AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1181330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181330 MtrunA17_Chr8g0336421 84.171 398 60 2 202 598 1 396 0.0 691
Msa1181330 MtrunA17_Chr8g0336421 33.908 174 103 3 89 252 2 173 2.55e-22 101
Msa1181330 MtrunA17_Chr8g0336421 66.234 77 25 1 730 805 384 460 1.82e-21 99.4
Msa1181330 MtrunA17_Chr8g0339141 74.300 393 85 6 1 381 1 389 1.67e-172 519
Msa1181330 MtrunA17_Chr7g0234801 66.234 385 110 7 1 381 13 381 5.24e-159 483
Msa1181330 MtrunA17_Chr8g0352971 71.304 345 80 7 47 382 14 348 9.64e-154 464
Msa1181330 MtrunA17_Chr8g0352971 35.345 232 142 3 30 256 118 346 1.09e-29 123
Msa1181330 MtrunA17_Chr8g0377771 59.847 391 141 7 1 381 1 385 2.27e-148 456
Msa1181330 MtrunA17_Chr7g0255551 48.179 357 171 6 26 378 15 361 6.20e-93 307
Msa1181330 MtrunA17_Chr8g0338001 61.628 258 91 5 127 381 43 295 4.24e-90 296
Msa1181330 MtrunA17_Chr8g0338001 32.692 260 155 8 16 260 44 298 7.41e-22 99.8
Msa1181330 MtrunA17_Chr8g0352961 51.466 307 103 5 747 1011 3 305 3.55e-87 284
Msa1181330 MtrunA17_Chr8g0338221 47.855 303 85 10 106 367 12 282 9.76e-68 229
Msa1181330 MtrunA17_Chr8g0338221 32.143 168 95 5 80 243 130 282 5.04e-15 77.0
Msa1181330 MtrunA17_Chr1g0152361 46.698 212 108 3 168 378 4 211 6.63e-51 184
Msa1181330 MtrunA17_Chr1g0152361 30.208 192 120 4 71 252 22 209 7.25e-19 90.1
Msa1181330 MtrunA17_Chr8g0345571 53.846 182 49 5 166 318 10 185 1.20e-46 166
Msa1181330 MtrunA17_Chr8g0338181 69.565 115 32 2 268 381 2 114 1.79e-42 152
Msa1181330 MtrunA17_Chr8g0338181 35.088 114 64 2 37 140 2 115 2.92e-11 63.2
Msa1181330 MtrunA17_Chr8g0338191 47.205 161 48 3 129 253 30 189 2.82e-35 133
Msa1181330 MtrunA17_Chr1g0152351 42.949 156 78 4 22 172 52 201 3.67e-32 124
Msa1181330 MtrunA17_Chr1g0152351 36.232 138 71 4 148 280 66 191 4.18e-17 81.3
Msa1181330 MtrunA17_Chr8g0339161 38.095 210 46 6 93 243 1 185 1.66e-27 113
Msa1181330 MtrunA17_Chr4g0027201 26.817 399 242 12 24 395 27 402 4.69e-26 115
Msa1181330 MtrunA17_Chr8g0352981 53.333 90 37 2 649 737 1 86 1.38e-20 87.4
Msa1181330 MtrunA17_Chr8g0338661 80.392 51 10 0 331 381 1 51 2.96e-19 83.6
Msa1181330 MtrunA17_Chr8g0336431 84.444 45 7 0 861 905 15 59 3.10e-19 84.0
Msa1181330 MtrunA17_Chr8g0338061 78.431 51 11 0 331 381 1 51 5.73e-19 82.8
Msa1181330 MtrunA17_Chr8g0338631 77.551 49 11 0 333 381 1 49 2.66e-17 79.7
Msa1181330 MtrunA17_Chr4g0035371 25.385 260 157 7 477 735 96 319 6.31e-17 83.6
Msa1181330 MtrunA17_Chr8g0380881 26.761 213 136 4 523 735 15 207 4.18e-16 82.4
Msa1181330 MtrunA17_Chr1g0179681 38.938 113 55 4 32 133 133 242 4.11e-11 64.7
Msa1181330 MtrunA17_Chr2g0279511 36.364 110 61 4 32 133 2 110 4.42e-11 61.2
Msa1181330 MtrunA17_Chr5g0435521 37.931 116 56 4 29 133 9 119 6.75e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181330 AT3G25230.1 59.770 435 154 9 20 446 28 449 1.93e-153 469
Msa1181330 AT3G25230.2 59.770 435 154 9 20 446 28 449 5.13e-153 468
Msa1181330 AT5G48570.1 64.042 381 125 9 7 381 23 397 7.67e-152 466
Msa1181330 AT3G54010.1 26.613 372 240 11 24 376 25 382 5.57e-24 108
Msa1181330 AT3G54010.2 26.797 306 199 10 82 376 1 292 1.22e-19 94.7
Msa1181330 AT3G54010.2 26.482 253 145 6 30 259 65 299 3.84e-11 67.8
Msa1181330 AT3G10060.1 41.228 114 51 6 32 133 106 215 1.71e-11 65.9

Find 232 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGAGGCACACTTGTT+TGG 0.180375 8_1:+15693735 None:intergenic
GATGCCATGGATCTTTATTT+TGG 0.195786 8_1:-15695023 Msa1181330:CDS
CATAAATCCTGATTTCAATT+TGG 0.226535 8_1:-15693375 Msa1181330:CDS
TTGTCACCTCATATTTCTTT+AGG 0.227122 8_1:-15693951 Msa1181330:intron
TTTGTAATTTCTAATGAAAA+TGG 0.234169 8_1:+15695174 None:intergenic
TTATGTGTAGTTCATCTTAC+TGG 0.238754 8_1:-15697179 Msa1181330:intron
TTTCTATCACAGGCAATTAA+AGG 0.250167 8_1:-15695063 Msa1181330:intron
TTCTTGAGGCACACTTGTTT+GGG 0.250988 8_1:+15693736 None:intergenic
CCTTTCATTGACTTACAAAA+TGG 0.261643 8_1:-15694570 Msa1181330:CDS
TTGAGCAGAAACGAGGGTTT+AGG 0.262187 8_1:+15697525 None:intergenic
TGAAGGTTTCGCCTCTTTCT+TGG 0.264803 8_1:+15692854 None:intergenic
CTGATTTCAATTTGGATGTC+TGG 0.269343 8_1:-15693367 Msa1181330:CDS
GCAAAGATTTCAGCTCTTCT+TGG 0.278062 8_1:-15693512 Msa1181330:CDS
TTTGCAGGGCATGTTGTTAA+AGG 0.282244 8_1:-15696707 Msa1181330:intron
TTTACATCAGCTCCATCTTT+TGG 0.285771 8_1:+15695825 None:intergenic
TGCTTACATGGAAGAGCTTT+GGG 0.290033 8_1:+15691777 None:intergenic
TTGACTATTGCACCTAAGTA+TGG 0.295366 8_1:-15695445 Msa1181330:CDS
CTCATCTCCGTATTCTTTCA+TGG 0.313803 8_1:-15697444 Msa1181330:exon
GAGCCTTAGCCACGGATAAA+TGG 0.321221 8_1:-15692017 Msa1181330:CDS
GCTGGCTTCTATCCATGTTT+AGG 0.322709 8_1:-15691975 Msa1181330:CDS
GCGGCCAAATGTATCTCATT+AGG 0.325000 8_1:+15692996 None:intergenic
ATTGCACCTAAGTATGGTTT+TGG 0.326379 8_1:-15695439 Msa1181330:CDS
TAATGTAAGGTTGAATTTGC+AGG 0.335084 8_1:+15695382 None:intergenic
GCATTAGGAGGAATCTGTTT+TGG 0.336181 8_1:+15696593 None:intergenic
CTGGTATACCGGAGAAGTTC+TGG 0.340430 8_1:-15693031 Msa1181330:CDS
TAAAACTTGAGTTAATTTCT+TGG 0.342019 8_1:-15695923 Msa1181330:CDS
GTATAGTGTAGTGTTCATTA+AGG 0.349583 8_1:-15692958 Msa1181330:CDS
AAAGATGGAGCTGATGTAAA+AGG 0.349633 8_1:-15695822 Msa1181330:intron
TTCTCACCTCCCCTTGATAA+AGG 0.350633 8_1:+15692779 None:intergenic
TCCTGACCGACCACGAGAAT+TGG 0.351199 8_1:+15697374 None:intergenic
ATCCGAGTCTCGGCAGGAAT+TGG 0.367014 8_1:-15695413 Msa1181330:CDS
GATATTCCGGAGGATGATTC+CGG 0.369673 8_1:-15697410 Msa1181330:CDS
GTGCTTACATGGAAGAGCTT+TGG 0.376941 8_1:+15691776 None:intergenic
TGAGCAGAAACGAGGGTTTA+GGG 0.378493 8_1:+15697526 None:intergenic
AAATTCAACCTTACATTATG+AGG 0.380710 8_1:-15695377 Msa1181330:CDS
CCTTGATAAAGGCAGCTTCC+TGG 0.385087 8_1:+15692790 None:intergenic
AAATTCAGGTGCAAGCGATT+AGG 0.389351 8_1:-15694698 Msa1181330:intron
ATGATGTTGAGCTACTTTCT+TGG 0.389571 8_1:-15696559 Msa1181330:CDS
GGACGAAGATTTCGATATTC+CGG 0.390284 8_1:-15697423 Msa1181330:CDS
GAAAAGGAAATCGGTGATAA+AGG 0.391222 8_1:-15697353 Msa1181330:CDS
TCCAATTCTCGTGGTCGGTC+AGG 0.397115 8_1:-15697375 Msa1181330:CDS
ATCTCTAATATTGCATTAGC+TGG 0.406995 8_1:+15695945 None:intergenic
TAAAAGATCCATTGTCAAAA+GGG 0.409120 8_1:-15692902 Msa1181330:CDS
AAGGCAGTGGCACGAGTAAA+GGG 0.411312 8_1:-15693775 Msa1181330:CDS
TTGTAATTTCTAATGAAAAT+GGG 0.414758 8_1:+15695175 None:intergenic
ATGGTGAGTTTCAGCTGAAA+AGG 0.416213 8_1:-15694107 Msa1181330:CDS
GTATATCTTTCCCTTTGAAA+AGG 0.420596 8_1:+15693078 None:intergenic
AAAGGCAGTGGCACGAGTAA+AGG 0.422593 8_1:-15693776 Msa1181330:CDS
GAGTTAGCTTACGGTGGATC+TGG 0.427641 8_1:-15696623 Msa1181330:CDS
CGTGCCACTGCCTTTAGATC+TGG 0.428247 8_1:+15693784 None:intergenic
AGGGCATGTTGTTAAAGGTT+TGG 0.430416 8_1:-15696702 Msa1181330:CDS
TAAAACTTCGTCGAGATCCT+TGG 0.432037 8_1:+15696460 None:intergenic
AACTGATAGCTTCACTTTGT+GGG 0.433097 8_1:+15695216 None:intergenic
CAGACATCCAAATTGAAATC+AGG 0.434061 8_1:+15693368 None:intergenic
GTAGATTCATACGCTGGGGC+TGG 0.434597 8_1:+15691865 None:intergenic
ATGAATTGGAAAGAAGGAAA+TGG 0.437478 8_1:+15697473 None:intergenic
