AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1181250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181250 MtrunA17_Chr8g0336421 84.422 398 59 2 203 599 1 396 0.0 693
Msa1181250 MtrunA17_Chr8g0336421 66.234 77 25 1 731 806 384 460 1.73e-21 99.4
Msa1181250 MtrunA17_Chr8g0336421 33.908 174 104 3 89 253 2 173 2.81e-21 98.6
Msa1181250 MtrunA17_Chr8g0339141 74.112 394 85 7 1 382 1 389 9.41e-172 516
Msa1181250 MtrunA17_Chr7g0234801 66.062 386 110 8 1 382 13 381 2.77e-158 479
Msa1181250 MtrunA17_Chr8g0352971 71.098 346 80 8 47 383 14 348 9.15e-153 461
Msa1181250 MtrunA17_Chr8g0352971 35.622 233 141 4 30 257 118 346 5.85e-29 121
Msa1181250 MtrunA17_Chr8g0377771 59.694 392 141 8 1 382 1 385 1.71e-147 452
Msa1181250 MtrunA17_Chr8g0352961 56.678 307 118 4 748 1043 3 305 1.64e-103 327
Msa1181250 MtrunA17_Chr7g0255551 48.045 358 171 7 26 379 15 361 1.03e-91 303
Msa1181250 MtrunA17_Chr8g0338001 61.390 259 91 6 127 382 43 295 7.18e-89 291
Msa1181250 MtrunA17_Chr8g0338001 32.308 260 157 8 16 261 44 298 1.41e-20 95.9
Msa1181250 MtrunA17_Chr8g0338221 47.697 304 85 11 106 368 12 282 3.29e-66 224
Msa1181250 MtrunA17_Chr8g0338221 32.164 171 92 6 80 244 130 282 3.13e-14 74.7
Msa1181250 MtrunA17_Chr1g0152361 47.573 206 103 3 175 379 10 211 8.90e-50 181
Msa1181250 MtrunA17_Chr1g0152361 30.052 193 120 5 71 253 22 209 1.06e-17 86.7
Msa1181250 MtrunA17_Chr8g0345571 53.552 183 49 6 166 319 10 185 4.62e-45 161
Msa1181250 MtrunA17_Chr8g0338181 69.565 115 32 2 269 382 2 114 1.57e-42 152
Msa1181250 MtrunA17_Chr8g0338181 35.088 114 64 2 37 140 2 115 2.88e-11 62.8
Msa1181250 MtrunA17_Chr8g0336431 82.759 87 15 0 862 948 15 101 4.04e-41 146
Msa1181250 MtrunA17_Chr8g0338191 46.914 162 48 4 129 254 30 189 1.17e-33 128
Msa1181250 MtrunA17_Chr1g0152351 42.949 156 78 4 22 172 52 201 3.86e-32 124
Msa1181250 MtrunA17_Chr1g0152351 37.681 138 70 4 148 281 66 191 3.80e-18 84.3
Msa1181250 MtrunA17_Chr8g0339161 37.915 211 46 7 93 244 1 185 4.45e-26 108
Msa1181250 MtrunA17_Chr4g0027201 26.750 400 242 13 24 396 27 402 1.90e-25 112
Msa1181250 MtrunA17_Chr8g0352981 53.333 90 37 2 650 738 1 86 1.39e-20 87.4
Msa1181250 MtrunA17_Chr8g0338661 80.392 51 10 0 332 382 1 51 3.55e-19 83.6
Msa1181250 MtrunA17_Chr8g0338061 78.431 51 11 0 332 382 1 51 3.91e-19 83.6
Msa1181250 MtrunA17_Chr8g0338631 77.551 49 11 0 334 382 1 49 2.00e-17 80.1
Msa1181250 MtrunA17_Chr4g0035371 25.385 260 157 7 478 736 96 319 8.27e-17 83.2
Msa1181250 MtrunA17_Chr8g0380881 26.761 213 136 4 524 736 15 207 4.32e-16 82.4
Msa1181250 MtrunA17_Chr8g0378271 32.886 149 91 4 896 1041 2610 2752 4.56e-12 70.9
Msa1181250 MtrunA17_Chr5g0435521 30.137 146 87 4 139 274 6 146 2.38e-11 63.9
Msa1181250 MtrunA17_Chr5g0435521 37.931 116 56 4 29 133 9 119 5.54e-11 62.8
Msa1181250 MtrunA17_Chr2g0279511 36.364 110 61 4 32 133 2 110 4.37e-11 61.2
Msa1181250 MtrunA17_Chr1g0179681 38.938 113 55 4 32 133 133 242 4.55e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181250 AT3G25230.1 59.497 437 155 10 19 447 27 449 3.92e-152 464
Msa1181250 AT3G25230.2 59.497 437 155 10 19 447 27 449 7.48e-152 464
Msa1181250 AT5G48570.1 63.874 382 125 10 7 382 23 397 6.74e-151 462
Msa1181250 AT3G54010.1 26.344 372 242 10 24 377 25 382 1.08e-23 107
Msa1181250 AT3G54010.2 26.471 306 201 9 82 377 1 292 2.11e-19 94.0
Msa1181250 AT3G54010.2 27.668 253 143 7 30 260 65 299 3.89e-13 73.9
Msa1181250 AT3G10060.1 41.228 114 51 6 32 133 106 215 1.62e-11 65.9

Find 221 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGAGGCACACTTGTT+TGG 0.180375 8_1:+15540666 None:intergenic
GATGCCATGGATCTTTATTT+TGG 0.195786 8_1:-15541958 Msa1181250:CDS
CATAAATCCTGATTTCAATT+TGG 0.226535 8_1:-15540306 Msa1181250:CDS
TTGTCACCTCATATTTCTTT+AGG 0.227122 8_1:-15540882 Msa1181250:intron
TTTGTAATTTCTAATGAAAA+TGG 0.234169 8_1:+15542109 None:intergenic
AAGGGGAGGTGAGAAAATTT+AGG 0.234931 8_1:-15539701 Msa1181250:exon
TTTCTATCACAGGCAATTAA+TGG 0.236094 8_1:-15541998 Msa1181250:intron
TTATGTGTAGTTCATCTTAC+TGG 0.238754 8_1:-15544118 Msa1181250:intron
TTCTTGAGGCACACTTGTTT+GGG 0.250988 8_1:+15540667 None:intergenic
CCTTTCATTGACTTACAAAA+TGG 0.261643 8_1:-15541501 Msa1181250:CDS
TTGAGCAGAAACGAGGGTTT+AGG 0.262187 8_1:+15544464 None:intergenic
TGAAGGTTTCGCCTCTTTCT+TGG 0.264803 8_1:+15539784 None:intergenic
CTGATTTCAATTTGGATGTC+TGG 0.269343 8_1:-15540298 Msa1181250:CDS
GCAAAGATTTCAGCTCTTCT+TGG 0.278062 8_1:-15540443 Msa1181250:CDS
TTTGCAGGGCATGTTGTTAA+AGG 0.282244 8_1:-15543646 Msa1181250:intron
TTTACATCAGCTCCATCTTT+TGG 0.285771 8_1:+15542760 None:intergenic
TTGACTATTGCACCTAAGTA+TGG 0.295366 8_1:-15542380 Msa1181250:CDS
CTCATCTCCGTATTCTTTCA+TGG 0.313803 8_1:-15544383 Msa1181250:exon
GCGGCCAAATGTATCTCATT+AGG 0.325000 8_1:+15539926 None:intergenic
ATTGCACCTAAGTATGGTTT+TGG 0.326379 8_1:-15542374 Msa1181250:CDS
TAATGTAAGGTTGAATTTGC+AGG 0.335084 8_1:+15542317 None:intergenic
GCATTAGGAGGAATCTGTTT+TGG 0.336181 8_1:+15543532 None:intergenic
CTGGTATACCGGAGAAGTTC+TGG 0.340430 8_1:-15539961 Msa1181250:CDS
TAAAACTTGAGTTAATTTCT+TGG 0.342019 8_1:-15542858 Msa1181250:CDS
GTATAGTGTAGTGTTCATTA+AGG 0.349583 8_1:-15539888 Msa1181250:CDS
AAAGATGGAGCTGATGTAAA+AGG 0.349633 8_1:-15542757 Msa1181250:intron
TTCTCACCTCCCCTTGATAA+AGG 0.350633 8_1:+15539709 None:intergenic
TCCTGACCGACCACGAGAAT+TGG 0.351199 8_1:+15544313 None:intergenic
ATCCGAGTCTCGGCAGGAAT+TGG 0.367014 8_1:-15542348 Msa1181250:CDS
GATATTCCGGAGGATGATTC+CGG 0.369673 8_1:-15544349 Msa1181250:CDS
AGGGGAGGTGAGAAAATTTA+GGG 0.371878 8_1:-15539700 Msa1181250:exon
TGAGCAGAAACGAGGGTTTA+GGG 0.378493 8_1:+15544465 None:intergenic
AAATTCAACCTTACATTATG+AGG 0.380710 8_1:-15542312 Msa1181250:CDS
CCTTGATAAAGGCAGCTTCC+TGG 0.385087 8_1:+15539720 None:intergenic
GATGACTGTCGCCGAAGTTA+AGG 0.385941 8_1:-15539756 Msa1181250:CDS
AAATTCAGGTGCAAGCGATT+AGG 0.389351 8_1:-15541633 Msa1181250:intron
ATGATGTTGAGCTACTTTCT+TGG 0.389571 8_1:-15543498 Msa1181250:CDS
GGACGAAGATTTCGATATTC+CGG 0.390284 8_1:-15544362 Msa1181250:CDS
GAAAAGGAAATCGGTGATAA+AGG 0.391222 8_1:-15544292 Msa1181250:CDS
TCCAATTCTCGTGGTCGGTC+AGG 0.397115 8_1:-15544314 Msa1181250:CDS
ATCTCTAATATTGCATTAGC+TGG 0.406995 8_1:+15542880 None:intergenic
TAAAAGATCCATTGTCAAAA+GGG 0.409120 8_1:-15539832 Msa1181250:CDS
AAGGCAGTGGCACGAGTAAA+GGG 0.411312 8_1:-15540706 Msa1181250:CDS
TTGTAATTTCTAATGAAAAT+GGG 0.414758 8_1:+15542110 None:intergenic
ATGGTGAGTTTCAGCTGAAA+AGG 0.416213 8_1:-15541038 Msa1181250:CDS
