Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092990 | AES77573.1 | 57.500 | 120 | 36 | 4 | 1 | 105 | 1 | 120 | 1.82e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092990 | G7L456 | 57.500 | 120 | 36 | 4 | 1 | 105 | 1 | 120 | 8.71e-24 | 98.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa1092990 | 0.811877 | 5.619573e-51 | -8.615850e-47 |
| Msa0013750 | Msa1092990 | 0.834044 | 3.762060e-56 | -8.615850e-47 |
| Msa0014330 | Msa1092990 | 0.815746 | 7.894936e-52 | -8.615850e-47 |
| Msa0015750 | Msa1092990 | 0.880050 | 7.552011e-70 | -8.615850e-47 |
| Msa0016570 | Msa1092990 | 0.871082 | 8.957091e-67 | -8.615850e-47 |
| Msa0016580 | Msa1092990 | 0.848307 | 6.664027e-60 | -8.615850e-47 |
| Msa0023610 | Msa1092990 | 0.809867 | 1.530053e-50 | -8.615850e-47 |
| Msa0028480 | Msa1092990 | 0.800902 | 1.159178e-48 | -8.615850e-47 |
| Msa0062860 | Msa1092990 | 0.815365 | 9.595246e-52 | -8.615850e-47 |
| Msa0078590 | Msa1092990 | 0.803086 | 4.122809e-49 | -8.615850e-47 |
| Msa0092630 | Msa1092990 | 0.830052 | 3.648997e-55 | -8.615850e-47 |
| Msa0102070 | Msa1092990 | 0.881003 | 3.443840e-70 | -8.615850e-47 |
| Msa0107580 | Msa1092990 | 0.814299 | 1.653466e-51 | -8.615850e-47 |
| Msa0110270 | Msa1092990 | 0.850631 | 1.498999e-60 | -8.615850e-47 |
| Msa0111510 | Msa1092990 | 0.837547 | 4.873183e-57 | -8.615850e-47 |
| Msa0118050 | Msa1092990 | 0.834646 | 2.657649e-56 | -8.615850e-47 |
| Msa0118060 | Msa1092990 | 0.842671 | 2.243182e-58 | -8.615850e-47 |
| Msa0604350 | Msa1092990 | 0.856023 | 4.258146e-62 | -8.615850e-47 |
| Msa0636170 | Msa1092990 | 0.881505 | 2.269583e-70 | -8.615850e-47 |
| Msa0639610 | Msa1092990 | 0.860175 | 2.480910e-63 | -8.615850e-47 |
| Msa0668260 | Msa1092990 | 0.803842 | 2.874241e-49 | -8.615850e-47 |
| Msa0673450 | Msa1092990 | 0.814728 | 1.328957e-51 | -8.615850e-47 |
| Msa0675510 | Msa1092990 | 0.819587 | 1.073854e-52 | -8.615850e-47 |
| Msa0675830 | Msa1092990 | 0.831255 | 1.851852e-55 | -8.615850e-47 |
| Msa0678930 | Msa1092990 | 0.853488 | 2.311495e-61 | -8.615850e-47 |
| Msa0694370 | Msa1092990 | 0.863939 | 1.739471e-64 | -8.615850e-47 |
| Msa0697060 | Msa1092990 | 0.800042 | 1.735408e-48 | -8.615850e-47 |
| Msa0722510 | Msa1092990 | 0.823093 | 1.667384e-53 | -8.615850e-47 |
| Msa0725850 | Msa1092990 | 0.831127 | 1.990458e-55 | -8.615850e-47 |
| Msa0726140 | Msa1092990 | 0.913174 | 8.354917e-84 | -8.615850e-47 |
| Msa0729800 | Msa1092990 | 0.872815 | 2.378898e-67 | -8.615850e-47 |
| Msa0732310 | Msa1092990 | 0.820425 | 6.907897e-53 | -8.615850e-47 |
| Msa0732540 | Msa1092990 | 0.802604 | 5.185383e-49 | -8.615850e-47 |
| Msa0732710 | Msa1092990 | 0.859404 | 4.233052e-63 | -8.615850e-47 |
| Msa0733290 | Msa1092990 | 0.878134 | 3.589502e-69 | -8.615850e-47 |
| Msa0735080 | Msa1092990 | 0.830304 | 3.165942e-55 | -8.615850e-47 |
| Msa0736000 | Msa1092990 | 0.806953 | 6.403971e-50 | -8.615850e-47 |
| Msa0738490 | Msa1092990 | 0.811443 | 6.981780e-51 | -8.615850e-47 |
| Msa0741570 | Msa1092990 | 0.800024 | 1.749982e-48 | -8.615850e-47 |
| Msa0741990 | Msa1092990 | 0.841751 | 3.928695e-58 | -8.615850e-47 |
| Msa0743810 | Msa1092990 | 0.937418 | 3.580099e-98 | -8.615850e-47 |
| Msa0745060 | Msa1092990 | 0.945632 | 2.121845e-104 | -8.615850e-47 |
| Msa0762360 | Msa1092990 | 0.803606 | 3.217249e-49 | -8.615850e-47 |
| Msa0763260 | Msa1092990 | 0.820936 | 5.270811e-53 | -8.615850e-47 |
| Msa0764960 | Msa1092990 | 0.846409 | 2.211973e-59 | -8.615850e-47 |
| Msa0766630 | Msa1092990 | 0.813014 | 3.170921e-51 | -8.615850e-47 |
| Msa0767720 | Msa1092990 | 0.886323 | 3.778763e-72 | -8.615850e-47 |
| Msa0775300 | Msa1092990 | 0.845508 | 3.887656e-59 | -8.615850e-47 |
| Msa0777870 | Msa1092990 | 0.873974 | 9.695145e-68 | -8.615850e-47 |
| Msa0783160 | Msa1092990 | 0.914322 | 2.196849e-84 | -8.615850e-47 |
