Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849360 | AES88571.1 | 91.489 | 47 | 4 | 0 | 89 | 135 | 3 | 49 | 2.00e-20 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849360 | G7JNE1 | 91.489 | 47 | 4 | 0 | 89 | 135 | 3 | 49 | 9.55e-21 | 90.1 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0735170 | Msa0849360 | 0.802170 | 6.369189e-49 | -8.615850e-47 |
| Msa0766630 | Msa0849360 | 0.811480 | 6.855232e-51 | -8.615850e-47 |
| Msa0811080 | Msa0849360 | 0.808884 | 2.486477e-50 | -8.615850e-47 |
| Msa0131770 | Msa0849360 | 0.802331 | 5.902893e-49 | -8.615850e-47 |
| Msa0384800 | Msa0849360 | 0.809631 | 1.720011e-50 | -8.615850e-47 |
| Msa0846350 | Msa0849360 | 0.801903 | 7.226952e-49 | -8.615850e-47 |
| Msa0849360 | Msa1014540 | 0.801501 | 8.738960e-49 | -8.615850e-47 |
| Msa0849360 | Msa1024240 | 0.803134 | 4.030227e-49 | -8.615850e-47 |
| Msa0849360 | Msa1075650 | 0.814304 | 1.649069e-51 | -8.615850e-47 |
| Msa0849360 | Msa1092990 | 0.801538 | 8.590656e-49 | -8.615850e-47 |
| Msa0849360 | Msa1284680 | 0.814076 | 1.852332e-51 | -8.615850e-47 |
| Msa0849360 | Msa1373030 | 0.804734 | 1.873867e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849360 | MtrunA17_Chr4g0029081 | 91.304 | 46 | 4 | 0 | 90 | 135 | 1 | 46 | 1.37e-23 | 87.8 |
| Msa0849360 | MtrunA17_Chr7g0262291 | 83.673 | 49 | 8 | 0 | 89 | 137 | 3 | 51 | 4.65e-22 | 84.0 |
| Msa0849360 | MtrunA17_Chr5g0447831 | 73.469 | 49 | 13 | 0 | 89 | 137 | 374 | 422 | 3.31e-15 | 72.4 |
| Msa0849360 | MtrunA17_Chr5g0448131 | 75.510 | 49 | 12 | 0 | 89 | 137 | 373 | 421 | 1.90e-14 | 70.1 |
| Msa0849360 | MtrunA17_Chr4g0056011 | 61.224 | 49 | 19 | 0 | 89 | 137 | 374 | 422 | 2.11e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 40 sgRNAs with CRISPR-Local
Find 502 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCACTTCATTTCCTAAT+TGG | 0.200158 | 5_4:+35991193 | Msa0849360:CDS |
| AACTTTATCTGCTACCTCTA+AGG | 0.240338 | 5_4:+35997526 | Msa0849360:CDS |
| GTAACAACAATTTAGAGATT+TGG | 0.250966 | 5_4:+35997958 | Msa0849360:three_prime_UTR |
| TCATTTGGAAGTTAGGGTTT+TGG | 0.282679 | 5_4:+35989369 | Msa0849360:CDS |
| TGTCACTTGGAAGTGGTAAC+TGG | 0.298673 | 5_4:+35989410 | Msa0849360:CDS |
| ACATATTCGCTGAACCAATT+AGG | 0.313086 | 5_4:-35991207 | None:intergenic |
| TCGATTCCCTTCCATGTGTT+TGG | 0.351862 | 5_4:-35990459 | None:intergenic |
| GAATAATGTCTAAGCTAAAT+AGG | 0.357719 | 5_4:-35997862 | None:intergenic |
| AACCTTTGGTTCTCCCTTAG+AGG | 0.373418 | 5_4:-35997540 | None:intergenic |
| GTGTAGCAATAGCATGGATT+TGG | 0.417144 | 5_4:-35997646 | None:intergenic |
| TGAGCTAATTAACAAAGCTT+CGG | 0.427143 | 5_4:-35997884 | None:intergenic |
| TCATTAACTAGTGAAACCTT+TGG | 0.437784 | 5_4:-35997554 | None:intergenic |
| ATTGGTTCAGCGAATATGTA+TGG | 0.443878 | 5_4:+35991211 | Msa0849360:CDS |
| TAAAGTTGGAAATGATAACT+TGG | 0.486133 | 5_4:-35997510 | None:intergenic |
| GTTAGAGAAGGTTGCTCGCA+AGG | 0.495688 | 5_4:+35991012 | Msa0849360:CDS |
| GTCACTTGGAAGTGGTAACT+GGG | 0.499275 | 5_4:+35989411 | Msa0849360:CDS |
| ACTTTATCTGCTACCTCTAA+GGG | 0.517376 | 5_4:+35997527 | Msa0849360:CDS |
| GAGAATGATAATGTAAATGA+AGG | 0.520490 | 5_4:+35997927 | Msa0849360:three_prime_UTR |
| AATGATAATGTAAATGAAGG+AGG | 0.528558 | 5_4:+35997930 | Msa0849360:three_prime_UTR |
| TGTAGAAAGTCTCAGGTAGT+TGG | 0.529603 | 5_4:+35991151 | Msa0849360:intron |
| AAAGTTGGAAATGATAACTT+GGG | 0.529921 | 5_4:-35997509 | None:intergenic |
| ATGATAATGTAAATGAAGGA+GGG | 0.540562 | 5_4:+35997931 | Msa0849360:three_prime_UTR |
| TAGGAAACCAAACACATGGA+AGG | 0.545476 | 5_4:+35990452 | Msa0849360:CDS |
| TAGCAATAGCATGGATTTGG+AGG | 0.546543 | 5_4:-35997643 | None:intergenic |
| TTAGAGGTAGCAGATAAAGT+TGG | 0.559547 | 5_4:-35997524 | None:intergenic |
| AGGAAACCAAACACATGGAA+GGG | 0.565035 | 5_4:+35990453 | Msa0849360:CDS |
| TGATAATGTAAATGAAGGAG+GGG | 0.567534 | 5_4:+35997932 | Msa0849360:three_prime_UTR |
| GGAAATGATAACTTGGGTTG+TGG | 0.573827 | 5_4:-35997503 | None:intergenic |
| CAATAGCATGGATTTGGAGG+CGG | 0.581791 | 5_4:-35997640 | None:intergenic |
| CAAGATTGTCTCTGCTAAGG+TGG | 0.587585 | 5_4:+35997613 | Msa0849360:CDS |
| GAGCAAGATTGTCTCTGCTA+AGG | 0.587903 | 5_4:+35997610 | Msa0849360:CDS |
| GAACCAATTAGGAAATGAAG+TGG | 0.591788 | 5_4:-35991196 | None:intergenic |
| ACATCTCACGCAGCAAACTG+TGG | 0.599029 | 5_4:-35990511 | None:intergenic |
| TTACATGTGTAGCAATAGCA+TGG | 0.607729 | 5_4:-35997652 | None:intergenic |
| GATGAATATACAAGAGATAG+CGG | 0.614273 | 5_4:+35997583 | Msa0849360:CDS |
| AAGGTTTCACTAGTTAATGA+CGG | 0.614585 | 5_4:+35997557 | Msa0849360:CDS |
| TACCTCTAAGGGAGAACCAA+AGG | 0.617875 | 5_4:+35997538 | Msa0849360:CDS |
| AGGTAGTTGGTGATGTCATG+AGG | 0.618411 | 5_4:+35991164 | Msa0849360:intron |
| TAAGCAAGAGAAGTTAGAGA+AGG | 0.619925 | 5_4:+35991000 | Msa0849360:CDS |
| TCACTTGGAAGTGGTAACTG+GGG | 0.711714 | 5_4:+35989412 | Msa0849360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTTTAGATTAATGT+TGG | + | chr5_4:35990574-35990593 | Msa0849360:intron | 10.0% |
| !! | TAATTGTGAATTATATAATT+TGG | - | chr5_4:35990857-35990876 | None:intergenic | 10.0% |
| !! | TATGAAAAATAATTTAAACA+AGG | - | chr5_4:35993610-35993629 | None:intergenic | 10.0% |
| !!! | ATATTATTATTTTTAGGTAA+TGG | + | chr5_4:35998001-35998020 | Msa0849360:three_prime_UTR | 10.0% |
| !!! | AGTTTCATATACAAATTTTT+AGG | + | chr5_4:35989494-35989513 | Msa0849360:intron | 15.0% |
| !!! | TATTATTTTACTAAATCCTT+TGG | + | chr5_4:35989695-35989714 | Msa0849360:intron | 15.0% |
| !!! | TTTTGTAGACATTATTTTTT+AGG | + | chr5_4:35990433-35990452 | Msa0849360:intron | 15.0% |
| !! | TATCAATTATGTAAAATATG+TGG | + | chr5_4:35990732-35990751 | Msa0849360:intron | 15.0% |
| !! | CACATTAAAATATGTAAAAT+AGG | + | chr5_4:35990775-35990794 | Msa0849360:intron | 15.0% |
| !! | ATTAAAATATGTAAAATAGG+TGG | + | chr5_4:35990778-35990797 | Msa0849360:intron | 15.0% |
| !! | TAATTCACAATTATAAATCA+TGG | + | chr5_4:35990864-35990883 | Msa0849360:intron | 15.0% |
| !!! | AATCTAACTATTTTCAAAAT+AGG | + | chr5_4:35991290-35991309 | Msa0849360:intron | 15.0% |
| !! | TTGTTTATTAAATACTATAC+TGG | + | chr5_4:35991975-35991994 | Msa0849360:intron | 15.0% |
| !!! | TTAATGTTATTTATTTCATC+AGG | - | chr5_4:35992110-35992129 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATCAATTGAAAT+TGG | + | chr5_4:35992483-35992502 | Msa0849360:intron | 15.0% |
| !!! | TATCAATTAATCTTATCTTT+TGG | - | chr5_4:35992797-35992816 | None:intergenic | 15.0% |
| !!! | TCTATTTTATTTGATTGTTA+TGG | - | chr5_4:35993171-35993190 | None:intergenic | 15.0% |
| !! | ACAATCAAATAAAATAGAAA+AGG | + | chr5_4:35993173-35993192 | Msa0849360:intron | 15.0% |
