Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841100 | XP_003612737.2 | 97.578 | 289 | 7 | 0 | 13 | 301 | 1 | 289 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841100 | sp|Q9LUJ5|EBP2_ARATH | 65.188 | 293 | 87 | 6 | 14 | 302 | 12 | 293 | 7.81e-125 | 361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841100 | G7KAW7 | 97.578 | 289 | 7 | 0 | 13 | 301 | 1 | 289 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079180 | Msa0841100 | 0.809331 | 1.994867e-50 | -8.615850e-47 |
| Msa0711780 | Msa0841100 | 0.802787 | 4.753981e-49 | -8.615850e-47 |
| Msa0830540 | Msa0841100 | 0.826149 | 3.179038e-54 | -8.615850e-47 |
| Msa0841100 | Msa1160590 | 0.817458 | 3.263028e-52 | -8.615850e-47 |
| Msa0841100 | Msa1181250 | 0.839249 | 1.774497e-57 | -8.615850e-47 |
| Msa0841100 | Msa1181330 | 0.849265 | 3.612000e-60 | -8.615850e-47 |
| Msa0841100 | Msa1419870 | 0.800043 | 1.734388e-48 | -8.615850e-47 |
| Msa0841100 | Msa1457920 | 0.800741 | 1.250115e-48 | -8.615850e-47 |
| Msa0189300 | Msa0841100 | 0.805849 | 1.094163e-49 | -8.615850e-47 |
| Msa0502090 | Msa0841100 | 0.819924 | 8.993412e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841100 | MtrunA17_Chr5g0410311 | 97.578 | 289 | 7 | 0 | 13 | 301 | 1 | 289 | 0.0 | 570 |
| Msa0841100 | MtrunA17_Chr8g0371671 | 84.880 | 291 | 40 | 3 | 13 | 302 | 1 | 288 | 2.51e-152 | 427 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841100 | AT3G22660.1 | 65.188 | 293 | 87 | 6 | 14 | 302 | 12 | 293 | 7.94e-126 | 361 |
Find 84 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTTACCATGATCTAAA+TGG | 0.169389 | 5_4:+17074290 | None:intergenic |
| CCGGCCTCCAAAACCAAATT+TGG | 0.189093 | 5_4:+17074504 | None:intergenic |
| GCTGAAACAACTAATGATTT+TGG | 0.204488 | 5_4:-17074457 | Msa0841100:CDS |
| GATACTAAGAATGCCAAATT+TGG | 0.209577 | 5_4:-17074517 | Msa0841100:CDS |
| AAGAATGCCAAATTTGGTTT+TGG | 0.274042 | 5_4:-17074511 | Msa0841100:CDS |
| GGTAAGTTGATAAACTTTAT+TGG | 0.278500 | 5_4:-17074277 | Msa0841100:three_prime_UTR |
| TCAAAGCTCAAAGACTTATC+TGG | 0.326167 | 5_4:+17074658 | None:intergenic |
| AGAAAGGGCCAAGCAGAAAA+AGG | 0.351345 | 5_4:-17074752 | Msa0841100:CDS |
| TCTGCTTCTTTGATCCCTTC+CGG | 0.358209 | 5_4:+17074485 | None:intergenic |
| TCAGTTTCACCGTCAATCAT+TGG | 0.370634 | 5_4:+17075231 | None:intergenic |
| TGCTTCCAATCCACATTCTC+AGG | 0.372391 | 5_4:+17075081 | None:intergenic |
| GATTGAAATGGAGGTGCCTT+TGG | 0.375124 | 5_4:-17075265 | Msa0841100:CDS |
| TTCAGTAAGGGTTCTGCTGC+TGG | 0.381325 | 5_4:-17074430 | Msa0841100:CDS |
| TGACGGTGAAACTGAAGATT+TGG | 0.389943 | 5_4:-17075223 | Msa0841100:CDS |
| TTACCTCCTGACCGATCTCC+TGG | 0.396701 | 5_4:+17074586 | None:intergenic |
| AGACAATCTCTTTGCTTCCC+TGG | 0.401049 | 5_4:+17074801 | None:intergenic |
| AGATAAGTCTTTGAGCTTTG+AGG | 0.404345 | 5_4:-17074656 | Msa0841100:CDS |
| CTGAAGAGAGAAGAAAGGCC+AGG | 0.422247 | 5_4:-17074819 | Msa0841100:CDS |
| TCTCTTTCCCATTTAGATCA+TGG | 0.428319 | 5_4:-17074298 | Msa0841100:three_prime_UTR |
| CTCTCCATTGATATTGATCA+AGG | 0.429280 | 5_4:-17075054 | Msa0841100:CDS |
| CAACTTACCATGATCTAAAT+GGG | 0.432735 | 5_4:+17074291 | None:intergenic |
| GGTATTTGTATAGATTGAAA+TGG | 0.441908 | 5_4:-17075277 | Msa0841100:intron |
| AGTCACAGAAATTGAAAGAA+AGG | 0.458750 | 5_4:-17074768 | Msa0841100:CDS |
| AATGCGGCTATGGCACAATC+TGG | 0.459141 | 5_4:-17074345 | Msa0841100:three_prime_UTR |
| ATGGAGGTGCCTTTGGTTAA+CGG | 0.462087 | 5_4:-17075258 | Msa0841100:CDS |
| TAGTCAGCAGGTCTCAAGAA+AGG | 0.478435 | 5_4:+17074925 | None:intergenic |
| CGTGTCATGGAATGCGGCTA+TGG | 0.478909 | 5_4:-17074355 | Msa0841100:three_prime_UTR |
| CTTTGAGAAGCTTGAGTCGA+TGG | 0.481104 | 5_4:-17074953 | Msa0841100:CDS |
| TGCTGACTATTACGCAGAAA+TGG | 0.488469 | 5_4:-17074911 | Msa0841100:CDS |
| CTCCCCTTGATCAATATCAA+TGG | 0.492911 | 5_4:+17075050 | None:intergenic |
| AGGAGATCGGTCAGGAGGTA+AGG | 0.497659 | 5_4:-17074584 | Msa0841100:CDS |
| AGTCAGCAGGTCTCAAGAAA+GGG | 0.501463 | 5_4:+17074926 | None:intergenic |
| GGGAGATAGCCACATGGAAA+AGG | 0.502899 | 5_4:-17074884 | Msa0841100:CDS |
| CATAAGCTGGCCTGAGAATG+TGG | 0.503617 | 5_4:-17075091 | Msa0841100:CDS |
| TCTTCTGAATCTGATTCAAA+CGG | 0.503965 | 5_4:+17075186 | None:intergenic |
| GTCACAGAAATTGAAAGAAA+GGG | 0.504083 | 5_4:-17074767 | Msa0841100:CDS |
| GCAAAGCAAGCTATGGGAAA+GGG | 0.507585 | 5_4:-17074562 | Msa0841100:CDS |
| ATTAGATGAGAAGCGGAAGA+TGG | 0.510158 | 5_4:-17074848 | Msa0841100:CDS |
| GGCATTGGAGGGAACTAGAC+AGG | 0.514311 | 5_4:-17074977 | Msa0841100:CDS |
| AGGTAAGGCAAAGCAAGCTA+TGG | 0.517763 | 5_4:-17074569 | Msa0841100:CDS |
| TTTGAGAAGCTTGAGTCGAT+GGG | 0.525398 | 5_4:-17074952 | Msa0841100:CDS |
| GGAGGCTGAAGAGAGAAGAA+AGG | 0.530598 | 5_4:-17074824 | Msa0841100:CDS |
| TTTCTCACAAAGGCGTGTCA+TGG | 0.534530 | 5_4:-17074368 | Msa0841100:three_prime_UTR |
| CAAAGACTTATCTGGAGCAT+CGG | 0.536868 | 5_4:+17074666 | None:intergenic |