| Msa0784290 | Msa1092990 | 0.847179 | 1.362466e-59 | -8.615850e-47 |
| Msa0784300 | Msa1092990 | 0.841479 | 4.633750e-58 | -8.615850e-47 |
| Msa0787600 | Msa1092990 | 0.870979 | 9.686639e-67 | -8.615850e-47 |
| Msa0789250 | Msa1092990 | 0.851755 | 7.217170e-61 | -8.615850e-47 |
| Msa0804210 | Msa1092990 | 0.819406 | 1.181338e-52 | -8.615850e-47 |
| Msa0808010 | Msa1092990 | 0.875921 | 2.103643e-68 | -8.615850e-47 |
| Msa0808020 | Msa1092990 | 0.870849 | 1.069415e-66 | -8.615850e-47 |
| Msa0811080 | Msa1092990 | 0.857336 | 1.749847e-62 | -8.615850e-47 |
| Msa0811270 | Msa1092990 | 0.873992 | 9.560948e-68 | -8.615850e-47 |
| Msa0824600 | Msa1092990 | 0.838587 | 2.631374e-57 | -8.615850e-47 |
| Msa0825860 | Msa1092990 | 0.941435 | 4.182935e-101 | -8.615850e-47 |
| Msa0826750 | Msa1092990 | 0.803030 | 4.234762e-49 | -8.615850e-47 |
| Msa0833290 | Msa1092990 | 0.842622 | 2.310772e-58 | -8.615850e-47 |
| Msa0123810 | Msa1092990 | 0.852405 | 4.718264e-61 | -8.615850e-47 |
| Msa0124100 | Msa1092990 | 0.818479 | 1.918508e-52 | -8.615850e-47 |
| Msa0124150 | Msa1092990 | 0.813045 | 3.122812e-51 | -8.615850e-47 |
| Msa0142220 | Msa1092990 | 0.846993 | 1.531416e-59 | -8.615850e-47 |
| Msa0145750 | Msa1092990 | 0.886440 | 3.415566e-72 | -8.615850e-47 |
| Msa0153200 | Msa1092990 | 0.808733 | 2.678928e-50 | -8.615850e-47 |
| Msa0153910 | Msa1092990 | 0.863139 | 3.080395e-64 | -8.615850e-47 |
| Msa0192970 | Msa1092990 | 0.800711 | 1.267652e-48 | -8.615850e-47 |
| Msa0197010 | Msa1092990 | 0.818578 | 1.821626e-52 | -8.615850e-47 |
| Msa0200000 | Msa1092990 | 0.861290 | 1.137914e-63 | -8.615850e-47 |
| Msa0200940 | Msa1092990 | 0.801357 | 9.354860e-49 | -8.615850e-47 |
| Msa0214300 | Msa1092990 | 0.805823 | 1.108299e-49 | -8.615850e-47 |
| Msa0214370 | Msa1092990 | 0.803194 | 3.915682e-49 | -8.615850e-47 |
| Msa0227480 | Msa1092990 | 0.860705 | 1.713981e-63 | -8.615850e-47 |
| Msa0231000 | Msa1092990 | 0.832412 | 9.593222e-56 | -8.615850e-47 |
| Msa0232850 | Msa1092990 | 0.953975 | 8.339287e-112 | -8.615850e-47 |
| Msa0235140 | Msa1092990 | 0.815382 | 9.512386e-52 | -8.615850e-47 |
| Msa0365500 | Msa1092990 | 0.890443 | 9.807287e-74 | -8.615850e-47 |
| Msa0366580 | Msa1092990 | 0.826029 | 3.393907e-54 | -8.615850e-47 |
| Msa0384800 | Msa1092990 | 0.886072 | 4.698668e-72 | -8.615850e-47 |
| Msa0384890 | Msa1092990 | 0.830059 | 3.633834e-55 | -8.615850e-47 |
| Msa0394970 | Msa1092990 | 0.814812 | 1.272917e-51 | -8.615850e-47 |
| Msa0396600 | Msa1092990 | 0.826707 | 2.340080e-54 | -8.615850e-47 |
| Msa0406120 | Msa1092990 | 0.854068 | 1.574207e-61 | -8.615850e-47 |
| Msa0406280 | Msa1092990 | 0.816994 | 4.150940e-52 | -8.615850e-47 |
| Msa0407750 | Msa1092990 | 0.816147 | 6.422852e-52 | -8.615850e-47 |
| Msa0414410 | Msa1092990 | 0.881138 | 3.079328e-70 | -8.615850e-47 |
| Msa0414420 | Msa1092990 | 0.908499 | 1.598468e-81 | -8.615850e-47 |
| Msa0423020 | Msa1092990 | 0.843503 | 1.346098e-58 | -8.615850e-47 |
| Msa0428010 | Msa1092990 | 0.815190 | 1.049744e-51 | -8.615850e-47 |
| Msa0429880 | Msa1092990 | 0.806101 | 9.686011e-50 | -8.615850e-47 |
| Msa0430420 | Msa1092990 | 0.809420 | 1.908670e-50 | -8.615850e-47 |
| Msa0431690 | Msa1092990 | 0.810234 | 1.275395e-50 | -8.615850e-47 |
| Msa0435230 | Msa1092990 | 0.835502 | 1.617030e-56 | -8.615850e-47 |
| Msa0436780 | Msa1092990 | 0.858520 | 7.786006e-63 | -8.615850e-47 |
| Msa0436800 | Msa1092990 | 0.813653 | 2.295840e-51 | -8.615850e-47 |
| Msa0437990 | Msa1092990 | 0.810096 | 1.366367e-50 | -8.615850e-47 |
| Msa0438620 | Msa1092990 | 0.871059 | 9.116119e-67 | -8.615850e-47 |
| Msa0444130 | Msa1092990 | 0.821937 | 3.094911e-53 | -8.615850e-47 |
| Msa0450000 | Msa1092990 | 0.869252 | 3.560163e-66 | -8.615850e-47 |
| Msa0450570 | Msa1092990 | 0.831843 | 1.326558e-55 | -8.615850e-47 |