GTATATCTTTCCCTTTGAAA+AGG 0.420596 8_1:+15540008 None:intergenic
AAAGGCAGTGGCACGAGTAA+AGG 0.422593 8_1:-15540707 Msa1181250:CDS
GAGTTAGCTTACGGTGGATC+TGG 0.427641 8_1:-15543562 Msa1181250:CDS
CGTGCCACTGCCTTTAGATC+TGG 0.428247 8_1:+15540715 None:intergenic
AGGGCATGTTGTTAAAGGTT+TGG 0.430416 8_1:-15543641 Msa1181250:CDS
TAAAACTTCGTCGAGATCCT+TGG 0.432037 8_1:+15543399 None:intergenic
AACTGATAGCTTCACTTTGT+GGG 0.433097 8_1:+15542151 None:intergenic
CAGACATCCAAATTGAAATC+AGG 0.434061 8_1:+15540299 None:intergenic
ATGAATTGGAAAGAAGGAAA+TGG 0.437478 8_1:+15544412 None:intergenic
ATAAAAGATCCATTGTCAAA+AGG 0.438306 8_1:-15539833 Msa1181250:CDS
AAAACTTCGTCGAGATCCTT+GGG 0.439920 8_1:+15543400 None:intergenic
CAACTGATAGCTTCACTTTG+TGG 0.440343 8_1:+15542150 None:intergenic
TATATCTTTCCCTTTGAAAA+GGG 0.448199 8_1:+15540009 None:intergenic
TATTGTGTAATAGATGGATT+CGG 0.448405 8_1:-15542943 Msa1181250:intron
CTCAGGTGGAATGGTGAAAA+GGG 0.451099 8_1:+15543582 None:intergenic
TACTTTGAGGTGAAAATCAC+TGG 0.453166 8_1:-15539980 Msa1181250:CDS
AGTTAGTATCATTCATAAAG+AGG 0.458318 8_1:-15542286 Msa1181250:CDS
GAAGCGCATCTTCTTGATGA+TGG 0.458875 8_1:-15543278 Msa1181250:CDS
TGAGCAGCGCAAGTGATTAG+AGG 0.462794 8_1:-15542449 Msa1181250:intron
CTTGATAAAGGCAGCTTCCT+GGG 0.465683 8_1:+15539721 None:intergenic
TGCGGGTTAATTCATATCCC+TGG 0.467078 8_1:+15541112 None:intergenic
AGGATGGAGGTCTGTTCAAA+AGG 0.469504 8_1:-15543453 Msa1181250:CDS
GGCAGTAGGGGAAGAAGAGC+TGG 0.470847 8_1:-15540567 Msa1181250:CDS
AGCTGTAATGAGTATGAAGA+AGG 0.471234 8_1:-15542417 Msa1181250:CDS
ACAATGTTCTAAGTTTATGA+AGG 0.473924 8_1:-15541444 Msa1181250:CDS
GAGCTCTAGGCTATCAGAAT+CGG 0.473961 8_1:+15540951 None:intergenic
TTGAAAAGGGCAAGATCATA+TGG 0.474752 8_1:+15540022 None:intergenic
TCATATCGCAGAGTTGCATT+AGG 0.476139 8_1:+15543517 None:intergenic
TGGTTCATCCGAGTCTCGGC+AGG 0.477629 8_1:-15542354 Msa1181250:CDS
ATAGATGGATTCGGTGAGAC+CGG 0.480187 8_1:-15542934 Msa1181250:intron
GGAACAACTGCTTTCACGCT+TGG 0.480449 8_1:-15544061 Msa1181250:CDS
TCAGAATCGGCCTTTCCAAC+CGG 0.481314 8_1:+15540964 None:intergenic
TAGTGTGGAGGATATATGTA+AGG 0.483756 8_1:-15543473 Msa1181250:CDS
TTACAAAATGGAATTGTTTG+AGG 0.484829 8_1:-15541489 Msa1181250:CDS
TCTCGTGGTCGGTCAGGAAA+AGG 0.485887 8_1:-15544308 Msa1181250:CDS
TGATTTCAATTTGGATGTCT+GGG 0.485964 8_1:-15540297 Msa1181250:CDS
GACACCTAATGAGATACATT+TGG 0.486822 8_1:-15539930 Msa1181250:CDS
ACTCAGGTGGAATGGTGAAA+AGG 0.488523 8_1:+15543581 None:intergenic
CAGGCAATTAATGGCTCTGC+GGG 0.488558 8_1:-15541989 Msa1181250:CDS
TCTTCGTCCATGAAAGAATA+CGG 0.489555 8_1:+15544376 None:intergenic
GAGATGAGTGATGAATGAAT+TGG 0.490767 8_1:+15544398 None:intergenic
CCAGGAAGCTGCCTTTATCA+AGG 0.490807 8_1:-15539720 Msa1181250:CDS
AACAAGTGTGCCTCAAGAAG+AGG 0.490940 8_1:-15540663 Msa1181250:CDS
TGGCAAAATAGGAGAGAAGT+TGG 0.491980 8_1:-15540131 Msa1181250:CDS
TAACTCAACCTCATAATGTA+AGG 0.492274 8_1:+15542304 None:intergenic
TGCCAATTCCTGCCGAGACT+CGG 0.493588 8_1:+15542346 None:intergenic
GGCTGTTAGAACTATGAAGA+AGG 0.495009 8_1:-15543089 Msa1181250:CDS
GTTGTTAAAGGTTTGGCTGA+TGG 0.497585 8_1:-15543634 Msa1181250:CDS
CAGTGAAAGATGAGGCAGTA+GGG 0.497590 8_1:-15540580 Msa1181250:CDS
GCGACAGTCATCGTGTCTGA+AGG 0.501665 8_1:+15539767 None:intergenic
AGATATACTTCGTTACTTTG+AGG 0.502998 8_1:-15539993 Msa1181250:CDS
AACTTGAGTTAATTTCTTGG+AGG 0.503226 8_1:-15542855 Msa1181250:CDS
TGAACTTCGTCGTCAACGTC+GGG 0.507770 8_1:+15544226 None:intergenic
GTGGAGGATATATGTAAGGA+TGG 0.507772 8_1:-15543469 Msa1181250:CDS
AAGAAGAAGCTTCTCAAAGT+AGG 0.508102 8_1:-15544265 Msa1181250:CDS
AATGGAAAAGAGGCTGTTGA+GGG 0.508846 8_1:+15544430 None:intergenic
GCTACTTTCTTGGTTTAGTG+TGG 0.510353 8_1:-15543488 Msa1181250:CDS
CATTGCAGTCGTTTAAGAAG+AGG 0.510965 8_1:-15540186 Msa1181250:intron
CATCTCCGCCATGGCCCTTG+CGG 0.512028 8_1:+15542597 None:intergenic
CTGACTTGTAAGCTTAAAGA+TGG 0.513106 8_1:-15542632 Msa1181250:CDS
GGATACAAACGTCCAAAAGA+TGG 0.515267 8_1:-15542772 Msa1181250:CDS
GTTCAAAAGGATACTTAAGA+AGG 0.515459 8_1:-15543440 Msa1181250:CDS
TATGAAGAAGGGAGAGGAAG+CGG 0.515658 8_1:-15543077 Msa1181250:CDS
GGTGAAAATCACTGGTATAC+CGG 0.515792 8_1:-15539972 Msa1181250:CDS
CTTACTGGAACGGTGCTCAA+TGG 0.522170 8_1:-15544103 Msa1181250:CDS
GTCGGTCAGGAAAAGGAAAT+CGG 0.522453 8_1:-15544301 Msa1181250:CDS
ATTCCACCTGAGTTAGCTTA+CGG 0.523205 8_1:-15543571 Msa1181250:CDS
TGGAACGGTGCTCAATGGTA+TGG 0.523692 8_1:-15544098 Msa1181250:CDS
AGAATGATGTTGAGATCCGT+TGG 0.523776 8_1:-15540072 Msa1181250:CDS
ATGCATATTCAAGTGGGGAT+AGG 0.524474 8_1:-15541690 Msa1181250:CDS
TTCAAAAGGATACTTAAGAA+GGG 0.525833 8_1:-15543439 Msa1181250:CDS
GAAGCTCAAAATCGAGCTCT+AGG 0.525943 8_1:+15540938 None:intergenic
TGAGAAAATTTAGGGTGTGT+GGG 0.527837 8_1:-15539692 Msa1181250:three_prime_UTR
ACAGTATCACATACTGCGGT+GGG 0.531217 8_1:-15541747 Msa1181250:CDS
GACGTTGACGACGAAGTTCA+CGG 0.532365 8_1:-15544223 Msa1181250:intron
AATGAGTATGAAGAAGGGTG+AGG 0.533366 8_1:-15542411 Msa1181250:CDS
TCAAAAGGATACTTAAGAAG+GGG 0.534358 8_1:-15543438 Msa1181250:CDS
AATGGCTCTGCGGGTTGAGA+AGG 0.534518 8_1:-15541980 Msa1181250:CDS
TCGGCGCCGGAATCATCCTC+CGG 0.537200 8_1:+15544343 None:intergenic
ACTGAGAACCAGAACTTCTC+CGG 0.538982 8_1:+15539953 None:intergenic
ATTCAATATCTCCTTAACTT+CGG 0.539148 8_1:+15539745 None:intergenic
ACTTTCTTGGTTTAGTGTGG+AGG 0.539462 8_1:-15543485 Msa1181250:CDS
GAAAGAAGGAAATGGAAAAG+AGG 0.539959 8_1:+15544420 None:intergenic
TTCGTGATGCAGTGAGAGAG+TGG 0.541336 8_1:-15542226 Msa1181250:CDS
TCTCAAAGTAGGTCAAGGTT+CGG 0.541649 8_1:-15544254 Msa1181250:CDS
TGGTGAGTTTCAGCTGAAAA+GGG 0.542880 8_1:-15541037 Msa1181250:CDS
GTCTCGGCAGGAATTGGCAG+TGG 0.544402 8_1:-15542342 Msa1181250:CDS
ATCACCATGAGCTGGCTCGC+CGG 0.544925 8_1:+15542915 None:intergenic
ACAAGTGTGCCTCAAGAAGA+GGG 0.546572 8_1:-15540662 Msa1181250:CDS
GCTGTAATGAGTATGAAGAA+GGG 0.548847 8_1:-15542416 Msa1181250:CDS
GATGGTGATGGTGATGGTGA+TGG 0.549042 8_1:-15541057 Msa1181250:CDS
CAGGAAGCTGCCTTTATCAA+GGG 0.550811 8_1:-15539719 Msa1181250:CDS
GATGAACCAAAACCATACTT+AGG 0.550970 8_1:+15542368 None:intergenic
GTGAGAAAATTTAGGGTGTG+TGG 0.554245 8_1:-15539693 Msa1181250:exon
CACAAAGTGAAGCTATCAGT+TGG 0.558376 8_1:-15542149 Msa1181250:CDS
TAGAACTATGAAGAAGGGAG+AGG 0.561771 8_1:-15543083 Msa1181250:CDS
ATCATATGGTGCGTTTGACT+CGG 0.561982 8_1:+15540036 None:intergenic
AGAGAGTTGAGCAGAAACGA+GGG 0.568178 8_1:+15544458 None:intergenic
ACTGCTTTCACGCTTGGACG+AGG 0.568567 8_1:-15544055 Msa1181250:intron
