Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846350 | XP_039689544.1 | 45.756 | 271 | 126 | 6 | 3 | 271 | 21 | 272 | 2.89e-72 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846350 | A0A396I0Y9 | 45.756 | 271 | 126 | 6 | 3 | 271 | 50 | 301 | 7.90e-72 | 233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0846350 | 0.818738 | 1.675495e-52 | -8.615850e-47 |
| Msa0014330 | Msa0846350 | 0.809845 | 1.546971e-50 | -8.615850e-47 |
| Msa0015750 | Msa0846350 | 0.853827 | 1.847022e-61 | -8.615850e-47 |
| Msa0016570 | Msa0846350 | 0.850544 | 1.585322e-60 | -8.615850e-47 |
| Msa0016580 | Msa0846350 | 0.847397 | 1.186599e-59 | -8.615850e-47 |
| Msa0028480 | Msa0846350 | 0.817875 | 2.628596e-52 | -8.615850e-47 |
| Msa0056530 | Msa0846350 | 0.813214 | 2.866146e-51 | -8.615850e-47 |
| Msa0071500 | Msa0846350 | 0.814187 | 1.750767e-51 | -8.615850e-47 |
| Msa0092630 | Msa0846350 | 0.805167 | 1.521632e-49 | -8.615850e-47 |
| Msa0102070 | Msa0846350 | 0.877799 | 4.702052e-69 | -8.615850e-47 |
| Msa0107580 | Msa0846350 | 0.806073 | 9.820599e-50 | -8.615850e-47 |
| Msa0110270 | Msa0846350 | 0.842629 | 2.300947e-58 | -8.615850e-47 |
| Msa0111510 | Msa0846350 | 0.832618 | 8.529064e-56 | -8.615850e-47 |
| Msa0118060 | Msa0846350 | 0.810157 | 1.325314e-50 | -8.615850e-47 |
| Msa0604350 | Msa0846350 | 0.840821 | 6.902116e-58 | -8.615850e-47 |
| Msa0636170 | Msa0846350 | 0.855982 | 4.376623e-62 | -8.615850e-47 |
| Msa0639610 | Msa0846350 | 0.867919 | 9.590702e-66 | -8.615850e-47 |
| Msa0668260 | Msa0846350 | 0.829552 | 4.829101e-55 | -8.615850e-47 |
| Msa0678930 | Msa0846350 | 0.865666 | 5.004040e-65 | -8.615850e-47 |
| Msa0694370 | Msa0846350 | 0.839588 | 1.448203e-57 | -8.615850e-47 |
| Msa0697060 | Msa0846350 | 0.819125 | 1.368290e-52 | -8.615850e-47 |
| Msa0703120 | Msa0846350 | 0.805062 | 1.599967e-49 | -8.615850e-47 |
| Msa0725850 | Msa0846350 | 0.825201 | 5.334549e-54 | -8.615850e-47 |
| Msa0726140 | Msa0846350 | 0.962295 | 1.044446e-120 | -8.615850e-47 |
| Msa0729800 | Msa0846350 | 0.891363 | 4.254689e-74 | -8.615850e-47 |
| Msa0732310 | Msa0846350 | 0.814944 | 1.190196e-51 | -8.615850e-47 |
| Msa0732710 | Msa0846350 | 0.806512 | 7.934778e-50 | -8.615850e-47 |
| Msa0733290 | Msa0846350 | 0.892128 | 2.111718e-74 | -8.615850e-47 |
| Msa0735080 | Msa0846350 | 0.811324 | 7.410198e-51 | -8.615850e-47 |
| Msa0741990 | Msa0846350 | 0.832822 | 7.588893e-56 | -8.615850e-47 |
| Msa0743810 | Msa0846350 | 0.900575 | 6.387696e-78 | -8.615850e-47 |
| Msa0745060 | Msa0846350 | 0.920113 | 1.928177e-87 | -8.615850e-47 |
| Msa0762360 | Msa0846350 | 0.810777 | 9.737749e-51 | -8.615850e-47 |
| Msa0763260 | Msa0846350 | 0.827116 | 1.868892e-54 | -8.615850e-47 |