| Msa0451730 | Msa1092990 | 0.860841 | 1.558427e-63 | -8.615850e-47 |
| Msa0452620 | Msa1092990 | 0.812810 | 3.515631e-51 | -8.615850e-47 |
| Msa0452900 | Msa1092990 | 0.927445 | 1.163375e-91 | -8.615850e-47 |
| Msa0453120 | Msa1092990 | 0.889462 | 2.369775e-73 | -8.615850e-47 |
| Msa0454370 | Msa1092990 | 0.826848 | 2.165252e-54 | -8.615850e-47 |
| Msa0454910 | Msa1092990 | 0.863424 | 2.515131e-64 | -8.615850e-47 |
| Msa0458450 | Msa1092990 | 0.819399 | 1.185271e-52 | -8.615850e-47 |
| Msa0459160 | Msa1092990 | 0.852859 | 3.500506e-61 | -8.615850e-47 |
| Msa0459170 | Msa1092990 | 0.808446 | 3.085190e-50 | -8.615850e-47 |
| Msa0479340 | Msa1092990 | 0.807837 | 4.158072e-50 | -8.615850e-47 |
| Msa0482620 | Msa1092990 | 0.826668 | 2.390317e-54 | -8.615850e-47 |
| Msa0981270 | Msa1092990 | 0.833121 | 6.396832e-56 | -8.615850e-47 |
| Msa0981370 | Msa1092990 | 0.856065 | 4.139291e-62 | -8.615850e-47 |
| Msa0986360 | Msa1092990 | 0.823151 | 1.616139e-53 | -8.615850e-47 |
| Msa0986400 | Msa1092990 | 0.804939 | 1.697982e-49 | -8.615850e-47 |
| Msa0989060 | Msa1092990 | 0.896771 | 2.679148e-76 | -8.615850e-47 |
| Msa0989890 | Msa1092990 | 0.807709 | 4.427861e-50 | -8.615850e-47 |
| Msa1002310 | Msa1092990 | 0.807669 | 4.515624e-50 | -8.615850e-47 |
| Msa1014540 | Msa1092990 | 0.812209 | 4.757040e-51 | -8.615850e-47 |
| Msa1016280 | Msa1092990 | 0.911189 | 8.061012e-83 | -8.615850e-47 |
| Msa1023050 | Msa1092990 | 0.817616 | 3.006651e-52 | -8.615850e-47 |
| Msa1024240 | Msa1092990 | 0.889358 | 2.600874e-73 | -8.615850e-47 |
| Msa1024370 | Msa1092990 | 0.827340 | 1.651544e-54 | -8.615850e-47 |
| Msa1025360 | Msa1092990 | 0.916279 | 2.155086e-85 | -8.615850e-47 |
| Msa1025370 | Msa1092990 | 0.908497 | 1.602517e-81 | -8.615850e-47 |
| Msa1030060 | Msa1092990 | 0.843616 | 1.255971e-58 | -8.615850e-47 |
| Msa1037200 | Msa1092990 | 0.808375 | 3.194305e-50 | -8.615850e-47 |
| Msa1042430 | Msa1092990 | 0.816740 | 4.733361e-52 | -8.615850e-47 |
| Msa1044830 | Msa1092990 | 0.902907 | 5.992858e-79 | -8.615850e-47 |
| Msa1044840 | Msa1092990 | 0.918387 | 1.660378e-86 | -8.615850e-47 |
| Msa1054790 | Msa1092990 | 0.823700 | 1.202945e-53 | -8.615850e-47 |
| Msa1057920 | Msa1092990 | 0.818660 | 1.746035e-52 | -8.615850e-47 |
| Msa1060840 | Msa1092990 | 0.843679 | 1.208209e-58 | -8.615850e-47 |
| Msa1062810 | Msa1092990 | 0.836439 | 9.353709e-57 | -8.615850e-47 |
| Msa1077460 | Msa1092990 | 0.823565 | 1.293562e-53 | -8.615850e-47 |
| Msa1079180 | Msa1092990 | 0.802931 | 4.437579e-49 | -8.615850e-47 |
| Msa1087490 | Msa1092990 | 0.809750 | 1.621312e-50 | -8.615850e-47 |
| Msa1092990 | Msa1096580 | 0.821226 | 4.519381e-53 | -8.615850e-47 |
| Msa1092990 | Msa1099970 | 0.816379 | 5.701367e-52 | -8.615850e-47 |
| Msa1092990 | Msa1100980 | 0.921330 | 4.109023e-88 | -8.615850e-47 |
| Msa1092990 | Msa1109440 | 0.902258 | 1.165197e-78 | -8.615850e-47 |
| Msa1092990 | Msa1112300 | 0.813436 | 2.562496e-51 | -8.615850e-47 |
| Msa1092990 | Msa1114030 | 0.819122 | 1.370804e-52 | -8.615850e-47 |
| Msa1092990 | Msa1116260 | 0.804352 | 2.250981e-49 | -8.615850e-47 |
| Msa1092990 | Msa1121200 | 0.878215 | 3.363378e-69 | -8.615850e-47 |
| Msa1092990 | Msa1123420 | 0.812759 | 3.607449e-51 | -8.615850e-47 |
| Msa1092990 | Msa1135740 | 0.900615 | 6.133954e-78 | -8.615850e-47 |
| Msa1092990 | Msa1136090 | 0.862226 | 5.886920e-64 | -8.615850e-47 |
| Msa1092990 | Msa1146110 | 0.915080 | 8.994108e-85 | -8.615850e-47 |
| Msa1092990 | Msa1148020 | 0.828277 | 9.831137e-55 | -8.615850e-47 |
| Msa1092990 | Msa1149360 | 0.828036 | 1.123569e-54 | -8.615850e-47 |
| Msa1092990 | Msa1150370 | 0.856942 | 2.287226e-62 | -8.615850e-47 |
| Msa1092990 | Msa1160670 | 0.822233 | 2.643404e-53 | -8.615850e-47 |
| Msa1092990 | Msa1160690 | 0.805727 | 1.160871e-49 | -8.615850e-47 |
| Msa1092990 | Msa1164120 | 0.823076 | 1.682412e-53 | -8.615850e-47 |