| AGATGAGAAGCGGAAGATGG+AGG | 0.539024 | 5_4:-17074845 | Msa0841100:CDS |
| GATGCTATATTAGATAAACT+TGG | 0.546950 | 5_4:-17075117 | Msa0841100:CDS |
| AAGAGGCCTGGAGTATCTCC+AGG | 0.554201 | 5_4:-17074604 | Msa0841100:CDS |
| AACGGTGATCCAATGATTGA+CGG | 0.554237 | 5_4:-17075240 | Msa0841100:CDS |
| AAACAAAACATAAGAGGACT+CGG | 0.555570 | 5_4:-17076242 | Msa0841100:CDS |
| AGCAAAGAGATTGTCTAAAG+AGG | 0.557828 | 5_4:-17074794 | Msa0841100:CDS |
| CTCCATTGATATTGATCAAG+GGG | 0.559298 | 5_4:-17075052 | Msa0841100:CDS |
| GTATCTCCAGGAGATCGGTC+AGG | 0.562327 | 5_4:-17074592 | Msa0841100:CDS |
| CGATCTCCTGGAGATACTCC+AGG | 0.563198 | 5_4:+17074598 | None:intergenic |
| AGTAGATGTGAACGATGACT+TGG | 0.565329 | 5_4:-17075025 | Msa0841100:CDS |
| ATTTCTGCGTAATAGTCAGC+AGG | 0.568461 | 5_4:+17074913 | None:intergenic |
| TGTCTCTACTAACACAGGCT+TGG | 0.570044 | 5_4:+17074151 | None:intergenic |
| ATAAACTTGGAGACATAAGC+TGG | 0.571619 | 5_4:-17075104 | Msa0841100:CDS |
| CTGGAGTATCTCCAGGAGAT+CGG | 0.573853 | 5_4:-17074597 | Msa0841100:CDS |
| AAGTCTTTGAGCTTTGAGGA+TGG | 0.576787 | 5_4:-17074652 | Msa0841100:CDS |
| TGAAGAGAGAAGAAAGGCCA+GGG | 0.579670 | 5_4:-17074818 | Msa0841100:CDS |
| CAACAGAGTGGGTTTGCTGA+TGG | 0.580952 | 5_4:-17074691 | Msa0841100:CDS |
| CATCGACTCAAGCTTCTCAA+AGG | 0.582387 | 5_4:+17074954 | None:intergenic |
| GGCAAAGCAAGCTATGGGAA+AGG | 0.584114 | 5_4:-17074563 | Msa0841100:CDS |
| TCTCCATTGATATTGATCAA+GGG | 0.594778 | 5_4:-17075053 | Msa0841100:CDS |
| GGTAAGGCAAAGCAAGCTAT+GGG | 0.598074 | 5_4:-17074568 | Msa0841100:CDS |
| GGAAGCAGAGACAACAGAGT+GGG | 0.599709 | 5_4:-17074702 | Msa0841100:CDS |
| ACATTGAATCTGTTAAGAAG+TGG | 0.600860 | 5_4:-17074726 | Msa0841100:CDS |
| TGAGAAGCGGAAGATGGAGG+AGG | 0.603783 | 5_4:-17074842 | Msa0841100:CDS |
| TTGAATCTGTTAAGAAGTGG+AGG | 0.608378 | 5_4:-17074723 | Msa0841100:CDS |
| CTATTACGCAGAAATGGTGA+AGG | 0.608653 | 5_4:-17074905 | Msa0841100:CDS |
| GTCGGCTATTAGATGAGAAG+CGG | 0.609331 | 5_4:-17074855 | Msa0841100:CDS |
| GCTGGCCTGAGAATGTGGAT+TGG | 0.611875 | 5_4:-17075086 | Msa0841100:CDS |
| ATTTGTATAGATTGAAATGG+AGG | 0.615579 | 5_4:-17075274 | Msa0841100:intron |
| ACATGGAAAAGGTGAAAAGT+CGG | 0.619320 | 5_4:-17074873 | Msa0841100:CDS |
| CAAAGGCGTGTCATGGAATG+CGG | 0.630244 | 5_4:-17074361 | Msa0841100:three_prime_UTR |
| AACAAAACATAAGAGGACTC+GGG | 0.639028 | 5_4:-17076241 | Msa0841100:intron |
| AGATATGTCTCTACTAACAC+AGG | 0.644101 | 5_4:+17074146 | None:intergenic |
| TGAAACTGAAGATTTGGACG+AGG | 0.647314 | 5_4:-17075217 | Msa0841100:CDS |
| AGGAAGCAGAGACAACAGAG+TGG | 0.651328 | 5_4:-17074703 | Msa0841100:CDS |
| CATTGATATTGATCAAGGGG+AGG | 0.657330 | 5_4:-17075049 | Msa0841100:CDS |
| TCTCCAGGAGATCGGTCAGG+AGG | 0.664692 | 5_4:-17074589 | Msa0841100:CDS |
| ATTGGATCACCGTTAACCAA+AGG | 0.669243 | 5_4:+17075249 | None:intergenic |
| TATTACGCAGAAATGGTGAA+GGG | 0.681147 | 5_4:-17074904 | Msa0841100:CDS |
| GGTGAAGGGAGATAGCCACA+TGG | 0.757517 | 5_4:-17074890 | Msa0841100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATTTGTTCAAAAT+TGG | - | chr5_4:17074512-17074531 | Msa0841100:CDS | 10.0% |
| !!! | TTTTTTAATTTGTTCAAAAT+TGG | - | chr5_4:17074512-17074531 | Msa0841100:CDS | 10.0% |
| !!! | AATCAGTTGAAATTTTTTTA+GGG | + | chr5_4:17074251-17074270 | None:intergenic | 15.0% |
| !! | AATTAACACAAATAACTAAA+GGG | + | chr5_4:17074867-17074886 | None:intergenic | 15.0% |
| !!! | TTGATTTGTTTTACTTTATT+TGG | - | chr5_4:17075100-17075119 | Msa0841100:CDS | 15.0% |
| !!! | AGAATTTTAATCAAATTTGT+AGG | - | chr5_4:17076076-17076095 | Msa0841100:intron | 15.0% |
| !!! | AATCAGTTGAAATTTTTTTA+GGG | + | chr5_4:17074251-17074270 | None:intergenic | 15.0% |
| !! | AATTAACACAAATAACTAAA+GGG | + | chr5_4:17074867-17074886 | None:intergenic | 15.0% |
| !!! | TTGATTTGTTTTACTTTATT+TGG | - | chr5_4:17075100-17075119 | Msa0841100:CDS | 15.0% |
| !!! | AGAATTTTAATCAAATTTGT+AGG | - | chr5_4:17076076-17076095 | Msa0841100:intron | 15.0% |
| !!! | AAATTTTTTTAGGGTTTAGA+GGG | + | chr5_4:17074242-17074261 | None:intergenic | 20.0% |
| !!! | GAATCAGTTGAAATTTTTTT+AGG | + | chr5_4:17074252-17074271 | None:intergenic | 20.0% |
| !! | GTTTCTTAGTTGAAAATATT+GGG | - | chr5_4:17074445-17074464 | Msa0841100:CDS | 20.0% |
| !!! | TCACTGTTATTTATTTCAAT+TGG | - | chr5_4:17074488-17074507 | Msa0841100:CDS | 20.0% |
| !!! | CACTGTTATTTATTTCAATT+GGG | - | chr5_4:17074489-17074508 | Msa0841100:CDS | 20.0% |
| !! | CAATTAACACAAATAACTAA+AGG | + | chr5_4:17074868-17074887 | None:intergenic | 20.0% |
| !!! | AGAAAAATCATTGTTTTGTA+AGG | - | chr5_4:17075053-17075072 | Msa0841100:CDS | 20.0% |
| !!! | TGTTTAAAAAGCATCAAAAT+TGG | + | chr5_4:17076173-17076192 | None:intergenic | 20.0% |
| !!! | AAATTTTTTTAGGGTTTAGA+GGG | + | chr5_4:17074242-17074261 | None:intergenic | 20.0% |
| !!! | GAATCAGTTGAAATTTTTTT+AGG | + | chr5_4:17074252-17074271 | None:intergenic | 20.0% |
| !! | GTTTCTTAGTTGAAAATATT+GGG | - | chr5_4:17074445-17074464 | Msa0841100:CDS | 20.0% |