| Msa0764960 | Msa0846350 | 0.816691 | 4.853357e-52 | -8.615850e-47 |
| Msa0766630 | Msa0846350 | 0.828665 | 7.925670e-55 | -8.615850e-47 |
| Msa0767720 | Msa0846350 | 0.835974 | 1.227782e-56 | -8.615850e-47 |
| Msa0768370 | Msa0846350 | 0.811917 | 5.506858e-51 | -8.615850e-47 |
| Msa0775300 | Msa0846350 | 0.808399 | 3.157164e-50 | -8.615850e-47 |
| Msa0777870 | Msa0846350 | 0.850338 | 1.811307e-60 | -8.615850e-47 |
| Msa0783160 | Msa0846350 | 0.895206 | 1.194314e-75 | -8.615850e-47 |
| Msa0784290 | Msa0846350 | 0.816961 | 4.221547e-52 | -8.615850e-47 |
| Msa0784300 | Msa0846350 | 0.815525 | 8.840074e-52 | -8.615850e-47 |
| Msa0787600 | Msa0846350 | 0.872718 | 2.563280e-67 | -8.615850e-47 |
| Msa0789250 | Msa0846350 | 0.821598 | 3.707754e-53 | -8.615850e-47 |
| Msa0808010 | Msa0846350 | 0.875870 | 2.190898e-68 | -8.615850e-47 |
| Msa0808020 | Msa0846350 | 0.869053 | 4.129657e-66 | -8.615850e-47 |
| Msa0811080 | Msa0846350 | 0.870666 | 1.228471e-66 | -8.615850e-47 |
| Msa0811270 | Msa0846350 | 0.847112 | 1.420837e-59 | -8.615850e-47 |
| Msa0824600 | Msa0846350 | 0.834091 | 3.661400e-56 | -8.615850e-47 |
| Msa0825860 | Msa0846350 | 0.928464 | 2.784738e-92 | -8.615850e-47 |
| Msa0826750 | Msa0846350 | 0.802171 | 6.365781e-49 | -8.615850e-47 |
| Msa0833290 | Msa0846350 | 0.835552 | 1.570013e-56 | -8.615850e-47 |
| Msa0833300 | Msa0846350 | 0.812111 | 4.995816e-51 | -8.615850e-47 |
| Msa0123810 | Msa0846350 | 0.826849 | 2.164548e-54 | -8.615850e-47 |
| Msa0124100 | Msa0846350 | 0.838243 | 3.228644e-57 | -8.615850e-47 |
| Msa0124150 | Msa0846350 | 0.821375 | 4.176068e-53 | -8.615850e-47 |
| Msa0131770 | Msa0846350 | 0.801850 | 7.410944e-49 | -8.615850e-47 |
| Msa0142220 | Msa0846350 | 0.880861 | 3.871684e-70 | -8.615850e-47 |
| Msa0145750 | Msa0846350 | 0.868607 | 5.756236e-66 | -8.615850e-47 |
| Msa0153910 | Msa0846350 | 0.841444 | 4.734048e-58 | -8.615850e-47 |
| Msa0159720 | Msa0846350 | 0.802090 | 6.617534e-49 | -8.615850e-47 |
| Msa0188460 | Msa0846350 | 0.822797 | 1.954135e-53 | -8.615850e-47 |
| Msa0192970 | Msa0846350 | 0.812314 | 4.511883e-51 | -8.615850e-47 |
| Msa0197010 | Msa0846350 | 0.808365 | 3.210582e-50 | -8.615850e-47 |
| Msa0199240 | Msa0846350 | 0.818289 | 2.118443e-52 | -8.615850e-47 |
| Msa0200000 | Msa0846350 | 0.863577 | 2.254610e-64 | -8.615850e-47 |
| Msa0227480 | Msa0846350 | 0.885834 | 5.778468e-72 | -8.615850e-47 |
| Msa0231000 | Msa0846350 | 0.814091 | 1.838434e-51 | -8.615850e-47 |
| Msa0232850 | Msa0846350 | 0.875653 | 2.600436e-68 | -8.615850e-47 |
| Msa0235140 | Msa0846350 | 0.838829 | 2.278669e-57 | -8.615850e-47 |
| Msa0365500 | Msa0846350 | 0.851019 | 1.165056e-60 | -8.615850e-47 |
| Msa0366580 | Msa0846350 | 0.840152 | 1.032821e-57 | -8.615850e-47 |