AATTGGATTATCGTCGGCGC+CGG 0.568573 8_1:+15544330 None:intergenic
ATTCACAACAGACGAGGGTG+AGG 0.569735 8_1:-15542558 Msa1181250:CDS
AAATGGAAAAGAGGCTGTTG+AGG 0.569974 8_1:+15544429 None:intergenic
GTAAGCTAACTCAGGTGGAA+TGG 0.570045 8_1:+15543573 None:intergenic
TGATGAATGAATTGGAAAGA+AGG 0.570411 8_1:+15544406 None:intergenic
ACAATAGTTCTCGCTGGTCA+AGG 0.570760 8_1:-15541391 Msa1181250:intron
TGATTCTGCTCCGGTTGGAA+AGG 0.570959 8_1:-15540974 Msa1181250:CDS
GCTCTTCTTGGTGAATGCGA+TGG 0.571244 8_1:-15540431 Msa1181250:CDS
AGTGAAAGATGAGGCAGTAG+GGG 0.574391 8_1:-15540579 Msa1181250:CDS
AAGTATGATTCTGCTCCGGT+TGG 0.574917 8_1:-15540979 Msa1181250:CDS
TCGTGATGCAGTGAGAGAGT+GGG 0.575149 8_1:-15542225 Msa1181250:CDS
AGTATCACATACTGCGGTGG+GGG 0.578278 8_1:-15541745 Msa1181250:CDS
TTGTAAGTCAATGAAAGGAA+AGG 0.579359 8_1:+15541506 None:intergenic
TATGCCAAAATAAAGATCCA+TGG 0.579628 8_1:+15541954 None:intergenic
TAAGTCAATGAAAGGAAAGG+AGG 0.580130 8_1:+15541509 None:intergenic
TAATCAACAATAGTTCTCGC+TGG 0.582915 8_1:-15541397 Msa1181250:CDS
ATGTATGATGGTGATGGTGA+TGG 0.584906 8_1:-15541063 Msa1181250:CDS
GAGACCGGCGAGCCAGCTCA+TGG 0.585752 8_1:-15542919 Msa1181250:CDS
CACGAGAATTGGATTATCGT+CGG 0.587461 8_1:+15544324 None:intergenic
GACAGTATCACATACTGCGG+TGG 0.587716 8_1:-15541748 Msa1181250:CDS
GAGAAAATTTAGGGTGTGTG+GGG 0.588357 8_1:-15539691 Msa1181250:three_prime_UTR
TGATGTAACTGAGGACAAGA+TGG 0.590381 8_1:-15542824 Msa1181250:CDS
GAGAGAGTTGAGCAGAAACG+AGG 0.591804 8_1:+15544457 None:intergenic
TATCGCAGAGTTGCATTAGG+AGG 0.592105 8_1:+15543520 None:intergenic
GCTGTTAGAACTATGAAGAA+GGG 0.592887 8_1:-15543088 Msa1181250:CDS
GAGCAGCGCAAGTGATTAGA+GGG 0.594805 8_1:-15542448 Msa1181250:intron
AAGGCCAGATCTAAAGGCAG+TGG 0.595229 8_1:-15540719 Msa1181250:CDS
ACAGTGAAAGATGAGGCAGT+AGG 0.595795 8_1:-15540581 Msa1181250:CDS
GCTCTGCTTCATCTCCGCCA+TGG 0.596981 8_1:+15542588 None:intergenic
AGCTAAGTCTGATAAAGTAG+TGG 0.597666 8_1:-15543246 Msa1181250:CDS
TGCGAATGTGTCATGTATGA+TGG 0.598856 8_1:-15541075 Msa1181250:CDS
AAAGTGAAGCTATCAGTTGG+AGG 0.599127 8_1:-15542146 Msa1181250:CDS
GCGGGTTGAGAAGGATGCCA+TGG 0.599166 8_1:-15541971 Msa1181250:CDS
TTTGAAGTATGATTCTGCTC+CGG 0.600253 8_1:-15540983 Msa1181250:CDS
AAGCTTCTCAAAGTAGGTCA+AGG 0.601747 8_1:-15544259 Msa1181250:CDS
GAGGATATATGTAAGGATGG+AGG 0.602521 8_1:-15543466 Msa1181250:CDS
CGGTCACTTCATTAAGCCAA+CGG 0.609721 8_1:+15540056 None:intergenic
GAACACAATGTAGAGACACA+TGG 0.609771 8_1:-15540638 Msa1181250:CDS
TGATGTGATCAACAAGATGC+TGG 0.609870 8_1:-15541226 Msa1181250:CDS
AAGATTATGAAGGAAGGTGA+AGG 0.611827 8_1:-15542793 Msa1181250:CDS
AGGCAGTGGCACGAGTAAAG+GGG 0.621931 8_1:-15540705 Msa1181250:CDS
TTTGGCATATATACTATGGG+GGG 0.622304 8_1:-15541940 Msa1181250:CDS
TGTAGTTCATCTTACTGGAA+CGG 0.623849 8_1:-15544113 Msa1181250:intron
CCACCGTAAGCTAACTCAGG+TGG 0.626637 8_1:+15543568 None:intergenic
CTAACAGCCATTGACAATGC+AGG 0.627352 8_1:+15543103 None:intergenic
CCACCTGAGTTAGCTTACGG+TGG 0.631439 8_1:-15543568 Msa1181250:CDS
GTTTGAATTCACAACAGACG+AGG 0.632600 8_1:-15542564 Msa1181250:CDS
GATAATATACTTCAAGTAGA+CGG 0.633596 8_1:-15541910 Msa1181250:CDS
ATATCTACAACAAAGCTGCA+AGG 0.633792 8_1:-15540370 Msa1181250:CDS
CAAAAGGATACTTAAGAAGG+GGG 0.634594 8_1:-15543437 Msa1181250:CDS
GTGAACTTCGTCGTCAACGT+CGG 0.638578 8_1:+15544225 None:intergenic
CGAAGATTTCGATATTCCGG+AGG 0.639719 8_1:-15544359 Msa1181250:CDS
AGGAAGCTGCCTTTATCAAG+GGG 0.641760 8_1:-15539718 Msa1181250:CDS
AGTAGTGGAGTTCACAGTGA+AGG 0.642347 8_1:-15543231 Msa1181250:CDS
AAGTGTGCCTCAAGAAGAGG+GGG 0.642862 8_1:-15540660 Msa1181250:CDS
TCACTTTGTGGGAATCGATG+TGG 0.645122 8_1:+15542162 None:intergenic
CGACGATAATCCAATTCTCG+TGG 0.653003 8_1:-15544323 Msa1181250:CDS
TAAGGAGATATTGAATACCC+AGG 0.654146 8_1:-15539738 Msa1181250:CDS
AGCGAATACAGTGAAAGATG+AGG 0.655797 8_1:-15540588 Msa1181250:CDS
TTCACAACAGACGAGGGTGA+GGG 0.656866 8_1:-15542557 Msa1181250:intron
GATCCACCGTAAGCTAACTC+AGG 0.659750 8_1:+15543565 None:intergenic
CAAGTGTGCCTCAAGAAGAG+GGG 0.662488 8_1:-15540661 Msa1181250:CDS
GGTGAATACTGATTTAAGTG+CGG 0.662780 8_1:-15539867 Msa1181250:CDS
AACACAATGTAGAGACACAT+GGG 0.665142 8_1:-15540637 Msa1181250:CDS
GTGGAGTTCACAGTGAAGGA+CGG 0.666408 8_1:-15543227 Msa1181250:intron
GGAGAAATGGGAAAATCCCA+AGG 0.667575 8_1:-15543416 Msa1181250:CDS
AAGCTGCCTTTATCAAGGGG+AGG 0.668918 8_1:-15539715 Msa1181250:CDS
TGTGTCATGTATGATGGTGA+TGG 0.669723 8_1:-15541069 Msa1181250:CDS
TTTGAATTCACAACAGACGA+GGG 0.679151 8_1:-15542563 Msa1181250:CDS
ACAGGCAATTAATGGCTCTG+CGG 0.679762 8_1:-15541990 Msa1181250:intron
GATGCATATGACTGTAGTGA+GGG 0.684895 8_1:+15541851 None:intergenic
GATAATCCAATTCTCGTGGT+CGG 0.685508 8_1:-15544319 Msa1181250:CDS
CAGTATCACATACTGCGGTG+GGG 0.687869 8_1:-15541746 Msa1181250:CDS
GGTATGGAGTTTGAATCTAG+CGG 0.700618 8_1:-15544082 Msa1181250:CDS
ATCATTCATAAAGAGGACAG+AGG 0.713031 8_1:-15542279 Msa1181250:CDS
TGATGCATATGACTGTAGTG+AGG 0.734024 8_1:+15541850 None:intergenic
GCAGACAGTATCACATACTG+CGG 0.735504 8_1:-15541751 Msa1181250:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTATAAAAACAAATTAAT+AGG + chr8_1:15541534-15541553 None:intergenic 10.0%
!!! TAATAGTATTTTATTTGAAT+CGG - chr8_1:15542255-15542274 Msa1181250:CDS 10.0%
!!! TTAGTTTCTTTATTTGATTT+AGG - chr8_1:15540036-15540055 Msa1181250:CDS 15.0%
!! AAATGTTTATATAACACTTT+GGG - chr8_1:15541023-15541042 Msa1181250:CDS 15.0%
!!! TTTTTTTATTGTGTAATAGA+TGG - chr8_1:15541081-15541100 Msa1181250:CDS 15.0%
!! TTGTAATTTCTAATGAAAAT+GGG + chr8_1:15541923-15541942 None:intergenic 15.0%
!! TTTGTAATTTCTAATGAAAA+TGG + chr8_1:15541924-15541943 None:intergenic 15.0%
!!! TTTTCATTAGAAATTACAAA+TGG - chr8_1:15541924-15541943 Msa1181250:CDS 15.0%
!! GATTCAAATAAAATACTATT+AGG + chr8_1:15542256-15542275 None:intergenic 15.0%
!! AAAACAACATAAACAATAAA+AGG + chr8_1:15542454-15542473 None:intergenic 15.0%
!! TCTTTCACAAAATAAAATTA+AGG + chr8_1:15543197-15543216 None:intergenic 15.0%
!!! ATTTGATTTAGGTTTATGTT+TGG - chr8_1:15540047-15540066 Msa1181250:CDS 20.0%
!! CAATCAAATATAGAAACTAA+CGG + chr8_1:15540075-15540094 None:intergenic 20.0%
!! GAAATGTTTATATAACACTT+TGG - chr8_1:15541022-15541041 Msa1181250:CDS 20.0%
!! TAAAACTTGAGTTAATTTCT+TGG - chr8_1:15541172-15541191 Msa1181250:CDS 20.0%
!! ATTATCTTAAATTGTTGCAT+TGG - chr8_1:15541498-15541517 Msa1181250:CDS 20.0%
!! ATTAGAAATTACAAATGGTA+TGG - chr8_1:15541929-15541948 Msa1181250:CDS 20.0%
!!! GAATTTTTAGTTAAAGTGTT+TGG - chr8_1:15541955-15541974 Msa1181250:CDS 20.0%