ATAAAAGATCCATTGTCAAA+AGG 0.438306 8_1:-15692903 Msa1181330:CDS
AAAACTTCGTCGAGATCCTT+GGG 0.439920 8_1:+15696461 None:intergenic
CAACTGATAGCTTCACTTTG+TGG 0.440343 8_1:+15695215 None:intergenic
TGGAGCTTGTAGTGCTTACA+TGG 0.440770 8_1:+15691765 None:intergenic
TATATCTTTCCCTTTGAAAA+GGG 0.448199 8_1:+15693079 None:intergenic
GATGACAGTTGCCGAAGTTA+AGG 0.448298 8_1:-15692826 Msa1181330:CDS
TATTGTGTAATAGATGGATT+CGG 0.448405 8_1:-15696008 Msa1181330:intron
CTCAGGTGGAATGGTGAAAA+GGG 0.451099 8_1:+15696643 None:intergenic
TACTTTGAGGTGAAAATCAC+TGG 0.453166 8_1:-15693050 Msa1181330:CDS
ACAACTTGTTGATTAATAGC+TGG 0.455114 8_1:-15691993 Msa1181330:CDS
AGTTAGTATCATTCATAAAG+AGG 0.458318 8_1:-15695351 Msa1181330:CDS
TGAGCAGCGCAAGTGATTAG+AGG 0.462794 8_1:-15695514 Msa1181330:intron
CTTGATAAAGGCAGCTTCCT+GGG 0.465683 8_1:+15692791 None:intergenic
TGCGGGTTAATTCATATCCC+TGG 0.467078 8_1:+15694181 None:intergenic
AGGATGGAGGTCTGTTCAAA+AGG 0.469504 8_1:-15696514 Msa1181330:CDS
ACAATGTTCTAAATTTATGA+AGG 0.470273 8_1:-15694513 Msa1181330:CDS
GGCAGTAGGGGAAGAAGAGC+TGG 0.470847 8_1:-15693636 Msa1181330:CDS
AGCTGTAATGAGTATGAAGA+AGG 0.471234 8_1:-15695482 Msa1181330:CDS
GAGCTCTAGGCTATCAGAAT+CGG 0.473961 8_1:+15694020 None:intergenic
TTGAAAAGGGCAAGATCATA+TGG 0.474752 8_1:+15693092 None:intergenic
TCATATCGCAGAGTTGCATT+AGG 0.476139 8_1:+15696578 None:intergenic
TAGATTCATACGCTGGGGCT+GGG 0.476833 8_1:+15691866 None:intergenic
TGGTTCATCCGAGTCTCGGC+AGG 0.477629 8_1:-15695419 Msa1181330:CDS
ATAGATGGATTCGGTGAGAC+CGG 0.480187 8_1:-15695999 Msa1181330:intron
GGAACAACTGCTTTCACGCT+TGG 0.480449 8_1:-15697122 Msa1181330:CDS
TCAGAATCGGCCTTTCCAAC+CGG 0.481314 8_1:+15694033 None:intergenic
TAGTGTGGAGGATATATGTA+AGG 0.483756 8_1:-15696534 Msa1181330:CDS
TTACAAAATGGAATTGTTTG+AGG 0.484829 8_1:-15694558 Msa1181330:CDS
TCTCGTGGTCGGTCAGGAAA+AGG 0.485887 8_1:-15697369 Msa1181330:CDS
TGATTTCAATTTGGATGTCT+GGG 0.485964 8_1:-15693366 Msa1181330:CDS
GACACCTAATGAGATACATT+TGG 0.486822 8_1:-15693000 Msa1181330:CDS
ACTCAGGTGGAATGGTGAAA+AGG 0.488523 8_1:+15696642 None:intergenic
TCTTCGTCCATGAAAGAATA+CGG 0.489555 8_1:+15697437 None:intergenic
GAGATGAGTGATGAATGAAT+TGG 0.490767 8_1:+15697459 None:intergenic
CCAGGAAGCTGCCTTTATCA+AGG 0.490807 8_1:-15692790 Msa1181330:CDS
AACAAGTGTGCCTCAAGAAG+AGG 0.490940 8_1:-15693732 Msa1181330:CDS
TAACTCAACCTCATAATGTA+AGG 0.492274 8_1:+15695369 None:intergenic
TGCCAATTCCTGCCGAGACT+CGG 0.493588 8_1:+15695411 None:intergenic
GTACCATTTATCCGTGGCTA+AGG 0.494876 8_1:+15692014 None:intergenic
GGCTGTTAGAACTATGAAGA+AGG 0.495009 8_1:-15696153 Msa1181330:CDS
GTTGTTAAAGGTTTGGCTGA+TGG 0.497585 8_1:-15696695 Msa1181330:CDS
CAGTGAAAGATGAGGCAGTA+GGG 0.497590 8_1:-15693649 Msa1181330:CDS
TATGAAGCGCATCTTGATGA+TGG 0.501135 8_1:-15696342 Msa1181330:CDS
AGTTTAAATTTAGCTAGAGC+AGG 0.502422 8_1:+15691817 None:intergenic
AGATATACTTCGTTACTTTG+AGG 0.502998 8_1:-15693063 Msa1181330:CDS
AACTTGAGTTAATTTCTTGG+AGG 0.503226 8_1:-15695920 Msa1181330:CDS
TGAACTTCGTCGTCAACGTC+GGG 0.507770 8_1:+15697287 None:intergenic
GTGGAGGATATATGTAAGGA+TGG 0.507772 8_1:-15696530 Msa1181330:CDS
AAGAAGAAGCTTCTCAAAGT+AGG 0.508102 8_1:-15697326 Msa1181330:CDS
AATGGAAAAGAGGCTGTTGA+GGG 0.508846 8_1:+15697491 None:intergenic
GCTACTTTCTTGGTTTAGTG+TGG 0.510353 8_1:-15696549 Msa1181330:CDS
CATCTCCGCCATGGCCCTTG+CGG 0.512028 8_1:+15695662 None:intergenic
CTGACTTGTAAGCTTAAAGA+TGG 0.513106 8_1:-15695697 Msa1181330:CDS
GGATACAAACGTCCAAAAGA+TGG 0.515267 8_1:-15695837 Msa1181330:CDS
GTTCAAAAGGATACTTAAGA+AGG 0.515459 8_1:-15696501 Msa1181330:CDS
TATGAAGAAGGGAGAGGAAG+CGG 0.515658 8_1:-15696141 Msa1181330:CDS
GGTGAAAATCACTGGTATAC+CGG 0.515792 8_1:-15693042 Msa1181330:CDS
CTTACTGGAACGGTGCTCAA+TGG 0.522170 8_1:-15697164 Msa1181330:CDS
CAGGCAATTAAAGGTTCTGC+GGG 0.522403 8_1:-15695054 Msa1181330:CDS
GTCGGTCAGGAAAAGGAAAT+CGG 0.522453 8_1:-15697362 Msa1181330:CDS
ATTCCACCTGAGTTAGCTTA+CGG 0.523205 8_1:-15696632 Msa1181330:CDS
TGGAACGGTGCTCAATGGTA+TGG 0.523692 8_1:-15697159 Msa1181330:CDS
ATGCATATTCAAGTGGGGAT+AGG 0.524474 8_1:-15694755 Msa1181330:CDS
TTCAAAAGGATACTTAAGAA+GGG 0.525833 8_1:-15696500 Msa1181330:CDS
GAAGCTCAAAATCGAGCTCT+AGG 0.525943 8_1:+15694007 None:intergenic
AAAGGTTCTGCGGGTTGAGA+AGG 0.529648 8_1:-15695045 Msa1181330:CDS
ACAGTATCACATACTGCGGT+GGG 0.531217 8_1:-15694812 Msa1181330:CDS
GACGTTGACGACGAAGTTCA+CGG 0.532365 8_1:-15697284 Msa1181330:intron
AATGAGTATGAAGAAGGGTG+AGG 0.533366 8_1:-15695476 Msa1181330:CDS
TCAAAAGGATACTTAAGAAG+GGG 0.534358 8_1:-15696499 Msa1181330:CDS
TCGGCGCCGGAATCATCCTC+CGG 0.537200 8_1:+15697404 None:intergenic
GCAACTGTCATCGTGTCTGA+AGG 0.537500 8_1:+15692837 None:intergenic
ACTGAGAACCAGAACTTCTC+CGG 0.538982 8_1:+15693023 None:intergenic
ATTCAATATCTCCTTAACTT+CGG 0.539148 8_1:+15692815 None:intergenic
ACTTTCTTGGTTTAGTGTGG+AGG 0.539462 8_1:-15696546 Msa1181330:CDS
GAAAGAAGGAAATGGAAAAG+AGG 0.539959 8_1:+15697481 None:intergenic
TTCGTGATGCAGTGAGAGAG+TGG 0.541336 8_1:-15695291 Msa1181330:CDS
TCTCAAAGTAGGTCAAGGTT+CGG 0.541649 8_1:-15697315 Msa1181330:CDS
TGGTGAGTTTCAGCTGAAAA+GGG 0.542880 8_1:-15694106 Msa1181330:CDS
GTCTCGGCAGGAATTGGCAG+TGG 0.544402 8_1:-15695407 Msa1181330:CDS
ATCACCATGAGCTGGCTCGC+CGG 0.544925 8_1:+15695980 None:intergenic
ACAAGTGTGCCTCAAGAAGA+GGG 0.546572 8_1:-15693731 Msa1181330:CDS
AGAATGATGTTGAGATCCGT+TGG 0.547990 8_1:-15693142 Msa1181330:CDS
GCTGTAATGAGTATGAAGAA+GGG 0.548847 8_1:-15695481 Msa1181330:CDS
GATGGTGATGGTGATGGTGA+TGG 0.549042 8_1:-15694126 Msa1181330:CDS
CAGGAAGCTGCCTTTATCAA+GGG 0.550811 8_1:-15692789 Msa1181330:CDS
GATGAACCAAAACCATACTT+AGG 0.550970 8_1:+15695433 None:intergenic
GTTGTGGAGCTGGAGCATAA+TGG 0.553426 8_1:-15691940 Msa1181330:CDS
TACATGTAGATTCATACGCT+GGG 0.555780 8_1:+15691860 None:intergenic
CACAAAGTGAAGCTATCAGT+TGG 0.558376 8_1:-15695214 Msa1181330:CDS
TAGAACTATGAAGAAGGGAG+AGG 0.561771 8_1:-15696147 Msa1181330:CDS
ATCATATGGTGCGTTTGACT+CGG 0.561982 8_1:+15693106 None:intergenic
AGAGAGTTGAGCAGAAACGA+GGG 0.568178 8_1:+15697519 None:intergenic
ACTGCTTTCACGCTTGGACG+AGG 0.568567 8_1:-15697116 Msa1181330:intron
AATTGGATTATCGTCGGCGC+CGG 0.568573 8_1:+15697391 None:intergenic
ATTCACAACAGACGAGGGTG+AGG 0.569735 8_1:-15695623 Msa1181330:CDS
AAATGGAAAAGAGGCTGTTG+AGG 0.569974 8_1:+15697490 None:intergenic
GTAAGCTAACTCAGGTGGAA+TGG 0.570045 8_1:+15696634 None:intergenic
TGATGAATGAATTGGAAAGA+AGG 0.570411 8_1:+15697467 None:intergenic
ACAATAGTTCTCGCTGGTCA+AGG 0.570760 8_1:-15694460 Msa1181330:intron
TGATTCTGCTCCGGTTGGAA+AGG 0.570959 8_1:-15694043 Msa1181330:CDS
GCTCTTCTTGGTGAATGCGA+TGG 0.571244 8_1:-15693500 Msa1181330:CDS
AGTGAAAGATGAGGCAGTAG+GGG 0.574391 8_1:-15693648 Msa1181330:CDS
AAGTATGATTCTGCTCCGGT+TGG 0.574917 8_1:-15694048 Msa1181330:CDS
TCGTGATGCAGTGAGAGAGT+GGG 0.575149 8_1:-15695290 Msa1181330:CDS
AGTATCACATACTGCGGTGG+GGG 0.578278 8_1:-15694810 Msa1181330:CDS
TTGTAAGTCAATGAAAGGAA+AGG 0.579359 8_1:+15694575 None:intergenic
TATGCCAAAATAAAGATCCA+TGG 0.579628 8_1:+15695019 None:intergenic
