 | 1.28e-12 | 66.2 |
| Msa1201200 | MtrunA17_Chr3g0088581 | 26.036 | 169 | 113 | 4 | 215 | 376 | 27 | 190 | 9.55e-12 | 63.9 |
| Msa1201200 | MtrunA17_Chr5g0417881 | 32.895 | 152 | 88 | 5 | 210 | 359 | 13 | 152 | 3.49e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201200 | AT2G17030.1 | 30.370 | 405 | 235 | 13 | 23 | 395 | 1 | 390 | 3.34e-42 | 153 |
| Msa1201200 | AT2G17036.1 | 28.010 | 407 | 236 | 15 | 23 | 395 | 1 | 384 | 3.92e-36 | 136 |
| Msa1201200 | AT2G17036.2 | 28.079 | 406 | 235 | 15 | 24 | 395 | 1 | 383 | 6.21e-36 | 136 |
| Msa1201200 | AT1G65770.1 | 29.041 | 365 | 213 | 11 | 23 | 372 | 1 | 334 | 6.65e-35 | 132 |
| Msa1201200 | AT4G35733.1 | 29.563 | 389 | 211 | 16 | 20 | 384 | 1 | 350 | 4.98e-33 | 127 |
| Msa1201200 | AT2G26160.1 | 29.714 | 350 | 199 | 13 | 25 | 361 | 5 | 320 | 5.50e-29 | 115 |
| Msa1201200 | AT1G44080.1 | 27.989 | 368 | 212 | 13 | 24 | 381 | 4 | 328 | 5.90e-28 | 113 |
| Msa1201200 | AT3G25750.2 | 27.419 | 372 | 221 | 11 | 22 | 376 | 2 | 341 | 8.14e-27 | 110 |
| Msa1201200 | AT2G17690.1 | 28.673 | 422 | 216 | 15 | 25 | 379 | 3 | 406 | 2.53e-25 | 107 |
| Msa1201200 | AT3G25750.1 | 27.027 | 370 | 211 | 11 | 22 | 376 | 2 | 327 | 4.89e-25 | 105 |
| Msa1201200 | AT5G60060.1 | 29.683 | 347 | 196 | 16 | 26 | 351 | 11 | 330 | 2.43e-23 | 100 |
| Msa1201200 | AT1G65740.1 | 27.660 | 376 | 216 | 14 | 23 | 372 | 1 | 346 | 8.69e-23 | 99.0 |
| Msa1201200 | AT1G65760.1 | 27.869 | 366 | 212 | 14 | 25 | 372 | 5 | 336 | 3.09e-22 | 97.4 |
| Msa1201200 | AT2G16290.1 | 26.733 | 404 | 233 | 17 | 23 | 383 | 1 | 384 | 4.28e-20 | 92.0 |
| Msa1201200 | AT5G24040.1 | 23.797 | 374 | 206 | 14 | 23 | 363 | 1 | 328 | 1.66e-14 | 74.7 |
| Msa1201200 | AT1G64840.1 | 24.370 | 357 | 217 | 13 | 25 | 361 | 4 | 327 | 3.05e-12 | 68.2 |
| Msa1201200 | AT2G16300.1 | 23.780 | 328 | 204 | 13 | 23 | 322 | 1 | 310 | 9.64e-11 | 63.2 |
Find 72 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTTCGTATGTATAATT+TGG | 0.212475 | 8_1:-54391782 | Msa1201200:CDS |
| TCACCTCCTTTGTGTGGATT+TGG | 0.230521 | 8_1:-54392090 | Msa1201200:CDS |
| AAGGGAACTGCATCTACTTT+AGG | 0.247416 | 8_1:-54391813 | Msa1201200:CDS |
| ATCTTTCAAGAGGGTAAATT+AGG | 0.254641 | 8_1:-54392267 | Msa1201200:CDS |
| GTCTCAACTAAAGACTTAAT+TGG | 0.265830 | 8_1:-54391841 | Msa1201200:CDS |
| TGGATGAAGAATGGGGAAAA+TGG | 0.270862 | 8_1:-54391924 | Msa1201200:CDS |
| TTCCAAAGGTTGGCTGATTA+AGG | 0.291497 | 8_1:-54392532 | Msa1201200:CDS |
| AATGGAAAAGAAGGAGAGTT+TGG | 0.332443 | 8_1:+54392675 | None:intergenic |
| AGGTGCTAAAGGTTCTAAAT+TGG | 0.350268 | 8_1:+54392560 | None:intergenic |
| TATGGAACTTGTTGGATCAT+AGG | 0.360148 | 8_1:-54392413 | Msa1201200:CDS |
| ATAGGACTCAACAAACTTAC+AGG | 0.370665 | 8_1:+54392489 | None:intergenic |