!!! TTATTTTGGCATATATACTA+TGG - chr8_1:15542086-15542105 Msa1181250:intron 20.0%
!!! TATTTTGGCATATATACTAT+GGG - chr8_1:15542087-15542106 Msa1181250:intron 20.0%
!! ATAAAAATGCATATTCAAGT+GGG - chr8_1:15542334-15542353 Msa1181250:CDS 20.0%
!!! TTTTGTCAATTTTGAAATTC+AGG - chr8_1:15542383-15542402 Msa1181250:CDS 20.0%
!!! ATTTTACCTAAAGAAATATG+AGG + chr8_1:15543157-15543176 None:intergenic 20.0%
!!! TCGGTTTTGATTTGATTAAT+TGG - chr8_1:15540008-15540027 Msa1181250:CDS 25.0%
!! CGTTAGTTTCTATATTTGAT+TGG - chr8_1:15540073-15540092 Msa1181250:CDS 25.0%
! AACAATGAAAAAAGGTGAAA+AGG - chr8_1:15540425-15540444 Msa1181250:CDS 25.0%
! TTCAAAAGGATACTTAAGAA+GGG - chr8_1:15540591-15540610 Msa1181250:CDS 25.0%
!! TATTGTGTAATAGATGGATT+CGG - chr8_1:15541087-15541106 Msa1181250:CDS 25.0%
! GGTTGTAAAAAAGATTATGA+AGG - chr8_1:15541227-15541246 Msa1181250:CDS 25.0%
! GTAAAAAAGATTATGAAGGA+AGG - chr8_1:15541231-15541250 Msa1181250:CDS 25.0%
! AGGTAAATTACCATTGATAA+TGG - chr8_1:15541293-15541312 Msa1181250:CDS 25.0%
! AAATTCAACCTTACATTATG+AGG - chr8_1:15541718-15541737 Msa1181250:CDS 25.0%
! AGTTAGTATCATTCATAAAG+AGG - chr8_1:15541744-15541763 Msa1181250:CDS 25.0%
!! TCAATTGATATTTCTATCAC+AGG - chr8_1:15542022-15542041 Msa1181250:intron 25.0%
!!! ATTTTGGCATATATACTATG+GGG - chr8_1:15542088-15542107 Msa1181250:intron 25.0%
! GATAATATACTTCAAGTAGA+CGG - chr8_1:15542120-15542139 Msa1181250:CDS 25.0%
! CATAAAAATGCATATTCAAG+TGG - chr8_1:15542333-15542352 Msa1181250:CDS 25.0%
! TAAAAATGCATATTCAAGTG+GGG - chr8_1:15542335-15542354 Msa1181250:CDS 25.0%
! GGTATTTCAACATTTCATAA+TGG - chr8_1:15542418-15542437 Msa1181250:CDS 25.0%
! TTACAAAATGGAATTGTTTG+AGG - chr8_1:15542541-15542560 Msa1181250:intron 25.0%
!! ACAATGTTCTAAGTTTATGA+AGG - chr8_1:15542586-15542605 Msa1181250:CDS 25.0%
!! CAGTTTATGTGATCTTTTAA+AGG - chr8_1:15542735-15542754 Msa1181250:intron 25.0%
!! ACTTTTTATAGAGACGATAA+AGG - chr8_1:15542832-15542851 Msa1181250:CDS 25.0%
!! ATTTTAGATATGATTCACCA+GGG - chr8_1:15542901-15542920 Msa1181250:CDS 25.0%
! TGTGAAAGATTTACTTAATC+TGG - chr8_1:15543208-15543227 Msa1181250:intron 25.0%
! GTGAAAGATTTACTTAATCT+GGG - chr8_1:15543209-15543228 Msa1181250:intron 25.0%
! CATAAATCCTGATTTCAATT+TGG - chr8_1:15543724-15543743 Msa1181250:intron 25.0%
!! TCCTATTTTGCCAATTTTTT+TGG + chr8_1:15543892-15543911 None:intergenic 25.0%
!! CTTTTTGTCATTGTACTTTT+CGG + chr8_1:15543940-15543959 None:intergenic 25.0%
!! TATATCTTTCCCTTTGAAAA+GGG + chr8_1:15544024-15544043 None:intergenic 25.0%
! ATAAAAGATCCATTGTCAAA+AGG - chr8_1:15544197-15544216 Msa1181250:intron 25.0%
! TAAAAGATCCATTGTCAAAA+GGG - chr8_1:15544198-15544217 Msa1181250:intron 25.0%
! ATTCAATATCTCCTTAACTT+CGG + chr8_1:15544288-15544307 None:intergenic 25.0%
ATGAATTGGAAAGAAGGAAA+TGG + chr8_1:15539621-15539640 None:intergenic 30.0%
TGATGAATGAATTGGAAAGA+AGG + chr8_1:15539627-15539646 None:intergenic 30.0%
TTATGTGTAGTTCATCTTAC+TGG - chr8_1:15539912-15539931 Msa1181250:CDS 30.0%
TTGATTATAGTAGTCAGTAG+CGG - chr8_1:15540104-15540123 Msa1181250:CDS 30.0%
AATTCTGTCTTATCATTGTC+TGG - chr8_1:15540336-15540355 Msa1181250:CDS 30.0%
!!! AAGTAATGTGTTGATTTTGC+AGG - chr8_1:15540369-15540388 Msa1181250:CDS 30.0%
!!! AGTAATGTGTTGATTTTGCA+GGG - chr8_1:15540370-15540389 Msa1181250:CDS 30.0%
GGTGTGAAAACAATGAAAAA+AGG - chr8_1:15540417-15540436 Msa1181250:CDS 30.0%
GTTCAAAAGGATACTTAAGA+AGG - chr8_1:15540590-15540609 Msa1181250:CDS 30.0%
TCAAAAGGATACTTAAGAAG+GGG - chr8_1:15540592-15540611 Msa1181250:CDS 30.0%
TAGAGTCACTCAATGAAAAA+TGG + chr8_1:15540680-15540699 None:intergenic 30.0%
! AGTGCGAACAAATTTTATCA+TGG - chr8_1:15540828-15540847 Msa1181250:intron 30.0%
TGTGTAAAGAACTTACATTG+AGG + chr8_1:15540993-15541012 None:intergenic 30.0%
AAGTTCTTTACACAACACTT+TGG - chr8_1:15540999-15541018 Msa1181250:CDS 30.0%
AGTTCTTTACACAACACTTT+GGG - chr8_1:15541000-15541019 Msa1181250:CDS 30.0%
ATCTCTAATATTGCATTAGC+TGG + chr8_1:15541153-15541172 None:intergenic 30.0%
AACTTGAGTTAATTTCTTGG+AGG - chr8_1:15541175-15541194 Msa1181250:CDS 30.0%
AAGAAAAGAGCCATTATCAA+TGG + chr8_1:15541306-15541325 None:intergenic 30.0%
TAATGTAAGGTTGAATTTGC+AGG + chr8_1:15541716-15541735 None:intergenic 30.0%
TAACTCAACCTCATAATGTA+AGG + chr8_1:15541729-15541748 None:intergenic 30.0%
TTTCTATCACAGGCAATTAA+TGG - chr8_1:15542032-15542051 Msa1181250:intron 30.0%
TATGCCAAAATAAAGATCCA+TGG + chr8_1:15542079-15542098 None:intergenic 30.0%
! TTTTGGCATATATACTATGG+GGG - chr8_1:15542089-15542108 Msa1181250:intron 30.0%
! AGTCATATGCATCATTTTCA+TGG - chr8_1:15542189-15542208 Msa1181250:CDS 30.0%
TTGTAAGTCAATGAAAGGAA+AGG + chr8_1:15542527-15542546 None:intergenic 30.0%
! CCATTTTGTAAGTCAATGAA+AGG + chr8_1:15542532-15542551 None:intergenic 30.0%
!! CCTTTCATTGACTTACAAAA+TGG - chr8_1:15542529-15542548 Msa1181250:intron 30.0%
ATCATAAATATATCAGTGCC+TGG + chr8_1:15542707-15542726 None:intergenic 30.0%
CGATCAAAAAGTAAAGAAGA+TGG - chr8_1:15542859-15542878 Msa1181250:CDS 30.0%
TCAAAAAGTAAAGAAGATGG+TGG - chr8_1:15542862-15542881 Msa1181250:CDS 30.0%
! GATTTTAGATATGATTCACC+AGG - chr8_1:15542900-15542919 Msa1181250:CDS 30.0%
! GCATTTCTTATTCTTTTTGC+GGG + chr8_1:15542938-15542957 None:intergenic 30.0%
! CGCATTTCTTATTCTTTTTG+CGG + chr8_1:15542939-15542958 None:intergenic 30.0%
TTTGAGCTTCAGGAAAAAAT+TGG - chr8_1:15543105-15543124 Msa1181250:CDS 30.0%
TTGAGCTTCAGGAAAAAATT+GGG - chr8_1:15543106-15543125 Msa1181250:CDS 30.0%
TTGTCACCTCATATTTCTTT+AGG - chr8_1:15543148-15543167 Msa1181250:intron 30.0%
! TCTGGGTTTTTCTTGATTTT+TGG - chr8_1:15543226-15543245 Msa1181250:intron 30.0%
AAACACACCTAAGAAAAAGA+AGG - chr8_1:15543292-15543311 Msa1181250:intron 30.0%
! TCATTTTCCATTGCAGTTTT+TGG + chr8_1:15543419-15543438 None:intergenic 30.0%
AAAAACTGCAATGGAAAATG+AGG - chr8_1:15543418-15543437 Msa1181250:CDS 30.0%
TGATTTCAATTTGGATGTCT+GGG - chr8_1:15543733-15543752 Msa1181250:intron 30.0%
GCCAAAAAAATTGGCAAAAT+AGG - chr8_1:15543888-15543907 Msa1181250:intron 30.0%
! GTATATCTTTCCCTTTGAAA+AGG + chr8_1:15544025-15544044 None:intergenic 30.0%
! AGATATACTTCGTTACTTTG+AGG - chr8_1:15544037-15544056 Msa1181250:intron 30.0%
GTATAGTGTAGTGTTCATTA+AGG - chr8_1:15544142-15544161 Msa1181250:intron 30.0%
!! AATTTTAAGGACCAAGAAAG+AGG - chr8_1:15544235-15544254 Msa1181250:CDS 30.0%
AGTAGTATTTCCTGCAAAAA+AGG + chr8_1:15544460-15544479 None:intergenic 30.0%
GAAAGAAGGAAATGGAAAAG+AGG + chr8_1:15539613-15539632 None:intergenic 35.0%