| !!! | TCACTGTTATTTATTTCAAT+TGG | - | chr5_4:17074488-17074507 | Msa0841100:CDS | 20.0% |
| !!! | CACTGTTATTTATTTCAATT+GGG | - | chr5_4:17074489-17074508 | Msa0841100:CDS | 20.0% |
| !! | CAATTAACACAAATAACTAA+AGG | + | chr5_4:17074868-17074887 | None:intergenic | 20.0% |
| !!! | AGAAAAATCATTGTTTTGTA+AGG | - | chr5_4:17075053-17075072 | Msa0841100:CDS | 20.0% |
| !!! | TGTTTAAAAAGCATCAAAAT+TGG | + | chr5_4:17076173-17076192 | None:intergenic | 20.0% |
| ! | TGACAAAAACAAAACATAAG+AGG | - | chr5_4:17074150-17074169 | Msa0841100:three_prime_UTR | 25.0% |
| !!! | GAAATTTTTTTAGGGTTTAG+AGG | + | chr5_4:17074243-17074262 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTTGTTCTGAAT+AGG | - | chr5_4:17074423-17074442 | Msa0841100:CDS | 25.0% |
| ! | GGTTTCTTAGTTGAAAATAT+TGG | - | chr5_4:17074444-17074463 | Msa0841100:CDS | 25.0% |
| ! | AAATGTGAGATTGAATTTGA+TGG | - | chr5_4:17074622-17074641 | Msa0841100:CDS | 25.0% |
| ! | ATTGTAAACCTAATATGTTC+AGG | - | chr5_4:17074884-17074903 | Msa0841100:CDS | 25.0% |
| !! | TCTATTTTCCTGAACATATT+AGG | + | chr5_4:17074895-17074914 | None:intergenic | 25.0% |
| ! | GAGTCAAATAAACCAATATA+CGG | + | chr5_4:17074940-17074959 | None:intergenic | 25.0% |
| ! | GGTATTTGTATAGATTGAAA+TGG | - | chr5_4:17075121-17075140 | Msa0841100:CDS | 25.0% |
| ! | ATTTGTATAGATTGAAATGG+AGG | - | chr5_4:17075124-17075143 | Msa0841100:CDS | 25.0% |
| ! | GATGCTATATTAGATAAACT+TGG | - | chr5_4:17075281-17075300 | Msa0841100:intron | 25.0% |
| !! | TTAGTATCTCTTTTCTTTTG+CGG | + | chr5_4:17075869-17075888 | None:intergenic | 25.0% |
| !!! | GGTAAGTTGATAAACTTTAT+TGG | - | chr5_4:17076121-17076140 | Msa0841100:intron | 25.0% |
| ! | TGACAAAAACAAAACATAAG+AGG | - | chr5_4:17074150-17074169 | Msa0841100:three_prime_UTR | 25.0% |
| !!! | GAAATTTTTTTAGGGTTTAG+AGG | + | chr5_4:17074243-17074262 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTTGTTCTGAAT+AGG | - | chr5_4:17074423-17074442 | Msa0841100:CDS | 25.0% |
| ! | GGTTTCTTAGTTGAAAATAT+TGG | - | chr5_4:17074444-17074463 | Msa0841100:CDS | 25.0% |
| ! | AAATGTGAGATTGAATTTGA+TGG | - | chr5_4:17074622-17074641 | Msa0841100:CDS | 25.0% |
| ! | ATTGTAAACCTAATATGTTC+AGG | - | chr5_4:17074884-17074903 | Msa0841100:CDS | 25.0% |
| !! | TCTATTTTCCTGAACATATT+AGG | + | chr5_4:17074895-17074914 | None:intergenic | 25.0% |
| ! | GAGTCAAATAAACCAATATA+CGG | + | chr5_4:17074940-17074959 | None:intergenic | 25.0% |
| ! | GGTATTTGTATAGATTGAAA+TGG | - | chr5_4:17075121-17075140 | Msa0841100:CDS | 25.0% |
| ! | ATTTGTATAGATTGAAATGG+AGG | - | chr5_4:17075124-17075143 | Msa0841100:CDS | 25.0% |
| ! | GATGCTATATTAGATAAACT+TGG | - | chr5_4:17075281-17075300 | Msa0841100:intron | 25.0% |
| !! | TTAGTATCTCTTTTCTTTTG+CGG | + | chr5_4:17075869-17075888 | None:intergenic | 25.0% |
| !!! | GGTAAGTTGATAAACTTTAT+TGG | - | chr5_4:17076121-17076140 | Msa0841100:intron | 25.0% |
| AAACAAAACATAAGAGGACT+CGG | - | chr5_4:17074156-17074175 | Msa0841100:three_prime_UTR | 30.0% | |
| ! | AGGAAAATAAAGCTTTAGCA+AGG | + | chr5_4:17074307-17074326 | None:intergenic | 30.0% |
| ATTAACGCGAAAATACATAG+CGG | + | chr5_4:17074333-17074352 | None:intergenic | 30.0% | |
| CAACGATTGAGAAAAATTGT+GGG | - | chr5_4:17074653-17074672 | Msa0841100:CDS | 30.0% | |
| AACGATTGAGAAAAATTGTG+GGG | - | chr5_4:17074654-17074673 | Msa0841100:CDS | 30.0% | |
| ! | TCTTTTCGATGGAAAAAATG+TGG | - | chr5_4:17074720-17074739 | Msa0841100:CDS | 30.0% |
| TGGAAAAAATGTGGTTGAAA+AGG | - | chr5_4:17074729-17074748 | Msa0841100:CDS | 30.0% | |
| GGAAAAAATGTGGTTGAAAA+GGG | - | chr5_4:17074730-17074749 | Msa0841100:CDS | 30.0% | |
| ! | GATACATCACATTGATAACA+TGG | - | chr5_4:17074806-17074825 | Msa0841100:CDS | 30.0% |
| TCTTCTGAATCTGATTCAAA+CGG | + | chr5_4:17075215-17075234 | None:intergenic | 30.0% | |
| !!! | TTATTCACTGCAGTTTTAGA+TGG | + | chr5_4:17075257-17075276 | None:intergenic | 30.0% |
| TCTCCATTGATATTGATCAA+GGG | - | chr5_4:17075345-17075364 | Msa0841100:intron | 30.0% | |
| AGTCACAGAAATTGAAAGAA+AGG | - | chr5_4:17075630-17075649 | Msa0841100:intron | 30.0% | |
| GTCACAGAAATTGAAAGAAA+GGG | - | chr5_4:17075631-17075650 | Msa0841100:intron | 30.0% | |
| ACATTGAATCTGTTAAGAAG+TGG | - | chr5_4:17075672-17075691 | Msa0841100:intron | 30.0% | |
| GATACTAAGAATGCCAAATT+TGG | - | chr5_4:17075881-17075900 | Msa0841100:intron | 30.0% | |
| !! | AAGAATGCCAAATTTGGTTT+TGG | - | chr5_4:17075887-17075906 | Msa0841100:intron | 30.0% |
| ! | GCTGAAACAACTAATGATTT+TGG | - | chr5_4:17075941-17075960 | Msa0841100:intron | 30.0% |
| ! | GAAACAACTAATGATTTTGG+CGG | - | chr5_4:17075944-17075963 | Msa0841100:intron | 30.0% |
| !! | AAACAACTAATGATTTTGGC+GGG | - | chr5_4:17075945-17075964 | Msa0841100:intron | 30.0% |
| !!! | CTTGTTTTGTTTTCTCACAA+AGG | - | chr5_4:17076020-17076039 | Msa0841100:intron | 30.0% |
| CAACTTACCATGATCTAAAT+GGG | + | chr5_4:17076110-17076129 | None:intergenic | 30.0% | |