| ATAAATGGGGAACTATTTCA+TGG | 0.373052 | 8_1:-54392146 | Msa1201200:CDS |
| AGGGAACTGCATCTACTTTA+GGG | 0.379511 | 8_1:-54391812 | Msa1201200:CDS |
| GAAGGAGAGTTTGGATGAGA+TGG | 0.382409 | 8_1:+54392684 | None:intergenic |
| CTCAACTTCCTATAGAACTA+TGG | 0.385206 | 8_1:-54392791 | Msa1201200:CDS |
| CAATGATATAAACGGTTGAT+TGG | 0.387856 | 8_1:+54392607 | None:intergenic |
| ACACTAGTCCAAGGAGAGTT+AGG | 0.390020 | 8_1:+54392312 | None:intergenic |
| TTATAAGTTGGATGAAGAAT+GGG | 0.394790 | 8_1:-54391932 | Msa1201200:CDS |
| TACCTTAATCAGCCAACCTT+TGG | 0.397147 | 8_1:+54392530 | None:intergenic |
| TTTATAAGTTGGATGAAGAA+TGG | 0.397683 | 8_1:-54391933 | Msa1201200:CDS |
| CACCTTCTTCTTCCAAAGGT+TGG | 0.399560 | 8_1:-54392542 | Msa1201200:CDS |
| AAAGACTTAATTGGATATCA+AGG | 0.406036 | 8_1:-54391832 | Msa1201200:CDS |
| GGATGATCATAGAATCACTA+TGG | 0.406868 | 8_1:-54391761 | Msa1201200:CDS |
| TGGAAACAAGAAGCATTTGA+TGG | 0.415140 | 8_1:-54392070 | Msa1201200:CDS |
| TGTTCTATCCTAACTCTCCT+TGG | 0.421475 | 8_1:-54392320 | Msa1201200:CDS |
| ATCTTAGGCCATAGTTCTAT+AGG | 0.430698 | 8_1:+54392783 | None:intergenic |
| AGTTGGTTCAATGATATAAA+CGG | 0.439030 | 8_1:+54392599 | None:intergenic |
| TACCATGCTATGGAACTTGT+TGG | 0.443560 | 8_1:-54392421 | Msa1201200:CDS |
| ATCTGATTCTTCTTCATCCA+TGG | 0.450631 | 8_1:-54392832 | Msa1201200:CDS |
| TGACGATGTTATTGTGTTCA+AGG | 0.452162 | 8_1:-54392187 | Msa1201200:CDS |
| ATAGAACTATGGCCTAAGAT+AGG | 0.452927 | 8_1:-54392780 | Msa1201200:CDS |
| TTGTTTAGCGAGTCGTAGAC+AGG | 0.454181 | 8_1:+54392639 | None:intergenic |
| CTTGTATTGACAAGACTTTG+TGG | 0.456773 | 8_1:-54391726 | Msa1201200:CDS |
| ATGTTTCAAAGTTTATAAGT+TGG | 0.473392 | 8_1:-54391944 | Msa1201200:CDS |
| GGATGAAGAATGGGGAAAAT+GGG | 0.473828 | 8_1:-54391923 | Msa1201200:CDS |
| GGAGAGTTTGGATGAGATGG+AGG | 0.480906 | 8_1:+54392687 | None:intergenic |
| CTTTGTGGTCTCGTTCACCT+TGG | 0.488154 | 8_1:-54391711 | Msa1201200:CDS |
| ATGGAACTTGTTGGATCATA+GGG | 0.493145 | 8_1:-54392412 | Msa1201200:CDS |
| CTGTGAAAGTAGTGAAGACA+TGG | 0.493157 | 8_1:-54392013 | Msa1201200:CDS |
| TTGGAAGAAGAAGGTGCTAA+AGG | 0.501406 | 8_1:+54392549 | None:intergenic |
| ACAGGGTGAGGTATTTGTAA+TGG | 0.505888 | 8_1:+54392657 | None:intergenic |
| CACAAAGTCTTGTCAATACA+AGG | 0.513043 | 8_1:+54391727 | None:intergenic |
| GGTATTTGTAATGGAAAAGA+AGG | 0.516150 | 8_1:+54392666 | None:intergenic |
| TAAAGGTTCTAAATTGGAGT+TGG | 0.521984 | 8_1:+54392566 | None:intergenic |
| GAAGTGTTGTTACTGCTAAG+AGG | 0.538395 | 8_1:+54392444 | None:intergenic |
| CAATTCTCACCTCCTTTGTG+TGG | 0.538436 | 8_1:-54392096 | Msa1201200:CDS |
| GTTTGGATGAGATGGAGGAA+TGG | 0.540037 | 8_1:+54392692 | None:intergenic |
| CTCTCCTTGGACTAGTGTTG+AGG | 0.545956 | 8_1:-54392307 | Msa1201200:CDS |