| !! | AAAAACAAACAAATATGAAT+AGG | + | chr5_4:35993709-35993728 | Msa0849360:intron | 15.0% |
| !! | AAAACAAACAAATATGAATA+GGG | + | chr5_4:35993710-35993729 | Msa0849360:intron | 15.0% |
| !! | AAAAACAAACAAAAATGAAT+AGG | + | chr5_4:35993736-35993755 | Msa0849360:intron | 15.0% |
| !! | AAAACAAACAAAAATGAATA+GGG | + | chr5_4:35993737-35993756 | Msa0849360:intron | 15.0% |
| !! | TCTTATATAGAAAAATACTA+TGG | + | chr5_4:35994898-35994917 | Msa0849360:intron | 15.0% |
| !! | TACTTATATGAAAAAGTAAA+AGG | + | chr5_4:35995240-35995259 | Msa0849360:intron | 15.0% |
| !!! | TTATGTTAGACTTTTTTTTT+TGG | - | chr5_4:35995507-35995526 | None:intergenic | 15.0% |
| !! | AAGTTAAATACTAATCAATA+CGG | + | chr5_4:35995732-35995751 | Msa0849360:intron | 15.0% |
| !! | TTCATGTATTATATGAATAT+GGG | - | chr5_4:35995837-35995856 | None:intergenic | 15.0% |
| !! | TTTCATGTATTATATGAATA+TGG | - | chr5_4:35995838-35995857 | None:intergenic | 15.0% |
| !!! | TTTTTATGAAAAGATAAAGA+AGG | + | chr5_4:35996164-35996183 | Msa0849360:intron | 15.0% |
| !!! | ATTTTTGATGAAAATATCAA+AGG | + | chr5_4:35996220-35996239 | Msa0849360:intron | 15.0% |
| !!! | TTTTTGATGAAAATATCAAA+GGG | + | chr5_4:35996221-35996240 | Msa0849360:intron | 15.0% |
| !! | GGTTATTTGTTTATAATAAT+TGG | + | chr5_4:35996510-35996529 | Msa0849360:intron | 15.0% |
| !! | ATAATAATTGGTTGTTATAT+CGG | + | chr5_4:35996522-35996541 | Msa0849360:intron | 15.0% |
| !! | AAAATAAAAGCAAATAAGTA+AGG | - | chr5_4:35997459-35997478 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGTTTTGATGATT+TGG | + | chr5_4:35989581-35989600 | Msa0849360:intron | 20.0% |
| !!! | TTTTGTTGTTTTGATGATTT+GGG | + | chr5_4:35989582-35989601 | Msa0849360:intron | 20.0% |
| !!! | GTTTTTGTGTTTCTAATAAT+GGG | + | chr5_4:35989650-35989669 | Msa0849360:intron | 20.0% |
| !!! | AAATAATTCATTTTCAGTGT+GGG | - | chr5_4:35990239-35990258 | None:intergenic | 20.0% |
| !! | CAGCTATAAATAAATACAAA+GGG | - | chr5_4:35990545-35990564 | None:intergenic | 20.0% |
| !! | ACAGCTATAAATAAATACAA+AGG | - | chr5_4:35990546-35990565 | None:intergenic | 20.0% |
| !! | TTTACTATAGCAAATGAAAA+TGG | - | chr5_4:35990677-35990696 | None:intergenic | 20.0% |
| !! | TGGTCAATTTATTATGTAAA+TGG | + | chr5_4:35991384-35991403 | Msa0849360:intron | 20.0% |
| !! | ACAAATTTGATCTCTAAATT+CGG | - | chr5_4:35991885-35991904 | None:intergenic | 20.0% |
| !!! | AATCATTTTGATCTTTTGTA+TGG | - | chr5_4:35992079-35992098 | None:intergenic | 20.0% |
| !! | AAAATATTACTAATGAACAG+AGG | + | chr5_4:35992161-35992180 | Msa0849360:intron | 20.0% |
| !!! | TGTTAATTCACAAATCTTTT+TGG | - | chr5_4:35992292-35992311 | None:intergenic | 20.0% |
| !! | TCAATTGATAAAACAAATGA+TGG | - | chr5_4:35992480-35992499 | None:intergenic | 20.0% |
| !!! | TATTATGTTTCTAGTTAGTT+TGG | - | chr5_4:35992822-35992841 | None:intergenic | 20.0% |
| !! | TTATGTATTGCTTATTATGT+TGG | - | chr5_4:35992848-35992867 | None:intergenic | 20.0% |
| !! | AATAAGCAATACATAAACTA+AGG | + | chr5_4:35992852-35992871 | Msa0849360:intron | 20.0% |
| !! | ATAGAAAAGGACATTAAAAA+AGG | + | chr5_4:35993186-35993205 | Msa0849360:intron | 20.0% |
| !! | TTTCAGTATAATATTCATGT+TGG | + | chr5_4:35993365-35993384 | Msa0849360:intron | 20.0% |
| !! | TTCTCAACATAAAGATAATA+TGG | - | chr5_4:35993415-35993434 | None:intergenic | 20.0% |
| !! | AAATAAAATCTGAACAGAAA+AGG | + | chr5_4:35993842-35993861 | Msa0849360:intron | 20.0% |
| !! | GTTTATCAAATCACAATAAA+TGG | + | chr5_4:35994231-35994250 | Msa0849360:intron | 20.0% |
| !!! | GGTTATTTTGCTTTATATTA+TGG | - | chr5_4:35994499-35994518 | None:intergenic | 20.0% |
| !! | TAATATAAAGCAAAATAACC+AGG | + | chr5_4:35994499-35994518 | Msa0849360:intron | 20.0% |
| !! | ACATAGAAAGCAAAAAATAA+AGG | - | chr5_4:35995209-35995228 | None:intergenic | 20.0% |
| !!! | TTTCTTTTGTTCTGTTTTAA+TGG | - | chr5_4:35995414-35995433 | None:intergenic | 20.0% |
| !! | TTTATGCATTATGTGAATAT+GGG | - | chr5_4:35995797-35995816 | None:intergenic | 20.0% |
| !! | ATTTATGCATTATGTGAATA+TGG | - | chr5_4:35995798-35995817 | None:intergenic | 20.0% |
| !! | TTCAAGGAAAAATTATGAAA+AGG | + | chr5_4:35996058-35996077 | Msa0849360:intron | 20.0% |
| !! | TCAAGGAAAAATTATGAAAA+GGG | + | chr5_4:35996059-35996078 | Msa0849360:intron | 20.0% |
| !!! | TTTTGATGAAAATATCAAAG+GGG | + | chr5_4:35996222-35996241 | Msa0849360:intron | 20.0% |
| !! | AAATTGAAAAAATAAGAGAG+AGG | + | chr5_4:35996396-35996415 | Msa0849360:intron | 20.0% |
| !!! | ATTTATTTTGGTGTCTAAAT+CGG | + | chr5_4:35996560-35996579 | Msa0849360:intron | 20.0% |
| !! | AAAATACCTTAAAATCCTTT+GGG | - | chr5_4:35997298-35997317 | None:intergenic | 20.0% |
| !! | AAAAATACCTTAAAATCCTT+TGG | - | chr5_4:35997299-35997318 | None:intergenic | 20.0% |
| !!! | TAAGGTATTTTTGTGATATA+AGG | + | chr5_4:35997307-35997326 | Msa0849360:intron | 20.0% |
| !! | TAAATAGAAAATTGTTTGAG+TGG | + | chr5_4:35997369-35997388 | Msa0849360:intron | 20.0% |
| !!! | TTGCTTTTATTTTGTAGATA+TGG | + | chr5_4:35997466-35997485 | Msa0849360:intron | 20.0% |
| !! | GTTTATTGTTCTATACATAA+AGG | + | chr5_4:35997712-35997731 | Msa0849360:intron | 20.0% |
| !!! | CTGCAAAATTTAAAATATGT+GGG | - | chr5_4:35997828-35997847 | None:intergenic | 20.0% |
| ! | AACTAATGAAGTTCATTCAA+AGG | - | chr5_4:35989478-35989497 | None:intergenic | 25.0% |
| !!! | ACTTTTTGTTGATTTCTGAT+AGG | + | chr5_4:35989627-35989646 | Msa0849360:intron | 25.0% |
| !!! | CTTTTTGTTGATTTCTGATA+GGG | + | chr5_4:35989628-35989647 | Msa0849360:intron | 25.0% |
| !!! | GGTTTTTGTGTTTCTAATAA+TGG | + | chr5_4:35989649-35989668 | Msa0849360:intron | 25.0% |
| ! | AATGACAGTGAGAATATTTA+AGG | + | chr5_4:35989734-35989753 | Msa0849360:intron | 25.0% |
| !! | ATAAGGTGATTTAAAACACA+AGG | - | chr5_4:35989946-35989965 | None:intergenic | 25.0% |
| !!! | TCACCTTATGTTTTAAATCA+AGG | + | chr5_4:35989957-35989976 | Msa0849360:intron | 25.0% |
| !! | AAGCCTTGATTTAAAACATA+AGG | - | chr5_4:35989963-35989982 | None:intergenic | 25.0% |
| !!! | GGCTTTTAATATATTTTTGC+TGG | + | chr5_4:35989978-35989997 | Msa0849360:intron | 25.0% |
| !! | GAGTTTGTTTACATTAGTAA+AGG | + | chr5_4:35990127-35990146 | Msa0849360:intron | 25.0% |
| !! | CAAATAATTCATTTTCAGTG+TGG | - | chr5_4:35990240-35990259 | None:intergenic | 25.0% |
| ! | AATATAATCTTCCATGAAGT+AGG | - | chr5_4:35990409-35990428 | None:intergenic | 25.0% |
| ! | AGAATAAGAAGTGAAATTTC+AGG | - | chr5_4:35991043-35991062 | None:intergenic | 25.0% |
| !! | TACACTTGCATATTTTACAT+GGG | - | chr5_4:35991135-35991154 | None:intergenic | 25.0% |
| ! | ATTCAATTAACAAGCAAAGT+TGG | - | chr5_4:35991268-35991287 | None:intergenic | 25.0% |
| ! | AAGTTTAATACCAAAGATCA+TGG | + | chr5_4:35991411-35991430 | Msa0849360:intron | 25.0% |