| Msa1092990 | Msa1173920 | 0.867265 | 1.554797e-65 | -8.615850e-47 |
| Msa1092990 | Msa1178340 | 0.837687 | 4.487764e-57 | -8.615850e-47 |
| Msa1092990 | Msa1182090 | 0.830182 | 3.391290e-55 | -8.615850e-47 |
| Msa1092990 | Msa1184420 | 0.816414 | 5.599648e-52 | -8.615850e-47 |
| Msa1092990 | Msa1187940 | 0.912044 | 3.056434e-83 | -8.615850e-47 |
| Msa1092990 | Msa1187950 | 0.890726 | 7.589164e-74 | -8.615850e-47 |
| Msa1092990 | Msa1192640 | 0.899572 | 1.735845e-77 | -8.615850e-47 |
| Msa1092990 | Msa1193730 | 0.829113 | 6.174052e-55 | -8.615850e-47 |
| Msa1092990 | Msa1211030 | 0.807327 | 5.335726e-50 | -8.615850e-47 |
| Msa1092990 | Msa1230430 | 0.829090 | 6.250829e-55 | -8.615850e-47 |
| Msa1092990 | Msa1246880 | 0.866827 | 2.144712e-65 | -8.615850e-47 |
| Msa1092990 | Msa1248300 | 0.806938 | 6.449025e-50 | -8.615850e-47 |
| Msa1092990 | Msa1248310 | 0.803044 | 4.205218e-49 | -8.615850e-47 |
| Msa1092990 | Msa1249490 | 0.803087 | 4.120013e-49 | -8.615850e-47 |
| Msa1092990 | Msa1251910 | 0.807695 | 4.458898e-50 | -8.615850e-47 |
| Msa1092990 | Msa1260100 | 0.849763 | 2.623898e-60 | -8.615850e-47 |
| Msa1092990 | Msa1269670 | 0.941142 | 6.944343e-101 | -8.615850e-47 |
| Msa1092990 | Msa1270230 | 0.932328 | 1.003676e-94 | -8.615850e-47 |
| Msa1092990 | Msa1270240 | 0.901029 | 4.049538e-78 | -8.615850e-47 |
| Msa1092990 | Msa1270270 | 0.910491 | 1.764994e-82 | -8.615850e-47 |
| Msa1092990 | Msa1273230 | 0.837907 | 3.939092e-57 | -8.615850e-47 |
| Msa1092990 | Msa1283330 | 0.908910 | 1.018729e-81 | -8.615850e-47 |
| Msa1092990 | Msa1284680 | 0.816184 | 6.301832e-52 | -8.615850e-47 |
| Msa1092990 | Msa1285930 | 0.921279 | 4.387341e-88 | -8.615850e-47 |
| Msa1092990 | Msa1287800 | 0.910556 | 1.640944e-82 | -8.615850e-47 |
| Msa1092990 | Msa1287810 | 0.922568 | 8.297371e-89 | -8.615850e-47 |
| Msa1092990 | Msa1287820 | 0.836265 | 1.035523e-56 | -8.615850e-47 |
| Msa1092990 | Msa1287830 | 0.833945 | 3.983210e-56 | -8.615850e-47 |
| Msa1092990 | Msa1289420 | 0.836428 | 9.414094e-57 | -8.615850e-47 |
| Msa1092990 | Msa1289430 | 0.872806 | 2.395616e-67 | -8.615850e-47 |
| Msa1092990 | Msa1297210 | 0.848870 | 4.651701e-60 | -8.615850e-47 |
| Msa1092990 | Msa1305480 | 0.851683 | 7.566157e-61 | -8.615850e-47 |
| Msa1092990 | Msa1307890 | 0.874217 | 8.026783e-68 | -8.615850e-47 |
| Msa1092990 | Msa1310120 | 0.832647 | 8.390413e-56 | -8.615850e-47 |
| Msa1092990 | Msa1314280 | 0.835228 | 1.896435e-56 | -8.615850e-47 |
| Msa1092990 | Msa1320300 | 0.873602 | 1.294384e-67 | -8.615850e-47 |
| Msa1092990 | Msa1321560 | 0.837959 | 3.821006e-57 | -8.615850e-47 |
| Msa1092990 | Msa1340590 | 0.875844 | 2.236144e-68 | -8.615850e-47 |
| Msa1092990 | Msa1342200 | 0.846396 | 2.230475e-59 | -8.615850e-47 |
| Msa1092990 | Msa1344520 | 0.812202 | 4.773669e-51 | -8.615850e-47 |
| Msa1092990 | Msa1369430 | 0.879623 | 1.071652e-69 | -8.615850e-47 |
| Msa1092990 | Msa1370210 | 0.802059 | 6.713020e-49 | -8.615850e-47 |
| Msa1092990 | Msa1382690 | 0.813540 | 2.430287e-51 | -8.615850e-47 |
| Msa1092990 | Msa1382700 | 0.846601 | 1.960215e-59 | -8.615850e-47 |
| Msa1092990 | Msa1386330 | 0.871231 | 8.003109e-67 | -8.615850e-47 |
| Msa1092990 | Msa1397150 | 0.829757 | 4.306593e-55 | -8.615850e-47 |
| Msa1092990 | Msa1397580 | 0.874115 | 8.692403e-68 | -8.615850e-47 |
| Msa1092990 | Msa1402790 | 0.846789 | 1.741457e-59 | -8.615850e-47 |
| Msa1092990 | Msa1402930 | 0.800840 | 1.193307e-48 | -8.615850e-47 |
| Msa1092990 | Msa1404000 | 0.914949 | 1.050997e-84 | -8.615850e-47 |
| Msa1092990 | Msa1408780 | 0.838463 | 2.833393e-57 | -8.615850e-47 |
| Msa1092990 | Msa1415310 | 0.900801 | 5.090024e-78 | -8.615850e-47 |
| Msa1092990 | Msa1422180 | 0.888740 | 4.515545e-73 | -8.615850e-47 |
| Msa1092990 | Msa1433120 | 0.882134 | 1.343628e-70 | -8.615850e-47 |