TAAGTCAATGAAAGGAAAGG+AGG 0.580130 8_1:+15694578 None:intergenic
ATGTATGATGGTGATGGTGA+TGG 0.584906 8_1:-15694132 Msa1181330:CDS
GAGACCGGCGAGCCAGCTCA+TGG 0.585752 8_1:-15695984 Msa1181330:CDS
CACGAGAATTGGATTATCGT+CGG 0.587461 8_1:+15697385 None:intergenic
GACAGTATCACATACTGCGG+TGG 0.587716 8_1:-15694813 Msa1181330:CDS
TGATGTAACTGAGGACAAGA+TGG 0.590381 8_1:-15695889 Msa1181330:CDS
GAGAGAGTTGAGCAGAAACG+AGG 0.591804 8_1:+15697518 None:intergenic
TATCGCAGAGTTGCATTAGG+AGG 0.592105 8_1:+15696581 None:intergenic
CTACATGTAGATTCATACGC+TGG 0.592632 8_1:+15691859 None:intergenic
GCTGTTAGAACTATGAAGAA+GGG 0.592887 8_1:-15696152 Msa1181330:CDS
GAGCAGCGCAAGTGATTAGA+GGG 0.594805 8_1:-15695513 Msa1181330:intron
AAGGCCAGATCTAAAGGCAG+TGG 0.595229 8_1:-15693788 Msa1181330:CDS
ACAGTGAAAGATGAGGCAGT+AGG 0.595795 8_1:-15693650 Msa1181330:CDS
GCTCTGCTTCATCTCCGCCA+TGG 0.596981 8_1:+15695653 None:intergenic
AGCTAAGTCTGATAAAGTAG+TGG 0.597666 8_1:-15696310 Msa1181330:CDS
TGCGAATGTGTCATGTATGA+TGG 0.598856 8_1:-15694144 Msa1181330:CDS
AAAGTGAAGCTATCAGTTGG+AGG 0.599127 8_1:-15695211 Msa1181330:CDS
TTTGAAGTATGATTCTGCTC+CGG 0.600253 8_1:-15694052 Msa1181330:CDS
GCGGGTTGAGAAGGATGCCA+TGG 0.601649 8_1:-15695036 Msa1181330:CDS
AAGCTTCTCAAAGTAGGTCA+AGG 0.601747 8_1:-15697320 Msa1181330:CDS
GAGGATATATGTAAGGATGG+AGG 0.602521 8_1:-15696527 Msa1181330:CDS
TGATCAACAATAGTTCTCGC+TGG 0.607129 8_1:-15694466 Msa1181330:CDS
CGGTCACTTCATTAAGCCAA+CGG 0.609721 8_1:+15693126 None:intergenic
GAACACAATGTAGAGACACA+TGG 0.609771 8_1:-15693707 Msa1181330:CDS
TGATGTGATCAACAAGATGC+TGG 0.609870 8_1:-15694295 Msa1181330:CDS
AAGATTATGAAGGAAGGTGA+AGG 0.611827 8_1:-15695858 Msa1181330:CDS
ACAGGCAATTAAAGGTTCTG+CGG 0.614166 8_1:-15695055 Msa1181330:intron
TTAAATTTAGCTAGAGCAGG+TGG 0.618645 8_1:+15691820 None:intergenic
AGGCAGTGGCACGAGTAAAG+GGG 0.621931 8_1:-15693774 Msa1181330:CDS
TTTGGCATATATACTATGGG+GGG 0.622304 8_1:-15695005 Msa1181330:CDS
TGTAGTTCATCTTACTGGAA+CGG 0.623849 8_1:-15697174 Msa1181330:intron
CCACCGTAAGCTAACTCAGG+TGG 0.626637 8_1:+15696629 None:intergenic
CTAACAGCCATTGACAATGC+AGG 0.627352 8_1:+15696167 None:intergenic
CCACCTGAGTTAGCTTACGG+TGG 0.631439 8_1:-15696629 Msa1181330:CDS
GCTTACATGGAAGAGCTTTG+GGG 0.631755 8_1:+15691778 None:intergenic
GTTTGAATTCACAACAGACG+AGG 0.632600 8_1:-15695629 Msa1181330:CDS
GATAATATACTTCAAGTAGA+CGG 0.633596 8_1:-15694975 Msa1181330:CDS
ATATCTACAACAAAGCTGCA+AGG 0.633792 8_1:-15693439 Msa1181330:CDS
CAAAAGGATACTTAAGAAGG+GGG 0.634594 8_1:-15696498 Msa1181330:CDS
GTGAACTTCGTCGTCAACGT+CGG 0.638578 8_1:+15697286 None:intergenic
CGAAGATTTCGATATTCCGG+AGG 0.639719 8_1:-15697420 Msa1181330:CDS
AGGAAGCTGCCTTTATCAAG+GGG 0.641760 8_1:-15692788 Msa1181330:CDS
AGTAGTGGAGTTCACAGTGA+AGG 0.642347 8_1:-15696295 Msa1181330:CDS
AAGTGTGCCTCAAGAAGAGG+GGG 0.642862 8_1:-15693729 Msa1181330:CDS
TCACTTTGTGGGAATCGATG+TGG 0.645122 8_1:+15695227 None:intergenic
CGACGATAATCCAATTCTCG+TGG 0.653003 8_1:-15697384 Msa1181330:CDS
TAAGGAGATATTGAATACCC+AGG 0.654146 8_1:-15692808 Msa1181330:CDS
AGCGAATACAGTGAAAGATG+AGG 0.655797 8_1:-15693657 Msa1181330:CDS
TTCACAACAGACGAGGGTGA+GGG 0.656866 8_1:-15695622 Msa1181330:intron
GATCCACCGTAAGCTAACTC+AGG 0.659750 8_1:+15696626 None:intergenic
CAAGTGTGCCTCAAGAAGAG+GGG 0.662488 8_1:-15693730 Msa1181330:CDS
GGTGAATACTGATTTAAGTG+CGG 0.662780 8_1:-15692937 Msa1181330:CDS
CAAGTTGTACCATTTATCCG+TGG 0.664905 8_1:+15692008 None:intergenic
AACACAATGTAGAGACACAT+GGG 0.665142 8_1:-15693706 Msa1181330:CDS
GTGGAGTTCACAGTGAAGGA+CGG 0.666408 8_1:-15696291 Msa1181330:intron
GGAGAAATGGGAAAATCCCA+AGG 0.667575 8_1:-15696477 Msa1181330:CDS
AAGCTGCCTTTATCAAGGGG+AGG 0.668918 8_1:-15692785 Msa1181330:intron
TGTGTCATGTATGATGGTGA+TGG 0.669723 8_1:-15694138 Msa1181330:CDS
TTTGAATTCACAACAGACGA+GGG 0.679151 8_1:-15695628 Msa1181330:CDS
GATGCATATGACTGTAGTGA+GGG 0.684895 8_1:+15694916 None:intergenic
GATAATCCAATTCTCGTGGT+CGG 0.685508 8_1:-15697380 Msa1181330:CDS
CAGTATCACATACTGCGGTG+GGG 0.687869 8_1:-15694811 Msa1181330:CDS
GGTTTACAGAGCCTTAGCCA+CGG 0.691252 8_1:-15692025 Msa1181330:intron
GGTATGGAGTTTGAATCTAG+CGG 0.700618 8_1:-15697143 Msa1181330:CDS
ATCATTCATAAAGAGGACAG+AGG 0.713031 8_1:-15695344 Msa1181330:CDS
ACATGTAGATTCATACGCTG+GGG 0.719970 8_1:+15691861 None:intergenic
TGATGCATATGACTGTAGTG+AGG 0.734024 8_1:+15694915 None:intergenic
GCAGACAGTATCACATACTG+CGG 0.735504 8_1:-15694816 Msa1181330:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTATAAAAACAAATTAAT+AGG + chr8_1:15693767-15693786 None:intergenic 10.0%
!! AATTCAAATAAAATACTATT+AGG + chr8_1:15694489-15694508 None:intergenic 10.0%
!!! TAATAGTATTTTATTTGAAT+TGG - chr8_1:15694488-15694507 Msa1181330:CDS 10.0%
!!! TTAGTTTCTTTATTTGATTT+AGG - chr8_1:15692273-15692292 Msa1181330:intron 15.0%
!! AAATGTTTATATAACACTTT+GGG - chr8_1:15693257-15693276 Msa1181330:intron 15.0%
!!! TTTTTTTATTGTGTAATAGA+TGG - chr8_1:15693314-15693333 Msa1181330:intron 15.0%
!! TTGTAATTTCTAATGAAAAT+GGG + chr8_1:15694156-15694175 None:intergenic 15.0%
!! TTTGTAATTTCTAATGAAAA+TGG + chr8_1:15694157-15694176 None:intergenic 15.0%
!!! TTTTCATTAGAAATTACAAA+TGG - chr8_1:15694157-15694176 Msa1181330:CDS 15.0%
!! AAAACAACATAAACAATAAA+AGG + chr8_1:15694687-15694706 None:intergenic 15.0%
!! TCTTTCACAAAATAAAATTA+AGG + chr8_1:15695426-15695445 None:intergenic 15.0%
!!! TTGGTTATTTTATATTTTAG+TGG - chr8_1:15696819-15696838 Msa1181330:intron 15.0%
!!! ATTTGATTTAGGTTTATGTT+TGG - chr8_1:15692284-15692303 Msa1181330:intron 20.0%
!! CAATCAAATATAGAAACTAA+CGG + chr8_1:15692312-15692331 None:intergenic 20.0%
!! GAAATGTTTATATAACACTT+TGG - chr8_1:15693256-15693275 Msa1181330:intron 20.0%
!! TAAAACTTGAGTTAATTTCT+TGG - chr8_1:15693405-15693424 Msa1181330:CDS 20.0%
!! ATTATCTTAAATTGTTGCAT+TGG - chr8_1:15693731-15693750 Msa1181330:CDS 20.0%
!! ATTAGAAATTACAAATGGTA+TGG - chr8_1:15694162-15694181 Msa1181330:CDS 20.0%
!!! GAATTTTTAGTTAAAGTGTT+TGG - chr8_1:15694188-15694207 Msa1181330:CDS 20.0%
!!! TTATTTTGGCATATATACTA+TGG - chr8_1:15694319-15694338 Msa1181330:CDS 20.0%
!!! TATTTTGGCATATATACTAT+GGG - chr8_1:15694320-15694339 Msa1181330:CDS 20.0%
!! ATAAAAATGCATATTCAAGT+GGG - chr8_1:15694567-15694586 Msa1181330:CDS 20.0%
!!! TTTTGTCAATTTTGAAATTC+AGG - chr8_1:15694616-15694635 Msa1181330:intron 20.0%
!!! ACAATGTTCTAAATTTATGA+AGG - chr8_1:15694815-15694834 Msa1181330:CDS 20.0%
!!! ATTTTACCTAAAGAAATATG+AGG + chr8_1:15695386-15695405 None:intergenic 20.0%
!!! TCGGTTTTGATTTGATTAAT+TGG - chr8_1:15692245-15692264 Msa1181330:intron 25.0%
!! CGTTAGTTTCTATATTTGAT+TGG - chr8_1:15692310-15692329 Msa1181330:intron 25.0%
! AACAATGAAAAAAGGTGAAA+AGG - chr8_1:15692662-15692681 Msa1181330:intron 25.0%
! TTCAAAAGGATACTTAAGAA+GGG - chr8_1:15692828-15692847 Msa1181330:CDS 25.0%
!! TATTGTGTAATAGATGGATT+CGG - chr8_1:15693320-15693339 Msa1181330:intron 25.0%
! GGTTGTAAAAAAGATTATGA+AGG - chr8_1:15693460-15693479 Msa1181330:CDS 25.0%
! GTAAAAAAGATTATGAAGGA+AGG - chr8_1:15693464-15693483 Msa1181330:CDS 25.0%