| Msa0369730 | Msa0846350 | 0.816203 | 6.242055e-52 | -8.615850e-47 |
| Msa0384800 | Msa0846350 | 0.909491 | 5.368867e-82 | -8.615850e-47 |
| Msa0384890 | Msa0846350 | 0.841488 | 4.609119e-58 | -8.615850e-47 |
| Msa0390070 | Msa0846350 | 0.820980 | 5.149389e-53 | -8.615850e-47 |
| Msa0391180 | Msa0846350 | 0.807492 | 4.922184e-50 | -8.615850e-47 |
| Msa0394970 | Msa0846350 | 0.824470 | 7.933166e-54 | -8.615850e-47 |
| Msa0396600 | Msa0846350 | 0.815632 | 8.370789e-52 | -8.615850e-47 |
| Msa0406120 | Msa0846350 | 0.870099 | 1.884684e-66 | -8.615850e-47 |
| Msa0407750 | Msa0846350 | 0.840292 | 9.492886e-58 | -8.615850e-47 |
| Msa0414410 | Msa0846350 | 0.871061 | 9.104695e-67 | -8.615850e-47 |
| Msa0414420 | Msa0846350 | 0.895463 | 9.354788e-76 | -8.615850e-47 |
| Msa0430420 | Msa0846350 | 0.812759 | 3.605984e-51 | -8.615850e-47 |
| Msa0435230 | Msa0846350 | 0.837579 | 4.782838e-57 | -8.615850e-47 |
| Msa0436780 | Msa0846350 | 0.837710 | 4.427630e-57 | -8.615850e-47 |
| Msa0436800 | Msa0846350 | 0.857186 | 1.937912e-62 | -8.615850e-47 |
| Msa0438620 | Msa0846350 | 0.858363 | 8.670207e-63 | -8.615850e-47 |
| Msa0450000 | Msa0846350 | 0.885278 | 9.331485e-72 | -8.615850e-47 |
| Msa0450570 | Msa0846350 | 0.836830 | 7.437025e-57 | -8.615850e-47 |
| Msa0451730 | Msa0846350 | 0.839216 | 1.809679e-57 | -8.615850e-47 |
| Msa0452620 | Msa0846350 | 0.808306 | 3.304917e-50 | -8.615850e-47 |
| Msa0452900 | Msa0846350 | 0.915362 | 6.442411e-85 | -8.615850e-47 |
| Msa0453120 | Msa0846350 | 0.865540 | 5.483582e-65 | -8.615850e-47 |
| Msa0454370 | Msa0846350 | 0.820935 | 5.273653e-53 | -8.615850e-47 |
| Msa0454910 | Msa0846350 | 0.846233 | 2.470133e-59 | -8.615850e-47 |
| Msa0459160 | Msa0846350 | 0.829842 | 4.106017e-55 | -8.615850e-47 |
| Msa0459170 | Msa0846350 | 0.842006 | 3.365292e-58 | -8.615850e-47 |
| Msa0479340 | Msa0846350 | 0.834585 | 2.753429e-56 | -8.615850e-47 |
| Msa0482620 | Msa0846350 | 0.830631 | 2.634014e-55 | -8.615850e-47 |
| Msa0251320 | Msa0846350 | 0.807461 | 4.996919e-50 | -8.615850e-47 |
| Msa0256440 | Msa0846350 | 0.823548 | 1.305298e-53 | -8.615850e-47 |
| Msa0267000 | Msa0846350 | 0.885203 | 9.957031e-72 | -8.615850e-47 |
| Msa0267010 | Msa0846350 | 0.890174 | 1.250132e-73 | -8.615850e-47 |
| Msa0270520 | Msa0846350 | 0.842903 | 1.945426e-58 | -8.615850e-47 |
| Msa0273100 | Msa0846350 | 0.832961 | 7.010144e-56 | -8.615850e-47 |
| Msa0282310 | Msa0846350 | 0.822491 | 2.303164e-53 | -8.615850e-47 |
| Msa0285810 | Msa0846350 | 0.807191 | 5.701292e-50 | -8.615850e-47 |
| Msa0290870 | Msa0846350 | 0.815612 | 8.457683e-52 | -8.615850e-47 |
| Msa0295770 | Msa0846350 | 0.830224 | 3.312389e-55 | -8.615850e-47 |
| Msa0304170 | Msa0846350 | 0.841005 | 6.175896e-58 | -8.615850e-47 |