| Msa1092990 | Msa1438250 | 0.813948 | 1.976021e-51 | -8.615850e-47 |
| Msa1092990 | Msa1451190 | 0.826281 | 2.957421e-54 | -8.615850e-47 |
| Msa1092990 | Msa1451570 | 0.826586 | 2.500873e-54 | -8.615850e-47 |
| Msa1092990 | Msa1463140 | 0.809336 | 1.989807e-50 | -8.615850e-47 |
| Msa0251320 | Msa1092990 | 0.810504 | 1.115231e-50 | -8.615850e-47 |
| Msa0256440 | Msa1092990 | 0.841403 | 4.852368e-58 | -8.615850e-47 |
| Msa0267000 | Msa1092990 | 0.900877 | 4.717546e-78 | -8.615850e-47 |
| Msa0267010 | Msa1092990 | 0.911738 | 4.327353e-83 | -8.615850e-47 |
| Msa0270520 | Msa1092990 | 0.858705 | 6.856957e-63 | -8.615850e-47 |
| Msa0282310 | Msa1092990 | 0.816878 | 4.406459e-52 | -8.615850e-47 |
| Msa0285810 | Msa1092990 | 0.800239 | 1.582314e-48 | -8.615850e-47 |
| Msa0295770 | Msa1092990 | 0.816960 | 4.224771e-52 | -8.615850e-47 |
| Msa0304170 | Msa1092990 | 0.877381 | 6.580140e-69 | -8.615850e-47 |
| Msa0306460 | Msa1092990 | 0.880202 | 6.663638e-70 | -8.615850e-47 |
| Msa0309020 | Msa1092990 | 0.810219 | 1.285165e-50 | -8.615850e-47 |
| Msa0311750 | Msa1092990 | 0.817813 | 2.713916e-52 | -8.615850e-47 |
| Msa0313760 | Msa1092990 | 0.818168 | 2.256298e-52 | -8.615850e-47 |
| Msa0342240 | Msa1092990 | 0.901986 | 1.537192e-78 | -8.615850e-47 |
| Msa0349360 | Msa1092990 | 0.806085 | 9.763207e-50 | -8.615850e-47 |
| Msa0360510 | Msa1092990 | 0.874299 | 7.526242e-68 | -8.615850e-47 |
| Msa0362420 | Msa1092990 | 0.834924 | 2.262106e-56 | -8.615850e-47 |
| Msa0363300 | Msa1092990 | 0.839749 | 1.315663e-57 | -8.615850e-47 |
| Msa0363750 | Msa1092990 | 0.817448 | 3.279721e-52 | -8.615850e-47 |
| Msa0485030 | Msa1092990 | 0.834965 | 2.208515e-56 | -8.615850e-47 |
| Msa0485370 | Msa1092990 | 0.815252 | 1.016696e-51 | -8.615850e-47 |
| Msa0491590 | Msa1092990 | 0.888711 | 4.633299e-73 | -8.615850e-47 |
| Msa0502270 | Msa1092990 | 0.803297 | 3.727631e-49 | -8.615850e-47 |
| Msa0502760 | Msa1092990 | 0.872243 | 3.693936e-67 | -8.615850e-47 |
| Msa0503430 | Msa1092990 | 0.801490 | 8.785846e-49 | -8.615850e-47 |
| Msa0505080 | Msa1092990 | 0.847267 | 1.288736e-59 | -8.615850e-47 |
| Msa0506270 | Msa1092990 | 0.877042 | 8.625482e-69 | -8.615850e-47 |
| Msa0518540 | Msa1092990 | 0.814577 | 1.434968e-51 | -8.615850e-47 |
| Msa0534540 | Msa1092990 | 0.815929 | 7.184724e-52 | -8.615850e-47 |
| Msa0542450 | Msa1092990 | 0.810103 | 1.361447e-50 | -8.615850e-47 |
| Msa0548060 | Msa1092990 | 0.829614 | 4.664921e-55 | -8.615850e-47 |
| Msa0563300 | Msa1092990 | 0.801505 | 8.723613e-49 | -8.615850e-47 |
| Msa0564890 | Msa1092990 | 0.872606 | 2.795727e-67 | -8.615850e-47 |
| Msa0596150 | Msa1092990 | 0.865407 | 6.037765e-65 | -8.615850e-47 |
| Msa0600700 | Msa1092990 | 0.800442 | 1.438338e-48 | -8.615850e-47 |
| Msa0845930 | Msa1092990 | 0.828543 | 8.479132e-55 | -8.615850e-47 |
| Msa0846210 | Msa1092990 | 0.849096 | 4.025225e-60 | -8.615850e-47 |
| Msa0846330 | Msa1092990 | 0.913359 | 6.743562e-84 | -8.615850e-47 |
| Msa0846350 | Msa1092990 | 0.911068 | 9.239746e-83 | -8.615850e-47 |
| Msa0848960 | Msa1092990 | 0.833798 | 4.335627e-56 | -8.615850e-47 |
| Msa0849360 | Msa1092990 | 0.801538 | 8.590656e-49 | -8.615850e-47 |
| Msa0851390 | Msa1092990 | 0.828309 | 9.655432e-55 | -8.615850e-47 |
| Msa0854980 | Msa1092990 | 0.850096 | 2.117564e-60 | -8.615850e-47 |
| Msa0858980 | Msa1092990 | 0.844643 | 6.657433e-59 | -8.615850e-47 |
| Msa0865320 | Msa1092990 | 0.922959 | 4.980045e-89 | -8.615850e-47 |
| Msa0872230 | Msa1092990 | 0.854148 | 1.492637e-61 | -8.615850e-47 |
| Msa0873460 | Msa1092990 | 0.821897 | 3.162347e-53 | -8.615850e-47 |
| Msa0877250 | Msa1092990 | 0.804900 | 1.730316e-49 | -8.615850e-47 |
| Msa0883360 | Msa1092990 | 0.802202 | 6.275542e-49 | -8.615850e-47 |
| Msa0884150 | Msa1092990 | 0.812015 | 5.243736e-51 | -8.615850e-47 |