GAGATGAGTGATGAATGAAT+TGG + chr8_1:15539635-15539654 None:intergenic 35.0%
TCTTCGTCCATGAAAGAATA+CGG + chr8_1:15539657-15539676 None:intergenic 35.0%
GAAAAGGAAATCGGTGATAA+AGG - chr8_1:15539738-15539757 Msa1181250:CDS 35.0%
AAGAAGAAGCTTCTCAAAGT+AGG - chr8_1:15539765-15539784 Msa1181250:CDS 35.0%
TGTAGTTCATCTTACTGGAA+CGG - chr8_1:15539917-15539936 Msa1181250:CDS 35.0%
! ATGATGTTGAGCTACTTTCT+TGG - chr8_1:15540532-15540551 Msa1181250:CDS 35.0%
TAGTGTGGAGGATATATGTA+AGG - chr8_1:15540557-15540576 Msa1181250:CDS 35.0%
CAAAAGGATACTTAAGAAGG+GGG - chr8_1:15540593-15540612 Msa1181250:CDS 35.0%
AATTCACTGCAACAACAGAA+GGG + chr8_1:15540730-15540749 None:intergenic 35.0%
TAATTCACTGCAACAACAGA+AGG + chr8_1:15540731-15540750 None:intergenic 35.0%
AGCTAAGTCTGATAAAGTAG+TGG - chr8_1:15540784-15540803 Msa1181250:intron 35.0%
TATAATGTTCACCATGAGAC+AGG - chr8_1:15540894-15540913 Msa1181250:CDS 35.0%
! TTTTTGTCCTGCATTGTCAA+TGG - chr8_1:15540920-15540939 Msa1181250:CDS 35.0%
GCTGTTAGAACTATGAAGAA+GGG - chr8_1:15540942-15540961 Msa1181250:CDS 35.0%
!!! GACTGTTTTTGATGTAACTG+AGG - chr8_1:15541197-15541216 Msa1181250:CDS 35.0%
AAGATTATGAAGGAAGGTGA+AGG - chr8_1:15541237-15541256 Msa1181250:CDS 35.0%
! TTTACATCAGCTCCATCTTT+TGG + chr8_1:15541273-15541292 None:intergenic 35.0%
AAAGATGGAGCTGATGTAAA+AGG - chr8_1:15541273-15541292 Msa1181250:CDS 35.0%
! CTGACTTGTAAGCTTAAAGA+TGG - chr8_1:15541398-15541417 Msa1181250:CDS 35.0%
TTTGAATTCACAACAGACGA+GGG - chr8_1:15541467-15541486 Msa1181250:CDS 35.0%
AGCTGTAATGAGTATGAAGA+AGG - chr8_1:15541613-15541632 Msa1181250:intron 35.0%
GCTGTAATGAGTATGAAGAA+GGG - chr8_1:15541614-15541633 Msa1181250:intron 35.0%
TTGACTATTGCACCTAAGTA+TGG - chr8_1:15541650-15541669 Msa1181250:CDS 35.0%
! ATTGCACCTAAGTATGGTTT+TGG - chr8_1:15541656-15541675 Msa1181250:CDS 35.0%
GATGAACCAAAACCATACTT+AGG + chr8_1:15541665-15541684 None:intergenic 35.0%
ATCATTCATAAAGAGGACAG+AGG - chr8_1:15541751-15541770 Msa1181250:intron 35.0%
! TCTTTGTTCTTTTCGCTCTT+AGG + chr8_1:15541842-15541861 None:intergenic 35.0%
AACTGATAGCTTCACTTTGT+GGG + chr8_1:15541882-15541901 None:intergenic 35.0%
!! GATGCCATGGATCTTTATTT+TGG - chr8_1:15542072-15542091 Msa1181250:intron 35.0%
TTTGGCATATATACTATGGG+GGG - chr8_1:15542090-15542109 Msa1181250:intron 35.0%
TAAGTCAATGAAAGGAAAGG+AGG + chr8_1:15542524-15542543 None:intergenic 35.0%
TAATCAACAATAGTTCTCGC+TGG - chr8_1:15542633-15542652 Msa1181250:CDS 35.0%
! CAGCTTTTACTGAAAAGCTT+TGG + chr8_1:15542786-15542805 None:intergenic 35.0%
! TCAGCTGAAAAGGGATTTTT+CGG - chr8_1:15543002-15543021 Msa1181250:intron 35.0%
! TTTGAAGTATGATTCTGCTC+CGG - chr8_1:15543047-15543066 Msa1181250:intron 35.0%
AAAAAGAAGGCCAGATCTAA+AGG - chr8_1:15543305-15543324 Msa1181250:intron 35.0%
AACACAATGTAGAGACACAT+GGG - chr8_1:15543393-15543412 Msa1181250:intron 35.0%
ATATCTACAACAAAGCTGCA+AGG - chr8_1:15543660-15543679 Msa1181250:intron 35.0%
CAGACATCCAAATTGAAATC+AGG + chr8_1:15543734-15543753 None:intergenic 35.0%
CTGATTTCAATTTGGATGTC+TGG - chr8_1:15543732-15543751 Msa1181250:intron 35.0%
GCAATGACAAGAAAGCAAAA+AGG + chr8_1:15543830-15543849 None:intergenic 35.0%
TTGAAAAGGGCAAGATCATA+TGG + chr8_1:15544011-15544030 None:intergenic 35.0%
! TATGATCTTGCCCTTTTCAA+AGG - chr8_1:15544011-15544030 Msa1181250:intron 35.0%
! ATGATCTTGCCCTTTTCAAA+GGG - chr8_1:15544012-15544031 Msa1181250:intron 35.0%
!! TACTTTGAGGTGAAAATCAC+TGG - chr8_1:15544050-15544069 Msa1181250:intron 35.0%
GACACCTAATGAGATACATT+TGG - chr8_1:15544100-15544119 Msa1181250:CDS 35.0%
!! ATACAAATCAGCGCTTTTTG+CGG + chr8_1:15544126-15544145 None:intergenic 35.0%
!! GGTGAATACTGATTTAAGTG+CGG - chr8_1:15544163-15544182 Msa1181250:intron 35.0%
! GCGAATTGCAAGCAATTTTA+AGG - chr8_1:15544222-15544241 Msa1181250:intron 35.0%
TAAGGAGATATTGAATACCC+AGG - chr8_1:15544292-15544311 Msa1181250:CDS 35.0%
! TGAGAAAATTTAGGGTGTGT+GGG - chr8_1:15544338-15544357 Msa1181250:CDS 35.0%
!!! ATACTCTTGTCCTTTTTTGC+AGG - chr8_1:15544447-15544466 Msa1181250:five_prime_UTR 35.0%
AATGGAAAAGAGGCTGTTGA+GGG + chr8_1:15539603-15539622 None:intergenic 40.0%
AAATGGAAAAGAGGCTGTTG+AGG + chr8_1:15539604-15539623 None:intergenic 40.0%
CTCATCTCCGTATTCTTTCA+TGG - chr8_1:15539647-15539666 Msa1181250:three_prime_UTR 40.0%
GGACGAAGATTTCGATATTC+CGG - chr8_1:15539668-15539687 Msa1181250:three_prime_UTR 40.0%
CACGAGAATTGGATTATCGT+CGG + chr8_1:15539709-15539728 None:intergenic 40.0%
GATAATCCAATTCTCGTGGT+CGG - chr8_1:15539711-15539730 Msa1181250:exon 40.0%
AAGCTTCTCAAAGTAGGTCA+AGG - chr8_1:15539771-15539790 Msa1181250:CDS 40.0%
TCTCAAAGTAGGTCAAGGTT+CGG - chr8_1:15539776-15539795 Msa1181250:CDS 40.0%
GGTATGGAGTTTGAATCTAG+CGG - chr8_1:15539948-15539967 Msa1181250:CDS 40.0%
TTTGCAGGGCATGTTGTTAA+AGG - chr8_1:15540384-15540403 Msa1181250:CDS 40.0%
AGGGCATGTTGTTAAAGGTT+TGG - chr8_1:15540389-15540408 Msa1181250:CDS 40.0%
GTTGTTAAAGGTTTGGCTGA+TGG - chr8_1:15540396-15540415 Msa1181250:CDS 40.0%
! ATTCCACCTGAGTTAGCTTA+CGG - chr8_1:15540459-15540478 Msa1181250:CDS 40.0%
! GCATTAGGAGGAATCTGTTT+TGG + chr8_1:15540501-15540520 None:intergenic 40.0%
TCATATCGCAGAGTTGCATT+AGG + chr8_1:15540516-15540535 None:intergenic 40.0%
! GCTACTTTCTTGGTTTAGTG+TGG - chr8_1:15540542-15540561 Msa1181250:CDS 40.0%
ACTTTCTTGGTTTAGTGTGG+AGG - chr8_1:15540545-15540564 Msa1181250:CDS 40.0%
GTGGAGGATATATGTAAGGA+TGG - chr8_1:15540561-15540580 Msa1181250:CDS 40.0%
GAGGATATATGTAAGGATGG+AGG - chr8_1:15540564-15540583 Msa1181250:CDS 40.0%
TACTTAAGAAGGGGGAGAAA+TGG - chr8_1:15540601-15540620 Msa1181250:CDS 40.0%
ACTTAAGAAGGGGGAGAAAT+GGG - chr8_1:15540602-15540621 Msa1181250:CDS 40.0%
AAAACTTCGTCGAGATCCTT+GGG + chr8_1:15540633-15540652 None:intergenic 40.0%
TAAAACTTCGTCGAGATCCT+TGG + chr8_1:15540634-15540653 None:intergenic 40.0%
! AAGGATCTCGACGAAGTTTT+AGG - chr8_1:15540633-15540652 Msa1181250:CDS 40.0%
GACAAAAATGACCTGTCTCA+TGG + chr8_1:15540908-15540927 None:intergenic 40.0%
GGCTGTTAGAACTATGAAGA+AGG - chr8_1:15540941-15540960 Msa1181250:CDS 40.0%
TAGAACTATGAAGAAGGGAG+AGG - chr8_1:15540947-15540966 Msa1181250:CDS 40.0%
TGATGTAACTGAGGACAAGA+TGG - chr8_1:15541206-15541225 Msa1181250:CDS 40.0%
GGATACAAACGTCCAAAAGA+TGG - chr8_1:15541258-15541277 Msa1181250:CDS 40.0%
GTTTGAATTCACAACAGACG+AGG - chr8_1:15541466-15541485 Msa1181250:CDS 40.0%
CAACAGACATTCACTTTCGT+TGG + chr8_1:15541558-15541577 None:intergenic 40.0%
AATGAGTATGAAGAAGGGTG+AGG - chr8_1:15541619-15541638 Msa1181250:intron 40.0%