| Msa0306460 | Msa0846350 | 0.853221 | 2.757729e-61 | -8.615850e-47 |
| Msa0309020 | Msa0846350 | 0.801563 | 8.489450e-49 | -8.615850e-47 |
| Msa0311750 | Msa0846350 | 0.813312 | 2.727853e-51 | -8.615850e-47 |
| Msa0313760 | Msa0846350 | 0.842271 | 2.863748e-58 | -8.615850e-47 |
| Msa0326200 | Msa0846350 | 0.802225 | 6.204846e-49 | -8.615850e-47 |
| Msa0329190 | Msa0846350 | 0.804669 | 1.933260e-49 | -8.615850e-47 |
| Msa0342240 | Msa0846350 | 0.900097 | 1.030112e-77 | -8.615850e-47 |
| Msa0349360 | Msa0846350 | 0.807146 | 5.827419e-50 | -8.615850e-47 |
| Msa0353190 | Msa0846350 | 0.800593 | 1.339785e-48 | -8.615850e-47 |
| Msa0360510 | Msa0846350 | 0.863006 | 3.387504e-64 | -8.615850e-47 |
| Msa0363300 | Msa0846350 | 0.874572 | 6.083543e-68 | -8.615850e-47 |
| Msa0363750 | Msa0846350 | 0.819696 | 1.014039e-52 | -8.615850e-47 |
| Msa0485030 | Msa0846350 | 0.832316 | 1.013384e-55 | -8.615850e-47 |
| Msa0491590 | Msa0846350 | 0.880317 | 6.065643e-70 | -8.615850e-47 |
| Msa0502270 | Msa0846350 | 0.817655 | 2.946030e-52 | -8.615850e-47 |
| Msa0502760 | Msa0846350 | 0.843492 | 1.355514e-58 | -8.615850e-47 |
| Msa0506270 | Msa0846350 | 0.852807 | 3.623156e-61 | -8.615850e-47 |
| Msa0534540 | Msa0846350 | 0.835180 | 1.949921e-56 | -8.615850e-47 |
| Msa0548060 | Msa0846350 | 0.800926 | 1.146170e-48 | -8.615850e-47 |
| Msa0564890 | Msa0846350 | 0.888163 | 7.534191e-73 | -8.615850e-47 |
| Msa0589780 | Msa0846350 | 0.823707 | 1.198434e-53 | -8.615850e-47 |
| Msa0596150 | Msa0846350 | 0.851975 | 6.252914e-61 | -8.615850e-47 |
| Msa0600700 | Msa0846350 | 0.812891 | 3.373816e-51 | -8.615850e-47 |
| Msa0845930 | Msa0846350 | 0.813535 | 2.437000e-51 | -8.615850e-47 |
| Msa0846210 | Msa0846350 | 0.831851 | 1.320751e-55 | -8.615850e-47 |
| Msa0846330 | Msa0846350 | 0.974842 | 7.121688e-139 | -8.615850e-47 |
| Msa0846350 | Msa0848060 | 0.817104 | 3.921024e-52 | -8.615850e-47 |
| Msa0846350 | Msa0848960 | 0.862759 | 4.035210e-64 | -8.615850e-47 |
| Msa0846350 | Msa0849360 | 0.801903 | 7.226952e-49 | -8.615850e-47 |
| Msa0846350 | Msa0851390 | 0.805759 | 1.142854e-49 | -8.615850e-47 |
| Msa0846350 | Msa0854980 | 0.807073 | 6.040100e-50 | -8.615850e-47 |
| Msa0846350 | Msa0858850 | 0.802695 | 4.966066e-49 | -8.615850e-47 |
| Msa0846350 | Msa0858980 | 0.866764 | 2.245432e-65 | -8.615850e-47 |
| Msa0846350 | Msa0865320 | 0.906046 | 2.254192e-80 | -8.615850e-47 |
| Msa0846350 | Msa0872230 | 0.828623 | 8.112861e-55 | -8.615850e-47 |
| Msa0846350 | Msa0884150 | 0.801555 | 8.522019e-49 | -8.615850e-47 |
| Msa0846350 | Msa0885190 | 0.809745 | 1.625230e-50 | -8.615850e-47 |
| Msa0846350 | Msa0885210 | 0.801519 | 8.668084e-49 | -8.615850e-47 |