| ! | ACAATTGACAATGATTACTA+TGG | + | chr5_4:35991489-35991508 | Msa0849360:intron | 25.0% |
| !!! | ATTATTTCTAGTCGCTATTT+CGG | + | chr5_4:35991927-35991946 | Msa0849360:intron | 25.0% |
| ! | ACACATCAAATTATCTATTC+AGG | + | chr5_4:35992314-35992333 | Msa0849360:intron | 25.0% |
| !!! | ATAATGAGGTTGATGATTAT+GGG | - | chr5_4:35992391-35992410 | None:intergenic | 25.0% |
| ! | AGAATTGGCAAAAACAAATA+AGG | - | chr5_4:35992519-35992538 | None:intergenic | 25.0% |
| ! | GTAAAGAAAGGACAAATATA+TGG | - | chr5_4:35992668-35992687 | None:intergenic | 25.0% |
| ! | TGATAAAAGATCTAAACATG+TGG | - | chr5_4:35992892-35992911 | None:intergenic | 25.0% |
| !! | ATTTGATTGTTATGGTGTTA+GGG | - | chr5_4:35993163-35993182 | None:intergenic | 25.0% |
| ! | TATTTGATTGTTATGGTGTT+AGG | - | chr5_4:35993164-35993183 | None:intergenic | 25.0% |
| ! | ACACTTCAATAATTGCATTA+TGG | - | chr5_4:35993346-35993365 | None:intergenic | 25.0% |
| ! | GTTGGAATAAAGTAAAAGAA+AGG | + | chr5_4:35993383-35993402 | Msa0849360:intron | 25.0% |
| ! | ATTATCTTTATGTTGAGAAG+CGG | + | chr5_4:35993416-35993435 | Msa0849360:intron | 25.0% |
| ! | GTCAAGCATTTATAAAAAAG+AGG | - | chr5_4:35993515-35993534 | None:intergenic | 25.0% |
| ! | AAAAATGAATAGGGAGAAAT+AGG | + | chr5_4:35993746-35993765 | Msa0849360:intron | 25.0% |
| ! | ATAAAATCTGAACAGTGAAT+AGG | + | chr5_4:35993790-35993809 | Msa0849360:intron | 25.0% |
| ! | TAAAATCTGAACAGTGAATA+GGG | + | chr5_4:35993791-35993810 | Msa0849360:intron | 25.0% |
| ! | GAATAAAACATACCTTAAAC+AGG | + | chr5_4:35993864-35993883 | Msa0849360:intron | 25.0% |
| ! | TTAAACTTGGTTATTGGTAT+TGG | - | chr5_4:35993927-35993946 | None:intergenic | 25.0% |
| ! | ATGTATAATAGATTAATGCC+TGG | - | chr5_4:35994120-35994139 | None:intergenic | 25.0% |
| ! | CTTCATTATATCACAGAATA+TGG | - | chr5_4:35994166-35994185 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTTTCTGTGTTC+AGG | - | chr5_4:35994614-35994633 | None:intergenic | 25.0% |
| ! | ACAGAAAATATAGATTGCAT+GGG | - | chr5_4:35994671-35994690 | None:intergenic | 25.0% |
| !! | CTAACAATGTTTTCATGAAA+TGG | - | chr5_4:35994719-35994738 | None:intergenic | 25.0% |
| ! | ACATGTTTAGTGATAAAGTT+CGG | + | chr5_4:35994809-35994828 | Msa0849360:intron | 25.0% |
| !! | TATAATGCAAAGTGTTACAT+GGG | - | chr5_4:35994941-35994960 | None:intergenic | 25.0% |
| !! | ATATAATGCAAAGTGTTACA+TGG | - | chr5_4:35994942-35994961 | None:intergenic | 25.0% |
| ! | TAATCTACACACATTATATC+TGG | + | chr5_4:35995011-35995030 | Msa0849360:intron | 25.0% |
| !! | TATTTCTGCTTGGAAAATAA+AGG | + | chr5_4:35995127-35995146 | Msa0849360:intron | 25.0% |
| ! | ACTGCTAATGATATATGATT+AGG | - | chr5_4:35995174-35995193 | None:intergenic | 25.0% |
| ! | TCTTTGAACTAATTAAGCAA+TGG | + | chr5_4:35995305-35995324 | Msa0849360:intron | 25.0% |
| !!! | TTTGTTCTGTTTTAATGGAA+TGG | - | chr5_4:35995409-35995428 | None:intergenic | 25.0% |
| ! | TATATGTCATATATGGCTTT+GGG | - | chr5_4:35995441-35995460 | None:intergenic | 25.0% |
| !! | TCTTTTGTTCTATATCAAGT+GGG | - | chr5_4:35995471-35995490 | None:intergenic | 25.0% |
| !! | TTCTTTTGTTCTATATCAAG+TGG | - | chr5_4:35995472-35995491 | None:intergenic | 25.0% |
| !!! | AGACTTTTTTTTTTGGCTTT+GGG | - | chr5_4:35995500-35995519 | None:intergenic | 25.0% |
| !!! | TAGACTTTTTTTTTTGGCTT+TGG | - | chr5_4:35995501-35995520 | None:intergenic | 25.0% |
| !!! | GAATATGGGTCATTTTATAT+TGG | - | chr5_4:35995823-35995842 | None:intergenic | 25.0% |
| !!! | GGTTATTGATTTTGATTTCA+AGG | + | chr5_4:35996042-35996061 | Msa0849360:intron | 25.0% |
| ! | CAAGGAAAAATTATGAAAAG+GGG | + | chr5_4:35996060-35996079 | Msa0849360:intron | 25.0% |
| !! | GTAATTTCTTGTTGTGTTTA+GGG | + | chr5_4:35996082-35996101 | Msa0849360:intron | 25.0% |
| ! | TTTGATGAAAATATCAAAGG+GGG | + | chr5_4:35996223-35996242 | Msa0849360:intron | 25.0% |
| ! | TTTAGAGACTAATAATTCAG+TGG | + | chr5_4:35996344-35996363 | Msa0849360:intron | 25.0% |
| ! | AAAATAAGAGAGAGGATATA+TGG | + | chr5_4:35996404-35996423 | Msa0849360:intron | 25.0% |
| !!! | TATTTTGGTTGTTGAACAAT+CGG | + | chr5_4:35996430-35996449 | Msa0849360:intron | 25.0% |
| ! | ACAAATAACCAAAACAAAGA+TGG | - | chr5_4:35996500-35996519 | None:intergenic | 25.0% |
| !! | CTGTTGTGACTAATTTATTT+TGG | + | chr5_4:35996548-35996567 | Msa0849360:intron | 25.0% |
| !! | CTTGTTGTGCAAATTTAAAT+GGG | - | chr5_4:35996761-35996780 | None:intergenic | 25.0% |
| ! | ATTGCAAATGAAAATCTTGA+AGG | + | chr5_4:35996931-35996950 | Msa0849360:intron | 25.0% |
| !!! | TTTTTTACGCATTTAGATTC+AGG | + | chr5_4:35997152-35997171 | Msa0849360:intron | 25.0% |
| !!! | GGTGTTTAAAATTTTTGATC+TGG | + | chr5_4:35997328-35997347 | Msa0849360:intron | 25.0% |
| ! | AAAGCAAATAAGTAAGGAAA+TGG | - | chr5_4:35997453-35997472 | None:intergenic | 25.0% |
| ! | AAAGTTGGAAATGATAACTT+GGG | - | chr5_4:35997512-35997531 | None:intergenic | 25.0% |
| ! | TAAAGTTGGAAATGATAACT+TGG | - | chr5_4:35997513-35997532 | None:intergenic | 25.0% |
| !! | TGTTTTCAATAATTATGCCA+AGG | - | chr5_4:35997786-35997805 | None:intergenic | 25.0% |
| !! | CCTGCAAAATTTAAAATATG+TGG | - | chr5_4:35997829-35997848 | None:intergenic | 25.0% |
| !!! | CCACATATTTTAAATTTTGC+AGG | + | chr5_4:35997826-35997845 | Msa0849360:intron | 25.0% |
| ! | GAATAATGTCTAAGCTAAAT+AGG | - | chr5_4:35997865-35997884 | None:intergenic | 25.0% |
| !! | GAGAATGATAATGTAAATGA+AGG | + | chr5_4:35997927-35997946 | Msa0849360:three_prime_UTR | 25.0% |
| !! | AATGATAATGTAAATGAAGG+AGG | + | chr5_4:35997930-35997949 | Msa0849360:three_prime_UTR | 25.0% |
| !! | ATGATAATGTAAATGAAGGA+GGG | + | chr5_4:35997931-35997950 | Msa0849360:three_prime_UTR | 25.0% |
| ! | GTAACAACAATTTAGAGATT+TGG | + | chr5_4:35997958-35997977 | Msa0849360:three_prime_UTR | 25.0% |
| CTTCTTCAAAAATTGTCACT+TGG | + | chr5_4:35989397-35989416 | Msa0849360:CDS | 30.0% | |
| !!! | TCCCTTTTGATTCTTGTTTT+TGG | + | chr5_4:35989520-35989539 | Msa0849360:intron | 30.0% |
| CCCAAAAACAAGAATCAAAA+GGG | - | chr5_4:35989524-35989543 | None:intergenic | 30.0% | |
| !!! | CCCTTTTGATTCTTGTTTTT+GGG | + | chr5_4:35989521-35989540 | Msa0849360:intron | 30.0% |
| ACCCAAAAACAAGAATCAAA+AGG | - | chr5_4:35989525-35989544 | None:intergenic | 30.0% | |
| GTGACATAAAAATCAACCAA+AGG | - | chr5_4:35989714-35989733 | None:intergenic | 30.0% | |
| !! | TAGTCCTTGTTGTTATCATT+AGG | + | chr5_4:35989873-35989892 | Msa0849360:intron | 30.0% |
| ATCACCTAATGATAACAACA+AGG | - | chr5_4:35989880-35989899 | None:intergenic | 30.0% | |
| !!! | TGCTTTACCTGTTTTTTTAC+AGG | + | chr5_4:35989902-35989921 | Msa0849360:intron | 30.0% |
| ATACACTCCTGTAAAAAAAC+AGG | - | chr5_4:35989912-35989931 | None:intergenic | 30.0% | |