! AGGTAAATTACCATTGATAA+TGG - chr8_1:15693526-15693545 Msa1181330:CDS 25.0%
! AAATTCAACCTTACATTATG+AGG - chr8_1:15693951-15693970 Msa1181330:intron 25.0%
! AGTTAGTATCATTCATAAAG+AGG - chr8_1:15693977-15693996 Msa1181330:CDS 25.0%
!! TCAATTGATATTTCTATCAC+AGG - chr8_1:15694255-15694274 Msa1181330:CDS 25.0%
!!! ATTTTGGCATATATACTATG+GGG - chr8_1:15694321-15694340 Msa1181330:CDS 25.0%
! GATAATATACTTCAAGTAGA+CGG - chr8_1:15694353-15694372 Msa1181330:CDS 25.0%
! CATAAAAATGCATATTCAAG+TGG - chr8_1:15694566-15694585 Msa1181330:CDS 25.0%
! TAAAAATGCATATTCAAGTG+GGG - chr8_1:15694568-15694587 Msa1181330:CDS 25.0%
! GGTATTTCAACATTTCATAA+TGG - chr8_1:15694651-15694670 Msa1181330:intron 25.0%
! TTACAAAATGGAATTGTTTG+AGG - chr8_1:15694770-15694789 Msa1181330:CDS 25.0%
!! CAGTTTATGTGATCTTTTAA+AGG - chr8_1:15694964-15694983 Msa1181330:CDS 25.0%
!! ACTTTTTATAGAGACGATAA+AGG - chr8_1:15695061-15695080 Msa1181330:intron 25.0%
!! ATTTTAGATATGATTCACCA+GGG - chr8_1:15695130-15695149 Msa1181330:intron 25.0%
! TGTGAAAGATTTACTTAATC+TGG - chr8_1:15695437-15695456 Msa1181330:CDS 25.0%
! GTGAAAGATTTACTTAATCT+GGG - chr8_1:15695438-15695457 Msa1181330:CDS 25.0%
! CATAAATCCTGATTTCAATT+TGG - chr8_1:15695953-15695972 Msa1181330:CDS 25.0%
!! TATATCTTTCCCTTTGAAAA+GGG + chr8_1:15696252-15696271 None:intergenic 25.0%
! ATAAAAGATCCATTGTCAAA+AGG - chr8_1:15696425-15696444 Msa1181330:intron 25.0%
! TAAAAGATCCATTGTCAAAA+GGG - chr8_1:15696426-15696445 Msa1181330:intron 25.0%
! ATTCAATATCTCCTTAACTT+CGG + chr8_1:15696516-15696535 None:intergenic 25.0%
! ATAAAATAACCAACACAGAT+AGG + chr8_1:15696812-15696831 None:intergenic 25.0%
! TTCTTATTGGTCAAAAAAGA+TGG + chr8_1:15697059-15697078 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr8_1:15697072-15697091 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr8_1:15697071-15697090 Msa1181330:intron 25.0%
! TCAATAAAGTTGTCATCAAA+TGG - chr8_1:15697097-15697116 Msa1181330:intron 25.0%
! GACAAAAAGAAAACTGAAAT+TGG + chr8_1:15697209-15697228 None:intergenic 25.0%
! TGTAAACCATATAAGCATAA+GGG + chr8_1:15697291-15697310 None:intergenic 25.0%
ATGAATTGGAAAGAAGGAAA+TGG + chr8_1:15691858-15691877 None:intergenic 30.0%
TGATGAATGAATTGGAAAGA+AGG + chr8_1:15691864-15691883 None:intergenic 30.0%
TTATGTGTAGTTCATCTTAC+TGG - chr8_1:15692149-15692168 Msa1181330:intron 30.0%
TTGATTATAGTAGTCAGTAG+CGG - chr8_1:15692341-15692360 Msa1181330:intron 30.0%
AATTCTGTCTTATCATTGTC+TGG - chr8_1:15692573-15692592 Msa1181330:intron 30.0%
!!! AAGTAATGTGTTGATTTTGC+AGG - chr8_1:15692606-15692625 Msa1181330:intron 30.0%
!!! AGTAATGTGTTGATTTTGCA+GGG - chr8_1:15692607-15692626 Msa1181330:intron 30.0%
GGTGTGAAAACAATGAAAAA+AGG - chr8_1:15692654-15692673 Msa1181330:intron 30.0%
GTTCAAAAGGATACTTAAGA+AGG - chr8_1:15692827-15692846 Msa1181330:CDS 30.0%
TCAAAAGGATACTTAAGAAG+GGG - chr8_1:15692829-15692848 Msa1181330:CDS 30.0%
TAGAGTCACTCAATGAAAAA+TGG + chr8_1:15692917-15692936 None:intergenic 30.0%
! AGTGCGAACAAATTTTATCA+TGG - chr8_1:15693062-15693081 Msa1181330:CDS 30.0%
TGTGTAAAGAACTTACATTG+AGG + chr8_1:15693227-15693246 None:intergenic 30.0%
AAGTTCTTTACACAACACTT+TGG - chr8_1:15693233-15693252 Msa1181330:intron 30.0%
AGTTCTTTACACAACACTTT+GGG - chr8_1:15693234-15693253 Msa1181330:intron 30.0%
ATCTCTAATATTGCATTAGC+TGG + chr8_1:15693386-15693405 None:intergenic 30.0%
AACTTGAGTTAATTTCTTGG+AGG - chr8_1:15693408-15693427 Msa1181330:CDS 30.0%
AAGAAAAGAGCCATTATCAA+TGG + chr8_1:15693539-15693558 None:intergenic 30.0%
TAATGTAAGGTTGAATTTGC+AGG + chr8_1:15693949-15693968 None:intergenic 30.0%
TAACTCAACCTCATAATGTA+AGG + chr8_1:15693962-15693981 None:intergenic 30.0%
TTTCTATCACAGGCAATTAA+AGG - chr8_1:15694265-15694284 Msa1181330:CDS 30.0%
TATGCCAAAATAAAGATCCA+TGG + chr8_1:15694312-15694331 None:intergenic 30.0%
! TTTTGGCATATATACTATGG+GGG - chr8_1:15694322-15694341 Msa1181330:CDS 30.0%
! AGTCATATGCATCATTTTCA+TGG - chr8_1:15694422-15694441 Msa1181330:intron 30.0%
TTGTAAGTCAATGAAAGGAA+AGG + chr8_1:15694756-15694775 None:intergenic 30.0%
! CCATTTTGTAAGTCAATGAA+AGG + chr8_1:15694761-15694780 None:intergenic 30.0%
!! CCTTTCATTGACTTACAAAA+TGG - chr8_1:15694758-15694777 Msa1181330:CDS 30.0%
ATCATAAATATATCAGTGCC+TGG + chr8_1:15694936-15694955 None:intergenic 30.0%
CGATCAAAAAGTAAAGAAGA+TGG - chr8_1:15695088-15695107 Msa1181330:intron 30.0%
TCAAAAAGTAAAGAAGATGG+TGG - chr8_1:15695091-15695110 Msa1181330:intron 30.0%
! GATTTTAGATATGATTCACC+AGG - chr8_1:15695129-15695148 Msa1181330:intron 30.0%
! GCATTTCTTATTCTTTTTGC+GGG + chr8_1:15695167-15695186 None:intergenic 30.0%
! CGCATTTCTTATTCTTTTTG+CGG + chr8_1:15695168-15695187 None:intergenic 30.0%
TTTGAGCTTCAGGAAAAAAT+TGG - chr8_1:15695334-15695353 Msa1181330:CDS 30.0%
TTGAGCTTCAGGAAAAAATT+GGG - chr8_1:15695335-15695354 Msa1181330:CDS 30.0%
TTGTCACCTCATATTTCTTT+AGG - chr8_1:15695377-15695396 Msa1181330:CDS 30.0%
! TCTGGGTTTTTCTTGATTTT+TGG - chr8_1:15695455-15695474 Msa1181330:CDS 30.0%
AAACACACCTAAGAAAAAGA+AGG - chr8_1:15695521-15695540 Msa1181330:intron 30.0%
! TCATTTTCCATTGCAGTTTT+TGG + chr8_1:15695648-15695667 None:intergenic 30.0%
AAAAACTGCAATGGAAAATG+AGG - chr8_1:15695647-15695666 Msa1181330:CDS 30.0%
TGATTTCAATTTGGATGTCT+GGG - chr8_1:15695962-15695981 Msa1181330:CDS 30.0%
AGCCAAAAAATTGGCAAAAT+AGG - chr8_1:15696116-15696135 Msa1181330:intron 30.0%
! CTCCTATTTTGCCAATTTTT+TGG + chr8_1:15696121-15696140 None:intergenic 30.0%
! CTCTTTGTCATTGTACTTTT+CGG + chr8_1:15696168-15696187 None:intergenic 30.0%
! GTATATCTTTCCCTTTGAAA+AGG + chr8_1:15696253-15696272 None:intergenic 30.0%
! AGATATACTTCGTTACTTTG+AGG - chr8_1:15696265-15696284 Msa1181330:intron 30.0%
GTATAGTGTAGTGTTCATTA+AGG - chr8_1:15696370-15696389 Msa1181330:intron 30.0%
!! AATTTTAAGGACCAAGAAAG+AGG - chr8_1:15696463-15696482 Msa1181330:CDS 30.0%
AGTAGTATTTCCTGCAAAAA+AGG + chr8_1:15696688-15696707 None:intergenic 30.0%
TAACCAACACAGTTTAGTAA+AGG + chr8_1:15696853-15696872 None:intergenic 30.0%
AATAAGTGTTCACTAATGAG+TGG - chr8_1:15696897-15696916 Msa1181330:intron 30.0%
!!! GATATTTTGACAACCACTTT+TGG - chr8_1:15696961-15696980 Msa1181330:intron 30.0%
! AATTGGAGTGGTAAACATTT+TGG + chr8_1:15697192-15697211 None:intergenic 30.0%
AAAGAAAACTGAAATTGGAG+TGG + chr8_1:15697204-15697223 None:intergenic 30.0%
TATTTCCCCTTATGCTTATA+TGG - chr8_1:15697282-15697301 Msa1181330:intron 30.0%
GTAAACCATATAAGCATAAG+GGG + chr8_1:15697290-15697309 None:intergenic 30.0%
CTGTAAACCATATAAGCATA+AGG + chr8_1:15697292-15697311 None:intergenic 30.0%
!! ACAACTTGTTGATTAATAGC+TGG - chr8_1:15697335-15697354 Msa1181330:CDS 30.0%
ATCCATGTTTAGGAAAAAGT+TGG - chr8_1:15697363-15697382 Msa1181330:CDS 30.0%
TCCATGTTTAGGAAAAAGTT+GGG - chr8_1:15697364-15697383 Msa1181330:CDS 30.0%
AGTTTAAATTTAGCTAGAGC+AGG + chr8_1:15697514-15697533 None:intergenic 30.0%
GAAAGAAGGAAATGGAAAAG+AGG + chr8_1:15691850-15691869 None:intergenic 35.0%
GAGATGAGTGATGAATGAAT+TGG + chr8_1:15691872-15691891 None:intergenic 35.0%