| TCAACTTACCATGATCTAAA+TGG | + | chr5_4:17076111-17076130 | None:intergenic | 30.0% | |
| AAACAAAACATAAGAGGACT+CGG | - | chr5_4:17074156-17074175 | Msa0841100:three_prime_UTR | 30.0% | |
| ! | AGGAAAATAAAGCTTTAGCA+AGG | + | chr5_4:17074307-17074326 | None:intergenic | 30.0% |
| ATTAACGCGAAAATACATAG+CGG | + | chr5_4:17074333-17074352 | None:intergenic | 30.0% | |
| CAACGATTGAGAAAAATTGT+GGG | - | chr5_4:17074653-17074672 | Msa0841100:CDS | 30.0% | |
| AACGATTGAGAAAAATTGTG+GGG | - | chr5_4:17074654-17074673 | Msa0841100:CDS | 30.0% | |
| ! | TCTTTTCGATGGAAAAAATG+TGG | - | chr5_4:17074720-17074739 | Msa0841100:CDS | 30.0% |
| TGGAAAAAATGTGGTTGAAA+AGG | - | chr5_4:17074729-17074748 | Msa0841100:CDS | 30.0% | |
| GGAAAAAATGTGGTTGAAAA+GGG | - | chr5_4:17074730-17074749 | Msa0841100:CDS | 30.0% | |
| ! | GATACATCACATTGATAACA+TGG | - | chr5_4:17074806-17074825 | Msa0841100:CDS | 30.0% |
| TCTTCTGAATCTGATTCAAA+CGG | + | chr5_4:17075215-17075234 | None:intergenic | 30.0% | |
| !!! | TTATTCACTGCAGTTTTAGA+TGG | + | chr5_4:17075257-17075276 | None:intergenic | 30.0% |
| TCTCCATTGATATTGATCAA+GGG | - | chr5_4:17075345-17075364 | Msa0841100:intron | 30.0% | |
| AGTCACAGAAATTGAAAGAA+AGG | - | chr5_4:17075630-17075649 | Msa0841100:intron | 30.0% | |
| GTCACAGAAATTGAAAGAAA+GGG | - | chr5_4:17075631-17075650 | Msa0841100:intron | 30.0% | |
| ACATTGAATCTGTTAAGAAG+TGG | - | chr5_4:17075672-17075691 | Msa0841100:intron | 30.0% | |
| GATACTAAGAATGCCAAATT+TGG | - | chr5_4:17075881-17075900 | Msa0841100:intron | 30.0% | |
| !! | AAGAATGCCAAATTTGGTTT+TGG | - | chr5_4:17075887-17075906 | Msa0841100:intron | 30.0% |
| ! | GCTGAAACAACTAATGATTT+TGG | - | chr5_4:17075941-17075960 | Msa0841100:intron | 30.0% |
| ! | GAAACAACTAATGATTTTGG+CGG | - | chr5_4:17075944-17075963 | Msa0841100:intron | 30.0% |
| !! | AAACAACTAATGATTTTGGC+GGG | - | chr5_4:17075945-17075964 | Msa0841100:intron | 30.0% |
| !!! | CTTGTTTTGTTTTCTCACAA+AGG | - | chr5_4:17076020-17076039 | Msa0841100:intron | 30.0% |
| CAACTTACCATGATCTAAAT+GGG | + | chr5_4:17076110-17076129 | None:intergenic | 30.0% | |
| TCAACTTACCATGATCTAAA+TGG | + | chr5_4:17076111-17076130 | None:intergenic | 30.0% | |
| AACAAAACATAAGAGGACTC+GGG | - | chr5_4:17074157-17074176 | Msa0841100:three_prime_UTR | 35.0% | |
| !!! | TTTTTTTAGGGTTTAGAGGG+AGG | + | chr5_4:17074239-17074258 | None:intergenic | 35.0% |
| ! | AACTTTTCCAACGTAGAACA+CGG | - | chr5_4:17074276-17074295 | Msa0841100:three_prime_UTR | 35.0% |
| ! | GTCATTGTTCTAAGTGAAAC+TGG | - | chr5_4:17074542-17074561 | Msa0841100:CDS | 35.0% |
| AAACCATTTCCGTTGCTTAA+GGG | + | chr5_4:17074576-17074595 | None:intergenic | 35.0% | |
| GCAACGATTGAGAAAAATTG+TGG | - | chr5_4:17074652-17074671 | Msa0841100:CDS | 35.0% | |
| TATCAATGTGATGTATCCAC+CGG | + | chr5_4:17074803-17074822 | None:intergenic | 35.0% | |
| ATAAACTTGGAGACATAAGC+TGG | - | chr5_4:17075294-17075313 | Msa0841100:intron | 35.0% | |
| CTCTCCATTGATATTGATCA+AGG | - | chr5_4:17075344-17075363 | Msa0841100:intron | 35.0% | |
| CTCCATTGATATTGATCAAG+GGG | - | chr5_4:17075346-17075365 | Msa0841100:intron | 35.0% | |
| TATTACGCAGAAATGGTGAA+GGG | - | chr5_4:17075494-17075513 | Msa0841100:intron | 35.0% | |
| ACATGGAAAAGGTGAAAAGT+CGG | - | chr5_4:17075525-17075544 | Msa0841100:intron | 35.0% | |
| AGCAAAGAGATTGTCTAAAG+AGG | - | chr5_4:17075604-17075623 | Msa0841100:intron | 35.0% | |
| ! | AATGTCATCCTTTTTCTGCT+TGG | + | chr5_4:17075657-17075676 | None:intergenic | 35.0% |
| TTGAATCTGTTAAGAAGTGG+AGG | - | chr5_4:17075675-17075694 | Msa0841100:intron | 35.0% | |
| TCAAAGCTCAAAGACTTATC+TGG | + | chr5_4:17075743-17075762 | None:intergenic | 35.0% | |
| AGATAAGTCTTTGAGCTTTG+AGG | - | chr5_4:17075742-17075761 | Msa0841100:intron | 35.0% | |
| TCGAGAGATCAAAGAAAAAG+AGG | - | chr5_4:17075777-17075796 | Msa0841100:intron | 35.0% | |
| !!! | AATGCCAAATTTGGTTTTGG+AGG | - | chr5_4:17075890-17075909 | Msa0841100:intron | 35.0% |
| TCTCTTTCCCATTTAGATCA+TGG | - | chr5_4:17076100-17076119 | Msa0841100:intron | 35.0% | |
| AACAAAACATAAGAGGACTC+GGG | - | chr5_4:17074157-17074176 | Msa0841100:three_prime_UTR | 35.0% | |
| !!! | TTTTTTTAGGGTTTAGAGGG+AGG | + | chr5_4:17074239-17074258 | None:intergenic | 35.0% |
| ! | AACTTTTCCAACGTAGAACA+CGG | - | chr5_4:17074276-17074295 | Msa0841100:three_prime_UTR | 35.0% |
| ! | GTCATTGTTCTAAGTGAAAC+TGG | - | chr5_4:17074542-17074561 | Msa0841100:CDS | 35.0% |
| AAACCATTTCCGTTGCTTAA+GGG | + | chr5_4:17074576-17074595 | None:intergenic | 35.0% | |
| GCAACGATTGAGAAAAATTG+TGG | - | chr5_4:17074652-17074671 | Msa0841100:CDS | 35.0% | |
| TATCAATGTGATGTATCCAC+CGG | + | chr5_4:17074803-17074822 | None:intergenic | 35.0% | |
| ATAAACTTGGAGACATAAGC+TGG | - | chr5_4:17075294-17075313 | Msa0841100:intron | 35.0% | |
| CTCTCCATTGATATTGATCA+AGG | - | chr5_4:17075344-17075363 | Msa0841100:intron | 35.0% | |