| Msa0885280 | Msa1092990 | 0.835741 | 1.406501e-56 | -8.615850e-47 |
| Msa0885290 | Msa1092990 | 0.872717 | 2.565599e-67 | -8.615850e-47 |
| Msa0886750 | Msa1092990 | 0.819385 | 1.194139e-52 | -8.615850e-47 |
| Msa0887920 | Msa1092990 | 0.813870 | 2.055944e-51 | -8.615850e-47 |
| Msa0888370 | Msa1092990 | 0.866729 | 2.304440e-65 | -8.615850e-47 |
| Msa0888420 | Msa1092990 | 0.830255 | 3.254998e-55 | -8.615850e-47 |
| Msa0889850 | Msa1092990 | 0.832731 | 7.995812e-56 | -8.615850e-47 |
| Msa0895270 | Msa1092990 | 0.811464 | 6.909280e-51 | -8.615850e-47 |
| Msa0896080 | Msa1092990 | 0.856906 | 2.343394e-62 | -8.615850e-47 |
| Msa0898080 | Msa1092990 | 0.826215 | 3.065065e-54 | -8.615850e-47 |
| Msa0898380 | Msa1092990 | 0.820067 | 8.343469e-53 | -8.615850e-47 |
| Msa0899450 | Msa1092990 | 0.808237 | 3.419048e-50 | -8.615850e-47 |
| Msa0907260 | Msa1092990 | 0.835071 | 2.076876e-56 | -8.615850e-47 |
| Msa0922720 | Msa1092990 | 0.805911 | 1.061966e-49 | -8.615850e-47 |
| Msa0952350 | Msa1092990 | 0.825688 | 4.090208e-54 | -8.615850e-47 |
| Msa0952720 | Msa1092990 | 0.806206 | 9.208063e-50 | -8.615850e-47 |
| Msa0954910 | Msa1092990 | 0.848060 | 7.793522e-60 | -8.615850e-47 |
| Msa0956270 | Msa1092990 | 0.829472 | 5.050924e-55 | -8.615850e-47 |
| Msa0957680 | Msa1092990 | 0.832303 | 1.020925e-55 | -8.615850e-47 |
| Msa0957860 | Msa1092990 | 0.877803 | 4.689043e-69 | -8.615850e-47 |
| Msa0957960 | Msa1092990 | 0.878049 | 3.845046e-69 | -8.615850e-47 |
| Msa0958550 | Msa1092990 | 0.806280 | 8.879965e-50 | -8.615850e-47 |
| Msa0974870 | Msa1092990 | 0.827781 | 1.294206e-54 | -8.615850e-47 |
| Msa0979410 | Msa1092990 | 0.826984 | 2.009742e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1092990 | MtrunA17_Chr2g0308161 | 72.131 | 61 | 12 | 1 | 60 | 115 | 19 | 79 | 1.54e-15 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACCATTTCTTGAAGTT+GGG | 0.352117 | 7_3:+11785139 | None:intergenic |
| TTTCAACCATTTCTTGAAGT+TGG | 0.356872 | 7_3:+11785138 | None:intergenic |
| CTAGTCCCAACTTCAAGAAA+TGG | 0.372385 | 7_3:-11785144 | Msa1092990:intron |
| AAGCAATTGGATGTAGAAAC+TGG | 0.389575 | 7_3:-11785272 | Msa1092990:CDS |
| ATGGGAAAGGAGTGTGTACC+AGG | 0.471236 | 7_3:-11785080 | Msa1092990:intron |
| CTTGAGGACAACATAGGTGA+TGG | 0.475620 | 7_3:-11784631 | Msa1092990:CDS |
| ACTTCAAGAAATGGTTGAAA+AGG | 0.483448 | 7_3:-11785135 | Msa1092990:CDS |
| AGGAAGTAGAGGAAAGCAAT+TGG | 0.498254 | 7_3:-11785285 | Msa1092990:CDS |
| ATGAAATTCAAGAGGATGAT+CGG | 0.537624 | 7_3:-11784558 | Msa1092990:CDS |
| GAATTTCTTGAGGACAACAT+AGG | 0.539954 | 7_3:-11784637 | Msa1092990:CDS |
| TCAAGAAATGGTTGAAAAGG+AGG | 0.541538 | 7_3:-11785132 | Msa1092990:CDS |
| TTGAGGACAACATAGGTGAT+GGG | 0.545907 | 7_3:-11784630 | Msa1092990:CDS |
| CGCATATCATGAATTTCTTG+AGG | 0.553600 | 7_3:-11784647 | Msa1092990:CDS |
| GAAACTCGACAAGGAAGTAG+AGG | 0.581711 | 7_3:-11785296 | Msa1092990:CDS |
| TATATATGATGAATTTCAAG+AGG | 0.613332 | 7_3:-11784593 | Msa1092990:CDS |
| TCTAGATGATGAAATTCAAG+AGG | 0.613572 | 7_3:-11784566 | Msa1092990:CDS |
| CATAGGTGATGGGTTTCAGA+AGG | 0.615780 | 7_3:-11784620 | Msa1092990:CDS |
| CATAGATGAGGAATTTCAAG+AGG | 0.630357 | 7_3:-11784674 | Msa1092990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTAAAAATTTAAAGTTA+CGG | - | chr7_3:11784622-11784641 | Msa1092990:CDS | 10.0% |
| !!! | TATGTAAAAATTTAAAGTTA+CGG | - | chr7_3:11784622-11784641 | Msa1092990:CDS | 10.0% |
| !! | AAATTGTGTTTAACTAATAT+AGG | - | chr7_3:11784646-11784665 | Msa1092990:CDS | 15.0% |
| !! | AAATTGTGTTTAACTAATAT+AGG | - | chr7_3:11784646-11784665 | Msa1092990:CDS | 15.0% |
| !! | AAGTTGAAGAAACTTAAAAA+TGG | - | chr7_3:11784900-11784919 | Msa1092990:intron | 20.0% |
| !! | AGTTGAAGAAACTTAAAAAT+GGG | - | chr7_3:11784901-11784920 | Msa1092990:intron | 20.0% |
| !!! | TTTTATTTTCATATGCAACA+AGG | - | chr7_3:11785094-11785113 | Msa1092990:CDS | 20.0% |