| !!! | AACACTAGCCATTTTTGTTT+TGG | - | chr5_4:35990005-35990024 | None:intergenic | 30.0% |
| ! | TCATTTGAGACTATTATGCA+AGG | + | chr5_4:35990031-35990050 | Msa0849360:intron | 30.0% |
| ACTTTGATCAAAGACGTATT+CGG | - | chr5_4:35990286-35990305 | None:intergenic | 30.0% | |
| !! | TTTTTAGGAAACCAAACACA+TGG | + | chr5_4:35990448-35990467 | Msa0849360:CDS | 30.0% |
| !! | TGAATTAGTTTGTTCCAGTT+GGG | + | chr5_4:35990635-35990654 | Msa0849360:intron | 30.0% |
| ! | ATTAGACACAAATAGCTTGT+TGG | - | chr5_4:35990821-35990840 | None:intergenic | 30.0% |
| ! | CTACACTTGCATATTTTACA+TGG | - | chr5_4:35991136-35991155 | None:intergenic | 30.0% |
| ! | AATTAACAAGCAAAGTTGGT+AGG | - | chr5_4:35991264-35991283 | None:intergenic | 30.0% |
| !!! | CATCTGTTGACTTTTTTCTT+GGG | - | chr5_4:35991366-35991385 | None:intergenic | 30.0% |
| AATACCAAAGATCATGGTAA+TGG | + | chr5_4:35991417-35991436 | Msa0849360:intron | 30.0% | |
| ATACCAAAGATCATGGTAAT+GGG | + | chr5_4:35991418-35991437 | Msa0849360:intron | 30.0% | |
| ! | TGTTTTCTTGTAGTGAATGT+CGG | - | chr5_4:35991523-35991542 | None:intergenic | 30.0% |
| !!! | GTTTTAGCCACTCTTATTTT+TGG | - | chr5_4:35991622-35991641 | None:intergenic | 30.0% |
| !! | CAAGAAAAGAGTGTCTAAAT+CGG | - | chr5_4:35991803-35991822 | None:intergenic | 30.0% |
| AATTTGATCTCTAAATTCGG+TGG | - | chr5_4:35991882-35991901 | None:intergenic | 30.0% | |
| TTTATGTATGTAGCATTGCA+TGG | - | chr5_4:35992133-35992152 | None:intergenic | 30.0% | |
| TAAAACTACCAAGTGCATAT+AGG | - | chr5_4:35992208-35992227 | None:intergenic | 30.0% | |
| !! | TAATGAGGTTGATGATTATG+GGG | - | chr5_4:35992390-35992409 | None:intergenic | 30.0% |
| !! | GATAATGAGGTTGATGATTA+TGG | - | chr5_4:35992392-35992411 | None:intergenic | 30.0% |
| ! | CAATTGAAATTGGTGTTCAA+CGG | + | chr5_4:35992493-35992512 | Msa0849360:intron | 30.0% |
| ! | ACAAATATATGGTCTTGGAA+TGG | - | chr5_4:35992657-35992676 | None:intergenic | 30.0% |
| AAAGGACAAATATATGGTCT+TGG | - | chr5_4:35992662-35992681 | None:intergenic | 30.0% | |
| GCATAAAAAAGATAAGACGT+GGG | - | chr5_4:35992916-35992935 | None:intergenic | 30.0% | |
| AGCATAAAAAAGATAAGACG+TGG | - | chr5_4:35992917-35992936 | None:intergenic | 30.0% | |
| !!! | ACGTCTTATCTTTTTTATGC+TGG | + | chr5_4:35992916-35992935 | Msa0849360:intron | 30.0% |
| ! | TTTTCGTAGACAAAAAGTAG+CGG | - | chr5_4:35992981-35993000 | None:intergenic | 30.0% |
| ATCAGCTACTGCATTAAAAA+AGG | + | chr5_4:35993096-35993115 | Msa0849360:intron | 30.0% | |
| ! | TTTGATTGTTATGGTGTTAG+GGG | - | chr5_4:35993162-35993181 | None:intergenic | 30.0% |
| !!! | TGCATTATGGTCTTTTTTCA+AGG | - | chr5_4:35993333-35993352 | None:intergenic | 30.0% |
| GCCTAACTTATGTAATCATT+GGG | - | chr5_4:35993541-35993560 | None:intergenic | 30.0% | |
| !! | AGAAAGAACTTTGAAATGAG+AGG | - | chr5_4:35993642-35993661 | None:intergenic | 30.0% |
| ATAGTTCATCTTCACAAGAA+GGG | - | chr5_4:35993952-35993971 | None:intergenic | 30.0% | |
| TATAGTTCATCTTCACAAGA+AGG | - | chr5_4:35993953-35993972 | None:intergenic | 30.0% | |
| AGATGAACTATAACTTCATC+TGG | + | chr5_4:35993961-35993980 | Msa0849360:intron | 30.0% | |
| ! | AGATTTTTGCATGTAGAACA+AGG | + | chr5_4:35993997-35994016 | Msa0849360:intron | 30.0% |
| GCACTTCAAATGGAAATATT+AGG | - | chr5_4:35994026-35994045 | None:intergenic | 30.0% | |
| AGATTATACTCGTGAATTTG+AGG | - | chr5_4:35994091-35994110 | None:intergenic | 30.0% | |
| ATAATAGATTAATGCCTGGA+TGG | - | chr5_4:35994116-35994135 | None:intergenic | 30.0% | |
| ! | GTATCATGTTTCTTTTGTTC+TGG | + | chr5_4:35994302-35994321 | Msa0849360:intron | 30.0% |
| !!! | ATTTTAACTTATGAGACTCC+TGG | - | chr5_4:35994520-35994539 | None:intergenic | 30.0% |
| CTTGTTCTTCAACTATTATG+TGG | - | chr5_4:35994548-35994567 | None:intergenic | 30.0% | |
| ! | AGGGAAACTTTATTTGTGAA+AGG | - | chr5_4:35994578-35994597 | None:intergenic | 30.0% |
| GACAGAAAATATAGATTGCA+TGG | - | chr5_4:35994672-35994691 | None:intergenic | 30.0% | |
| ATGACTCATAAGCAGTTTAA+GGG | - | chr5_4:35994992-35995011 | None:intergenic | 30.0% | |
| TATGACTCATAAGCAGTTTA+AGG | - | chr5_4:35994993-35995012 | None:intergenic | 30.0% | |
| TCCAAGCAGAAATATTAACA+AGG | - | chr5_4:35995121-35995140 | None:intergenic | 30.0% | |
| ATGTCTCAACATTCAACTAT+AGG | + | chr5_4:35995344-35995363 | Msa0849360:intron | 30.0% | |
| GTATATGTCATATATGGCTT+TGG | - | chr5_4:35995442-35995461 | None:intergenic | 30.0% | |
| ! | TTTTGTTCTATATCAAGTGG+GGG | - | chr5_4:35995469-35995488 | None:intergenic | 30.0% |
| ! | CTTTTGTTCTATATCAAGTG+GGG | - | chr5_4:35995470-35995489 | None:intergenic | 30.0% |
| !! | TTGTTAAGCTTTGTTCTGTT+AGG | - | chr5_4:35995571-35995590 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTGGCTTAGTGTT+AGG | - | chr5_4:35995597-35995616 | None:intergenic | 30.0% |
| AACACTAAGCCACAAAAAAA+AGG | + | chr5_4:35995597-35995616 | Msa0849360:intron | 30.0% | |
| !! | CTTTTGATGCCTTTTTTTTG+TGG | - | chr5_4:35995609-35995628 | None:intergenic | 30.0% |
| ATACATGAAAAACAGAGAAG+AGG | + | chr5_4:35995848-35995867 | Msa0849360:intron | 30.0% | |
| AGAACAAGAAATGGAAAAAC+AGG | + | chr5_4:35995969-35995988 | Msa0849360:intron | 30.0% | |
| ! | GGTAATTTCTTGTTGTGTTT+AGG | + | chr5_4:35996081-35996100 | Msa0849360:intron | 30.0% |
| !! | TGTTTAGGGTTATGTTCTTT+TGG | + | chr5_4:35996096-35996115 | Msa0849360:intron | 30.0% |
| TGAAAAGAGAAAGATGAAAG+AGG | + | chr5_4:35996125-35996144 | Msa0849360:intron | 30.0% | |
| GAAAAGAGAAAGATGAAAGA+GGG | + | chr5_4:35996126-35996145 | Msa0849360:intron | 30.0% | |
| AGAAGGATAATTCATTCAAG+AGG | + | chr5_4:35996181-35996200 | Msa0849360:intron | 30.0% | |
| GAAGGATAATTCATTCAAGA+GGG | + | chr5_4:35996182-35996201 | Msa0849360:intron | 30.0% | |
| AAGTACAACATTATTTGAGC+GGG | - | chr5_4:35996264-35996283 | None:intergenic | 30.0% | |
| GAAGTACAACATTATTTGAG+CGG | - | chr5_4:35996265-35996284 | None:intergenic | 30.0% | |
| ! | GAGGATATATGGTGATATTT+TGG | + | chr5_4:35996415-35996434 | Msa0849360:intron | 30.0% |
| AACAAAGATGGTCTCTAAAT+CGG | - | chr5_4:35996488-35996507 | None:intergenic | 30.0% | |
| !! | TTTAGAGACCATCTTTGTTT+TGG | + | chr5_4:35996489-35996508 | Msa0849360:intron | 30.0% |
| !! | ATTGTTGAAGTTTGCTATAC+TGG | + | chr5_4:35996610-35996629 | Msa0849360:intron | 30.0% |
| ! | AACAGAACCAACGTTTTTAT+TGG | - | chr5_4:35996640-35996659 | None:intergenic | 30.0% |
| TTTGATCCTACTTTGATCAA+GGG | + | chr5_4:35996673-35996692 | Msa0849360:intron | 30.0% | |
| !! | GCTTGTTGTGCAAATTTAAA+TGG | - | chr5_4:35996762-35996781 | None:intergenic | 30.0% |
| TGATTTAGTTGGAGAAATTG+AGG | + | chr5_4:35996963-35996982 | Msa0849360:intron | 30.0% | |