| CTCCATTGATATTGATCAAG+GGG | - | chr5_4:17075346-17075365 | Msa0841100:intron | 35.0% | |
| TATTACGCAGAAATGGTGAA+GGG | - | chr5_4:17075494-17075513 | Msa0841100:intron | 35.0% | |
| ACATGGAAAAGGTGAAAAGT+CGG | - | chr5_4:17075525-17075544 | Msa0841100:intron | 35.0% | |
| AGCAAAGAGATTGTCTAAAG+AGG | - | chr5_4:17075604-17075623 | Msa0841100:intron | 35.0% | |
| ! | AATGTCATCCTTTTTCTGCT+TGG | + | chr5_4:17075657-17075676 | None:intergenic | 35.0% |
| TTGAATCTGTTAAGAAGTGG+AGG | - | chr5_4:17075675-17075694 | Msa0841100:intron | 35.0% | |
| TCAAAGCTCAAAGACTTATC+TGG | + | chr5_4:17075743-17075762 | None:intergenic | 35.0% | |
| AGATAAGTCTTTGAGCTTTG+AGG | - | chr5_4:17075742-17075761 | Msa0841100:intron | 35.0% | |
| TCGAGAGATCAAAGAAAAAG+AGG | - | chr5_4:17075777-17075796 | Msa0841100:intron | 35.0% | |
| !!! | AATGCCAAATTTGGTTTTGG+AGG | - | chr5_4:17075890-17075909 | Msa0841100:intron | 35.0% |
| TCTCTTTCCCATTTAGATCA+TGG | - | chr5_4:17076100-17076119 | Msa0841100:intron | 35.0% | |
| ! | GCGAAAATACATAGCGGAAA+AGG | + | chr5_4:17074327-17074346 | None:intergenic | 40.0% |
| ! | GTTCTAAGTGAAACTGGACT+CGG | - | chr5_4:17074548-17074567 | Msa0841100:CDS | 40.0% |
| GAAACCATTTCCGTTGCTTA+AGG | + | chr5_4:17074577-17074596 | None:intergenic | 40.0% | |
| !! | GGGTAATGGATTCTCTCAAT+TGG | + | chr5_4:17074683-17074702 | None:intergenic | 40.0% |
| GAGACTTTGCTTAAGGGTAA+TGG | + | chr5_4:17074697-17074716 | None:intergenic | 40.0% | |
| AGACTCGAGACTTTGCTTAA+GGG | + | chr5_4:17074703-17074722 | None:intergenic | 40.0% | |
| AAGACTCGAGACTTTGCTTA+AGG | + | chr5_4:17074704-17074723 | None:intergenic | 40.0% | |
| ! | AAAGTCTCGAGTCTTTTCGA+TGG | - | chr5_4:17074709-17074728 | Msa0841100:CDS | 40.0% |
| GAAAAGGGAGATTCCACTAA+AGG | - | chr5_4:17074745-17074764 | Msa0841100:CDS | 40.0% | |
| TCCACTAAAGGTTGTAAGCT+AGG | - | chr5_4:17074757-17074776 | Msa0841100:CDS | 40.0% | |
| ACCTAGCTTACAACCTTTAG+TGG | + | chr5_4:17074761-17074780 | None:intergenic | 40.0% | |
| ! | AGGTTGTAAGCTAGGTTTTC+CGG | - | chr5_4:17074765-17074784 | Msa0841100:CDS | 40.0% |
| TGTGCTCTGTATCCGTATAT+TGG | - | chr5_4:17074925-17074944 | Msa0841100:CDS | 40.0% | |
| TAAAATATTCCCACGCCAGT+AGG | + | chr5_4:17075012-17075031 | None:intergenic | 40.0% | |
| ATTGGATCACCGTTAACCAA+AGG | + | chr5_4:17075152-17075171 | None:intergenic | 40.0% | |
| AACGGTGATCCAATGATTGA+CGG | - | chr5_4:17075158-17075177 | Msa0841100:CDS | 40.0% | |
| TCAGTTTCACCGTCAATCAT+TGG | + | chr5_4:17075170-17075189 | None:intergenic | 40.0% | |
| TGACGGTGAAACTGAAGATT+TGG | - | chr5_4:17075175-17075194 | Msa0841100:CDS | 40.0% | |
| TGAAACTGAAGATTTGGACG+AGG | - | chr5_4:17075181-17075200 | Msa0841100:CDS | 40.0% | |
| CTCCCCTTGATCAATATCAA+TGG | + | chr5_4:17075351-17075370 | None:intergenic | 40.0% | |
| CATTGATATTGATCAAGGGG+AGG | - | chr5_4:17075349-17075368 | Msa0841100:intron | 40.0% | |
| AGTAGATGTGAACGATGACT+TGG | - | chr5_4:17075373-17075392 | Msa0841100:intron | 40.0% | |
| ! | TGAGCTATCATTTTACACGC+AGG | - | chr5_4:17075400-17075419 | Msa0841100:intron | 40.0% |
| ! | ATCATTTTACACGCAGGCAT+TGG | - | chr5_4:17075406-17075425 | Msa0841100:intron | 40.0% |
| TTTGAGAAGCTTGAGTCGAT+GGG | - | chr5_4:17075446-17075465 | Msa0841100:intron | 40.0% | |
| ATTTCTGCGTAATAGTCAGC+AGG | + | chr5_4:17075488-17075507 | None:intergenic | 40.0% | |
| ! | TGCTGACTATTACGCAGAAA+TGG | - | chr5_4:17075487-17075506 | Msa0841100:intron | 40.0% |
| CTATTACGCAGAAATGGTGA+AGG | - | chr5_4:17075493-17075512 | Msa0841100:intron | 40.0% | |
| ! | GACTTTTCACCTTTTCCATG+TGG | + | chr5_4:17075526-17075545 | None:intergenic | 40.0% |
| ATTAGATGAGAAGCGGAAGA+TGG | - | chr5_4:17075550-17075569 | Msa0841100:intron | 40.0% | |
| ! | CAAAGACTTATCTGGAGCAT+CGG | + | chr5_4:17075735-17075754 | None:intergenic | 40.0% |
| !! | AAGTCTTTGAGCTTTGAGGA+TGG | - | chr5_4:17075746-17075765 | Msa0841100:intron | 40.0% |
| AGATCAAAGAAAAAGAGGCC+TGG | - | chr5_4:17075782-17075801 | Msa0841100:intron | 40.0% | |
| ! | GCGAAAATACATAGCGGAAA+AGG | + | chr5_4:17074327-17074346 | None:intergenic | 40.0% |
| ! | GTTCTAAGTGAAACTGGACT+CGG | - | chr5_4:17074548-17074567 | Msa0841100:CDS | 40.0% |
| GAAACCATTTCCGTTGCTTA+AGG | + | chr5_4:17074577-17074596 | None:intergenic | 40.0% | |
| !! | GGGTAATGGATTCTCTCAAT+TGG | + | chr5_4:17074683-17074702 | None:intergenic | 40.0% |
| GAGACTTTGCTTAAGGGTAA+TGG | + | chr5_4:17074697-17074716 | None:intergenic | 40.0% | |
| AGACTCGAGACTTTGCTTAA+GGG | + | chr5_4:17074703-17074722 | None:intergenic | 40.0% | |
| AAGACTCGAGACTTTGCTTA+AGG | + | chr5_4:17074704-17074723 | None:intergenic | 40.0% | |
| ! | AAAGTCTCGAGTCTTTTCGA+TGG | - | chr5_4:17074709-17074728 | Msa0841100:CDS | 40.0% |
| GAAAAGGGAGATTCCACTAA+AGG | - | chr5_4:17074745-17074764 | Msa0841100:CDS | 40.0% | |
| TCCACTAAAGGTTGTAAGCT+AGG | - | chr5_4:17074757-17074776 | Msa0841100:CDS | 40.0% | |
| ACCTAGCTTACAACCTTTAG+TGG | + | chr5_4:17074761-17074780 | None:intergenic | 40.0% | |