| CCAATCAACTATCTCATCCA+TGG | 0.548037 | 8_1:+54392815 | None:intergenic |
| CCATGGATGAGATAGTTGAT+TGG | 0.548664 | 8_1:-54392815 | Msa1201200:CDS |
| ACAACACTTCTACCATGCTA+TGG | 0.549319 | 8_1:-54392431 | Msa1201200:CDS |
| TTAGCACCTTCTTCTTCCAA+AGG | 0.559083 | 8_1:-54392546 | Msa1201200:CDS |
| AGCCAACCTTTGGAAGAAGA+AGG | 0.565959 | 8_1:+54392540 | None:intergenic |
| ATCCAACAAGTTCCATAGCA+TGG | 0.567906 | 8_1:+54392419 | None:intergenic |
| GACGATGTTATTGTGTTCAA+GGG | 0.569592 | 8_1:-54392186 | Msa1201200:CDS |
| AAGTGTTGTTACTGCTAAGA+GGG | 0.570047 | 8_1:+54392445 | None:intergenic |
| AGCGAGTCGTAGACAGGGTG+AGG | 0.572671 | 8_1:+54392645 | None:intergenic |
| TATAAGTTGGATGAAGAATG+GGG | 0.581944 | 8_1:-54391931 | Msa1201200:CDS |
| GCCATCTAACATCTCATCCA+AGG | 0.582881 | 8_1:+54391694 | None:intergenic |
| GAGTTGGAACTTGCATCAGT+TGG | 0.584443 | 8_1:+54392582 | None:intergenic |
| AGCTTGTTGTATCTTTCAAG+AGG | 0.595503 | 8_1:-54392277 | Msa1201200:CDS |
| AAGACTTAATTGGATATCAA+GGG | 0.598333 | 8_1:-54391831 | Msa1201200:CDS |
| GCTTGTTGTATCTTTCAAGA+GGG | 0.601791 | 8_1:-54392276 | Msa1201200:CDS |
| TGTTTAGCGAGTCGTAGACA+GGG | 0.623455 | 8_1:+54392640 | None:intergenic |
| AAATTAGGATTCATGAAACA+TGG | 0.629944 | 8_1:-54392252 | Msa1201200:CDS |
| TTTCCAAATCCACACAAAGG+AGG | 0.638096 | 8_1:+54392087 | None:intergenic |
| CAATCCTCAACACTAGTCCA+AGG | 0.639391 | 8_1:+54392303 | None:intergenic |
| AAAGTAGTGAAGACATGGGA+AGG | 0.643211 | 8_1:-54392008 | Msa1201200:CDS |
| CTACGATCGAGACACTGATG+TGG | 0.646731 | 8_1:-54391968 | Msa1201200:CDS |
| TTGTTTCCAAATCCACACAA+AGG | 0.650065 | 8_1:+54392084 | None:intergenic |
| AAGCATTTGATGGAGTCATG+TGG | 0.661502 | 8_1:-54392060 | Msa1201200:CDS |
| TGTGAAAGTAGTGAAGACAT+GGG | 0.714849 | 8_1:-54392012 | Msa1201200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTATGTTACTGATAAA+TGG | - | chr8_1:54392408-54392427 | Msa1201200:CDS | 20.0% |
| !!! | GTTTTATGTTACTGATAAAT+GGG | - | chr8_1:54392409-54392428 | Msa1201200:CDS | 20.0% |
| !!! | TTTTATGTTACTGATAAATG+GGG | - | chr8_1:54392410-54392429 | Msa1201200:CDS | 20.0% |
| !! | ATGTTTCAAAGTTTATAAGT+TGG | - | chr8_1:54392625-54392644 | Msa1201200:CDS | 20.0% |
| !!! | AGTTTTATGTTACTGATAAA+TGG | - | chr8_1:54392408-54392427 | Msa1201200:CDS | 20.0% |
| !!! | GTTTTATGTTACTGATAAAT+GGG | - | chr8_1:54392409-54392428 | Msa1201200:CDS | 20.0% |
| !!! | TTTTATGTTACTGATAAATG+GGG | - | chr8_1:54392410-54392429 | Msa1201200:CDS | 20.0% |
| !! | ATGTTTCAAAGTTTATAAGT+TGG | - | chr8_1:54392625-54392644 | Msa1201200:CDS | 20.0% |
| !! | TCAAGATATTTTCCTATCTT+AGG | + | chr8_1:54391804-54391823 | None:intergenic | 25.0% |
| !! | AGTTGGTTCAATGATATAAA+CGG | + | chr8_1:54391973-54391992 | None:intergenic | 25.0% |