| ATGGGATAAAGATATTGATG+AGG | + | chr5_4:35997023-35997042 | Msa0849360:intron | 30.0% | |
| TGATGAAACATATTCTGACT+AGG | + | chr5_4:35997083-35997102 | Msa0849360:intron | 30.0% | |
| !! | AAAATCCTTTGGGTTAGTTT+GGG | - | chr5_4:35997288-35997307 | None:intergenic | 30.0% |
| !! | TAAAATCCTTTGGGTTAGTT+TGG | - | chr5_4:35997289-35997308 | None:intergenic | 30.0% |
| ! | AACTAACCCAAAGGATTTTA+AGG | + | chr5_4:35997289-35997308 | Msa0849360:intron | 30.0% |
| ATTGTTTGAGTGGTGATATT+AGG | + | chr5_4:35997379-35997398 | Msa0849360:intron | 30.0% | |
| TGATATTAGGTGAATTGTTG+TGG | + | chr5_4:35997392-35997411 | Msa0849360:intron | 30.0% | |
| AAGTAAGGAAATGGTAACTT+GGG | - | chr5_4:35997444-35997463 | None:intergenic | 30.0% | |
| TAAGTAAGGAAATGGTAACT+TGG | - | chr5_4:35997445-35997464 | None:intergenic | 30.0% | |
| TCATTAACTAGTGAAACCTT+TGG | - | chr5_4:35997557-35997576 | None:intergenic | 30.0% | |
| AAGGTTTCACTAGTTAATGA+CGG | + | chr5_4:35997557-35997576 | Msa0849360:CDS | 30.0% | |
| GATGAATATACAAGAGATAG+CGG | + | chr5_4:35997583-35997602 | Msa0849360:CDS | 30.0% | |
| !! | AGAAAATTTGTTGACTAGCT+TGG | + | chr5_4:35997743-35997762 | Msa0849360:intron | 30.0% |
| ! | TTTTAAATTTTGCAGGCTGA+TGG | + | chr5_4:35997833-35997852 | Msa0849360:intron | 30.0% |
| TGAGCTAATTAACAAAGCTT+CGG | - | chr5_4:35997887-35997906 | None:intergenic | 30.0% | |
| ! | TGATAATGTAAATGAAGGAG+GGG | + | chr5_4:35997932-35997951 | Msa0849360:three_prime_UTR | 30.0% |
| ! | TCATTTGGAAGTTAGGGTTT+TGG | + | chr5_4:35989369-35989388 | Msa0849360:CDS | 35.0% |
| ! | CATTTGGAAGTTAGGGTTTT+GGG | + | chr5_4:35989370-35989389 | Msa0849360:CDS | 35.0% |
| ! | CAAAAATTGTCACTTGGAAG+TGG | + | chr5_4:35989403-35989422 | Msa0849360:CDS | 35.0% |
| ACAAGGACTAAATCAAAACC+AGG | - | chr5_4:35989863-35989882 | None:intergenic | 35.0% | |
| TTGCTGGTCCAAAACAAAAA+TGG | + | chr5_4:35989994-35990013 | Msa0849360:intron | 35.0% | |
| GCCTATATTTGTCACTGTTA+TGG | + | chr5_4:35990071-35990090 | Msa0849360:intron | 35.0% | |
| GCCATAACAGTGACAAATAT+AGG | - | chr5_4:35990075-35990094 | None:intergenic | 35.0% | |
| ATATTTGTCACTGTTATGGC+AGG | + | chr5_4:35990075-35990094 | Msa0849360:intron | 35.0% | |
| TAGAAATCAGTCCTACTTCA+TGG | + | chr5_4:35990395-35990414 | Msa0849360:intron | 35.0% | |
| !! | CTGAATTAGTTTGTTCCAGT+TGG | + | chr5_4:35990634-35990653 | Msa0849360:intron | 35.0% |
| !! | GAATTAGTTTGTTCCAGTTG+GGG | + | chr5_4:35990636-35990655 | Msa0849360:intron | 35.0% |
| !! | AATTAGTTTGTTCCAGTTGG+GGG | + | chr5_4:35990637-35990656 | Msa0849360:intron | 35.0% |
| GAGTTTGTCTACATCAGTAA+AGG | + | chr5_4:35990920-35990939 | Msa0849360:intron | 35.0% | |
| TAAGCAAGAGAAGTTAGAGA+AGG | + | chr5_4:35991000-35991019 | Msa0849360:CDS | 35.0% | |
| TCTCCACTTCATTTCCTAAT+TGG | + | chr5_4:35991193-35991212 | Msa0849360:CDS | 35.0% | |
| GAACCAATTAGGAAATGAAG+TGG | - | chr5_4:35991199-35991218 | None:intergenic | 35.0% | |
| ACATATTCGCTGAACCAATT+AGG | - | chr5_4:35991210-35991229 | None:intergenic | 35.0% | |
| ! | ATTGGTTCAGCGAATATGTA+TGG | + | chr5_4:35991211-35991230 | Msa0849360:CDS | 35.0% |
| TTGGTAGGATAATGACACTA+GGG | - | chr5_4:35991249-35991268 | None:intergenic | 35.0% | |
| !!! | CCATCTGTTGACTTTTTTCT+TGG | - | chr5_4:35991367-35991386 | None:intergenic | 35.0% |
| CCAAGAAAAAAGTCAACAGA+TGG | + | chr5_4:35991364-35991383 | Msa0849360:intron | 35.0% | |
| CTGAATATTCGGTCTCTAAA+AGG | - | chr5_4:35991547-35991566 | None:intergenic | 35.0% | |
| TGATGTAGCGACTGAATATT+CGG | - | chr5_4:35991558-35991577 | None:intergenic | 35.0% | |
| AGTCGCTACATCAACAAAAT+CGG | + | chr5_4:35991565-35991584 | Msa0849360:intron | 35.0% | |
| ATAGCGACCAAAAATAAGAG+TGG | + | chr5_4:35991612-35991631 | Msa0849360:intron | 35.0% | |
| ! | TTTTGTCACTGAATTCTGAG+TGG | + | chr5_4:35991719-35991738 | Msa0849360:intron | 35.0% |
| ! | CGATTTAGACACTCTTTTCT+TGG | + | chr5_4:35991801-35991820 | Msa0849360:intron | 35.0% |
| AACCAAAAGAAAGTTGCAAG+TGG | + | chr5_4:35992245-35992264 | Msa0849360:intron | 35.0% | |
| ! | TACCACTTGCAACTTTCTTT+TGG | - | chr5_4:35992250-35992269 | None:intergenic | 35.0% |
| AAAAGAAAGTTGCAAGTGGT+AGG | + | chr5_4:35992249-35992268 | Msa0849360:intron | 35.0% | |
| CAACCTCATTATCATTAGCA+TGG | + | chr5_4:35992399-35992418 | Msa0849360:intron | 35.0% | |
| ! | TTGCCAATTCTTTTCGAAGT+TGG | + | chr5_4:35992528-35992547 | Msa0849360:intron | 35.0% |
| AGACCAACTTCGAAAAGAAT+TGG | - | chr5_4:35992534-35992553 | None:intergenic | 35.0% | |
| GAGAGAATTTACATGCAAGT+GGG | - | chr5_4:35992768-35992787 | None:intergenic | 35.0% | |
| AGAGAGAATTTACATGCAAG+TGG | - | chr5_4:35992769-35992788 | None:intergenic | 35.0% | |
| ACAGTCAAACACATCAACAA+AGG | + | chr5_4:35993071-35993090 | Msa0849360:intron | 35.0% | |
| TCTGATTGTTATGTTGTGAG+GGG | - | chr5_4:35993285-35993304 | None:intergenic | 35.0% | |
| GTCTGATTGTTATGTTGTGA+GGG | - | chr5_4:35993286-35993305 | None:intergenic | 35.0% | |
| TGTCTGATTGTTATGTTGTG+AGG | - | chr5_4:35993287-35993306 | None:intergenic | 35.0% | |
| GCCCAATGATTACATAAGTT+AGG | + | chr5_4:35993537-35993556 | Msa0849360:intron | 35.0% | |
| GGCCTAACTTATGTAATCAT+TGG | - | chr5_4:35993542-35993561 | None:intergenic | 35.0% | |
| GCTGGATTAATGAGGATATT+TGG | - | chr5_4:35993563-35993582 | None:intergenic | 35.0% | |
| ATATCCTCATTAATCCAGCT+CGG | + | chr5_4:35993564-35993583 | Msa0849360:intron | 35.0% | |
| AACAGTGAATAGGGAGAAAT+AGG | + | chr5_4:35993800-35993819 | Msa0849360:intron | 35.0% | |
| ACCTTAAACAGGTTTAAACC+AGG | + | chr5_4:35993875-35993894 | Msa0849360:intron | 35.0% | |
| ACCTGGTTTAAACCTGTTTA+AGG | - | chr5_4:35993879-35993898 | None:intergenic | 35.0% | |
| AAACAGGTTTAAACCAGGTT+TGG | + | chr5_4:35993880-35993899 | Msa0849360:intron | 35.0% | |
| ! | TATTGGTATTGGACTTGTCA+TGG | - | chr5_4:35993916-35993935 | None:intergenic | 35.0% |
| AGGGGTTTAAACTTGGTTAT+TGG | - | chr5_4:35993933-35993952 | None:intergenic | 35.0% | |
| TAGTTCATCTTCACAAGAAG+GGG | - | chr5_4:35993951-35993970 | None:intergenic | 35.0% | |
| ! | ATATTTCCATTTGAAGTGCC+TGG | + | chr5_4:35994027-35994046 | Msa0849360:intron | 35.0% |
| ! | ATACTCGTGAATTTGAGGTA+GGG | - | chr5_4:35994086-35994105 | None:intergenic | 35.0% |
| ! | TATACTCGTGAATTTGAGGT+AGG | - | chr5_4:35994087-35994106 | None:intergenic | 35.0% |
| ATATTCGTGTAAGTCGTAGT+TGG | - | chr5_4:35994143-35994162 | None:intergenic | 35.0% | |
| !! | TACTTCAGTGTTGACAACAT+CGG | + | chr5_4:35994349-35994368 | Msa0849360:intron | 35.0% |
| TTGTGTACTAAAAAGCAGAC+AGG | + | chr5_4:35994452-35994471 | Msa0849360:intron | 35.0% | |
| TGTGTACTAAAAAGCAGACA+GGG | + | chr5_4:35994453-35994472 | Msa0849360:intron | 35.0% | |