| Msa0846350 | Msa0885280 | 0.839778 | 1.292804e-57 | -8.615850e-47 |
| Msa0846350 | Msa0885290 | 0.856155 | 3.894830e-62 | -8.615850e-47 |
| Msa0846350 | Msa0887920 | 0.819388 | 1.192211e-52 | -8.615850e-47 |
| Msa0846350 | Msa0888370 | 0.869183 | 3.746907e-66 | -8.615850e-47 |
| Msa0846350 | Msa0888420 | 0.816386 | 5.679579e-52 | -8.615850e-47 |
| Msa0846350 | Msa0889850 | 0.805113 | 1.561521e-49 | -8.615850e-47 |
| Msa0846350 | Msa0896080 | 0.837573 | 4.798926e-57 | -8.615850e-47 |
| Msa0846350 | Msa0898380 | 0.810312 | 1.227030e-50 | -8.615850e-47 |
| Msa0846350 | Msa0899430 | 0.806983 | 6.311237e-50 | -8.615850e-47 |
| Msa0846350 | Msa0899450 | 0.815353 | 9.656262e-52 | -8.615850e-47 |
| Msa0846350 | Msa0907260 | 0.830018 | 3.718305e-55 | -8.615850e-47 |
| Msa0846350 | Msa0914280 | 0.820965 | 5.191109e-53 | -8.615850e-47 |
| Msa0846350 | Msa0916680 | 0.802871 | 4.566929e-49 | -8.615850e-47 |
| Msa0846350 | Msa0922720 | 0.805238 | 1.470102e-49 | -8.615850e-47 |
| Msa0846350 | Msa0952350 | 0.854425 | 1.241503e-61 | -8.615850e-47 |
| Msa0846350 | Msa0952720 | 0.806456 | 8.156180e-50 | -8.615850e-47 |
| Msa0846350 | Msa0954020 | 0.805753 | 1.146328e-49 | -8.615850e-47 |
| Msa0846350 | Msa0954910 | 0.846479 | 2.116721e-59 | -8.615850e-47 |
| Msa0846350 | Msa0956270 | 0.821400 | 4.120640e-53 | -8.615850e-47 |
| Msa0846350 | Msa0957680 | 0.830409 | 2.984761e-55 | -8.615850e-47 |
| Msa0846350 | Msa0957860 | 0.833162 | 6.247491e-56 | -8.615850e-47 |
| Msa0846350 | Msa0957960 | 0.834204 | 3.430185e-56 | -8.615850e-47 |
| Msa0846350 | Msa0958550 | 0.812563 | 3.981749e-51 | -8.615850e-47 |
| Msa0846350 | Msa0969260 | 0.816858 | 4.451477e-52 | -8.615850e-47 |
| Msa0846350 | Msa0974870 | 0.811991 | 5.308345e-51 | -8.615850e-47 |
| Msa0846350 | Msa0979410 | 0.853244 | 2.716966e-61 | -8.615850e-47 |
| Msa0846350 | Msa0979850 | 0.802345 | 5.861845e-49 | -8.615850e-47 |
| Msa0846350 | Msa0981270 | 0.806708 | 7.213851e-50 | -8.615850e-47 |
| Msa0846350 | Msa0981370 | 0.889892 | 1.612258e-73 | -8.615850e-47 |
| Msa0846350 | Msa0986360 | 0.811952 | 5.410584e-51 | -8.615850e-47 |
| Msa0846350 | Msa0986400 | 0.808135 | 3.592838e-50 | -8.615850e-47 |
| Msa0846350 | Msa0989060 | 0.877063 | 8.481422e-69 | -8.615850e-47 |
| Msa0846350 | Msa0991820 | 0.807959 | 3.917521e-50 | -8.615850e-47 |
| Msa0846350 | Msa0998690 | 0.811336 | 7.366017e-51 | -8.615850e-47 |
| Msa0846350 | Msa1002310 | 0.804856 | 1.767329e-49 | -8.615850e-47 |
| Msa0846350 | Msa1015950 | 0.803059 | 4.176309e-49 | -8.615850e-47 |
| Msa0846350 | Msa1016280 | 0.915240 | 7.444455e-85 | -8.615850e-47 |
| Msa0846350 | Msa1023010 | 0.805667 | 1.195326e-49 | -8.615850e-47 |
| Msa0846350 | Msa1024240 | 0.861708 | 8.483558e-64 | -8.615850e-47 |