TCTTCGTCCATGAAAGAATA+CGG + chr8_1:15691894-15691913 None:intergenic 35.0%
GAAAAGGAAATCGGTGATAA+AGG - chr8_1:15691975-15691994 Msa1181330:CDS 35.0%
AAGAAGAAGCTTCTCAAAGT+AGG - chr8_1:15692002-15692021 Msa1181330:CDS 35.0%
TGTAGTTCATCTTACTGGAA+CGG - chr8_1:15692154-15692173 Msa1181330:intron 35.0%
! ATGATGTTGAGCTACTTTCT+TGG - chr8_1:15692769-15692788 Msa1181330:intron 35.0%
TAGTGTGGAGGATATATGTA+AGG - chr8_1:15692794-15692813 Msa1181330:CDS 35.0%
CAAAAGGATACTTAAGAAGG+GGG - chr8_1:15692830-15692849 Msa1181330:CDS 35.0%
AATTCACTGCAACAACAGAA+GGG + chr8_1:15692967-15692986 None:intergenic 35.0%
TAATTCACTGCAACAACAGA+AGG + chr8_1:15692968-15692987 None:intergenic 35.0%
AGCTAAGTCTGATAAAGTAG+TGG - chr8_1:15693018-15693037 Msa1181330:CDS 35.0%
TATAATGTTCACCATGAGAC+AGG - chr8_1:15693128-15693147 Msa1181330:CDS 35.0%
! TTTTTGTCCTGCATTGTCAA+TGG - chr8_1:15693154-15693173 Msa1181330:CDS 35.0%
GCTGTTAGAACTATGAAGAA+GGG - chr8_1:15693176-15693195 Msa1181330:intron 35.0%
!!! GACTGTTTTTGATGTAACTG+AGG - chr8_1:15693430-15693449 Msa1181330:CDS 35.0%
AAGATTATGAAGGAAGGTGA+AGG - chr8_1:15693470-15693489 Msa1181330:CDS 35.0%
! TTTACATCAGCTCCATCTTT+TGG + chr8_1:15693506-15693525 None:intergenic 35.0%
AAAGATGGAGCTGATGTAAA+AGG - chr8_1:15693506-15693525 Msa1181330:CDS 35.0%
! CTGACTTGTAAGCTTAAAGA+TGG - chr8_1:15693631-15693650 Msa1181330:CDS 35.0%
TTTGAATTCACAACAGACGA+GGG - chr8_1:15693700-15693719 Msa1181330:CDS 35.0%
AGCTGTAATGAGTATGAAGA+AGG - chr8_1:15693846-15693865 Msa1181330:intron 35.0%
GCTGTAATGAGTATGAAGAA+GGG - chr8_1:15693847-15693866 Msa1181330:intron 35.0%
TTGACTATTGCACCTAAGTA+TGG - chr8_1:15693883-15693902 Msa1181330:intron 35.0%
! ATTGCACCTAAGTATGGTTT+TGG - chr8_1:15693889-15693908 Msa1181330:intron 35.0%
GATGAACCAAAACCATACTT+AGG + chr8_1:15693898-15693917 None:intergenic 35.0%
ATCATTCATAAAGAGGACAG+AGG - chr8_1:15693984-15694003 Msa1181330:CDS 35.0%
! TCTTTGTTCTTTTCGCTCTT+AGG + chr8_1:15694075-15694094 None:intergenic 35.0%
AACTGATAGCTTCACTTTGT+GGG + chr8_1:15694115-15694134 None:intergenic 35.0%
!! GATGCCATGGATCTTTATTT+TGG - chr8_1:15694305-15694324 Msa1181330:CDS 35.0%
TTTGGCATATATACTATGGG+GGG - chr8_1:15694323-15694342 Msa1181330:CDS 35.0%
TAAGTCAATGAAAGGAAAGG+AGG + chr8_1:15694753-15694772 None:intergenic 35.0%
! CAGCTTTTACTGAAAAGCTT+TGG + chr8_1:15695015-15695034 None:intergenic 35.0%
! TCAGCTGAAAAGGGATTTTT+CGG - chr8_1:15695231-15695250 Msa1181330:CDS 35.0%
! TTTGAAGTATGATTCTGCTC+CGG - chr8_1:15695276-15695295 Msa1181330:CDS 35.0%
AAAAAGAAGGCCAGATCTAA+AGG - chr8_1:15695534-15695553 Msa1181330:intron 35.0%
AACACAATGTAGAGACACAT+GGG - chr8_1:15695622-15695641 Msa1181330:intron 35.0%
ATATCTACAACAAAGCTGCA+AGG - chr8_1:15695889-15695908 Msa1181330:CDS 35.0%
CAGACATCCAAATTGAAATC+AGG + chr8_1:15695963-15695982 None:intergenic 35.0%
CTGATTTCAATTTGGATGTC+TGG - chr8_1:15695961-15695980 Msa1181330:CDS 35.0%
GCAATGACAAGAAAGCAAAA+AGG + chr8_1:15696059-15696078 None:intergenic 35.0%
TTGAAAAGGGCAAGATCATA+TGG + chr8_1:15696239-15696258 None:intergenic 35.0%
! TATGATCTTGCCCTTTTCAA+AGG - chr8_1:15696239-15696258 Msa1181330:intron 35.0%
! ATGATCTTGCCCTTTTCAAA+GGG - chr8_1:15696240-15696259 Msa1181330:intron 35.0%
!! TACTTTGAGGTGAAAATCAC+TGG - chr8_1:15696278-15696297 Msa1181330:intron 35.0%
GACACCTAATGAGATACATT+TGG - chr8_1:15696328-15696347 Msa1181330:CDS 35.0%
!! ATACAAATCAGCGCTTTTTG+CGG + chr8_1:15696354-15696373 None:intergenic 35.0%
!! GGTGAATACTGATTTAAGTG+CGG - chr8_1:15696391-15696410 Msa1181330:intron 35.0%
! GCGAATTGCAAGCAATTTTA+AGG - chr8_1:15696450-15696469 Msa1181330:intron 35.0%
TAAGGAGATATTGAATACCC+AGG - chr8_1:15696520-15696539 Msa1181330:CDS 35.0%
! TGAGAAAATTTAGGGTGTGT+GGG - chr8_1:15696566-15696585 Msa1181330:CDS 35.0%
!!! ATACTCTTGTCCTTTTTTGC+AGG - chr8_1:15696675-15696694 Msa1181330:CDS 35.0%
!! CATTTTGGTACTGTTCACTT+TGG - chr8_1:15696782-15696801 Msa1181330:intron 35.0%
!!! TTTGGTTTTCCTATCTGTGT+TGG - chr8_1:15696800-15696819 Msa1181330:intron 35.0%
!! AACCACTTTTGGACAACTTT+TGG - chr8_1:15696972-15696991 Msa1181330:intron 35.0%
AAAGATGGAGAGAGAGAAAA+AGG + chr8_1:15697044-15697063 None:intergenic 35.0%
ATGTTCAAAAGAGACACTGA+AGG - chr8_1:15697140-15697159 Msa1181330:CDS 35.0%
CCATGTTTAGGAAAAAGTTG+GGG - chr8_1:15697365-15697384 Msa1181330:CDS 35.0%
CATGTTTAGGAAAAAGTTGG+GGG - chr8_1:15697366-15697385 Msa1181330:CDS 35.0%
TACATGTAGATTCATACGCT+GGG + chr8_1:15697471-15697490 None:intergenic 35.0%
TTAAATTTAGCTAGAGCAGG+TGG + chr8_1:15697511-15697530 None:intergenic 35.0%
AATGGAAAAGAGGCTGTTGA+GGG + chr8_1:15691840-15691859 None:intergenic 40.0%
AAATGGAAAAGAGGCTGTTG+AGG + chr8_1:15691841-15691860 None:intergenic 40.0%
CTCATCTCCGTATTCTTTCA+TGG - chr8_1:15691884-15691903 Msa1181330:CDS 40.0%
GGACGAAGATTTCGATATTC+CGG - chr8_1:15691905-15691924 Msa1181330:CDS 40.0%
CACGAGAATTGGATTATCGT+CGG + chr8_1:15691946-15691965 None:intergenic 40.0%
GATAATCCAATTCTCGTGGT+CGG - chr8_1:15691948-15691967 Msa1181330:CDS 40.0%
AAGCTTCTCAAAGTAGGTCA+AGG - chr8_1:15692008-15692027 Msa1181330:CDS 40.0%
TCTCAAAGTAGGTCAAGGTT+CGG - chr8_1:15692013-15692032 Msa1181330:CDS 40.0%
GGTATGGAGTTTGAATCTAG+CGG - chr8_1:15692185-15692204 Msa1181330:intron 40.0%
TTTGCAGGGCATGTTGTTAA+AGG - chr8_1:15692621-15692640 Msa1181330:intron 40.0%
AGGGCATGTTGTTAAAGGTT+TGG - chr8_1:15692626-15692645 Msa1181330:intron 40.0%
GTTGTTAAAGGTTTGGCTGA+TGG - chr8_1:15692633-15692652 Msa1181330:intron 40.0%
! ATTCCACCTGAGTTAGCTTA+CGG - chr8_1:15692696-15692715 Msa1181330:intron 40.0%
! GCATTAGGAGGAATCTGTTT+TGG + chr8_1:15692738-15692757 None:intergenic 40.0%
TCATATCGCAGAGTTGCATT+AGG + chr8_1:15692753-15692772 None:intergenic 40.0%
! GCTACTTTCTTGGTTTAGTG+TGG - chr8_1:15692779-15692798 Msa1181330:intron 40.0%
ACTTTCTTGGTTTAGTGTGG+AGG - chr8_1:15692782-15692801 Msa1181330:intron 40.0%
GTGGAGGATATATGTAAGGA+TGG - chr8_1:15692798-15692817 Msa1181330:CDS 40.0%
GAGGATATATGTAAGGATGG+AGG - chr8_1:15692801-15692820 Msa1181330:CDS 40.0%
TACTTAAGAAGGGGGAGAAA+TGG - chr8_1:15692838-15692857 Msa1181330:CDS 40.0%
ACTTAAGAAGGGGGAGAAAT+GGG - chr8_1:15692839-15692858 Msa1181330:CDS 40.0%
AAAACTTCGTCGAGATCCTT+GGG + chr8_1:15692870-15692889 None:intergenic 40.0%
TAAAACTTCGTCGAGATCCT+TGG + chr8_1:15692871-15692890 None:intergenic 40.0%
! AAGGATCTCGACGAAGTTTT+AGG - chr8_1:15692870-15692889 Msa1181330:CDS 40.0%
TATGAAGCGCATCTTGATGA+TGG - chr8_1:15692986-15693005 Msa1181330:CDS 40.0%
GACAAAAATGACCTGTCTCA+TGG + chr8_1:15693142-15693161 None:intergenic 40.0%
GGCTGTTAGAACTATGAAGA+AGG - chr8_1:15693175-15693194 Msa1181330:intron 40.0%
TAGAACTATGAAGAAGGGAG+AGG - chr8_1:15693181-15693200 Msa1181330:intron 40.0%
TGATGTAACTGAGGACAAGA+TGG - chr8_1:15693439-15693458 Msa1181330:CDS 40.0%
GGATACAAACGTCCAAAAGA+TGG - chr8_1:15693491-15693510 Msa1181330:CDS 40.0%
GTTTGAATTCACAACAGACG+AGG - chr8_1:15693699-15693718 Msa1181330:CDS 40.0%
CAACAGACATTCACTTTCGT+TGG + chr8_1:15693791-15693810 None:intergenic 40.0%
AATGAGTATGAAGAAGGGTG+AGG - chr8_1:15693852-15693871 Msa1181330:intron 40.0%