| TTCAGGAACAACTAAGGAAA+GGG | - | chr5_4:35994597-35994616 | None:intergenic | 35.0% | |
| GTCAGAGATATAAACACACT+TGG | - | chr5_4:35994835-35994854 | None:intergenic | 35.0% | |
| !!! | ACATGGGTTTTGTTGTAATC+TGG | - | chr5_4:35994925-35994944 | None:intergenic | 35.0% |
| TGACTCATAAGCAGTTTAAG+GGG | - | chr5_4:35994991-35995010 | None:intergenic | 35.0% | |
| ! | TGTGATTGATTTACACATGC+CGG | + | chr5_4:35995076-35995095 | Msa0849360:intron | 35.0% |
| CATGTTTCACTGAAATCATC+CGG | - | chr5_4:35995098-35995117 | None:intergenic | 35.0% | |
| ! | GCCTTGTTAATATTTCTGCT+TGG | + | chr5_4:35995117-35995136 | Msa0849360:intron | 35.0% |
| !!! | GTTCTGTTTTAATGGAATGG+TGG | - | chr5_4:35995406-35995425 | None:intergenic | 35.0% |
| GGTGGTGTATATGTCATATA+TGG | - | chr5_4:35995448-35995467 | None:intergenic | 35.0% | |
| TTTGTGACTTCTACAAAGCT+TGG | - | chr5_4:35995648-35995667 | None:intergenic | 35.0% | |
| AATACAGCGAGAACAAGAAA+TGG | + | chr5_4:35995960-35995979 | Msa0849360:intron | 35.0% | |
| !! | GATGATGGGTTTCAATTTCA+TGG | + | chr5_4:35996021-35996040 | Msa0849360:intron | 35.0% |
| !! | TTGAAGTTTGCTATACTGGA+TGG | + | chr5_4:35996614-35996633 | Msa0849360:intron | 35.0% |
| ! | TGGTTCTGTTCAAATGTGAT+TGG | + | chr5_4:35996650-35996669 | Msa0849360:intron | 35.0% |
| GTTTGATCCTACTTTGATCA+AGG | + | chr5_4:35996672-35996691 | Msa0849360:intron | 35.0% | |
| ! | CTTTTTCCCTTGATCAAAGT+AGG | - | chr5_4:35996682-35996701 | None:intergenic | 35.0% |
| GGGAAAAAGATAGATAGCTA+TGG | + | chr5_4:35996693-35996712 | Msa0849360:intron | 35.0% | |
| ! | ACCAATCATTTTGTCCTTCA+GGG | - | chr5_4:35996809-35996828 | None:intergenic | 35.0% |
| ! | AACCAATCATTTTGTCCTTC+AGG | - | chr5_4:35996810-35996829 | None:intergenic | 35.0% |
| TGAAGGACAAAATGATTGGT+TGG | + | chr5_4:35996809-35996828 | Msa0849360:intron | 35.0% | |
| TTGGTATGGAATATCTCTCT+CGG | - | chr5_4:35996889-35996908 | None:intergenic | 35.0% | |
| !! | GGAAGTCTTGTTGATTTAGT+TGG | + | chr5_4:35996952-35996971 | Msa0849360:intron | 35.0% |
| AAGCTAAGCTCATTCAAGAA+TGG | - | chr5_4:35997000-35997019 | None:intergenic | 35.0% | |
| !! | TGAATGAGCTTAGCTTTGAA+TGG | + | chr5_4:35997004-35997023 | Msa0849360:intron | 35.0% |
| !! | GAATGAGCTTAGCTTTGAAT+GGG | + | chr5_4:35997005-35997024 | Msa0849360:intron | 35.0% |
| TGTTCACAGATGTCAAATAG+AGG | + | chr5_4:35997208-35997227 | Msa0849360:intron | 35.0% | |
| TAGGTGAATTGTTGTGGATA+TGG | + | chr5_4:35997398-35997417 | Msa0849360:intron | 35.0% | |
| TTAGAGGTAGCAGATAAAGT+TGG | - | chr5_4:35997527-35997546 | None:intergenic | 35.0% | |
| AACTTTATCTGCTACCTCTA+AGG | + | chr5_4:35997526-35997545 | Msa0849360:CDS | 35.0% | |
| ACTTTATCTGCTACCTCTAA+GGG | + | chr5_4:35997527-35997546 | Msa0849360:CDS | 35.0% | |
| TTACATGTGTAGCAATAGCA+TGG | - | chr5_4:35997655-35997674 | None:intergenic | 35.0% | |
| !! | TTGACATTGCTTTGTTTCCT+TGG | + | chr5_4:35997766-35997785 | Msa0849360:intron | 35.0% |
| TTCTGCTATCTGCATTTAGC+CGG | + | chr5_4:35989785-35989804 | Msa0849360:intron | 40.0% | |
| !! | TTCGTGGTGTTTTTGTGCTT+AGG | + | chr5_4:35989837-35989856 | Msa0849360:intron | 40.0% |
| ACCTGAGACACATTACAAAC+CGG | - | chr5_4:35990163-35990182 | None:intergenic | 40.0% | |
| TAGGAAACCAAACACATGGA+AGG | + | chr5_4:35990452-35990471 | Msa0849360:CDS | 40.0% | |
| AGGAAACCAAACACATGGAA+GGG | + | chr5_4:35990453-35990472 | Msa0849360:CDS | 40.0% | |
| ATGCAAGTGTAGAAAGTCTC+AGG | + | chr5_4:35991144-35991163 | Msa0849360:intron | 40.0% | |
| TGTAGAAAGTCTCAGGTAGT+TGG | + | chr5_4:35991151-35991170 | Msa0849360:intron | 40.0% | |
| ! | GTTGGTAGGATAATGACACT+AGG | - | chr5_4:35991250-35991269 | None:intergenic | 40.0% |
| TCAAAAAGTCATCCTCAGCA+TGG | - | chr5_4:35991326-35991345 | None:intergenic | 40.0% | |
| ! | ATGCTGAGGATGACTTTTTG+AGG | + | chr5_4:35991325-35991344 | Msa0849360:intron | 40.0% |
| !! | GGATGACTTTTTGAGGAGTT+TGG | + | chr5_4:35991332-35991351 | Msa0849360:intron | 40.0% |
| !! | ACTTTTTGAGGAGTTTGGCA+TGG | + | chr5_4:35991337-35991356 | Msa0849360:intron | 40.0% |
| !! | CTTTTTGAGGAGTTTGGCAT+GGG | + | chr5_4:35991338-35991357 | Msa0849360:intron | 40.0% |
| !! | TTTTTGAGGAGTTTGGCATG+GGG | + | chr5_4:35991339-35991358 | Msa0849360:intron | 40.0% |
| CATCCCATTACCATGATCTT+TGG | - | chr5_4:35991424-35991443 | None:intergenic | 40.0% | |
| AATTGTGGCGTATCTGTTCA+AGG | + | chr5_4:35991453-35991472 | Msa0849360:intron | 40.0% | |
| AATAAGAGTGGCTAAAACGC+TGG | + | chr5_4:35991624-35991643 | Msa0849360:intron | 40.0% | |
| ! | GACCGATATAGAGACGTTTT+TGG | + | chr5_4:35991749-35991768 | Msa0849360:intron | 40.0% |
| CGCCAAAAACGTCTCTATAT+CGG | - | chr5_4:35991754-35991773 | None:intergenic | 40.0% | |
| TTTGGCGATTGATCTAGAGA+CGG | + | chr5_4:35991767-35991786 | Msa0849360:intron | 40.0% | |
| CACAAAAGCCTATATGCACT+TGG | + | chr5_4:35992197-35992216 | Msa0849360:intron | 40.0% | |
| !! | AGTTGATGACGAGTTAGAGT+TGG | - | chr5_4:35992354-35992373 | None:intergenic | 40.0% |
| ! | CGACCATGCTAATGATAATG+AGG | - | chr5_4:35992405-35992424 | None:intergenic | 40.0% |
| ATGGAATCTTCTGTACTAGC+AGG | - | chr5_4:35992638-35992657 | None:intergenic | 40.0% | |
| GATGTTGCAGGAGTAAAGAA+AGG | - | chr5_4:35992680-35992699 | None:intergenic | 40.0% | |
| CGAAACAATGCCACATTAGA+AGG | + | chr5_4:35992948-35992967 | Msa0849360:intron | 40.0% | |
| AACAATGCCACATTAGAAGG+TGG | + | chr5_4:35992951-35992970 | Msa0849360:intron | 40.0% | |
| ACAATGCCACATTAGAAGGT+GGG | + | chr5_4:35992952-35992971 | Msa0849360:intron | 40.0% | |
| TATGACTGTTATGTTGCGAG+GGG | - | chr5_4:35993232-35993251 | None:intergenic | 40.0% | |
| GTATGACTGTTATGTTGCGA+GGG | - | chr5_4:35993233-35993252 | None:intergenic | 40.0% | |
| TGTATGACTGTTATGTTGCG+AGG | - | chr5_4:35993234-35993253 | None:intergenic | 40.0% | |
| TGATAGAACCGCAAATGTGA+AGG | + | chr5_4:35993439-35993458 | Msa0849360:intron | 40.0% | |
| GATAGAACCGCAAATGTGAA+GGG | + | chr5_4:35993440-35993459 | Msa0849360:intron | 40.0% | |
| !!! | ATTGGATGCTCGATTGGTTT+TGG | + | chr5_4:35993482-35993501 | Msa0849360:intron | 40.0% |
| CACAAGAAGGGGTTTAAACT+TGG | - | chr5_4:35993940-35993959 | None:intergenic | 40.0% | |
| CGAGTATAATCTTTCCATCC+AGG | + | chr5_4:35994099-35994118 | Msa0849360:intron | 40.0% | |
| GTTCAGGAACAACTAAGGAA+AGG | - | chr5_4:35994598-35994617 | None:intergenic | 40.0% | |
| TCTGTGTTCAGGAACAACTA+AGG | - | chr5_4:35994603-35994622 | None:intergenic | 40.0% | |
| ACTCATAAGCAGTTTAAGGG+GGG | - | chr5_4:35994989-35995008 | None:intergenic | 40.0% | |
| GACTCATAAGCAGTTTAAGG+GGG | - | chr5_4:35994990-35995009 | None:intergenic | 40.0% | |