| Msa0846350 | Msa1025360 | 0.894299 | 2.809671e-75 | -8.615850e-47 |
| Msa0846350 | Msa1025370 | 0.892498 | 1.502003e-74 | -8.615850e-47 |
| Msa0846350 | Msa1030060 | 0.821293 | 4.361971e-53 | -8.615850e-47 |
| Msa0846350 | Msa1037200 | 0.823015 | 1.738625e-53 | -8.615850e-47 |
| Msa0846350 | Msa1044830 | 0.889070 | 3.364158e-73 | -8.615850e-47 |
| Msa0846350 | Msa1044840 | 0.896677 | 2.931637e-76 | -8.615850e-47 |
| Msa0846350 | Msa1054790 | 0.803315 | 3.695980e-49 | -8.615850e-47 |
| Msa0846350 | Msa1057920 | 0.803924 | 2.763213e-49 | -8.615850e-47 |
| Msa0846350 | Msa1060840 | 0.836301 | 1.013810e-56 | -8.615850e-47 |
| Msa0846350 | Msa1062810 | 0.832932 | 7.126339e-56 | -8.615850e-47 |
| Msa0846350 | Msa1065570 | 0.828409 | 9.135970e-55 | -8.615850e-47 |
| Msa0846350 | Msa1068420 | 0.808220 | 3.446939e-50 | -8.615850e-47 |
| Msa0846350 | Msa1077460 | 0.817694 | 2.887222e-52 | -8.615850e-47 |
| Msa0846350 | Msa1092990 | 0.911068 | 9.239746e-83 | -8.615850e-47 |
| Msa0846350 | Msa1096580 | 0.814443 | 1.537027e-51 | -8.615850e-47 |
| Msa0846350 | Msa1099970 | 0.807434 | 5.065490e-50 | -8.615850e-47 |
| Msa0846350 | Msa1100980 | 0.888814 | 4.225986e-73 | -8.615850e-47 |
| Msa0846350 | Msa1109440 | 0.876072 | 1.866415e-68 | -8.615850e-47 |
| Msa0846350 | Msa1112300 | 0.812258 | 4.639976e-51 | -8.615850e-47 |
| Msa0846350 | Msa1114030 | 0.819433 | 1.164436e-52 | -8.615850e-47 |
| Msa0846350 | Msa1117150 | 0.825077 | 5.707003e-54 | -8.615850e-47 |
| Msa0846350 | Msa1121200 | 0.892802 | 1.134056e-74 | -8.615850e-47 |
| Msa0846350 | Msa1121490 | 0.812763 | 3.600115e-51 | -8.615850e-47 |
| Msa0846350 | Msa1123420 | 0.811459 | 6.928466e-51 | -8.615850e-47 |
| Msa0846350 | Msa1135740 | 0.879036 | 1.728687e-69 | -8.615850e-47 |
| Msa0846350 | Msa1136090 | 0.885847 | 5.713000e-72 | -8.615850e-47 |
| Msa0846350 | Msa1137690 | 0.836754 | 7.773875e-57 | -8.615850e-47 |
| Msa0846350 | Msa1146110 | 0.880959 | 3.570002e-70 | -8.615850e-47 |
| Msa0846350 | Msa1149360 | 0.821050 | 4.961365e-53 | -8.615850e-47 |
| Msa0846350 | Msa1150370 | 0.844056 | 9.574443e-59 | -8.615850e-47 |
| Msa0846350 | Msa1160670 | 0.829670 | 4.519460e-55 | -8.615850e-47 |
| Msa0846350 | Msa1164120 | 0.815741 | 7.914414e-52 | -8.615850e-47 |
| Msa0846350 | Msa1173920 | 0.833720 | 4.534115e-56 | -8.615850e-47 |
| Msa0846350 | Msa1178340 | 0.815923 | 7.206912e-52 | -8.615850e-47 |
| Msa0846350 | Msa1182090 | 0.817498 | 3.197299e-52 | -8.615850e-47 |
| Msa0846350 | Msa1187940 | 0.885948 | 5.234235e-72 | -8.615850e-47 |
| Msa0846350 | Msa1187950 | 0.872915 | 2.202167e-67 | -8.615850e-47 |
| Msa0846350 | Msa1192640 | 0.877717 | 5.023337e-69 | -8.615850e-47 |
| Msa0846350 | Msa1193730 | 0.821542 | 3.820982e-53 | -8.615850e-47 |