| !!! | TAAGAGGGTATGATAATTTT+CGG | + | chr8_1:54392112-54392131 | None:intergenic | 25.0% |
| ! | AAATTAGGATTCATGAAACA+TGG | - | chr8_1:54392317-54392336 | Msa1201200:CDS | 25.0% |
| !! | TTTATAAGTTGGATGAAGAA+TGG | - | chr8_1:54392636-54392655 | Msa1201200:CDS | 25.0% |
| !! | TTATAAGTTGGATGAAGAAT+GGG | - | chr8_1:54392637-54392656 | Msa1201200:CDS | 25.0% |
| ! | AAAGACTTAATTGGATATCA+AGG | - | chr8_1:54392737-54392756 | Msa1201200:CDS | 25.0% |
| ! | AAGACTTAATTGGATATCAA+GGG | - | chr8_1:54392738-54392757 | Msa1201200:CDS | 25.0% |
| ! | TGATGTTCGTATGTATAATT+TGG | - | chr8_1:54392787-54392806 | Msa1201200:CDS | 25.0% |
| !! | TCAAGATATTTTCCTATCTT+AGG | + | chr8_1:54391804-54391823 | None:intergenic | 25.0% |
| !! | AGTTGGTTCAATGATATAAA+CGG | + | chr8_1:54391973-54391992 | None:intergenic | 25.0% |
| !!! | TAAGAGGGTATGATAATTTT+CGG | + | chr8_1:54392112-54392131 | None:intergenic | 25.0% |
| ! | AAATTAGGATTCATGAAACA+TGG | - | chr8_1:54392317-54392336 | Msa1201200:CDS | 25.0% |
| !! | TTTATAAGTTGGATGAAGAA+TGG | - | chr8_1:54392636-54392655 | Msa1201200:CDS | 25.0% |
| !! | TTATAAGTTGGATGAAGAAT+GGG | - | chr8_1:54392637-54392656 | Msa1201200:CDS | 25.0% |
| ! | AAAGACTTAATTGGATATCA+AGG | - | chr8_1:54392737-54392756 | Msa1201200:CDS | 25.0% |
| ! | AAGACTTAATTGGATATCAA+GGG | - | chr8_1:54392738-54392757 | Msa1201200:CDS | 25.0% |
| ! | TGATGTTCGTATGTATAATT+TGG | - | chr8_1:54392787-54392806 | Msa1201200:CDS | 25.0% |
| ! | GGTATTTGTAATGGAAAAGA+AGG | + | chr8_1:54391906-54391925 | None:intergenic | 30.0% |
| CAATGATATAAACGGTTGAT+TGG | + | chr8_1:54391965-54391984 | None:intergenic | 30.0% | |
| !! | TAAAGGTTCTAAATTGGAGT+TGG | + | chr8_1:54392006-54392025 | None:intergenic | 30.0% |
| ATCTTTCAAGAGGGTAAATT+AGG | - | chr8_1:54392302-54392321 | Msa1201200:CDS | 30.0% | |
| ! | TGAAACATGGTGATGAAAAA+TGG | - | chr8_1:54392330-54392349 | Msa1201200:CDS | 30.0% |
| ATAAATGGGGAACTATTTCA+TGG | - | chr8_1:54392423-54392442 | Msa1201200:CDS | 30.0% | |
| ! | TATAAGTTGGATGAAGAATG+GGG | - | chr8_1:54392638-54392657 | Msa1201200:CDS | 30.0% |
| GTCTCAACTAAAGACTTAAT+TGG | - | chr8_1:54392728-54392747 | Msa1201200:CDS | 30.0% | |
| ! | GGTATTTGTAATGGAAAAGA+AGG | + | chr8_1:54391906-54391925 | None:intergenic | 30.0% |
| CAATGATATAAACGGTTGAT+TGG | + | chr8_1:54391965-54391984 | None:intergenic | 30.0% | |
| !! | TAAAGGTTCTAAATTGGAGT+TGG | + | chr8_1:54392006-54392025 | None:intergenic | 30.0% |
| ATCTTTCAAGAGGGTAAATT+AGG | - | chr8_1:54392302-54392321 | Msa1201200:CDS | 30.0% | |
| ! | TGAAACATGGTGATGAAAAA+TGG | - | chr8_1:54392330-54392349 | Msa1201200:CDS | 30.0% |
| ATAAATGGGGAACTATTTCA+TGG | - | chr8_1:54392423-54392442 | Msa1201200:CDS | 30.0% | |
| ! | TATAAGTTGGATGAAGAATG+GGG | - | chr8_1:54392638-54392657 | Msa1201200:CDS | 30.0% |