! GTTCTTTTCGCTCTTAGGTT+TGG + chr8_1:15694070-15694089 None:intergenic 40.0%
CAACTGATAGCTTCACTTTG+TGG + chr8_1:15694116-15694135 None:intergenic 40.0%
CACAAAGTGAAGCTATCAGT+TGG - chr8_1:15694114-15694133 Msa1181330:CDS 40.0%
AAAGTGAAGCTATCAGTTGG+AGG - chr8_1:15694117-15694136 Msa1181330:CDS 40.0%
ACAGGCAATTAAAGGTTCTG+CGG - chr8_1:15694273-15694292 Msa1181330:CDS 40.0%
ATATACTATGGGGGGACAAA+AGG - chr8_1:15694331-15694350 Msa1181330:CDS 40.0%
!!! AGACGGCATCGATTCATTTT+TGG - chr8_1:15694370-15694389 Msa1181330:intron 40.0%
GATGCATATGACTGTAGTGA+GGG + chr8_1:15694415-15694434 None:intergenic 40.0%
TGATGCATATGACTGTAGTG+AGG + chr8_1:15694416-15694435 None:intergenic 40.0%
ATGCATATTCAAGTGGGGAT+AGG - chr8_1:15694573-15694592 Msa1181330:CDS 40.0%
AAATTCAGGTGCAAGCGATT+AGG - chr8_1:15694630-15694649 Msa1181330:intron 40.0%
! GTTTTTGATCAACAGCTCGA+AGG - chr8_1:15694722-15694741 Msa1181330:CDS 40.0%
TGATCAACAATAGTTCTCGC+TGG - chr8_1:15694862-15694881 Msa1181330:intron 40.0%
AATATATCAGTGCCTGGTTC+AGG + chr8_1:15694930-15694949 None:intergenic 40.0%
TGATGTGATCAACAAGATGC+TGG - chr8_1:15695033-15695052 Msa1181330:CDS 40.0%
TGCGAATGTGTCATGTATGA+TGG - chr8_1:15695184-15695203 Msa1181330:CDS 40.0%
! TGTGTCATGTATGATGGTGA+TGG - chr8_1:15695190-15695209 Msa1181330:CDS 40.0%
!! ATGTATGATGGTGATGGTGA+TGG - chr8_1:15695196-15695215 Msa1181330:CDS 40.0%
ATGGTGAGTTTCAGCTGAAA+AGG - chr8_1:15695221-15695240 Msa1181330:CDS 40.0%
TGGTGAGTTTCAGCTGAAAA+GGG - chr8_1:15695222-15695241 Msa1181330:CDS 40.0%
!! GATCTGGCCTTCTTTTTCTT+AGG + chr8_1:15695531-15695550 None:intergenic 40.0%
TTCTTGAGGCACACTTGTTT+GGG + chr8_1:15695595-15695614 None:intergenic 40.0%
GAACACAATGTAGAGACACA+TGG - chr8_1:15695621-15695640 Msa1181330:intron 40.0%
AGCGAATACAGTGAAAGATG+AGG - chr8_1:15695671-15695690 Msa1181330:CDS 40.0%
GCAAAGATTTCAGCTCTTCT+TGG - chr8_1:15695816-15695835 Msa1181330:intron 40.0%
CATTGCAGTCGTTTAAGAAG+AGG - chr8_1:15696073-15696092 Msa1181330:intron 40.0%
AGACGAGCAAGCCAAAAAAT+TGG - chr8_1:15696107-15696126 Msa1181330:intron 40.0%
TGGCAAAATAGGAGAGAAGT+TGG - chr8_1:15696127-15696146 Msa1181330:CDS 40.0%
AGAATGATGTTGAGATCCGT+TGG - chr8_1:15696186-15696205 Msa1181330:intron 40.0%
ATCATATGGTGCGTTTGACT+CGG + chr8_1:15696225-15696244 None:intergenic 40.0%
GGTGAAAATCACTGGTATAC+CGG - chr8_1:15696286-15696305 Msa1181330:intron 40.0%
! AATTCGCTCCCTTTTGACAA+TGG + chr8_1:15696437-15696456 None:intergenic 40.0%
AAGGGGAGGTGAGAAAATTT+AGG - chr8_1:15696557-15696576 Msa1181330:CDS 40.0%
AGGGGAGGTGAGAAAATTTA+GGG - chr8_1:15696558-15696577 Msa1181330:CDS 40.0%
! GTGAGAAAATTTAGGGTGTG+TGG - chr8_1:15696565-15696584 Msa1181330:CDS 40.0%
! GAGAAAATTTAGGGTGTGTG+GGG - chr8_1:15696567-15696586 Msa1181330:CDS 40.0%
GAGCCTTTACTAAACTGTGT+TGG - chr8_1:15696847-15696866 Msa1181330:intron 40.0%
TGGATCTGTTTCAGAGTTGT+GGG - chr8_1:15696917-15696936 Msa1181330:intron 40.0%
GTCCAAAAGTTGTCCAAAAG+TGG + chr8_1:15696977-15696996 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr8_1:15697034-15697053 None:intergenic 40.0%
! AAAAGAGACACTGAAGGTGT+TGG - chr8_1:15697146-15697165 Msa1181330:CDS 40.0%
CAAGTTGTACCATTTATCCG+TGG + chr8_1:15697323-15697342 None:intergenic 40.0%
!! CCCCAACTTTTTCCTAAACA+TGG + chr8_1:15697368-15697387 None:intergenic 40.0%
ACATGTAGATTCATACGCTG+GGG + chr8_1:15697470-15697489 None:intergenic 40.0%
CTACATGTAGATTCATACGC+TGG + chr8_1:15697472-15697491 None:intergenic 40.0%
TGAGCAGAAACGAGGGTTTA+GGG + chr8_1:15691805-15691824 None:intergenic 45.0%
TTGAGCAGAAACGAGGGTTT+AGG + chr8_1:15691806-15691825 None:intergenic 45.0%
AGAGAGTTGAGCAGAAACGA+GGG + chr8_1:15691812-15691831 None:intergenic 45.0%
CGAAGATTTCGATATTCCGG+AGG - chr8_1:15691908-15691927 Msa1181330:CDS 45.0%
GATATTCCGGAGGATGATTC+CGG - chr8_1:15691918-15691937 Msa1181330:CDS 45.0%
CGACGATAATCCAATTCTCG+TGG - chr8_1:15691944-15691963 Msa1181330:CDS 45.0%
GTCGGTCAGGAAAAGGAAAT+CGG - chr8_1:15691966-15691985 Msa1181330:CDS 45.0%
TGGACGAGGTGCGTATTAAT+CGG - chr8_1:15692226-15692245 Msa1181330:intron 45.0%
CTCAGGTGGAATGGTGAAAA+GGG + chr8_1:15692688-15692707 None:intergenic 45.0%
ACTCAGGTGGAATGGTGAAA+AGG + chr8_1:15692689-15692708 None:intergenic 45.0%
GTAAGCTAACTCAGGTGGAA+TGG + chr8_1:15692697-15692716 None:intergenic 45.0%
TATCGCAGAGTTGCATTAGG+AGG + chr8_1:15692750-15692769 None:intergenic 45.0%
AGGATGGAGGTCTGTTCAAA+AGG - chr8_1:15692814-15692833 Msa1181330:CDS 45.0%
GGAGAAATGGGAAAATCCCA+AGG - chr8_1:15692851-15692870 Msa1181330:CDS 45.0%
! AGTAGTGGAGTTCACAGTGA+AGG - chr8_1:15693033-15693052 Msa1181330:CDS 45.0%
CTAACAGCCATTGACAATGC+AGG + chr8_1:15693164-15693183 None:intergenic 45.0%
TATGAAGAAGGGAGAGGAAG+CGG - chr8_1:15693187-15693206 Msa1181330:intron 45.0%
!! ATAGATGGATTCGGTGAGAC+CGG - chr8_1:15693329-15693348 Msa1181330:intron 45.0%
! GCACTTTTATCACCATGAGC+TGG + chr8_1:15693359-15693378 None:intergenic 45.0%
!!! GTTTTGGTTCATCCGAGTCT+CGG - chr8_1:15693905-15693924 Msa1181330:intron 45.0%
TCACTTTGTGGGAATCGATG+TGG + chr8_1:15694104-15694123 None:intergenic 45.0%
CAGGCAATTAAAGGTTCTGC+GGG - chr8_1:15694274-15694293 Msa1181330:CDS 45.0%
GCAGACAGTATCACATACTG+CGG - chr8_1:15694512-15694531 Msa1181330:CDS 45.0%
ACAGTATCACATACTGCGGT+GGG - chr8_1:15694516-15694535 Msa1181330:CDS 45.0%
! AAGTGGGGATAGGAGTTTTG+AGG - chr8_1:15694583-15694602 Msa1181330:CDS 45.0%
!!! AGGAGTTTTGAGGACAGTGA+AGG - chr8_1:15694593-15694612 Msa1181330:CDS 45.0%
ACAATAGTTCTCGCTGGTCA+AGG - chr8_1:15694868-15694887 Msa1181330:intron 45.0%
CAGGTTCGACAAATGGCTTA+TGG + chr8_1:15694911-15694930 None:intergenic 45.0%
! TGCGGGTTAATTCATATCCC+TGG + chr8_1:15695150-15695169 None:intergenic 45.0%
AAGTATGATTCTGCTCCGGT+TGG - chr8_1:15695280-15695299 Msa1181330:CDS 45.0%
!! GAGCTCTAGGCTATCAGAAT+CGG + chr8_1:15695311-15695330 None:intergenic 45.0%
GAAGCTCAAAATCGAGCTCT+AGG + chr8_1:15695324-15695343 None:intergenic 45.0%
! AGAGCTCGATTTTGAGCTTC+AGG - chr8_1:15695324-15695343 Msa1181330:CDS 45.0%
CTTCTTGAGGCACACTTGTT+TGG + chr8_1:15695596-15695615 None:intergenic 45.0%
AACAAGTGTGCCTCAAGAAG+AGG - chr8_1:15695596-15695615 Msa1181330:intron 45.0%
ACAAGTGTGCCTCAAGAAGA+GGG - chr8_1:15695597-15695616 Msa1181330:intron 45.0%
ACATGGGCCAAAAACTGCAA+TGG - chr8_1:15695638-15695657 Msa1181330:CDS 45.0%
ACAGTGAAAGATGAGGCAGT+AGG - chr8_1:15695678-15695697 Msa1181330:CDS 45.0%
CAGTGAAAGATGAGGCAGTA+GGG - chr8_1:15695679-15695698 Msa1181330:CDS 45.0%
AGTGAAAGATGAGGCAGTAG+GGG - chr8_1:15695680-15695699 Msa1181330:CDS 45.0%
CGGTCACTTCATTAAGCCAA+CGG + chr8_1:15696205-15696224 None:intergenic 45.0%
ACTGAGAACCAGAACTTCTC+CGG + chr8_1:15696308-15696327 None:intergenic 45.0%
GCGGCCAAATGTATCTCATT+AGG + chr8_1:15696335-15696354 None:intergenic 45.0%
TGAAGGTTTCGCCTCTTTCT+TGG + chr8_1:15696477-15696496 None:intergenic 45.0%
GATGACAGTTGCCGAAGTTA+AGG - chr8_1:15696502-15696521 Msa1181330:CDS 45.0%
CTTGATAAAGGCAGCTTCCT+GGG + chr8_1:15696540-15696559 None:intergenic 45.0%
CAGGAAGCTGCCTTTATCAA+GGG - chr8_1:15696539-15696558 Msa1181330:CDS 45.0%