| !!! | AATTATTTTCATATGCAACA+AGG | - | chr7_3:11785136-11785155 | Msa1092990:CDS | 20.0% |
| !! | TATATATGATGAATTTCAAG+AGG | - | chr7_3:11785267-11785286 | Msa1092990:intron | 20.0% |
| !! | AAGTTGAAGAAACTTAAAAA+TGG | - | chr7_3:11784900-11784919 | Msa1092990:intron | 20.0% |
| !! | AGTTGAAGAAACTTAAAAAT+GGG | - | chr7_3:11784901-11784920 | Msa1092990:intron | 20.0% |
| !!! | TTTTATTTTCATATGCAACA+AGG | - | chr7_3:11785094-11785113 | Msa1092990:CDS | 20.0% |
| !!! | AATTATTTTCATATGCAACA+AGG | - | chr7_3:11785136-11785155 | Msa1092990:CDS | 20.0% |
| !! | TATATATGATGAATTTCAAG+AGG | - | chr7_3:11785267-11785286 | Msa1092990:intron | 20.0% |
| ! | TTGTGTTTAACTAATATAGG+CGG | - | chr7_3:11784649-11784668 | Msa1092990:CDS | 25.0% |
| ! | TTGTAATGATAGAATTAGGA+AGG | - | chr7_3:11784925-11784944 | Msa1092990:intron | 25.0% |
| ! | TGTAATGATAGAATTAGGAA+GGG | - | chr7_3:11784926-11784945 | Msa1092990:intron | 25.0% |
| ! | CTTTGAATCAACAATATCTA+CGG | - | chr7_3:11785058-11785077 | Msa1092990:intron | 25.0% |
| ! | TTGTGTTTAACTAATATAGG+CGG | - | chr7_3:11784649-11784668 | Msa1092990:CDS | 25.0% |
| ! | TTGTAATGATAGAATTAGGA+AGG | - | chr7_3:11784925-11784944 | Msa1092990:intron | 25.0% |
| ! | TGTAATGATAGAATTAGGAA+GGG | - | chr7_3:11784926-11784945 | Msa1092990:intron | 25.0% |
| ! | CTTTGAATCAACAATATCTA+CGG | - | chr7_3:11785058-11785077 | Msa1092990:intron | 25.0% |
| !!! | ATGTTTTTTGAAACTCGACA+AGG | - | chr7_3:11784555-11784574 | Msa1092990:CDS | 30.0% |
| TTCAACCATTTCTTGAAGTT+GGG | + | chr7_3:11784724-11784743 | None:intergenic | 30.0% | |
| TTTCAACCATTTCTTGAAGT+TGG | + | chr7_3:11784725-11784744 | None:intergenic | 30.0% | |
| ACTTCAAGAAATGGTTGAAA+AGG | - | chr7_3:11784725-11784744 | Msa1092990:CDS | 30.0% | |
| !!! | GAAGCTTTTAAAGCTGTTAT+GGG | - | chr7_3:11784762-11784781 | Msa1092990:intron | 30.0% |
| !!! | TTTTAAAGCTGTTATGGGAA+AGG | - | chr7_3:11784767-11784786 | Msa1092990:intron | 30.0% |
| CAAAACAAATGTTCTACTTG+CGG | - | chr7_3:11784956-11784975 | Msa1092990:intron | 30.0% | |
| !!! | ATTTGGTTTTTATTTGTGCG+AGG | - | chr7_3:11785007-11785026 | Msa1092990:intron | 30.0% |
| !! | CGTAGATATTGTTGATTCAA+AGG | + | chr7_3:11785060-11785079 | None:intergenic | 30.0% |
| TGAAAAAGATGACATAGATG+AGG | - | chr7_3:11785174-11785193 | Msa1092990:intron | 30.0% | |
| TCTAGATGATGAAATTCAAG+AGG | - | chr7_3:11785294-11785313 | Msa1092990:CDS | 30.0% | |
| ATGAAATTCAAGAGGATGAT+CGG | - | chr7_3:11785302-11785321 | Msa1092990:CDS | 30.0% | |
| !!! | ATGTTTTTTGAAACTCGACA+AGG | - | chr7_3:11784555-11784574 | Msa1092990:CDS | 30.0% |
| TTCAACCATTTCTTGAAGTT+GGG | + | chr7_3:11784724-11784743 | None:intergenic | 30.0% | |
| TTTCAACCATTTCTTGAAGT+TGG | + | chr7_3:11784725-11784744 | None:intergenic | 30.0% | |
| ACTTCAAGAAATGGTTGAAA+AGG | - | chr7_3:11784725-11784744 | Msa1092990:CDS | 30.0% | |
| !!! | GAAGCTTTTAAAGCTGTTAT+GGG | - | chr7_3:11784762-11784781 | Msa1092990:intron | 30.0% |
| !!! | TTTTAAAGCTGTTATGGGAA+AGG | - | chr7_3:11784767-11784786 | Msa1092990:intron | 30.0% |
| CAAAACAAATGTTCTACTTG+CGG | - | chr7_3:11784956-11784975 | Msa1092990:intron | 30.0% | |
| !!! | ATTTGGTTTTTATTTGTGCG+AGG | - | chr7_3:11785007-11785026 | Msa1092990:intron | 30.0% |
| !! | CGTAGATATTGTTGATTCAA+AGG | + | chr7_3:11785060-11785079 | None:intergenic | 30.0% |
| TGAAAAAGATGACATAGATG+AGG | - | chr7_3:11785174-11785193 | Msa1092990:intron | 30.0% | |
| TCTAGATGATGAAATTCAAG+AGG | - | chr7_3:11785294-11785313 | Msa1092990:CDS | 30.0% | |
| ATGAAATTCAAGAGGATGAT+CGG | - | chr7_3:11785302-11785321 | Msa1092990:CDS | 30.0% | |
| AAGCAATTGGATGTAGAAAC+TGG | - | chr7_3:11784588-11784607 | Msa1092990:CDS | 35.0% | |
| TCAAGAAATGGTTGAAAAGG+AGG | - | chr7_3:11784728-11784747 | Msa1092990:CDS | 35.0% | |