| ! | AGGTTGTAAGCTAGGTTTTC+CGG | - | chr5_4:17074765-17074784 | Msa0841100:CDS | 40.0% |
| TGTGCTCTGTATCCGTATAT+TGG | - | chr5_4:17074925-17074944 | Msa0841100:CDS | 40.0% | |
| TAAAATATTCCCACGCCAGT+AGG | + | chr5_4:17075012-17075031 | None:intergenic | 40.0% | |
| ATTGGATCACCGTTAACCAA+AGG | + | chr5_4:17075152-17075171 | None:intergenic | 40.0% | |
| AACGGTGATCCAATGATTGA+CGG | - | chr5_4:17075158-17075177 | Msa0841100:CDS | 40.0% | |
| TCAGTTTCACCGTCAATCAT+TGG | + | chr5_4:17075170-17075189 | None:intergenic | 40.0% | |
| TGACGGTGAAACTGAAGATT+TGG | - | chr5_4:17075175-17075194 | Msa0841100:CDS | 40.0% | |
| TGAAACTGAAGATTTGGACG+AGG | - | chr5_4:17075181-17075200 | Msa0841100:CDS | 40.0% | |
| CTCCCCTTGATCAATATCAA+TGG | + | chr5_4:17075351-17075370 | None:intergenic | 40.0% | |
| CATTGATATTGATCAAGGGG+AGG | - | chr5_4:17075349-17075368 | Msa0841100:intron | 40.0% | |
| AGTAGATGTGAACGATGACT+TGG | - | chr5_4:17075373-17075392 | Msa0841100:intron | 40.0% | |
| ! | TGAGCTATCATTTTACACGC+AGG | - | chr5_4:17075400-17075419 | Msa0841100:intron | 40.0% |
| ! | ATCATTTTACACGCAGGCAT+TGG | - | chr5_4:17075406-17075425 | Msa0841100:intron | 40.0% |
| TTTGAGAAGCTTGAGTCGAT+GGG | - | chr5_4:17075446-17075465 | Msa0841100:intron | 40.0% | |
| ATTTCTGCGTAATAGTCAGC+AGG | + | chr5_4:17075488-17075507 | None:intergenic | 40.0% | |
| ! | TGCTGACTATTACGCAGAAA+TGG | - | chr5_4:17075487-17075506 | Msa0841100:intron | 40.0% |
| CTATTACGCAGAAATGGTGA+AGG | - | chr5_4:17075493-17075512 | Msa0841100:intron | 40.0% | |
| ! | GACTTTTCACCTTTTCCATG+TGG | + | chr5_4:17075526-17075545 | None:intergenic | 40.0% |
| ATTAGATGAGAAGCGGAAGA+TGG | - | chr5_4:17075550-17075569 | Msa0841100:intron | 40.0% | |
| ! | CAAAGACTTATCTGGAGCAT+CGG | + | chr5_4:17075735-17075754 | None:intergenic | 40.0% |
| !! | AAGTCTTTGAGCTTTGAGGA+TGG | - | chr5_4:17075746-17075765 | Msa0841100:intron | 40.0% |
| AGATCAAAGAAAAAGAGGCC+TGG | - | chr5_4:17075782-17075801 | Msa0841100:intron | 40.0% | |
| GTTTAGAGGGAGGTTTAAGG+AGG | + | chr5_4:17074229-17074248 | None:intergenic | 45.0% | |
| AGGGTTTAGAGGGAGGTTTA+AGG | + | chr5_4:17074232-17074251 | None:intergenic | 45.0% | |
| GATCCCTTAAGCAACGGAAA+TGG | - | chr5_4:17074570-17074589 | Msa0841100:CDS | 45.0% | |
| !! | GATTGAAATGGAGGTGCCTT+TGG | - | chr5_4:17075133-17075152 | Msa0841100:CDS | 45.0% |
| !! | ATGGAGGTGCCTTTGGTTAA+CGG | - | chr5_4:17075140-17075159 | Msa0841100:CDS | 45.0% |
| TGCTTCCAATCCACATTCTC+AGG | + | chr5_4:17075320-17075339 | None:intergenic | 45.0% | |
| !!! | ATTTTACACGCAGGCATTGG+AGG | - | chr5_4:17075409-17075428 | Msa0841100:intron | 45.0% |
| !!! | TTTTACACGCAGGCATTGGA+GGG | - | chr5_4:17075410-17075429 | Msa0841100:intron | 45.0% |
| !! | CATCGACTCAAGCTTCTCAA+AGG | + | chr5_4:17075447-17075466 | None:intergenic | 45.0% |
| ! | CTTTGAGAAGCTTGAGTCGA+TGG | - | chr5_4:17075445-17075464 | Msa0841100:intron | 45.0% |
| AGTCAGCAGGTCTCAAGAAA+GGG | + | chr5_4:17075475-17075494 | None:intergenic | 45.0% | |
| TAGTCAGCAGGTCTCAAGAA+AGG | + | chr5_4:17075476-17075495 | None:intergenic | 45.0% | |
| GTCGGCTATTAGATGAGAAG+CGG | - | chr5_4:17075543-17075562 | Msa0841100:intron | 45.0% | |
| TGAAGAGAGAAGAAAGGCCA+GGG | - | chr5_4:17075580-17075599 | Msa0841100:intron | 45.0% | |
| AGACAATCTCTTTGCTTCCC+TGG | + | chr5_4:17075600-17075619 | None:intergenic | 45.0% | |
| AGAAAGGGCCAAGCAGAAAA+AGG | - | chr5_4:17075646-17075665 | Msa0841100:intron | 45.0% | |
| AGGTAAGGCAAAGCAAGCTA+TGG | - | chr5_4:17075829-17075848 | Msa0841100:intron | 45.0% | |
| GGTAAGGCAAAGCAAGCTAT+GGG | - | chr5_4:17075830-17075849 | Msa0841100:intron | 45.0% | |
| GCAAAGCAAGCTATGGGAAA+GGG | - | chr5_4:17075836-17075855 | Msa0841100:intron | 45.0% | |
| !!! | CCAAATTTGGTTTTGGAGGC+CGG | - | chr5_4:17075894-17075913 | Msa0841100:intron | 45.0% |
| TCTGCTTCTTTGATCCCTTC+CGG | + | chr5_4:17075916-17075935 | None:intergenic | 45.0% | |
| !!! | TGATTTTGGCGGGTTCAGTA+AGG | - | chr5_4:17075955-17075974 | Msa0841100:intron | 45.0% |
| !!! | GATTTTGGCGGGTTCAGTAA+GGG | - | chr5_4:17075956-17075975 | Msa0841100:intron | 45.0% |
| ! | TTTCTCACAAAGGCGTGTCA+TGG | - | chr5_4:17076030-17076049 | Msa0841100:intron | 45.0% |
| TGTCTCTACTAACACAGGCT+TGG | + | chr5_4:17076250-17076269 | None:intergenic | 45.0% | |
| GTTTAGAGGGAGGTTTAAGG+AGG | + | chr5_4:17074229-17074248 | None:intergenic | 45.0% | |
| AGGGTTTAGAGGGAGGTTTA+AGG | + | chr5_4:17074232-17074251 | None:intergenic | 45.0% | |
| GATCCCTTAAGCAACGGAAA+TGG | - | chr5_4:17074570-17074589 | Msa0841100:CDS | 45.0% | |
| !! | GATTGAAATGGAGGTGCCTT+TGG | - | chr5_4:17075133-17075152 | Msa0841100:CDS | 45.0% |
| !! | ATGGAGGTGCCTTTGGTTAA+CGG | - | chr5_4:17075140-17075159 | Msa0841100:CDS | 45.0% |
| TGCTTCCAATCCACATTCTC+AGG | + | chr5_4:17075320-17075339 | None:intergenic | 45.0% | |
| !!! | ATTTTACACGCAGGCATTGG+AGG | - | chr5_4:17075409-17075428 | Msa0841100:intron | 45.0% |