AGGAAGCTGCCTTTATCAAG+GGG - chr8_1:15696540-15696559 Msa1181330:CDS 45.0%
TTCTCACCTCCCCTTGATAA+AGG + chr8_1:15696552-15696571 None:intergenic 45.0%
GTGGATCTGTTTCAGAGTTG+TGG - chr8_1:15696916-15696935 Msa1181330:intron 45.0%
GTACCATTTATCCGTGGCTA+AGG + chr8_1:15697317-15697336 None:intergenic 45.0%
! GCTGGCTTCTATCCATGTTT+AGG - chr8_1:15697353-15697372 Msa1181330:CDS 45.0%
TAGGAAAAAGTTGGGGGTTG+TGG - chr8_1:15697372-15697391 Msa1181330:CDS 45.0%
GAGAGAGTTGAGCAGAAACG+AGG + chr8_1:15691813-15691832 None:intergenic 50.0%
AATTGGATTATCGTCGGCGC+CGG + chr8_1:15691940-15691959 None:intergenic 50.0%
TGAACTTCGTCGTCAACGTC+GGG + chr8_1:15692044-15692063 None:intergenic 50.0%
GTGAACTTCGTCGTCAACGT+CGG + chr8_1:15692045-15692064 None:intergenic 50.0%
GACGTTGACGACGAAGTTCA+CGG - chr8_1:15692044-15692063 Msa1181330:intron 50.0%
CTTACTGGAACGGTGCTCAA+TGG - chr8_1:15692164-15692183 Msa1181330:intron 50.0%
TGGAACGGTGCTCAATGGTA+TGG - chr8_1:15692169-15692188 Msa1181330:intron 50.0%
GGAACAACTGCTTTCACGCT+TGG - chr8_1:15692206-15692225 Msa1181330:intron 50.0%
CGCTACAACGATTAGTGTCG+CGG + chr8_1:15692409-15692428 None:intergenic 50.0%
CGCGACACTAATCGTTGTAG+CGG - chr8_1:15692407-15692426 Msa1181330:intron 50.0%
CACTAATCGTTGTAGCGGTG+CGG - chr8_1:15692412-15692431 Msa1181330:intron 50.0%
GATCCACCGTAAGCTAACTC+AGG + chr8_1:15692705-15692724 None:intergenic 50.0%
! GAGTTAGCTTACGGTGGATC+TGG - chr8_1:15692705-15692724 Msa1181330:intron 50.0%
GTGGAGTTCACAGTGAAGGA+CGG - chr8_1:15693037-15693056 Msa1181330:CDS 50.0%
! TGGCACTGTGTTTTTCCGCA+AGG - chr8_1:15693651-15693670 Msa1181330:CDS 50.0%
! GGCACTGTGTTTTTCCGCAA+GGG - chr8_1:15693652-15693671 Msa1181330:CDS 50.0%
ATTCACAACAGACGAGGGTG+AGG - chr8_1:15693705-15693724 Msa1181330:CDS 50.0%
TTCACAACAGACGAGGGTGA+GGG - chr8_1:15693706-15693725 Msa1181330:CDS 50.0%
TGAGCAGCGCAAGTGATTAG+AGG - chr8_1:15693814-15693833 Msa1181330:CDS 50.0%
GAGCAGCGCAAGTGATTAGA+GGG - chr8_1:15693815-15693834 Msa1181330:CDS 50.0%
TTCGTGATGCAGTGAGAGAG+TGG - chr8_1:15694037-15694056 Msa1181330:CDS 50.0%
TCGTGATGCAGTGAGAGAGT+GGG - chr8_1:15694038-15694057 Msa1181330:CDS 50.0%
! AAAGGTTCTGCGGGTTGAGA+AGG - chr8_1:15694283-15694302 Msa1181330:CDS 50.0%
GACAGTATCACATACTGCGG+TGG - chr8_1:15694515-15694534 Msa1181330:CDS 50.0%
CAGTATCACATACTGCGGTG+GGG - chr8_1:15694517-15694536 Msa1181330:CDS 50.0%
AGTATCACATACTGCGGTGG+GGG - chr8_1:15694518-15694537 Msa1181330:CDS 50.0%
! CCTGGTTCAGGTTCGACAAA+TGG + chr8_1:15694918-15694937 None:intergenic 50.0%
CCATTTGTCGAACCTGAACC+AGG - chr8_1:15694915-15694934 Msa1181330:CDS 50.0%
!! GATGGTGATGGTGATGGTGA+TGG - chr8_1:15695202-15695221 Msa1181330:CDS 50.0%
TGATTCTGCTCCGGTTGGAA+AGG - chr8_1:15695285-15695304 Msa1181330:CDS 50.0%
TCAGAATCGGCCTTTCCAAC+CGG + chr8_1:15695298-15695317 None:intergenic 50.0%
AAGGCCAGATCTAAAGGCAG+TGG - chr8_1:15695540-15695559 Msa1181330:intron 50.0%
AAAGGCAGTGGCACGAGTAA+AGG - chr8_1:15695552-15695571 Msa1181330:intron 50.0%
AAGGCAGTGGCACGAGTAAA+GGG - chr8_1:15695553-15695572 Msa1181330:intron 50.0%
CAAGTGTGCCTCAAGAAGAG+GGG - chr8_1:15695598-15695617 Msa1181330:intron 50.0%
AAGTGTGCCTCAAGAAGAGG+GGG - chr8_1:15695599-15695618 Msa1181330:intron 50.0%
TTGTGTTCCCCCTCTTCTTG+AGG + chr8_1:15695609-15695628 None:intergenic 50.0%
GCTCTTCTTGGTGAATGCGA+TGG - chr8_1:15695828-15695847 Msa1181330:CDS 50.0%
CTGGTATACCGGAGAAGTTC+TGG - chr8_1:15696297-15696316 Msa1181330:CDS 50.0%
GCAACTGTCATCGTGTCTGA+AGG + chr8_1:15696494-15696513 None:intergenic 50.0%
CCTTGATAAAGGCAGCTTCC+TGG + chr8_1:15696541-15696560 None:intergenic 50.0%
CCAGGAAGCTGCCTTTATCA+AGG - chr8_1:15696538-15696557 Msa1181330:CDS 50.0%
AAGCTGCCTTTATCAAGGGG+AGG - chr8_1:15696543-15696562 Msa1181330:CDS 50.0%
GGTTTACAGAGCCTTAGCCA+CGG - chr8_1:15697303-15697322 Msa1181330:CDS 50.0%
GAGCCTTAGCCACGGATAAA+TGG - chr8_1:15697311-15697330 Msa1181330:CDS 50.0%
GTTGTGGAGCTGGAGCATAA+TGG - chr8_1:15697388-15697407 Msa1181330:CDS 50.0%
TAGATTCATACGCTGGGGCT+GGG + chr8_1:15697465-15697484 None:intergenic 50.0%
TCCAATTCTCGTGGTCGGTC+AGG - chr8_1:15691953-15691972 Msa1181330:CDS 55.0%
TCCTGACCGACCACGAGAAT+TGG + chr8_1:15691957-15691976 None:intergenic 55.0%
TCTCGTGGTCGGTCAGGAAA+AGG - chr8_1:15691959-15691978 Msa1181330:CDS 55.0%
ACTGCTTTCACGCTTGGACG+AGG - chr8_1:15692212-15692231 Msa1181330:intron 55.0%
AGCCGCTTCAGCTGCTATAG+CGG - chr8_1:15692443-15692462 Msa1181330:intron 55.0%
TGCCGCTATAGCAGCTGAAG+CGG + chr8_1:15692448-15692467 None:intergenic 55.0%
CCACCGTAAGCTAACTCAGG+TGG + chr8_1:15692702-15692721 None:intergenic 55.0%
! CCACCTGAGTTAGCTTACGG+TGG - chr8_1:15692699-15692718 Msa1181330:intron 55.0%
! GTGTTTTTCCGCAAGGGCCA+TGG - chr8_1:15693658-15693677 Msa1181330:CDS 55.0%
! TTTTTCCGCAAGGGCCATGG+CGG - chr8_1:15693661-15693680 Msa1181330:CDS 55.0%
ATCCGAGTCTCGGCAGGAAT+TGG - chr8_1:15693915-15693934 Msa1181330:intron 55.0%
TGCCAATTCCTGCCGAGACT+CGG + chr8_1:15693920-15693939 None:intergenic 55.0%
! CGTGCCACTGCCTTTAGATC+TGG + chr8_1:15695547-15695566 None:intergenic 55.0%
AGGCAGTGGCACGAGTAAAG+GGG - chr8_1:15695554-15695573 Msa1181330:intron 55.0%
AAAGTTGGGGGTTGTGGAGC+TGG - chr8_1:15697378-15697397 Msa1181330:CDS 55.0%
GTAGATTCATACGCTGGGGC+TGG + chr8_1:15697466-15697485 None:intergenic 55.0%
!! ATCACCATGAGCTGGCTCGC+CGG + chr8_1:15693351-15693370 None:intergenic 60.0%
GCTCTGCTTCATCTCCGCCA+TGG + chr8_1:15693678-15693697 None:intergenic 60.0%
TGGTTCATCCGAGTCTCGGC+AGG - chr8_1:15693909-15693928 Msa1181330:intron 60.0%
GTCTCGGCAGGAATTGGCAG+TGG - chr8_1:15693921-15693940 Msa1181330:intron 60.0%
! GCGGGTTGAGAAGGATGCCA+TGG - chr8_1:15694292-15694311 Msa1181330:CDS 60.0%
ATCACATACTGCGGTGGGGG+TGG - chr8_1:15694521-15694540 Msa1181330:CDS 60.0%
GGCAGTAGGGGAAGAAGAGC+TGG - chr8_1:15695692-15695711 Msa1181330:CDS 60.0%
! TCGGCGCCGGAATCATCCTC+CGG + chr8_1:15691927-15691946 None:intergenic 65.0%
TGTCGCGGTTCGTCATCGCG+CGG + chr8_1:15692394-15692413 None:intergenic 65.0%
CATCTCCGCCATGGCCCTTG+CGG + chr8_1:15693669-15693688 None:intergenic 65.0%
TCACCGCTACGCTACGCGCG+CGG + chr8_1:15692367-15692386 None:intergenic 70.0%
GAGACCGGCGAGCCAGCTCA+TGG - chr8_1:15693344-15693363 Msa1181330:intron 70.0%
! CGGCCGCGCGCGTAGCGTAG+CGG - chr8_1:15692361-15692380 Msa1181330:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 15691780 15697570 15691780 ID=Msa1181330;Name=Msa1181330
chr8_1 mRNA 15691780 15697570 15691780 ID=Msa1181330-mRNA-1;Parent=Msa1181330;Name=Msa1181330-mRNA-1;_AED=0.11;_eAED=0.13;_QI=123|0.78|0.8|0.93|1|1|15|0|1121
chr8_1 exon 15691780 15692038 15691780 ID=Msa1181330-mRNA-1:exon:5951;Parent=Msa1181330-mRNA-1
chr8_1 exon 15692786 15693177 15692786 ID=Msa1181330-mRNA-1:exon:5950;Parent=Msa1181330-mRNA-1
chr8_1 exon 15693352 15693862 15693352 ID=Msa1181330-mRNA-1:exon:5949;Parent=Msa1181330-mRNA-1
chr8_1 exon 15693952 15694383 15693952 ID=Msa1181330-mRNA-1:exon:5948;Parent=Msa1181330-mRNA-1
chr8_1 exon 15694461 15694613 15694461 ID=Msa1181330-mRNA-1:exon:5947;Parent=Msa1181330-mRNA-1