! GTTCTTTTCGCTCTTAGGTT+TGG + chr8_1:15541837-15541856 None:intergenic 40.0%
CAACTGATAGCTTCACTTTG+TGG + chr8_1:15541883-15541902 None:intergenic 40.0%
CACAAAGTGAAGCTATCAGT+TGG - chr8_1:15541881-15541900 Msa1181250:CDS 40.0%
AAAGTGAAGCTATCAGTTGG+AGG - chr8_1:15541884-15541903 Msa1181250:CDS 40.0%
ATATACTATGGGGGGACAAA+AGG - chr8_1:15542098-15542117 Msa1181250:intron 40.0%
!!! AGACGGCATCGATTCATTTT+TGG - chr8_1:15542137-15542156 Msa1181250:CDS 40.0%
GATGCATATGACTGTAGTGA+GGG + chr8_1:15542182-15542201 None:intergenic 40.0%
TGATGCATATGACTGTAGTG+AGG + chr8_1:15542183-15542202 None:intergenic 40.0%
ATGCATATTCAAGTGGGGAT+AGG - chr8_1:15542340-15542359 Msa1181250:CDS 40.0%
AAATTCAGGTGCAAGCGATT+AGG - chr8_1:15542397-15542416 Msa1181250:CDS 40.0%
! GTTTTTGATCAACAGCTCGA+AGG - chr8_1:15542493-15542512 Msa1181250:intron 40.0%
AATATATCAGTGCCTGGTTC+AGG + chr8_1:15542701-15542720 None:intergenic 40.0%
TGATGTGATCAACAAGATGC+TGG - chr8_1:15542804-15542823 Msa1181250:CDS 40.0%
TGCGAATGTGTCATGTATGA+TGG - chr8_1:15542955-15542974 Msa1181250:intron 40.0%
! TGTGTCATGTATGATGGTGA+TGG - chr8_1:15542961-15542980 Msa1181250:intron 40.0%
!! ATGTATGATGGTGATGGTGA+TGG - chr8_1:15542967-15542986 Msa1181250:intron 40.0%
ATGGTGAGTTTCAGCTGAAA+AGG - chr8_1:15542992-15543011 Msa1181250:intron 40.0%
TGGTGAGTTTCAGCTGAAAA+GGG - chr8_1:15542993-15543012 Msa1181250:intron 40.0%
!! GATCTGGCCTTCTTTTTCTT+AGG + chr8_1:15543302-15543321 None:intergenic 40.0%
TTCTTGAGGCACACTTGTTT+GGG + chr8_1:15543366-15543385 None:intergenic 40.0%
GAACACAATGTAGAGACACA+TGG - chr8_1:15543392-15543411 Msa1181250:intron 40.0%
AGCGAATACAGTGAAAGATG+AGG - chr8_1:15543442-15543461 Msa1181250:CDS 40.0%
GCAAAGATTTCAGCTCTTCT+TGG - chr8_1:15543587-15543606 Msa1181250:CDS 40.0%
CATTGCAGTCGTTTAAGAAG+AGG - chr8_1:15543844-15543863 Msa1181250:intron 40.0%
GACGAGCAAGCCAAAAAAAT+TGG - chr8_1:15543879-15543898 Msa1181250:intron 40.0%
TGGCAAAATAGGAGAGAAGT+TGG - chr8_1:15543899-15543918 Msa1181250:intron 40.0%
AGAATGATGTTGAGATCCGT+TGG - chr8_1:15543958-15543977 Msa1181250:intron 40.0%
ATCATATGGTGCGTTTGACT+CGG + chr8_1:15543997-15544016 None:intergenic 40.0%
GGTGAAAATCACTGGTATAC+CGG - chr8_1:15544058-15544077 Msa1181250:CDS 40.0%
! AATTCGCTCCCTTTTGACAA+TGG + chr8_1:15544209-15544228 None:intergenic 40.0%
AAGGGGAGGTGAGAAAATTT+AGG - chr8_1:15544329-15544348 Msa1181250:CDS 40.0%
AGGGGAGGTGAGAAAATTTA+GGG - chr8_1:15544330-15544349 Msa1181250:CDS 40.0%
! GTGAGAAAATTTAGGGTGTG+TGG - chr8_1:15544337-15544356 Msa1181250:CDS 40.0%
! GAGAAAATTTAGGGTGTGTG+GGG - chr8_1:15544339-15544358 Msa1181250:CDS 40.0%
TGAGCAGAAACGAGGGTTTA+GGG + chr8_1:15539568-15539587 None:intergenic 45.0%
TTGAGCAGAAACGAGGGTTT+AGG + chr8_1:15539569-15539588 None:intergenic 45.0%
AGAGAGTTGAGCAGAAACGA+GGG + chr8_1:15539575-15539594 None:intergenic 45.0%
CGAAGATTTCGATATTCCGG+AGG - chr8_1:15539671-15539690 Msa1181250:three_prime_UTR 45.0%
GATATTCCGGAGGATGATTC+CGG - chr8_1:15539681-15539700 Msa1181250:three_prime_UTR 45.0%
CGACGATAATCCAATTCTCG+TGG - chr8_1:15539707-15539726 Msa1181250:exon 45.0%
GTCGGTCAGGAAAAGGAAAT+CGG - chr8_1:15539729-15539748 Msa1181250:CDS 45.0%
TGGACGAGGTGCGTATTAAT+CGG - chr8_1:15539989-15540008 Msa1181250:CDS 45.0%
CTCAGGTGGAATGGTGAAAA+GGG + chr8_1:15540451-15540470 None:intergenic 45.0%
ACTCAGGTGGAATGGTGAAA+AGG + chr8_1:15540452-15540471 None:intergenic 45.0%
GTAAGCTAACTCAGGTGGAA+TGG + chr8_1:15540460-15540479 None:intergenic 45.0%
TATCGCAGAGTTGCATTAGG+AGG + chr8_1:15540513-15540532 None:intergenic 45.0%
AGGATGGAGGTCTGTTCAAA+AGG - chr8_1:15540577-15540596 Msa1181250:CDS 45.0%
GGAGAAATGGGAAAATCCCA+AGG - chr8_1:15540614-15540633 Msa1181250:CDS 45.0%
GAAGCGCATCTTCTTGATGA+TGG - chr8_1:15540752-15540771 Msa1181250:CDS 45.0%
! AGTAGTGGAGTTCACAGTGA+AGG - chr8_1:15540799-15540818 Msa1181250:intron 45.0%
CTAACAGCCATTGACAATGC+AGG + chr8_1:15540930-15540949 None:intergenic 45.0%
TATGAAGAAGGGAGAGGAAG+CGG - chr8_1:15540953-15540972 Msa1181250:CDS 45.0%
!! ATAGATGGATTCGGTGAGAC+CGG - chr8_1:15541096-15541115 Msa1181250:CDS 45.0%
! GCACTTTTATCACCATGAGC+TGG + chr8_1:15541126-15541145 None:intergenic 45.0%
!!! GTTTTGGTTCATCCGAGTCT+CGG - chr8_1:15541672-15541691 Msa1181250:CDS 45.0%
TCACTTTGTGGGAATCGATG+TGG + chr8_1:15541871-15541890 None:intergenic 45.0%
! ACAGGCAATTAATGGCTCTG+CGG - chr8_1:15542040-15542059 Msa1181250:intron 45.0%
GCAGACAGTATCACATACTG+CGG - chr8_1:15542279-15542298 Msa1181250:CDS 45.0%
ACAGTATCACATACTGCGGT+GGG - chr8_1:15542283-15542302 Msa1181250:CDS 45.0%
! AAGTGGGGATAGGAGTTTTG+AGG - chr8_1:15542350-15542369 Msa1181250:CDS 45.0%
!!! AGGAGTTTTGAGGACAGTGA+AGG - chr8_1:15542360-15542379 Msa1181250:CDS 45.0%
ACAATAGTTCTCGCTGGTCA+AGG - chr8_1:15542639-15542658 Msa1181250:CDS 45.0%
CAGGTTCGACAAATGGCTTA+TGG + chr8_1:15542682-15542701 None:intergenic 45.0%
! TGCGGGTTAATTCATATCCC+TGG + chr8_1:15542921-15542940 None:intergenic 45.0%
AAGTATGATTCTGCTCCGGT+TGG - chr8_1:15543051-15543070 Msa1181250:intron 45.0%
!! GAGCTCTAGGCTATCAGAAT+CGG + chr8_1:15543082-15543101 None:intergenic 45.0%
GAAGCTCAAAATCGAGCTCT+AGG + chr8_1:15543095-15543114 None:intergenic 45.0%
! AGAGCTCGATTTTGAGCTTC+AGG - chr8_1:15543095-15543114 Msa1181250:CDS 45.0%
CTTCTTGAGGCACACTTGTT+TGG + chr8_1:15543367-15543386 None:intergenic 45.0%
AACAAGTGTGCCTCAAGAAG+AGG - chr8_1:15543367-15543386 Msa1181250:intron 45.0%
ACAAGTGTGCCTCAAGAAGA+GGG - chr8_1:15543368-15543387 Msa1181250:intron 45.0%
ACATGGGCCAAAAACTGCAA+TGG - chr8_1:15543409-15543428 Msa1181250:CDS 45.0%
ACAGTGAAAGATGAGGCAGT+AGG - chr8_1:15543449-15543468 Msa1181250:CDS 45.0%
CAGTGAAAGATGAGGCAGTA+GGG - chr8_1:15543450-15543469 Msa1181250:CDS 45.0%
AGTGAAAGATGAGGCAGTAG+GGG - chr8_1:15543451-15543470 Msa1181250:CDS 45.0%
CGGTCACTTCATTAAGCCAA+CGG + chr8_1:15543977-15543996 None:intergenic 45.0%
ACTGAGAACCAGAACTTCTC+CGG + chr8_1:15544080-15544099 None:intergenic 45.0%
GCGGCCAAATGTATCTCATT+AGG + chr8_1:15544107-15544126 None:intergenic 45.0%
TGAAGGTTTCGCCTCTTTCT+TGG + chr8_1:15544249-15544268 None:intergenic 45.0%
CTTGATAAAGGCAGCTTCCT+GGG + chr8_1:15544312-15544331 None:intergenic 45.0%
CAGGAAGCTGCCTTTATCAA+GGG - chr8_1:15544311-15544330 Msa1181250:CDS 45.0%
AGGAAGCTGCCTTTATCAAG+GGG - chr8_1:15544312-15544331 Msa1181250:CDS 45.0%
TTCTCACCTCCCCTTGATAA+AGG + chr8_1:15544324-15544343 None:intergenic 45.0%
GAGAGAGTTGAGCAGAAACG+AGG + chr8_1:15539576-15539595 None:intergenic 50.0%