| !!! | CGAAGCTTTTAAAGCTGTTA+TGG | - | chr7_3:11784761-11784780 | Msa1092990:intron | 35.0% |
| GGGCTTGTAATGATAGAATT+AGG | - | chr7_3:11784921-11784940 | Msa1092990:intron | 35.0% | |
| !! | GCGTGTTTTACTTGTTGATT+TGG | - | chr7_3:11784990-11785009 | Msa1092990:intron | 35.0% |
| CATAGATGAGGAATTTCAAG+AGG | - | chr7_3:11785186-11785205 | Msa1092990:intron | 35.0% | |
| CGCATATCATGAATTTCTTG+AGG | - | chr7_3:11785213-11785232 | Msa1092990:intron | 35.0% | |
| GAATTTCTTGAGGACAACAT+AGG | - | chr7_3:11785223-11785242 | Msa1092990:intron | 35.0% | |
| AAGCAATTGGATGTAGAAAC+TGG | - | chr7_3:11784588-11784607 | Msa1092990:CDS | 35.0% | |
| TCAAGAAATGGTTGAAAAGG+AGG | - | chr7_3:11784728-11784747 | Msa1092990:CDS | 35.0% | |
| !!! | CGAAGCTTTTAAAGCTGTTA+TGG | - | chr7_3:11784761-11784780 | Msa1092990:intron | 35.0% |
| GGGCTTGTAATGATAGAATT+AGG | - | chr7_3:11784921-11784940 | Msa1092990:intron | 35.0% | |
| !! | GCGTGTTTTACTTGTTGATT+TGG | - | chr7_3:11784990-11785009 | Msa1092990:intron | 35.0% |
| CATAGATGAGGAATTTCAAG+AGG | - | chr7_3:11785186-11785205 | Msa1092990:intron | 35.0% | |
| CGCATATCATGAATTTCTTG+AGG | - | chr7_3:11785213-11785232 | Msa1092990:intron | 35.0% | |
| GAATTTCTTGAGGACAACAT+AGG | - | chr7_3:11785223-11785242 | Msa1092990:intron | 35.0% | |
| AGGAAGTAGAGGAAAGCAAT+TGG | - | chr7_3:11784575-11784594 | Msa1092990:CDS | 40.0% | |
| CTAGTCCCAACTTCAAGAAA+TGG | - | chr7_3:11784716-11784735 | Msa1092990:CDS | 40.0% | |
| AACACAATCAAAATCCGACC+TGG | + | chr7_3:11784801-11784820 | None:intergenic | 40.0% | |
| TTGAGGACAACATAGGTGAT+GGG | - | chr7_3:11785230-11785249 | Msa1092990:intron | 40.0% | |
| AGGAAGTAGAGGAAAGCAAT+TGG | - | chr7_3:11784575-11784594 | Msa1092990:CDS | 40.0% | |
| CTAGTCCCAACTTCAAGAAA+TGG | - | chr7_3:11784716-11784735 | Msa1092990:CDS | 40.0% | |
| AACACAATCAAAATCCGACC+TGG | + | chr7_3:11784801-11784820 | None:intergenic | 40.0% | |
| TTGAGGACAACATAGGTGAT+GGG | - | chr7_3:11785230-11785249 | Msa1092990:intron | 40.0% | |
| GAAACTCGACAAGGAAGTAG+AGG | - | chr7_3:11784564-11784583 | Msa1092990:CDS | 45.0% | |
| CTTGAGGACAACATAGGTGA+TGG | - | chr7_3:11785229-11785248 | Msa1092990:intron | 45.0% | |
| !! | CATAGGTGATGGGTTTCAGA+AGG | - | chr7_3:11785240-11785259 | Msa1092990:intron | 45.0% |
| GAAACTCGACAAGGAAGTAG+AGG | - | chr7_3:11784564-11784583 | Msa1092990:CDS | 45.0% | |
| CTTGAGGACAACATAGGTGA+TGG | - | chr7_3:11785229-11785248 | Msa1092990:intron | 45.0% | |
| !! | CATAGGTGATGGGTTTCAGA+AGG | - | chr7_3:11785240-11785259 | Msa1092990:intron | 45.0% |
| ! | ATGGGAAAGGAGTGTGTACC+AGG | - | chr7_3:11784780-11784799 | Msa1092990:intron | 50.0% |
| ! | GAAAGGAGTGTGTACCAGGT+CGG | - | chr7_3:11784784-11784803 | Msa1092990:intron | 50.0% |
| ! | ATGGGAAAGGAGTGTGTACC+AGG | - | chr7_3:11784780-11784799 | Msa1092990:intron | 50.0% |
| ! | GAAAGGAGTGTGTACCAGGT+CGG | - | chr7_3:11784784-11784803 | Msa1092990:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 11784555 | 11785327 | 11784555 | ID=Msa1092990;Name=Msa1092990 |
| chr7_3 | mRNA | 11784555 | 11785327 | 11784555 | ID=Msa1092990-mRNA-1;Parent=Msa1092990;Name=Msa1092990-mRNA-1;_AED=0.40;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|117 |
| chr7_3 | exon | 11785268 | 11785327 | 11785268 | ID=Msa1092990-mRNA-1:exon:2885;Parent=Msa1092990-mRNA-1 |
| chr7_3 | exon | 11785081 | 11785162 | 11785081 | ID=Msa1092990-mRNA-1:exon:2884;Parent=Msa1092990-mRNA-1 |
| chr7_3 | exon | 11784555 | 11784766 | 11784555 | ID=Msa1092990-mRNA-1:exon:2883;Parent=Msa1092990-mRNA-1 |
| chr7_3 | CDS | 11785268 | 11785327 | 11785268 | ID=Msa1092990-mRNA-1:cds;Parent=Msa1092990-mRNA-1 |
| chr7_3 | CDS | 11785081 | 11785162 | 11785081 | ID=Msa1092990-mRNA-1:cds;Parent=Msa1092990-mRNA-1 |
| chr7_3 | CDS | 11784555 | 11784766 | 11784555 | ID=Msa1092990-mRNA-1:cds;Parent=Msa1092990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