| GTCTCAACTAAAGACTTAAT+TGG | - | chr8_1:54392728-54392747 | Msa1201200:CDS | 30.0% | |
| ATCTGATTCTTCTTCATCCA+TGG | - | chr8_1:54391737-54391756 | Msa1201200:CDS | 35.0% | |
| CTCAACTTCCTATAGAACTA+TGG | - | chr8_1:54391778-54391797 | Msa1201200:CDS | 35.0% | |
| ! | ATCTTAGGCCATAGTTCTAT+AGG | + | chr8_1:54391789-54391808 | None:intergenic | 35.0% |
| ATAGAACTATGGCCTAAGAT+AGG | - | chr8_1:54391789-54391808 | Msa1201200:CDS | 35.0% | |
| AATGGAAAAGAAGGAGAGTT+TGG | + | chr8_1:54391897-54391916 | None:intergenic | 35.0% | |
| !! | AGGTGCTAAAGGTTCTAAAT+TGG | + | chr8_1:54392012-54392031 | None:intergenic | 35.0% |
| ATAGGACTCAACAAACTTAC+AGG | + | chr8_1:54392083-54392102 | None:intergenic | 35.0% | |
| ! | GATAATTTTCGGTCAGAGAT+AGG | + | chr8_1:54392101-54392120 | None:intergenic | 35.0% |
| ! | AAGTGTTGTTACTGCTAAGA+GGG | + | chr8_1:54392127-54392146 | None:intergenic | 35.0% |
| !! | TATGGAACTTGTTGGATCAT+AGG | - | chr8_1:54392156-54392175 | Msa1201200:CDS | 35.0% |
| !! | ATGGAACTTGTTGGATCATA+GGG | - | chr8_1:54392157-54392176 | Msa1201200:CDS | 35.0% |
| !! | AGCTTGTTGTATCTTTCAAG+AGG | - | chr8_1:54392292-54392311 | Msa1201200:CDS | 35.0% |
| !! | GCTTGTTGTATCTTTCAAGA+GGG | - | chr8_1:54392293-54392312 | Msa1201200:CDS | 35.0% |
| TGATGAAAAATGGACACTTG+TGG | - | chr8_1:54392340-54392359 | Msa1201200:CDS | 35.0% | |
| TGACGATGTTATTGTGTTCA+AGG | - | chr8_1:54392382-54392401 | Msa1201200:CDS | 35.0% | |
| GACGATGTTATTGTGTTCAA+GGG | - | chr8_1:54392383-54392402 | Msa1201200:CDS | 35.0% | |
| TTGTTTCCAAATCCACACAA+AGG | + | chr8_1:54392488-54392507 | None:intergenic | 35.0% | |
| !! | TGGAAACAAGAAGCATTTGA+TGG | - | chr8_1:54392499-54392518 | Msa1201200:CDS | 35.0% |
| TGTGAAAGTAGTGAAGACAT+GGG | - | chr8_1:54392557-54392576 | Msa1201200:CDS | 35.0% | |
| GGATGATCATAGAATCACTA+TGG | - | chr8_1:54392808-54392827 | Msa1201200:CDS | 35.0% | |
| ! | CACAAAGTCTTGTCAATACA+AGG | + | chr8_1:54392845-54392864 | None:intergenic | 35.0% |
| ! | CTTGTATTGACAAGACTTTG+TGG | - | chr8_1:54392843-54392862 | Msa1201200:CDS | 35.0% |
| ATCTGATTCTTCTTCATCCA+TGG | - | chr8_1:54391737-54391756 | Msa1201200:CDS | 35.0% | |
| CTCAACTTCCTATAGAACTA+TGG | - | chr8_1:54391778-54391797 | Msa1201200:CDS | 35.0% | |
| ! | ATCTTAGGCCATAGTTCTAT+AGG | + | chr8_1:54391789-54391808 | None:intergenic | 35.0% |
| ATAGAACTATGGCCTAAGAT+AGG | - | chr8_1:54391789-54391808 | Msa1201200:CDS | 35.0% | |
| AATGGAAAAGAAGGAGAGTT+TGG | + | chr8_1:54391897-54391916 | None:intergenic | 35.0% | |
| !! | AGGTGCTAAAGGTTCTAAAT+TGG | + | chr8_1:54392012-54392031 | None:intergenic | 35.0% |
| ATAGGACTCAACAAACTTAC+AGG | + | chr8_1:54392083-54392102 | None:intergenic | 35.0% | |