| TTTGTGACTTCTGCAAAGCT+TGG | - | chr5_4:35995701-35995720 | None:intergenic | 40.0% | |
| TAATCGACAGCTAAATCTCC+AGG | - | chr5_4:35995880-35995899 | None:intergenic | 40.0% | |
| ! | TAGCTGTCGATTACAAGATC+TGG | + | chr5_4:35995887-35995906 | Msa0849360:intron | 40.0% |
| ! | AGATCTGGAATAGCAACAAC+AGG | + | chr5_4:35995902-35995921 | Msa0849360:intron | 40.0% |
| ! | GATCTGGAATAGCAACAACA+GGG | + | chr5_4:35995903-35995922 | Msa0849360:intron | 40.0% |
| ACAGGAACTTCACTAGCTAA+TGG | + | chr5_4:35995987-35996006 | Msa0849360:intron | 40.0% | |
| CAGGAACTTCACTAGCTAAT+GGG | + | chr5_4:35995988-35996007 | Msa0849360:intron | 40.0% | |
| AGGAACTTCACTAGCTAATG+GGG | + | chr5_4:35995989-35996008 | Msa0849360:intron | 40.0% | |
| !! | ATGGGGTTCGATTTTGATGA+TGG | + | chr5_4:35996006-35996025 | Msa0849360:intron | 40.0% |
| !! | TGGGGTTCGATTTTGATGAT+GGG | + | chr5_4:35996007-35996026 | Msa0849360:intron | 40.0% |
| TGGATGGCCAATAAAAACGT+TGG | + | chr5_4:35996630-35996649 | Msa0849360:intron | 40.0% | |
| !! | TTGTTGAAGTGAGAGCATCT+AGG | + | chr5_4:35996718-35996737 | Msa0849360:intron | 40.0% |
| TACTTCACACAATACCCTGA+AGG | + | chr5_4:35996792-35996811 | Msa0849360:intron | 40.0% | |
| ACCCTGAAGGACAAAATGAT+TGG | + | chr5_4:35996805-35996824 | Msa0849360:intron | 40.0% | |
| GTTGGCTGTGATTAAGACTA+AGG | + | chr5_4:35996827-35996846 | Msa0849360:intron | 40.0% | |
| TGGTATGGAATATCTCTCTC+GGG | - | chr5_4:35996888-35996907 | None:intergenic | 40.0% | |
| ! | GCGATTGATTCATCTTGGTA+TGG | - | chr5_4:35996903-35996922 | None:intergenic | 40.0% |
| ! | CATGTGCGATTGATTCATCT+TGG | - | chr5_4:35996908-35996927 | None:intergenic | 40.0% |
| CAAGATGAATCAATCGCACA+TGG | + | chr5_4:35996906-35996925 | Msa0849360:intron | 40.0% | |
| ! | GGAGAAATTGAGGAAGCATA+CGG | + | chr5_4:35996973-35996992 | Msa0849360:intron | 40.0% |
| CAGATGTCAAATAGAGGCAA+AGG | + | chr5_4:35997214-35997233 | Msa0849360:intron | 40.0% | |
| TCAAATAGAGGCAAAGGAAG+AGG | + | chr5_4:35997220-35997239 | Msa0849360:intron | 40.0% | |
| AAAGGAAGAGGCAAGAGAAA+AGG | + | chr5_4:35997232-35997251 | Msa0849360:intron | 40.0% | |
| AGAGGCAAGAGAAAAGGTAA+AGG | + | chr5_4:35997238-35997257 | Msa0849360:intron | 40.0% | |
| ATCTTCCCAAACTAACCCAA+AGG | + | chr5_4:35997280-35997299 | Msa0849360:intron | 40.0% | |
| GGAAATGGTAACTTGGGTTA+TGG | - | chr5_4:35997438-35997457 | None:intergenic | 40.0% | |
| ! | GGAAATGATAACTTGGGTTG+TGG | - | chr5_4:35997506-35997525 | None:intergenic | 40.0% |
| TAGCAATAGCATGGATTTGG+AGG | - | chr5_4:35997646-35997665 | None:intergenic | 40.0% | |
| GTGTAGCAATAGCATGGATT+TGG | - | chr5_4:35997649-35997668 | None:intergenic | 40.0% | |
| !!! | TGGAAGTTAGGGTTTTGGGT+AGG | + | chr5_4:35989374-35989393 | Msa0849360:CDS | 45.0% |
| ! | TGTCACTTGGAAGTGGTAAC+TGG | + | chr5_4:35989410-35989429 | Msa0849360:CDS | 45.0% |
| GTCACTTGGAAGTGGTAACT+GGG | + | chr5_4:35989411-35989430 | Msa0849360:CDS | 45.0% | |
| TCACTTGGAAGTGGTAACTG+GGG | + | chr5_4:35989412-35989431 | Msa0849360:CDS | 45.0% | |
| CAGAGCAAGACAAACAGAAC+CGG | - | chr5_4:35989807-35989826 | None:intergenic | 45.0% | |
| AGCACAAAAACACCACGAAC+AGG | - | chr5_4:35989836-35989855 | None:intergenic | 45.0% | |
| TTTGTCACTGTTATGGCAGG+TGG | + | chr5_4:35990078-35990097 | Msa0849360:intron | 45.0% | |
| ACATGTGTCTGATGTGTCTC+AGG | + | chr5_4:35990349-35990368 | Msa0849360:intron | 45.0% | |
| TCGATTCCCTTCCATGTGTT+TGG | - | chr5_4:35990462-35990481 | None:intergenic | 45.0% | |
| !!! | ATGTTTTAGCTTCCCCCAAC+TGG | - | chr5_4:35990652-35990671 | None:intergenic | 45.0% |
| !! | AGGTAGTTGGTGATGTCATG+AGG | + | chr5_4:35991164-35991183 | Msa0849360:intron | 45.0% |
| !! | TTTTGAGGAGTTTGGCATGG+GGG | + | chr5_4:35991340-35991359 | Msa0849360:intron | 45.0% |
| GGGATGAGCACAACAAATTG+TGG | + | chr5_4:35991438-35991457 | Msa0849360:intron | 45.0% | |
| CAACAAAATCGGTCTCTGCT+TGG | + | chr5_4:35991576-35991595 | Msa0849360:intron | 45.0% | |
| ! | TCGCTATTTCGGTCTCTATC+TGG | + | chr5_4:35991938-35991957 | Msa0849360:intron | 45.0% |
| ATTAGCATGGTCGTCCTCAT+TGG | + | chr5_4:35992412-35992431 | Msa0849360:intron | 45.0% | |
| TTCTATGGACCAAGCCAATG+AGG | - | chr5_4:35992429-35992448 | None:intergenic | 45.0% | |
| !! | CATTGGCTTGGTCCATAGAA+TGG | + | chr5_4:35992429-35992448 | Msa0849360:intron | 45.0% |
| CGGTTCTTCTTCAACTGAGT+GGG | - | chr5_4:35992594-35992613 | None:intergenic | 45.0% | |
| CCACTCAGTTGAAGAAGAAC+CGG | + | chr5_4:35992592-35992611 | Msa0849360:intron | 45.0% | |
| !! | ACACAAGAAGCATCTTCGCA+AGG | - | chr5_4:35992737-35992756 | None:intergenic | 45.0% |
| ! | ATGGTGTTAGGGGTCTGTTA+TGG | - | chr5_4:35993152-35993171 | None:intergenic | 45.0% |
| ATCGAGCATCCAATTGTGGA+GGG | - | chr5_4:35993476-35993495 | None:intergenic | 45.0% | |
| AATCGAGCATCCAATTGTGG+AGG | - | chr5_4:35993477-35993496 | None:intergenic | 45.0% | |
| TCCACAATTGGATGCTCGAT+TGG | + | chr5_4:35993476-35993495 | Msa0849360:intron | 45.0% | |
| ACCAATCGAGCATCCAATTG+TGG | - | chr5_4:35993480-35993499 | None:intergenic | 45.0% | |
| CTTTCTTGCCCATCTCTCAT+CGG | + | chr5_4:35993656-35993675 | Msa0849360:intron | 45.0% | |
| TTTCTTGCCCATCTCTCATC+GGG | + | chr5_4:35993657-35993676 | Msa0849360:intron | 45.0% | |
| GGGAGAAATAGGTGTATGTG+AGG | + | chr5_4:35993757-35993776 | Msa0849360:intron | 45.0% | |
| GGGAGAAATAGGTGTATGTG+AGG | + | chr5_4:35993757-35993776 | Msa0849360:intron | 45.0% | |
| TGGAGAAACAGATCCAAACC+TGG | - | chr5_4:35993896-35993915 | None:intergenic | 45.0% | |
| CAACAACCAGGCACTTCAAA+TGG | - | chr5_4:35994036-35994055 | None:intergenic | 45.0% | |
| ! | CATTTGAAGTGCCTGGTTGT+TGG | + | chr5_4:35994034-35994053 | Msa0849360:intron | 45.0% |
| TCTTACGCAATCCAACAACC+AGG | - | chr5_4:35994048-35994067 | None:intergenic | 45.0% | |
| ! | CGTGAATTTGAGGTAGGGTT+AGG | - | chr5_4:35994081-35994100 | None:intergenic | 45.0% |
| CTCATAAGCAGTTTAAGGGG+GGG | - | chr5_4:35994988-35995007 | None:intergenic | 45.0% | |
| GACATATGCATGTTTCACGC+AGG | - | chr5_4:35995287-35995306 | None:intergenic | 45.0% | |
| TGTTCTATATCAAGTGGGGG+TGG | - | chr5_4:35995466-35995485 | None:intergenic | 45.0% | |
| !! | TCTGCAGAGCTTTGTTCTGT+TGG | - | chr5_4:35995538-35995557 | None:intergenic | 45.0% |
| ACAGAGAAGAGGAACAAACC+TGG | + | chr5_4:35995859-35995878 | Msa0849360:intron | 45.0% | |
| ! | TACCTCTAAGGGAGAACCAA+AGG | + | chr5_4:35997538-35997557 | Msa0849360:CDS | 45.0% |
| !! | AACCTTTGGTTCTCCCTTAG+AGG | - | chr5_4:35997543-35997562 | None:intergenic | 45.0% |
| GAGCAAGATTGTCTCTGCTA+AGG | + | chr5_4:35997610-35997629 | Msa0849360:CDS | 45.0% | |
| CAAGATTGTCTCTGCTAAGG+TGG | + | chr5_4:35997613-35997632 | Msa0849360:CDS | 45.0% | |