| !!! | TTTTACACGCAGGCATTGGA+GGG | - | chr5_4:17075410-17075429 | Msa0841100:intron | 45.0% |
| !! | CATCGACTCAAGCTTCTCAA+AGG | + | chr5_4:17075447-17075466 | None:intergenic | 45.0% |
| ! | CTTTGAGAAGCTTGAGTCGA+TGG | - | chr5_4:17075445-17075464 | Msa0841100:intron | 45.0% |
| AGTCAGCAGGTCTCAAGAAA+GGG | + | chr5_4:17075475-17075494 | None:intergenic | 45.0% | |
| TAGTCAGCAGGTCTCAAGAA+AGG | + | chr5_4:17075476-17075495 | None:intergenic | 45.0% | |
| GTCGGCTATTAGATGAGAAG+CGG | - | chr5_4:17075543-17075562 | Msa0841100:intron | 45.0% | |
| TGAAGAGAGAAGAAAGGCCA+GGG | - | chr5_4:17075580-17075599 | Msa0841100:intron | 45.0% | |
| AGACAATCTCTTTGCTTCCC+TGG | + | chr5_4:17075600-17075619 | None:intergenic | 45.0% | |
| AGAAAGGGCCAAGCAGAAAA+AGG | - | chr5_4:17075646-17075665 | Msa0841100:intron | 45.0% | |
| AGGTAAGGCAAAGCAAGCTA+TGG | - | chr5_4:17075829-17075848 | Msa0841100:intron | 45.0% | |
| GGTAAGGCAAAGCAAGCTAT+GGG | - | chr5_4:17075830-17075849 | Msa0841100:intron | 45.0% | |
| GCAAAGCAAGCTATGGGAAA+GGG | - | chr5_4:17075836-17075855 | Msa0841100:intron | 45.0% | |
| !!! | CCAAATTTGGTTTTGGAGGC+CGG | - | chr5_4:17075894-17075913 | Msa0841100:intron | 45.0% |
| TCTGCTTCTTTGATCCCTTC+CGG | + | chr5_4:17075916-17075935 | None:intergenic | 45.0% | |
| !!! | TGATTTTGGCGGGTTCAGTA+AGG | - | chr5_4:17075955-17075974 | Msa0841100:intron | 45.0% |
| !!! | GATTTTGGCGGGTTCAGTAA+GGG | - | chr5_4:17075956-17075975 | Msa0841100:intron | 45.0% |
| ! | TTTCTCACAAAGGCGTGTCA+TGG | - | chr5_4:17076030-17076049 | Msa0841100:intron | 45.0% |
| TGTCTCTACTAACACAGGCT+TGG | + | chr5_4:17076250-17076269 | None:intergenic | 45.0% | |
| GCTGGAACAGACAACGTTTG+TGG | + | chr5_4:17074202-17074221 | None:intergenic | 50.0% | |
| GACTCGGATCCCTTAAGCAA+CGG | - | chr5_4:17074564-17074583 | Msa0841100:CDS | 50.0% | |
| TTTCCGGCCAAGAGTAATGC+CGG | - | chr5_4:17074781-17074800 | Msa0841100:CDS | 50.0% | |
| GTATCCACCGGCATTACTCT+TGG | + | chr5_4:17074791-17074810 | None:intergenic | 50.0% | |
| GTTGCCTATTCTCCACCTAC+TGG | - | chr5_4:17074994-17075013 | Msa0841100:CDS | 50.0% | |
| TATTCTCCACCTACTGGCGT+GGG | - | chr5_4:17075000-17075019 | Msa0841100:CDS | 50.0% | |
| AATATTCCCACGCCAGTAGG+TGG | + | chr5_4:17075009-17075028 | None:intergenic | 50.0% | |
| ! | CATAAGCTGGCCTGAGAATG+TGG | - | chr5_4:17075307-17075326 | Msa0841100:intron | 50.0% |
| GGGAGATAGCCACATGGAAA+AGG | - | chr5_4:17075514-17075533 | Msa0841100:intron | 50.0% | |
| AGATGAGAAGCGGAAGATGG+AGG | - | chr5_4:17075553-17075572 | Msa0841100:intron | 50.0% | |
| GGAGGCTGAAGAGAGAAGAA+AGG | - | chr5_4:17075574-17075593 | Msa0841100:intron | 50.0% | |
| CTGAAGAGAGAAGAAAGGCC+AGG | - | chr5_4:17075579-17075598 | Msa0841100:intron | 50.0% | |
| AGGAAGCAGAGACAACAGAG+TGG | - | chr5_4:17075695-17075714 | Msa0841100:intron | 50.0% | |
| GGAAGCAGAGACAACAGAGT+GGG | - | chr5_4:17075696-17075715 | Msa0841100:intron | 50.0% | |
| !! | CAACAGAGTGGGTTTGCTGA+TGG | - | chr5_4:17075707-17075726 | Msa0841100:intron | 50.0% |
| ! | CTGGAGTATCTCCAGGAGAT+CGG | - | chr5_4:17075801-17075820 | Msa0841100:intron | 50.0% |
| GGCAAAGCAAGCTATGGGAA+AGG | - | chr5_4:17075835-17075854 | Msa0841100:intron | 50.0% | |
| CCGGCCTCCAAAACCAAATT+TGG | + | chr5_4:17075897-17075916 | None:intergenic | 50.0% | |
| !!! | ATTTGGTTTTGGAGGCCGGA+AGG | - | chr5_4:17075898-17075917 | Msa0841100:intron | 50.0% |
| !!! | TTTGGTTTTGGAGGCCGGAA+GGG | - | chr5_4:17075899-17075918 | Msa0841100:intron | 50.0% |
| TTCAGTAAGGGTTCTGCTGC+TGG | - | chr5_4:17075968-17075987 | Msa0841100:intron | 50.0% | |
| ! | CAAAGGCGTGTCATGGAATG+CGG | - | chr5_4:17076037-17076056 | Msa0841100:intron | 50.0% |
| AATGCGGCTATGGCACAATC+TGG | - | chr5_4:17076053-17076072 | Msa0841100:intron | 50.0% | |
| GCTGGAACAGACAACGTTTG+TGG | + | chr5_4:17074202-17074221 | None:intergenic | 50.0% | |
| GACTCGGATCCCTTAAGCAA+CGG | - | chr5_4:17074564-17074583 | Msa0841100:CDS | 50.0% | |
| TTTCCGGCCAAGAGTAATGC+CGG | - | chr5_4:17074781-17074800 | Msa0841100:CDS | 50.0% | |
| GTATCCACCGGCATTACTCT+TGG | + | chr5_4:17074791-17074810 | None:intergenic | 50.0% | |
| GTTGCCTATTCTCCACCTAC+TGG | - | chr5_4:17074994-17075013 | Msa0841100:CDS | 50.0% | |
| TATTCTCCACCTACTGGCGT+GGG | - | chr5_4:17075000-17075019 | Msa0841100:CDS | 50.0% | |
| AATATTCCCACGCCAGTAGG+TGG | + | chr5_4:17075009-17075028 | None:intergenic | 50.0% | |
| ! | CATAAGCTGGCCTGAGAATG+TGG | - | chr5_4:17075307-17075326 | Msa0841100:intron | 50.0% |
| GGGAGATAGCCACATGGAAA+AGG | - | chr5_4:17075514-17075533 | Msa0841100:intron | 50.0% | |
| AGATGAGAAGCGGAAGATGG+AGG | - | chr5_4:17075553-17075572 | Msa0841100:intron | 50.0% | |
| GGAGGCTGAAGAGAGAAGAA+AGG | - | chr5_4:17075574-17075593 | Msa0841100:intron | 50.0% | |
| CTGAAGAGAGAAGAAAGGCC+AGG | - | chr5_4:17075579-17075598 | Msa0841100:intron | 50.0% | |
| AGGAAGCAGAGACAACAGAG+TGG | - | chr5_4:17075695-17075714 | Msa0841100:intron | 50.0% | |