| ! | GATAATTTTCGGTCAGAGAT+AGG | + | chr8_1:54392101-54392120 | None:intergenic | 35.0% |
| ! | AAGTGTTGTTACTGCTAAGA+GGG | + | chr8_1:54392127-54392146 | None:intergenic | 35.0% |
| !! | TATGGAACTTGTTGGATCAT+AGG | - | chr8_1:54392156-54392175 | Msa1201200:CDS | 35.0% |
| !! | ATGGAACTTGTTGGATCATA+GGG | - | chr8_1:54392157-54392176 | Msa1201200:CDS | 35.0% |
| !! | AGCTTGTTGTATCTTTCAAG+AGG | - | chr8_1:54392292-54392311 | Msa1201200:CDS | 35.0% |
| !! | GCTTGTTGTATCTTTCAAGA+GGG | - | chr8_1:54392293-54392312 | Msa1201200:CDS | 35.0% |
| TGATGAAAAATGGACACTTG+TGG | - | chr8_1:54392340-54392359 | Msa1201200:CDS | 35.0% | |
| TGACGATGTTATTGTGTTCA+AGG | - | chr8_1:54392382-54392401 | Msa1201200:CDS | 35.0% | |
| GACGATGTTATTGTGTTCAA+GGG | - | chr8_1:54392383-54392402 | Msa1201200:CDS | 35.0% | |
| TTGTTTCCAAATCCACACAA+AGG | + | chr8_1:54392488-54392507 | None:intergenic | 35.0% | |
| !! | TGGAAACAAGAAGCATTTGA+TGG | - | chr8_1:54392499-54392518 | Msa1201200:CDS | 35.0% |
| TGTGAAAGTAGTGAAGACAT+GGG | - | chr8_1:54392557-54392576 | Msa1201200:CDS | 35.0% | |
| GGATGATCATAGAATCACTA+TGG | - | chr8_1:54392808-54392827 | Msa1201200:CDS | 35.0% | |
| ! | CACAAAGTCTTGTCAATACA+AGG | + | chr8_1:54392845-54392864 | None:intergenic | 35.0% |
| ! | CTTGTATTGACAAGACTTTG+TGG | - | chr8_1:54392843-54392862 | Msa1201200:CDS | 35.0% |
| CCAATCAACTATCTCATCCA+TGG | + | chr8_1:54391757-54391776 | None:intergenic | 40.0% | |
| CCATGGATGAGATAGTTGAT+TGG | - | chr8_1:54391754-54391773 | Msa1201200:CDS | 40.0% | |
| ! | ACAGGGTGAGGTATTTGTAA+TGG | + | chr8_1:54391915-54391934 | None:intergenic | 40.0% |
| !! | TTGGAAGAAGAAGGTGCTAA+AGG | + | chr8_1:54392023-54392042 | None:intergenic | 40.0% |
| TTAGCACCTTCTTCTTCCAA+AGG | - | chr8_1:54392023-54392042 | Msa1201200:CDS | 40.0% | |
| ! | TTCCAAAGGTTGGCTGATTA+AGG | - | chr8_1:54392037-54392056 | Msa1201200:CDS | 40.0% |
| TACCTTAATCAGCCAACCTT+TGG | + | chr8_1:54392042-54392061 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGTTACTGCTAAG+AGG | + | chr8_1:54392128-54392147 | None:intergenic | 40.0% |
| ACAACACTTCTACCATGCTA+TGG | - | chr8_1:54392138-54392157 | Msa1201200:CDS | 40.0% | |
| TACCATGCTATGGAACTTGT+TGG | - | chr8_1:54392148-54392167 | Msa1201200:CDS | 40.0% | |
| ATCCAACAAGTTCCATAGCA+TGG | + | chr8_1:54392153-54392172 | None:intergenic | 40.0% | |
| TGTTCTATCCTAACTCTCCT+TGG | - | chr8_1:54392249-54392268 | Msa1201200:CDS | 40.0% | |
| TTTCCAAATCCACACAAAGG+AGG | + | chr8_1:54392485-54392504 | None:intergenic | 40.0% | |
| AAGCATTTGATGGAGTCATG+TGG | - | chr8_1:54392509-54392528 | Msa1201200:CDS | 40.0% | |
| CTGTGAAAGTAGTGAAGACA+TGG | - | chr8_1:54392556-54392575 | Msa1201200:CDS | 40.0% | |
| AAAGTAGTGAAGACATGGGA+AGG | - | chr8_1:54392561-54392580 | Msa1201200:CDS | 40.0% | |