| CAATAGCATGGATTTGGAGG+CGG | - | chr5_4:35997643-35997662 | None:intergenic | 45.0% | |
| !!! | ATTATCATATTATTATTTTT+AGG | + | chr5_4:35997995-35998014 | Msa0849360:three_prime_UTR | 5.0% |
| GCTCTGTGATATCCTGTTCG+TGG | + | chr5_4:35989821-35989840 | Msa0849360:intron | 50.0% | |
| !! | GGTGTTTTTGTGCTTAGGCC+TGG | + | chr5_4:35989842-35989861 | Msa0849360:intron | 50.0% |
| TAGTAAAGGTCTGCGCTTGC+CGG | + | chr5_4:35990141-35990160 | Msa0849360:intron | 50.0% | |
| !! | GCCGGTTTGTAATGTGTCTC+AGG | + | chr5_4:35990159-35990178 | Msa0849360:intron | 50.0% |
| ACATCTCACGCAGCAAACTG+TGG | - | chr5_4:35990514-35990533 | None:intergenic | 50.0% | |
| GTTAGAGAAGGTTGCTCGCA+AGG | + | chr5_4:35991012-35991031 | Msa0849360:CDS | 50.0% | |
| GGTCTCAAAGAACCATGCTG+AGG | + | chr5_4:35991311-35991330 | Msa0849360:intron | 50.0% | |
| TGTGGCGTATCTGTTCAAGG+TGG | + | chr5_4:35991456-35991475 | Msa0849360:intron | 50.0% | |
| TCTGTTCAAGGTGGCGAGAA+TGG | + | chr5_4:35991465-35991484 | Msa0849360:intron | 50.0% | |
| CTGTTCAAGGTGGCGAGAAT+GGG | + | chr5_4:35991466-35991485 | Msa0849360:intron | 50.0% | |
| AGTCGCTAGACCAGTCACAA+AGG | - | chr5_4:35991658-35991677 | None:intergenic | 50.0% | |
| !! | TGGCTTGGTCCATAGAATGG+TGG | + | chr5_4:35992432-35992451 | Msa0849360:intron | 50.0% |
| ! | GGCTTGGTCCATAGAATGGT+GGG | + | chr5_4:35992433-35992452 | Msa0849360:intron | 50.0% |
| ! | TTGGTCCATAGAATGGTGGG+TGG | + | chr5_4:35992436-35992455 | Msa0849360:intron | 50.0% |
| !! | TGGTCCATAGAATGGTGGGT+GGG | + | chr5_4:35992437-35992456 | Msa0849360:intron | 50.0% |
| CTTCAACTGAGTGGGTGCAA+AGG | - | chr5_4:35992586-35992605 | None:intergenic | 50.0% | |
| CCGGTTCTTCTTCAACTGAG+TGG | - | chr5_4:35992595-35992614 | None:intergenic | 50.0% | |
| ! | GTCCACACCTCTAGCTCATT+TGG | + | chr5_4:35992701-35992720 | Msa0849360:intron | 50.0% |
| CACCAAATGAGCTAGAGGTG+TGG | - | chr5_4:35992706-35992725 | None:intergenic | 50.0% | |
| ! | CACACCTCTAGCTCATTTGG+TGG | + | chr5_4:35992704-35992723 | Msa0849360:intron | 50.0% |
| ! | ACCTCTAGCTCATTTGGTGG+AGG | + | chr5_4:35992707-35992726 | Msa0849360:intron | 50.0% |
| AGGGGTCTGTTATGGTGTGA+GGG | - | chr5_4:35993144-35993163 | None:intergenic | 50.0% | |
| TAGGGGTCTGTTATGGTGTG+AGG | - | chr5_4:35993145-35993164 | None:intergenic | 50.0% | |
| GCATCCAATTGTGGAGGGTT+GGG | - | chr5_4:35993471-35993490 | None:intergenic | 50.0% | |
| AGCATCCAATTGTGGAGGGT+TGG | - | chr5_4:35993472-35993491 | None:intergenic | 50.0% | |
| TAGGCCGAGCTGGATTAATG+AGG | - | chr5_4:35993571-35993590 | None:intergenic | 50.0% | |
| CGATAATGAATAGGCCGAGC+TGG | - | chr5_4:35993581-35993600 | None:intergenic | 50.0% | |
| AGGCTCGCGCGATAATGAAT+AGG | - | chr5_4:35993590-35993609 | None:intergenic | 50.0% | |
| TTGTCCACCCGATGAGAGAT+GGG | - | chr5_4:35993667-35993686 | None:intergenic | 50.0% | |
| TTTGTCCACCCGATGAGAGA+TGG | - | chr5_4:35993668-35993687 | None:intergenic | 50.0% | |
| GGTCGCTGATCCTTTGTGAC+TGG | + | chr5_4:35991645-35991664 | Msa0849360:intron | 55.0% | |
| ! | CATGGTCGTCCTCATTGGCT+TGG | + | chr5_4:35992417-35992436 | Msa0849360:intron | 55.0% |
| GAACCGGAGCCACGATAATG+TGG | + | chr5_4:35992608-35992627 | Msa0849360:intron | 55.0% | |
| CGTCCACATTATCGTGGCTC+CGG | - | chr5_4:35992614-35992633 | None:intergenic | 55.0% | |
| GCAGGACGTCCACATTATCG+TGG | - | chr5_4:35992620-35992639 | None:intergenic | 55.0% | |
| ! | GAGGTGTGGACTGATGTTGC+AGG | - | chr5_4:35992692-35992711 | None:intergenic | 55.0% |
| GCCTCCACCAAATGAGCTAG+AGG | - | chr5_4:35992711-35992730 | None:intergenic | 55.0% | |
| CGGCATCCCACCTTCTAATG+TGG | - | chr5_4:35992961-35992980 | None:intergenic | 55.0% | |
| GGTGTGAGGGGATCTGTTGT+TGG | - | chr5_4:35993131-35993150 | None:intergenic | 55.0% | |
| GGGGTCTGTTATGGTGTGAG+GGG | - | chr5_4:35993143-35993162 | None:intergenic | 55.0% | |
| GGAGGGTCCCTTCACATTTG+CGG | - | chr5_4:35993450-35993469 | None:intergenic | 55.0% | |
| CCAATTGTGGAGGGTTGGGA+GGG | - | chr5_4:35993467-35993486 | None:intergenic | 55.0% | |
| TCCAATTGTGGAGGGTTGGG+AGG | - | chr5_4:35993468-35993487 | None:intergenic | 55.0% | |
| CAGTTTAAGGGGGGGCAGTT+TGG | - | chr5_4:35994980-35994999 | None:intergenic | 55.0% | |
| CCAGCCCACCCACCATTCTA+TGG | - | chr5_4:35992444-35992463 | None:intergenic | 60.0% | |
| !! | CCATAGAATGGTGGGTGGGC+TGG | + | chr5_4:35992441-35992460 | Msa0849360:intron | 60.0% |
| !! | GTGGGTGGGCTGGAAGTTCA+TGG | + | chr5_4:35992451-35992470 | Msa0849360:intron | 60.0% |
| CCCTCCCAACCCTCCACAAT+TGG | + | chr5_4:35993464-35993483 | Msa0849360:intron | 60.0% | |
| CTTGCCCATCTCTCATCGGG+TGG | + | chr5_4:35993660-35993679 | Msa0849360:intron | 60.0% | |
| !! | CACGCAGGTAGAAGTGCTGC+AGG | - | chr5_4:35995272-35995291 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 35989365 | 35998076 | 35989365 | ID=Msa0849360;Name=Msa0849360 |
| chr5_4 | mRNA | 35989365 | 35998076 | 35989365 | ID=Msa0849360-mRNA-1;Parent=Msa0849360;Name=Msa0849360-mRNA-1;_AED=0.13;_eAED=0.21;_QI=0|0.5|0.42|0.85|0.16|0.42|7|178|167 |
| chr5_4 | exon | 35989365 | 35989433 | 35989365 | ID=Msa0849360-mRNA-1:exon:11994;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35990441 | 35990524 | 35990441 | ID=Msa0849360-mRNA-1:exon:11995;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35990995 | 35991033 | 35990995 | ID=Msa0849360-mRNA-1:exon:11996;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35991166 | 35991232 | 35991166 | ID=Msa0849360-mRNA-1:exon:11997;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35997168 | 35997173 | 35997168 | ID=Msa0849360-mRNA-1:exon:11998;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35997483 | 35997670 | 35997483 | ID=Msa0849360-mRNA-1:exon:11999;Parent=Msa0849360-mRNA-1 |
| chr5_4 | exon | 35997848 | 35998076 | 35997848 | ID=Msa0849360-mRNA-1:exon:12000;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35989365 | 35989433 | 35989365 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35990441 | 35990524 | 35990441 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35990995 | 35991033 | 35990995 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35991166 | 35991232 | 35991166 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35997168 | 35997173 | 35997168 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35997483 | 35997670 | 35997483 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | CDS | 35997848 | 35997898 | 35997848 | ID=Msa0849360-mRNA-1:cds;Parent=Msa0849360-mRNA-1 |
| chr5_4 | three_prime_UTR | 35997899 | 35998076 | 35997899 | ID=Msa0849360-mRNA-1:three_prime_utr;Parent=Msa0849360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