| GGAAGCAGAGACAACAGAGT+GGG | - | chr5_4:17075696-17075715 | Msa0841100:intron | 50.0% | |
| !! | CAACAGAGTGGGTTTGCTGA+TGG | - | chr5_4:17075707-17075726 | Msa0841100:intron | 50.0% |
| ! | CTGGAGTATCTCCAGGAGAT+CGG | - | chr5_4:17075801-17075820 | Msa0841100:intron | 50.0% |
| GGCAAAGCAAGCTATGGGAA+AGG | - | chr5_4:17075835-17075854 | Msa0841100:intron | 50.0% | |
| CCGGCCTCCAAAACCAAATT+TGG | + | chr5_4:17075897-17075916 | None:intergenic | 50.0% | |
| !!! | ATTTGGTTTTGGAGGCCGGA+AGG | - | chr5_4:17075898-17075917 | Msa0841100:intron | 50.0% |
| !!! | TTTGGTTTTGGAGGCCGGAA+GGG | - | chr5_4:17075899-17075918 | Msa0841100:intron | 50.0% |
| TTCAGTAAGGGTTCTGCTGC+TGG | - | chr5_4:17075968-17075987 | Msa0841100:intron | 50.0% | |
| ! | CAAAGGCGTGTCATGGAATG+CGG | - | chr5_4:17076037-17076056 | Msa0841100:intron | 50.0% |
| AATGCGGCTATGGCACAATC+TGG | - | chr5_4:17076053-17076072 | Msa0841100:intron | 50.0% | |
| GAGGTTTAAGGAGGCAGAGC+TGG | + | chr5_4:17074220-17074239 | None:intergenic | 55.0% | |
| GGACTCACCGTGTTCTACGT+TGG | + | chr5_4:17074286-17074305 | None:intergenic | 55.0% | |
| CACGCCAGTAGGTGGAGAAT+AGG | + | chr5_4:17075001-17075020 | None:intergenic | 55.0% | |
| CTATTCTCCACCTACTGGCG+TGG | - | chr5_4:17074999-17075018 | Msa0841100:CDS | 55.0% | |
| ! | GCTGGCCTGAGAATGTGGAT+TGG | - | chr5_4:17075312-17075331 | Msa0841100:intron | 55.0% |
| ! | GGCATTGGAGGGAACTAGAC+AGG | - | chr5_4:17075421-17075440 | Msa0841100:intron | 55.0% |
| GGTGAAGGGAGATAGCCACA+TGG | - | chr5_4:17075508-17075527 | Msa0841100:intron | 55.0% | |
| TGAGAAGCGGAAGATGGAGG+AGG | - | chr5_4:17075556-17075575 | Msa0841100:intron | 55.0% | |
| ! | AAGAGGCCTGGAGTATCTCC+AGG | - | chr5_4:17075794-17075813 | Msa0841100:intron | 55.0% |
| CGATCTCCTGGAGATACTCC+AGG | + | chr5_4:17075803-17075822 | None:intergenic | 55.0% | |
| GTATCTCCAGGAGATCGGTC+AGG | - | chr5_4:17075806-17075825 | Msa0841100:intron | 55.0% | |
| TTACCTCCTGACCGATCTCC+TGG | + | chr5_4:17075815-17075834 | None:intergenic | 55.0% | |
| AGGAGATCGGTCAGGAGGTA+AGG | - | chr5_4:17075814-17075833 | Msa0841100:intron | 55.0% | |
| CGTGTCATGGAATGCGGCTA+TGG | - | chr5_4:17076043-17076062 | Msa0841100:intron | 55.0% | |
| GAGGTTTAAGGAGGCAGAGC+TGG | + | chr5_4:17074220-17074239 | None:intergenic | 55.0% | |
| GGACTCACCGTGTTCTACGT+TGG | + | chr5_4:17074286-17074305 | None:intergenic | 55.0% | |
| CACGCCAGTAGGTGGAGAAT+AGG | + | chr5_4:17075001-17075020 | None:intergenic | 55.0% | |
| CTATTCTCCACCTACTGGCG+TGG | - | chr5_4:17074999-17075018 | Msa0841100:CDS | 55.0% | |
| ! | GCTGGCCTGAGAATGTGGAT+TGG | - | chr5_4:17075312-17075331 | Msa0841100:intron | 55.0% |
| ! | GGCATTGGAGGGAACTAGAC+AGG | - | chr5_4:17075421-17075440 | Msa0841100:intron | 55.0% |
| GGTGAAGGGAGATAGCCACA+TGG | - | chr5_4:17075508-17075527 | Msa0841100:intron | 55.0% | |
| TGAGAAGCGGAAGATGGAGG+AGG | - | chr5_4:17075556-17075575 | Msa0841100:intron | 55.0% | |
| ! | AAGAGGCCTGGAGTATCTCC+AGG | - | chr5_4:17075794-17075813 | Msa0841100:intron | 55.0% |
| CGATCTCCTGGAGATACTCC+AGG | + | chr5_4:17075803-17075822 | None:intergenic | 55.0% | |
| GTATCTCCAGGAGATCGGTC+AGG | - | chr5_4:17075806-17075825 | Msa0841100:intron | 55.0% | |
| TTACCTCCTGACCGATCTCC+TGG | + | chr5_4:17075815-17075834 | None:intergenic | 55.0% | |
| AGGAGATCGGTCAGGAGGTA+AGG | - | chr5_4:17075814-17075833 | Msa0841100:intron | 55.0% | |
| CGTGTCATGGAATGCGGCTA+TGG | - | chr5_4:17076043-17076062 | Msa0841100:intron | 55.0% | |
| CCACCGGCATTACTCTTGGC+CGG | + | chr5_4:17074787-17074806 | None:intergenic | 60.0% | |
| TCTCCAGGAGATCGGTCAGG+AGG | - | chr5_4:17075809-17075828 | Msa0841100:intron | 60.0% | |
| CCACCGGCATTACTCTTGGC+CGG | + | chr5_4:17074787-17074806 | None:intergenic | 60.0% | |
| TCTCCAGGAGATCGGTCAGG+AGG | - | chr5_4:17075809-17075828 | Msa0841100:intron | 60.0% | |
| CCGGCCAAGAGTAATGCCGG+TGG | - | chr5_4:17074784-17074803 | Msa0841100:CDS | 65.0% | |
| CCGGCCAAGAGTAATGCCGG+TGG | - | chr5_4:17074784-17074803 | Msa0841100:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 17074149 | 17076271 | 17074149 | ID=Msa0841100;Name=Msa0841100 |
| chr5_4 | mRNA | 17074149 | 17076271 | 17074149 | ID=Msa0841100-mRNA-1;Parent=Msa0841100;Name=Msa0841100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0.5|0.5|1|1|2|259|302 |
| chr5_4 | exon | 17074149 | 17075286 | 17074149 | ID=Msa0841100-mRNA-1:exon:7331;Parent=Msa0841100-mRNA-1 |
| chr5_4 | exon | 17076242 | 17076271 | 17076242 | ID=Msa0841100-mRNA-1:exon:7330;Parent=Msa0841100-mRNA-1 |
| chr5_4 | CDS | 17076242 | 17076271 | 17076242 | ID=Msa0841100-mRNA-1:cds;Parent=Msa0841100-mRNA-1 |
| chr5_4 | CDS | 17074408 | 17075286 | 17074408 | ID=Msa0841100-mRNA-1:cds;Parent=Msa0841100-mRNA-1 |
| chr5_4 | three_prime_UTR | 17074149 | 17074407 | 17074149 | ID=Msa0841100-mRNA-1:three_prime_utr;Parent=Msa0841100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