| TGGATGAAGAATGGGGAAAA+TGG | - | chr8_1:54392645-54392664 | Msa1201200:CDS | 40.0% | |
| GGATGAAGAATGGGGAAAAT+GGG | - | chr8_1:54392646-54392665 | Msa1201200:CDS | 40.0% | |
| AAGGGAACTGCATCTACTTT+AGG | - | chr8_1:54392756-54392775 | Msa1201200:CDS | 40.0% | |
| AGGGAACTGCATCTACTTTA+GGG | - | chr8_1:54392757-54392776 | Msa1201200:CDS | 40.0% | |
| CCAATCAACTATCTCATCCA+TGG | + | chr8_1:54391757-54391776 | None:intergenic | 40.0% | |
| CCATGGATGAGATAGTTGAT+TGG | - | chr8_1:54391754-54391773 | Msa1201200:CDS | 40.0% | |
| ! | ACAGGGTGAGGTATTTGTAA+TGG | + | chr8_1:54391915-54391934 | None:intergenic | 40.0% |
| !! | TTGGAAGAAGAAGGTGCTAA+AGG | + | chr8_1:54392023-54392042 | None:intergenic | 40.0% |
| TTAGCACCTTCTTCTTCCAA+AGG | - | chr8_1:54392023-54392042 | Msa1201200:CDS | 40.0% | |
| ! | TTCCAAAGGTTGGCTGATTA+AGG | - | chr8_1:54392037-54392056 | Msa1201200:CDS | 40.0% |
| TACCTTAATCAGCCAACCTT+TGG | + | chr8_1:54392042-54392061 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGTTACTGCTAAG+AGG | + | chr8_1:54392128-54392147 | None:intergenic | 40.0% |
| ACAACACTTCTACCATGCTA+TGG | - | chr8_1:54392138-54392157 | Msa1201200:CDS | 40.0% | |
| TACCATGCTATGGAACTTGT+TGG | - | chr8_1:54392148-54392167 | Msa1201200:CDS | 40.0% | |
| ATCCAACAAGTTCCATAGCA+TGG | + | chr8_1:54392153-54392172 | None:intergenic | 40.0% | |
| TGTTCTATCCTAACTCTCCT+TGG | - | chr8_1:54392249-54392268 | Msa1201200:CDS | 40.0% | |
| TTTCCAAATCCACACAAAGG+AGG | + | chr8_1:54392485-54392504 | None:intergenic | 40.0% | |
| AAGCATTTGATGGAGTCATG+TGG | - | chr8_1:54392509-54392528 | Msa1201200:CDS | 40.0% | |
| CTGTGAAAGTAGTGAAGACA+TGG | - | chr8_1:54392556-54392575 | Msa1201200:CDS | 40.0% | |
| AAAGTAGTGAAGACATGGGA+AGG | - | chr8_1:54392561-54392580 | Msa1201200:CDS | 40.0% | |
| TGGATGAAGAATGGGGAAAA+TGG | - | chr8_1:54392645-54392664 | Msa1201200:CDS | 40.0% | |
| GGATGAAGAATGGGGAAAAT+GGG | - | chr8_1:54392646-54392665 | Msa1201200:CDS | 40.0% | |
| AAGGGAACTGCATCTACTTT+AGG | - | chr8_1:54392756-54392775 | Msa1201200:CDS | 40.0% | |
| AGGGAACTGCATCTACTTTA+GGG | - | chr8_1:54392757-54392776 | Msa1201200:CDS | 40.0% | |
| GTTTGGATGAGATGGAGGAA+TGG | + | chr8_1:54391880-54391899 | None:intergenic | 45.0% | |
| GAAGGAGAGTTTGGATGAGA+TGG | + | chr8_1:54391888-54391907 | None:intergenic | 45.0% | |
| TGTTTAGCGAGTCGTAGACA+GGG | + | chr8_1:54391932-54391951 | None:intergenic | 45.0% | |
| TTGTTTAGCGAGTCGTAGAC+AGG | + | chr8_1:54391933-54391952 | None:intergenic | 45.0% | |
| GAGTTGGAACTTGCATCAGT+TGG | + | chr8_1:54391990-54392009 | None:intergenic | 45.0% | |
| CACCTTCTTCTTCCAAAGGT+TGG | - | chr8_1:54392027-54392046 | Msa1201200:CDS | 45.0% | |
| ! | AGCCAACCTTTGGAAGAAGA+AGG | + | chr8_1:54392032-54392051 | None:intergenic | 45.0% |