AATTGGATTATCGTCGGCGC+CGG + chr8_1:15539703-15539722 None:intergenic 50.0%
TGAACTTCGTCGTCAACGTC+GGG + chr8_1:15539807-15539826 None:intergenic 50.0%
GTGAACTTCGTCGTCAACGT+CGG + chr8_1:15539808-15539827 None:intergenic 50.0%
GACGTTGACGACGAAGTTCA+CGG - chr8_1:15539807-15539826 Msa1181250:CDS 50.0%
CTTACTGGAACGGTGCTCAA+TGG - chr8_1:15539927-15539946 Msa1181250:CDS 50.0%
TGGAACGGTGCTCAATGGTA+TGG - chr8_1:15539932-15539951 Msa1181250:CDS 50.0%
GGAACAACTGCTTTCACGCT+TGG - chr8_1:15539969-15539988 Msa1181250:CDS 50.0%
CGCTACAACGATTAGTGTCG+CGG + chr8_1:15540172-15540191 None:intergenic 50.0%
CGCGACACTAATCGTTGTAG+CGG - chr8_1:15540170-15540189 Msa1181250:CDS 50.0%
CACTAATCGTTGTAGCGGTG+CGG - chr8_1:15540175-15540194 Msa1181250:CDS 50.0%
GATCCACCGTAAGCTAACTC+AGG + chr8_1:15540468-15540487 None:intergenic 50.0%
! GAGTTAGCTTACGGTGGATC+TGG - chr8_1:15540468-15540487 Msa1181250:CDS 50.0%
GTGGAGTTCACAGTGAAGGA+CGG - chr8_1:15540803-15540822 Msa1181250:intron 50.0%
! TGGCACTGTGTTTTTCCGCA+AGG - chr8_1:15541418-15541437 Msa1181250:CDS 50.0%
! GGCACTGTGTTTTTCCGCAA+GGG - chr8_1:15541419-15541438 Msa1181250:CDS 50.0%
ATTCACAACAGACGAGGGTG+AGG - chr8_1:15541472-15541491 Msa1181250:CDS 50.0%
TTCACAACAGACGAGGGTGA+GGG - chr8_1:15541473-15541492 Msa1181250:CDS 50.0%
TGAGCAGCGCAAGTGATTAG+AGG - chr8_1:15541581-15541600 Msa1181250:intron 50.0%
GAGCAGCGCAAGTGATTAGA+GGG - chr8_1:15541582-15541601 Msa1181250:intron 50.0%
TTCGTGATGCAGTGAGAGAG+TGG - chr8_1:15541804-15541823 Msa1181250:intron 50.0%
TCGTGATGCAGTGAGAGAGT+GGG - chr8_1:15541805-15541824 Msa1181250:intron 50.0%
! CAGGCAATTAATGGCTCTGC+GGG - chr8_1:15542041-15542060 Msa1181250:intron 50.0%
GACAGTATCACATACTGCGG+TGG - chr8_1:15542282-15542301 Msa1181250:CDS 50.0%
CAGTATCACATACTGCGGTG+GGG - chr8_1:15542284-15542303 Msa1181250:CDS 50.0%
AGTATCACATACTGCGGTGG+GGG - chr8_1:15542285-15542304 Msa1181250:CDS 50.0%
! CCTGGTTCAGGTTCGACAAA+TGG + chr8_1:15542689-15542708 None:intergenic 50.0%
CCATTTGTCGAACCTGAACC+AGG - chr8_1:15542686-15542705 Msa1181250:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG - chr8_1:15542973-15542992 Msa1181250:intron 50.0%
TGATTCTGCTCCGGTTGGAA+AGG - chr8_1:15543056-15543075 Msa1181250:CDS 50.0%
TCAGAATCGGCCTTTCCAAC+CGG + chr8_1:15543069-15543088 None:intergenic 50.0%
AAGGCCAGATCTAAAGGCAG+TGG - chr8_1:15543311-15543330 Msa1181250:intron 50.0%
AAAGGCAGTGGCACGAGTAA+AGG - chr8_1:15543323-15543342 Msa1181250:intron 50.0%
AAGGCAGTGGCACGAGTAAA+GGG - chr8_1:15543324-15543343 Msa1181250:intron 50.0%
CAAGTGTGCCTCAAGAAGAG+GGG - chr8_1:15543369-15543388 Msa1181250:intron 50.0%
AAGTGTGCCTCAAGAAGAGG+GGG - chr8_1:15543370-15543389 Msa1181250:intron 50.0%
TTGTGTTCCCCCTCTTCTTG+AGG + chr8_1:15543380-15543399 None:intergenic 50.0%
GCTCTTCTTGGTGAATGCGA+TGG - chr8_1:15543599-15543618 Msa1181250:CDS 50.0%
CTGGTATACCGGAGAAGTTC+TGG - chr8_1:15544069-15544088 Msa1181250:CDS 50.0%
GATGACTGTCGCCGAAGTTA+AGG - chr8_1:15544274-15544293 Msa1181250:CDS 50.0%
CCTTGATAAAGGCAGCTTCC+TGG + chr8_1:15544313-15544332 None:intergenic 50.0%
CCAGGAAGCTGCCTTTATCA+AGG - chr8_1:15544310-15544329 Msa1181250:CDS 50.0%
AAGCTGCCTTTATCAAGGGG+AGG - chr8_1:15544315-15544334 Msa1181250:CDS 50.0%
TCCAATTCTCGTGGTCGGTC+AGG - chr8_1:15539716-15539735 Msa1181250:CDS 55.0%
TCCTGACCGACCACGAGAAT+TGG + chr8_1:15539720-15539739 None:intergenic 55.0%
TCTCGTGGTCGGTCAGGAAA+AGG - chr8_1:15539722-15539741 Msa1181250:CDS 55.0%
ACTGCTTTCACGCTTGGACG+AGG - chr8_1:15539975-15539994 Msa1181250:CDS 55.0%
AGCCGCTTCAGCTGCTATAG+CGG - chr8_1:15540206-15540225 Msa1181250:intron 55.0%
TGCCGCTATAGCAGCTGAAG+CGG + chr8_1:15540211-15540230 None:intergenic 55.0%
CCACCGTAAGCTAACTCAGG+TGG + chr8_1:15540465-15540484 None:intergenic 55.0%
! CCACCTGAGTTAGCTTACGG+TGG - chr8_1:15540462-15540481 Msa1181250:CDS 55.0%
! GTGTTTTTCCGCAAGGGCCA+TGG - chr8_1:15541425-15541444 Msa1181250:CDS 55.0%
! TTTTTCCGCAAGGGCCATGG+CGG - chr8_1:15541428-15541447 Msa1181250:CDS 55.0%
ATCCGAGTCTCGGCAGGAAT+TGG - chr8_1:15541682-15541701 Msa1181250:CDS 55.0%
TGCCAATTCCTGCCGAGACT+CGG + chr8_1:15541687-15541706 None:intergenic 55.0%
! AATGGCTCTGCGGGTTGAGA+AGG - chr8_1:15542050-15542069 Msa1181250:intron 55.0%
! CGTGCCACTGCCTTTAGATC+TGG + chr8_1:15543318-15543337 None:intergenic 55.0%
AGGCAGTGGCACGAGTAAAG+GGG - chr8_1:15543325-15543344 Msa1181250:intron 55.0%
GCGACAGTCATCGTGTCTGA+AGG + chr8_1:15544266-15544285 None:intergenic 55.0%
!! ATCACCATGAGCTGGCTCGC+CGG + chr8_1:15541118-15541137 None:intergenic 60.0%
GCTCTGCTTCATCTCCGCCA+TGG + chr8_1:15541445-15541464 None:intergenic 60.0%
TGGTTCATCCGAGTCTCGGC+AGG - chr8_1:15541676-15541695 Msa1181250:CDS 60.0%
GTCTCGGCAGGAATTGGCAG+TGG - chr8_1:15541688-15541707 Msa1181250:CDS 60.0%
! GCGGGTTGAGAAGGATGCCA+TGG - chr8_1:15542059-15542078 Msa1181250:intron 60.0%
ATCACATACTGCGGTGGGGG+TGG - chr8_1:15542288-15542307 Msa1181250:CDS 60.0%
GGCAGTAGGGGAAGAAGAGC+TGG - chr8_1:15543463-15543482 Msa1181250:CDS 60.0%
! TCGGCGCCGGAATCATCCTC+CGG + chr8_1:15539690-15539709 None:intergenic 65.0%
TGTCGCGGTTCGTCATCGCG+CGG + chr8_1:15540157-15540176 None:intergenic 65.0%
CATCTCCGCCATGGCCCTTG+CGG + chr8_1:15541436-15541455 None:intergenic 65.0%
TCACCGCTACGCTACGCGCG+CGG + chr8_1:15540130-15540149 None:intergenic 70.0%
GAGACCGGCGAGCCAGCTCA+TGG - chr8_1:15541111-15541130 Msa1181250:CDS 70.0%
! CGGCCGCGCGCGTAGCGTAG+CGG - chr8_1:15540124-15540143 Msa1181250:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 15539543 15544509 15539543 ID=Msa1181250;Name=Msa1181250
chr8_1 mRNA 15539543 15544509 15539543 ID=Msa1181250-mRNA-1;Parent=Msa1181250;Name=Msa1181250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=123|0.92|0.92|1|1|1|14|169|1068
chr8_1 exon 15539543 15540200 15539543 ID=Msa1181250-mRNA-1:exon:5842;Parent=Msa1181250-mRNA-1
chr8_1 exon 15540283 15540793 15540283 ID=Msa1181250-mRNA-1:exon:5841;Parent=Msa1181250-mRNA-1
chr8_1 exon 15540883 15541314 15540883 ID=Msa1181250-mRNA-1:exon:5840;Parent=Msa1181250-mRNA-1
chr8_1 exon 15541392 15541544 15541392 ID=Msa1181250-mRNA-1:exon:5839;Parent=Msa1181250-mRNA-1
chr8_1 exon 15541634 15541769 15541634 ID=Msa1181250-mRNA-1:exon:5838;Parent=Msa1181250-mRNA-1
chr8_1 exon 15541842 15542008 15541842 ID=Msa1181250-mRNA-1:exon:5837;Parent=Msa1181250-mRNA-1
chr8_1 exon 15542107 15542464 15542107 ID=Msa1181250-mRNA-1:exon:5836;Parent=Msa1181250-mRNA-1
chr8_1 exon 15542558 15542659 15542558 ID=Msa1181250-mRNA-1:exon:5835;Parent=Msa1181250-mRNA-1