chr8_1 exon 15694699 15694834 15694699 ID=Msa1181330-mRNA-1:exon:5946;Parent=Msa1181330-mRNA-1
chr8_1 exon 15694907 15695073 15694907 ID=Msa1181330-mRNA-1:exon:5945;Parent=Msa1181330-mRNA-1
chr8_1 exon 15695172 15695529 15695172 ID=Msa1181330-mRNA-1:exon:5944;Parent=Msa1181330-mRNA-1
chr8_1 exon 15695623 15695724 15695623 ID=Msa1181330-mRNA-1:exon:5943;Parent=Msa1181330-mRNA-1
chr8_1 exon 15695823 15696017 15695823 ID=Msa1181330-mRNA-1:exon:5942;Parent=Msa1181330-mRNA-1
chr8_1 exon 15696120 15696200 15696120 ID=Msa1181330-mRNA-1:exon:5941;Parent=Msa1181330-mRNA-1
chr8_1 exon 15696292 15696369 15696292 ID=Msa1181330-mRNA-1:exon:5940;Parent=Msa1181330-mRNA-1
chr8_1 exon 15696459 15696722 15696459 ID=Msa1181330-mRNA-1:exon:5939;Parent=Msa1181330-mRNA-1
chr8_1 exon 15697117 15697191 15697117 ID=Msa1181330-mRNA-1:exon:5938;Parent=Msa1181330-mRNA-1
chr8_1 exon 15697285 15697570 15697285 ID=Msa1181330-mRNA-1:exon:5937;Parent=Msa1181330-mRNA-1
chr8_1 five_prime_UTR 15697448 15697570 15697448 ID=Msa1181330-mRNA-1:five_prime_utr;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15697285 15697447 15697285 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15697117 15697191 15697117 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15696459 15696722 15696459 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15696292 15696369 15696292 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15696120 15696200 15696120 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15695823 15696017 15695823 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15695623 15695724 15695623 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15695172 15695529 15695172 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15694907 15695073 15694907 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15694699 15694834 15694699 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15694461 15694613 15694461 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15693952 15694383 15693952 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15693352 15693862 15693352 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15692786 15693177 15692786 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
chr8_1 CDS 15691780 15692038 15691780 ID=Msa1181330-mRNA-1:cds;Parent=Msa1181330-mRNA-1
Gene Sequence

>Msa1181330

ATGGACGAAGATTTCGATATTCCGGAGGATGATTCCGGCGCCGACGATAATCCAATTCTCGTGGTCGGTCAGGAAAAGGAAATCGGTGATAAAGGTCTGAAGAAGAAGCTTCTCAAAGTAGGTCAAGGTTCGGATACTCCCGACGTTGACGACGAAGTTCACGTTCATCTTACTGGAACGGTGCTCAATGGTATGGAGTTTGAATCTAGCGGAACAACTGCTTTCACGCTTGGACGAGGGCATGTTGTTAAAGGTTTGGCTGATGGTGTGAAAACAATGAAAAAAGGTGAAAAGGCCCTTTTCACCATTCCACCTGAGTTAGCTTACGGTGGATCTGGTTATCTTCCAAAACAGATTCCTCCTAATGCAACTCTGCGATATGATGTTGAGCTACTTTCTTGGTTTAGTGTGGAGGATATATGTAAGGATGGAGGTCTGTTCAAAAGGATACTTAAGAAGGGGGAGAAATGGGAAAATCCCAAGGATCTCGACGAAGTTTTAGTGAATTATGAAGCGCATCTTGATGATGGAAAACTAGTAGCTAAGTCTGATAAAGTAGTGGAGTTCACAGTGAAGGACGGTCATTTTTGTCCTGCATTGTCAATGGCTGTTAGAACTATGAAGAAGGGAGAGGAAGCGGCATTGACTGTGAAGCCTCAATATGGATTCGGTGAGACCGGCGAGCCAGCTCATGGTGATAAAAGTGCAGTACCAGCTAATGCAATATTAGAGATAAAACTTGAGTTAATTTCTTGGAGGACTGTTTTTGATGTAACTGAGGACAAGATGGTTGTAAAAAAGATTATGAAGGAAGGTGAAGGATACAAACGTCCAAAAGATGGAGCTGATGTAAAAGTGAAACTGACTTGTAAGCTTAAAGATGGCACTGTGTTTTTCCGCAAGGGCCATGGCGGAGATGAAGCAGAGCTGTTTGAATTCACAACAGACGAGGGTGAGGCGCAAGTGATTAGAGGGCTTGATAGAGCTGTAATGAGTATGAAGAAGGGTGAGGTAGCATCATTGACTATTGCACCTAAGTATGGTTTTGGTTCATCCGAGTCTCGGCAGGAATTGGCAGTGGTTCCTGCAAATTCAACCTTACATTATGAGGTTGAGTTAGTATCATTCATAAAGAGGACAGAGGACGAAAAAAGAATCAAGTTTCGTAAGACTCTTCGTGATGCAGTGAGAGAGTGGGCTCAGACCAAACCTAAGAGCGAAAAGAACAAAGATTTCTACCACATCGATTCCCACAAAGTGAAGCTATCAGTTGGAGGAGAAGAAAGATTTCCCATTTTCATTAGAAATTACAAATGGCAATTAAAGGTTCTGCGGGTTGAGAAGGATGCCATGGATCTTTATTTTGGCATATATACTATGGGGGGACAAAAGGATAATATACTTCAAGTAGACGGCATCGATTCATTTTTGGTGTCTATTGCAACTCTTCACCCTCACTACAGTCATATGCATCATTTTCATGACAGTATCACATACTGCGGTGGGGGTGGTATCTATTTTTTTGATACGACACATAAAAATGCATATTCAAGTGGGGATAGGAGTTTTGAGGACAGTGAAGGTTTTGTCAATTTTGAAATTCAGGTGCAAGCGATTAGCTCGAAGGTTTATCCTCCTTTCCTTTCATTGACTTACAAAATGGAATTGTTTGAGGCAAACAGAGAATTTGTGCTTGCACAATGTTCTAAATTTATGAAGGAAAGACAGACAGAGTTGAAGAAAGTGATCAACAATAGTTCTCGCTGGTCAAGTTTATGTGATCTTTTAAAGGATGAAAATTACATAGCTTCACAATTCCAAAGCTTTTCAGTAAAAGCTGATGTGATCAACAAGATGCTGGTGAATACTTTTTATAGAGACGATAAAGGCGAACGATCAAAAAGTAAAGAAGATGGTGGCTTGATAGCTTGTTTGATTTTAGATATGATTCACCAGGGATATGAATTAACCCGCAAAAAGAATAAGAAATGCGAATGTGTCATGTATGATGGTGATGGTGATGGTGATGGTGAGTTTCAGCTGAAAAGGGATTTTTCGGCTATATTTCATAAAGCTGCATGTTTGAAGTATGATTCTGCTCCGGTTGGAAAGGCCGATTCTGATAGCCTAGAGCTCGATTTTGAGCTTCAGGAAAAAATTGGGTGTGTTATGTTGCAACTATTTGTCACCTCATATTTCTTTAGATTGTGCGACTTATTCTTAGATGATTACGTGAAAAACACACCTAAGAAAAAGAAGGCCAGATCTAAAGGCAGTGGCACGAGTAAAGGGGATAAAAGAATGCAGTCCCAAACAAGTGTGCCTCAAGAAGAGGGGGAACACAATGTAGAGACACATGGGCCAAAAACTGCAATGGAAAATGAGGCAGCGAATACAGTGAAAGATGAGGCAGTAGGGGAAGAAGAGCTGGATAATACATTTGTAGATGTTTCTGTCTCAGTCATCAAGAGAGTTATTGATGCTCTCAATGAGACTTATGAATCACACGCTCAACTTGTCAATGATTTTGATGCAAAGATTTCAGCTCTTCTTGGTGAATGCGATGGTACTTATGACGCATATCTGTTGACACAAAAACGAATTGATATCTACAACAAAGCTGCAAGGAATGTAGCTGATTTATATGAAAAGCACTTGTATAAAAAGCACATAAATCCTGATTTCAATTTGGATGTCTGGGCAGATGTCAATAGATACAATGACAAAGAGAATGATGTTGAGATCCGTTGGCTTAATGAAGTGACCGAGTCAAACGCACCATATGATCTTGCCCTTTTCAAAGGGAAAGATATACTTCGTTACTTTGAGGTGAAAATCACTGGTATACCGGAGAAGTTCTGGTTCTCAGTGACACCTAATGAGATACATTTGGCCGCAAAAAGCGCTGATTTGTATAGTGTAGTGTTCATTAAGGTGAATACTGATTTAAGTGCGGATGTATACGAAATAAAAGATCCATTGTCAAAAGGGAGCGAATTGCAAGCAATTTTAAGGACCAAGAAAGAGGCGAAACCTTCAGACACGATGACAGTTGCCGAAGTTAAGGAGATATTGAATACCCAGGAAGCTGCCTTTATCAAGGGGAGAGCCTTAGCCACGGATAAATGGTACAACTTGTTGATTAATAGCTGGCTTCTATCCATGTTTAGGAAAAAGTTGGGGGTTGTGGAGCTGGAGCATAATGGCTTTGCTTCATTGTTTGACTCATACGCTTATAGAACAAATGCTTTTCTGTTCCCAGCCCCAGCGTATGAATCTACATGTAGTTCAATATGTCTGAAACCACCTGCTCTAGCTAAATTTAAACTTTTTAAATTTAAAACACCCCAAAGCTCTTCCATGTAA
Protein sequence

>Msa1181330

MDEDFDIPEDDSGADDNPILVVGQEKEIGDKGLKKKLLKVGQGSDTPDVDDEVHVHLTGTVLNGMEFESSGTTAFTLGRGHVVKGLADGVKTMKKGEKALFTIPPELAYGGSGYLPKQIPPNATLRYDVELLSWFSVEDICKDGGLFKRILKKGEKWENPKDLDEVLVNYEAHLDDGKLVAKSDKVVEFTVKDGHFCPALSMAVRTMKKGEEAALTVKPQYGFGETGEPAHGDKSAVPANAILEIKLELISWRTVFDVTEDKMVVKKIMKEGEGYKRPKDGADVKVKLTCKLKDGTVFFRKGHGGDEAELFEFTTDEGEAQVIRGLDRAVMSMKKGEVASLTIAPKYGFGSSESRQELAVVPANSTLHYEVELVSFIKRTEDEKRIKFRKTLRDAVREWAQTKPKSEKNKDFYHIDSHKVKLSVGGEERFPIFIRNYKWQLKVLRVEKDAMDLYFGIYTMGGQKDNILQVDGIDSFLVSIATLHPHYSHMHHFHDSITYCGGGGIYFFDTTHKNAYSSGDRSFEDSEGFVNFEIQVQAISSKVYPPFLSLTYKMELFEANREFVLAQCSKFMKERQTELKKVINNSSRWSSLCDLLKDENYIASQFQSFSVKADVINKMLVNTFYRDDKGERSKSKEDGGLIACLILDMIHQGYELTRKKNKKCECVMYDGDGDGDGEFQLKRDFSAIFHKAACLKYDSAPVGKADSDSLELDFELQEKIGCVMLQLFVTSYFFRLCDLFLDDYVKNTPKKKKARSKGSGTSKGDKRMQSQTSVPQEEGEHNVETHGPKTAMENEAANTVKDEAVGEEELDNTFVDVSVSVIKRVIDALNETYESHAQLVNDFDAKISALLGECDGTYDAYLLTQKRIDIYNKAARNVADLYEKHLYKKHINPDFNLDVWADVNRYNDKENDVEIRWLNEVTESNAPYDLALFKGKDILRYFEVKITGIPEKFWFSVTPNEIHLAAKSADLYSVVFIKVNTDLSADVYEIKDPLSKGSELQAILRTKKEAKPSDTMTVAEVKEILNTQEAAFIKGRALATDKWYNLLINSWLLSMFRKKLGVVELEHNGFASLFDSYAYRTNAFLFPAPAYESTCSSICLKPPALAKFKLFKFKTPQSSSM*