| ACACTAGTCCAAGGAGAGTT+AGG | + | chr8_1:54392260-54392279 | None:intergenic | 45.0% | |
| CAATCCTCAACACTAGTCCA+AGG | + | chr8_1:54392269-54392288 | None:intergenic | 45.0% | |
| CAATTCTCACCTCCTTTGTG+TGG | - | chr8_1:54392473-54392492 | Msa1201200:CDS | 45.0% | |
| TCACCTCCTTTGTGTGGATT+TGG | - | chr8_1:54392479-54392498 | Msa1201200:CDS | 45.0% | |
| GTTTGGATGAGATGGAGGAA+TGG | + | chr8_1:54391880-54391899 | None:intergenic | 45.0% | |
| GAAGGAGAGTTTGGATGAGA+TGG | + | chr8_1:54391888-54391907 | None:intergenic | 45.0% | |
| TGTTTAGCGAGTCGTAGACA+GGG | + | chr8_1:54391932-54391951 | None:intergenic | 45.0% | |
| TTGTTTAGCGAGTCGTAGAC+AGG | + | chr8_1:54391933-54391952 | None:intergenic | 45.0% | |
| GAGTTGGAACTTGCATCAGT+TGG | + | chr8_1:54391990-54392009 | None:intergenic | 45.0% | |
| CACCTTCTTCTTCCAAAGGT+TGG | - | chr8_1:54392027-54392046 | Msa1201200:CDS | 45.0% | |
| ! | AGCCAACCTTTGGAAGAAGA+AGG | + | chr8_1:54392032-54392051 | None:intergenic | 45.0% |
| ACACTAGTCCAAGGAGAGTT+AGG | + | chr8_1:54392260-54392279 | None:intergenic | 45.0% | |
| CAATCCTCAACACTAGTCCA+AGG | + | chr8_1:54392269-54392288 | None:intergenic | 45.0% | |
| CAATTCTCACCTCCTTTGTG+TGG | - | chr8_1:54392473-54392492 | Msa1201200:CDS | 45.0% | |
| TCACCTCCTTTGTGTGGATT+TGG | - | chr8_1:54392479-54392498 | Msa1201200:CDS | 45.0% | |
| GGAGAGTTTGGATGAGATGG+AGG | + | chr8_1:54391885-54391904 | None:intergenic | 50.0% | |
| !! | CTCTCCTTGGACTAGTGTTG+AGG | - | chr8_1:54392262-54392281 | Msa1201200:CDS | 50.0% |
| CTACGATCGAGACACTGATG+TGG | - | chr8_1:54392601-54392620 | Msa1201200:CDS | 50.0% | |
| CTTTGTGGTCTCGTTCACCT+TGG | - | chr8_1:54392858-54392877 | Msa1201200:CDS | 50.0% | |
| GGAGAGTTTGGATGAGATGG+AGG | + | chr8_1:54391885-54391904 | None:intergenic | 50.0% | |
| !! | CTCTCCTTGGACTAGTGTTG+AGG | - | chr8_1:54392262-54392281 | Msa1201200:CDS | 50.0% |
| CTACGATCGAGACACTGATG+TGG | - | chr8_1:54392601-54392620 | Msa1201200:CDS | 50.0% | |
| CTTTGTGGTCTCGTTCACCT+TGG | - | chr8_1:54392858-54392877 | Msa1201200:CDS | 50.0% | |
| AGCGAGTCGTAGACAGGGTG+AGG | + | chr8_1:54391927-54391946 | None:intergenic | 60.0% | |
| AGCGAGTCGTAGACAGGGTG+AGG | + | chr8_1:54391927-54391946 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 54391699 | 54392892 | 54391699 | ID=Msa1201200;Name=Msa1201200 |
| chr8_1 | mRNA | 54391699 | 54392892 | 54391699 | ID=Msa1201200-mRNA-1;Parent=Msa1201200;Name=Msa1201200-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|397 |
| chr8_1 | exon | 54391699 | 54392892 | 54391699 | ID=Msa1201200-mRNA-1:exon:17474;Parent=Msa1201200-mRNA-1 |
| chr8_1 | CDS | 54391699 | 54392892 | 54391699 | ID=Msa1201200-mRNA-1:cds;Parent=Msa1201200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