chr8_1 exon 15542758 15542952 15542758 ID=Msa1181250-mRNA-1:exon:5834;Parent=Msa1181250-mRNA-1
chr8_1 exon 15543056 15543136 15543056 ID=Msa1181250-mRNA-1:exon:5833;Parent=Msa1181250-mRNA-1
chr8_1 exon 15543228 15543308 15543228 ID=Msa1181250-mRNA-1:exon:5832;Parent=Msa1181250-mRNA-1
chr8_1 exon 15543398 15543661 15543398 ID=Msa1181250-mRNA-1:exon:5831;Parent=Msa1181250-mRNA-1
chr8_1 exon 15544056 15544130 15544056 ID=Msa1181250-mRNA-1:exon:5830;Parent=Msa1181250-mRNA-1
chr8_1 exon 15544224 15544509 15544224 ID=Msa1181250-mRNA-1:exon:5829;Parent=Msa1181250-mRNA-1
chr8_1 five_prime_UTR 15544387 15544509 15544387 ID=Msa1181250-mRNA-1:five_prime_utr;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15544224 15544386 15544224 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15544056 15544130 15544056 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15543398 15543661 15543398 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15543228 15543308 15543228 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15543056 15543136 15543056 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15542758 15542952 15542758 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15542558 15542659 15542558 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15542107 15542464 15542107 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15541842 15542008 15541842 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15541634 15541769 15541634 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15541392 15541544 15541392 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15540883 15541314 15540883 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15540283 15540793 15540283 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 CDS 15539712 15540200 15539712 ID=Msa1181250-mRNA-1:cds;Parent=Msa1181250-mRNA-1
chr8_1 three_prime_UTR 15539543 15539711 15539543 ID=Msa1181250-mRNA-1:three_prime_utr;Parent=Msa1181250-mRNA-1
Gene Sequence

>Msa1181250

ATGGACGAAGATTTCGATATTCCGGAGGATGATTCCGGCGCCGACGATAATCCAATTCTCGTGGTCGGTCAGGAAAAGGAAATCGGTGATAAAGGTCTGAAGAAGAAGCTTCTCAAAGTAGGTCAAGGTTCGGATACTCCCGACGTTGACGACGAAGTTCACGTTCATCTTACTGGAACGGTGCTCAATGGTATGGAGTTTGAATCTAGCGGAACAACTGCTTTCACGCTTGGACGAGGGCATGTTGTTAAAGGTTTGGCTGATGGTGTGAAAACAATGAAAAAAGGTGAAAAGGCCCTTTTCACCATTCCACCTGAGTTAGCTTACGGTGGATCTGGTTATCTTCCAAAACAGATTCCTCCTAATGCAACTCTGCGATATGATGTTGAGCTACTTTCTTGGTTTAGTGTGGAGGATATATGTAAGGATGGAGGTCTGTTCAAAAGGATACTTAAGAAGGGGGAGAAATGGGAAAATCCCAAGGATCTCGACGAAGTTTTAGTGAATTATGAAGCGCATCTTCTTGATGATGGAAAACTAGTAGCTAAGTCTGATAAAGTAGTGGAGTTCACAGTGAAGGACGGTCATTTTTGTCCTGCATTGTCAATGGCTGTTAGAACTATGAAGAAGGGAGAGGAAGCGGCATTGACTGTGAAGCCTCAATATGGATTCGGTGAGACCGGCGAGCCAGCTCATGGTGATAAAAGTGCAGTACCAGCTAATGCAATATTAGAGATAAAACTTGAGTTAATTTCTTGGAGGACTGTTTTTGATGTAACTGAGGACAAGATGGTTGTAAAAAAGATTATGAAGGAAGGTGAAGGATACAAACGTCCAAAAGATGGAGCTGATGTAAAAGTGAAACTGACTTGTAAGCTTAAAGATGGCACTGTGTTTTTCCGCAAGGGCCATGGCGGAGATGAAGCAGAGCTGTTTGAATTCACAACAGACGAGGGTGAGGCGCAAGTGATTAGAGGGCTTGATAGAGCTGTAATGAGTATGAAGAAGGGTGAGGTAGCATCGTTGACTATTGCACCTAAGTATGGTTTTGGTTCATCCGAGTCTCGGCAGGAATTGGCAGTGGTTCCTGCAAATTCAACCTTACATTATGAGGTTGAGTTAGTATCATTCATAAAGAGGACAGAGGACGAAAAAAGAATCAAGTTTCGTAAGACTCTTCGTGATGCAGTGAGAGAGTGGGCTCAGACCAAACCTAAGAGCGAAAAGAACAAAGATTTCTACCACATCGATTCCCACAAAGTGAAGCTATCAGTTGGAGGAGAAGAAAGATTTCCCATTTTCATTAGAAATTACAAATGGCAATTAATGGCTCTGCGGGTTGAGAAGGATGCCATGGATCTTTATTTTGGCATATATACTATGGGGGGACAAAAGGATAATATACTTCAAGTAGACGGCATCGATTCATTTTTGGTGTCTATTGCAACTCTTCACCCTCACTACAGTCATATGCATCATTTTCATGACAGTATCACATACTGCGGTGGGGGTGGTATCTATTTTTTTGATACGACACATAAAAATGCATATTCAAGTGGGGATAGGAGTTTTGAGGACAGTGAAGGTTTTGTCAATTTTGAAATTCAGGTGCAAGCGATTAGCTCGAAGGTTTATCCTCCTTTCCTTTCATTGACTTACAAAATGGAATTGTTTGAGGCAAACAGAGAATTTGTGCTTGCACAATGTTCTAAGTTTATGAAGGAAAGACAGACAGAGTTGAAGAAAGTAATCAACAATAGTTCTCGCTGGTCAAGTTTATGTGATCTTTTAAAGGATGAAAATTACATAGCTTCACAATTCCAAAGCTTTTCAGTAAAAGCTGATGTGATCAACAAGATGCTGGTGAATACTTTTTATAGAGACGATAAAGGCGAACGATCAAAAAGTAAAGAAGATGGTGGCTTGATAGCTTGTTTGATTTTAGATATGATTCACCAGGGATATGAATTAACCCGCAAAAAGAATAAGAAATGCGAATGTGTCATGTATGATGGTGATGGTGATGGTGATGGTGAGTTTCAGCTGAAAAGGGATTTTTCGGCTATATTTCATAAAGCTGCATGTTTGAAGTATGATTCTGCTCCGGTTGGAAAGGCCGATTCTGATAGCCTAGAGCTCGATTTTGAGCTTCAGGAAAAAATTGGGTGTGTTATGTTGCAACTATTTGTCACCTCATATTTCTTTAGATTGTGCGACTTATTCTTAGATGATTACGTGAAAAACACACCTAAGAAAAAGAAGGCCAGATCTAAAGGCAGTGGCACGAGTAAAGGGGATAAAAGAATGCAGTCCCAAACAAGTGTGCCTCAAGAAGAGGGGGAACACAATGTAGAGACACATGGGCCAAAAACTGCAATGGAAAATGAGGCAGCGAATACAGTGAAAGATGAGGCAGTAGGGGAAGAAGAGCTGGATAATACATTTGTAGATGTTTCTGTCTCAGTCATCAAGAGAGTTATTGATGCTCTCAATGAGACTTATGAATCACACGCTCAACTTGTCAATGATTTTGATGCAAAGATTTCAGCTCTTCTTGGTGAATGCGATGGTACTTATGACGCACATCTGTTGACACAAAAACGAATTGATATCTACAACAAAGCTGCAAGGAATGTAGCTGATTTATATGAAAAGCACTTGTATAAAAAGCACATAAATCCTGATTTCAATTTGGATGTCTGGGCAGATGTCAATAGATCGTTTAAGAAGAGGTATACAATATCAGACGAGCAAGCCAAAAAAATTGGCAAAATAGGAGAGAAGTTGGCTAACGCATACTTAACCGAAAAGTACAATGACAAAAAGAATGATGTTGAGATCCGTTGGCTTAATGAAGTGACCGAGTCAAACGCACCATATGATCTTGCCCTTTTCAAAGGGAAAGATATACTTCGTTACTTTGAGGTGAAAATCACTGGTATACCGGAGAAGTTCTGGTTCTCAGTGACACCTAATGAGATACATTTGGCCGCAAAAAGCGCTGATTTGTATAGTGTAGTGTTCATTAAGGTGAATACTGATTTAAGTGCGGATGTATACGAAATAAAAGATCCATTGTCAAAAGGGAGCGAATTGCAAGCAATTTTAAGGACCAAGAAAGAGGCGAAACCTTCAGACACGATGACTGTCGCCGAAGTTAAGGAGATATTGAATACCCAGGAAGCTGCCTTTATCAAGGGGAGGTGA
Protein sequence

>Msa1181250

MDEDFDIPEDDSGADDNPILVVGQEKEIGDKGLKKKLLKVGQGSDTPDVDDEVHVHLTGTVLNGMEFESSGTTAFTLGRGHVVKGLADGVKTMKKGEKALFTIPPELAYGGSGYLPKQIPPNATLRYDVELLSWFSVEDICKDGGLFKRILKKGEKWENPKDLDEVLVNYEAHLLDDGKLVAKSDKVVEFTVKDGHFCPALSMAVRTMKKGEEAALTVKPQYGFGETGEPAHGDKSAVPANAILEIKLELISWRTVFDVTEDKMVVKKIMKEGEGYKRPKDGADVKVKLTCKLKDGTVFFRKGHGGDEAELFEFTTDEGEAQVIRGLDRAVMSMKKGEVASLTIAPKYGFGSSESRQELAVVPANSTLHYEVELVSFIKRTEDEKRIKFRKTLRDAVREWAQTKPKSEKNKDFYHIDSHKVKLSVGGEERFPIFIRNYKWQLMALRVEKDAMDLYFGIYTMGGQKDNILQVDGIDSFLVSIATLHPHYSHMHHFHDSITYCGGGGIYFFDTTHKNAYSSGDRSFEDSEGFVNFEIQVQAISSKVYPPFLSLTYKMELFEANREFVLAQCSKFMKERQTELKKVINNSSRWSSLCDLLKDENYIASQFQSFSVKADVINKMLVNTFYRDDKGERSKSKEDGGLIACLILDMIHQGYELTRKKNKKCECVMYDGDGDGDGEFQLKRDFSAIFHKAACLKYDSAPVGKADSDSLELDFELQEKIGCVMLQLFVTSYFFRLCDLFLDDYVKNTPKKKKARSKGSGTSKGDKRMQSQTSVPQEEGEHNVETHGPKTAMENEAANTVKDEAVGEEELDNTFVDVSVSVIKRVIDALNETYESHAQLVNDFDAKISALLGECDGTYDAHLLTQKRIDIYNKAARNVADLYEKHLYKKHINPDFNLDVWADVNRSFKKRYTISDEQAKKIGKIGEKLANAYLTEKYNDKKNDVEIRWLNEVTESNAPYDLALFKGKDILRYFEVKITGIPEKFWFSVTPNEIHLAAKSADLYSVVFIKVNTDLSADVYEIKDPLSKGSELQAILRTKKEAKPSDTMTVAEVKEILNTQEAAFIKGR*