| Msa0846350 | Msa1230430 | 0.811841 | 5.720284e-51 | -8.615850e-47 |
| Msa0846350 | Msa1246880 | 0.845656 | 3.543501e-59 | -8.615850e-47 |
| Msa0846350 | Msa1248310 | 0.809197 | 2.131740e-50 | -8.615850e-47 |
| Msa0846350 | Msa1251910 | 0.812130 | 4.949824e-51 | -8.615850e-47 |
| Msa0846350 | Msa1253000 | 0.810143 | 1.334610e-50 | -8.615850e-47 |
| Msa0846350 | Msa1260100 | 0.834301 | 3.245022e-56 | -8.615850e-47 |
| Msa0846350 | Msa1269670 | 0.914948 | 1.052251e-84 | -8.615850e-47 |
| Msa0846350 | Msa1270230 | 0.891050 | 5.654062e-74 | -8.615850e-47 |
| Msa0846350 | Msa1270240 | 0.881858 | 1.691389e-70 | -8.615850e-47 |
| Msa0846350 | Msa1270270 | 0.891258 | 4.682573e-74 | -8.615850e-47 |
| Msa0846350 | Msa1273230 | 0.831597 | 1.525417e-55 | -8.615850e-47 |
| Msa0846350 | Msa1283330 | 0.908117 | 2.425235e-81 | -8.615850e-47 |
| Msa0846350 | Msa1284680 | 0.822469 | 2.329898e-53 | -8.615850e-47 |
| Msa0846350 | Msa1285930 | 0.886436 | 3.425620e-72 | -8.615850e-47 |
| Msa0846350 | Msa1287800 | 0.897378 | 1.490779e-76 | -8.615850e-47 |
| Msa0846350 | Msa1287810 | 0.900346 | 8.035056e-78 | -8.615850e-47 |
| Msa0846350 | Msa1287830 | 0.828256 | 9.944769e-55 | -8.615850e-47 |
| Msa0846350 | Msa1288560 | 0.810838 | 9.447925e-51 | -8.615850e-47 |
| Msa0846350 | Msa1289420 | 0.841841 | 3.719394e-58 | -8.615850e-47 |
| Msa0846350 | Msa1289430 | 0.863373 | 2.607384e-64 | -8.615850e-47 |
| Msa0846350 | Msa1297210 | 0.864834 | 9.142811e-65 | -8.615850e-47 |
| Msa0846350 | Msa1305480 | 0.837637 | 4.622675e-57 | -8.615850e-47 |
| Msa0846350 | Msa1307890 | 0.843233 | 1.589092e-58 | -8.615850e-47 |
| Msa0846350 | Msa1310120 | 0.804261 | 2.351257e-49 | -8.615850e-47 |
| Msa0846350 | Msa1313980 | 0.823362 | 1.442705e-53 | -8.615850e-47 |
| Msa0846350 | Msa1314280 | 0.809647 | 1.706604e-50 | -8.615850e-47 |
| Msa0846350 | Msa1320300 | 0.888142 | 7.671521e-73 | -8.615850e-47 |
| Msa0846350 | Msa1321560 | 0.841478 | 4.636681e-58 | -8.615850e-47 |
| Msa0846350 | Msa1340590 | 0.887314 | 1.591208e-72 | -8.615850e-47 |
| Msa0846350 | Msa1342200 | 0.840623 | 7.778573e-58 | -8.615850e-47 |
| Msa0846350 | Msa1345660 | 0.804702 | 1.902559e-49 | -8.615850e-47 |
| Msa0846350 | Msa1369430 | 0.852256 | 5.201809e-61 | -8.615850e-47 |
| Msa0846350 | Msa1381530 | 0.800089 | 1.697205e-48 | -8.615850e-47 |
| Msa0846350 | Msa1382690 | 0.816824 | 4.531151e-52 | -8.615850e-47 |
| Msa0846350 | Msa1382700 | 0.816963 | 4.216989e-52 | -8.615850e-47 |
| Msa0846350 | Msa1386330 | 0.830394 | 3.010084e-55 | -8.615850e-47 |
| Msa0846350 | Msa1397150 | 0.803837 | 2.881389e-49 | -8.615850e-47 |
| Msa0846350 | Msa1397580 | 0.882451 | 1.030251e-70 | -8.615850e-47 |
| Msa0846350 | Msa1402790 | 0.840453 | 8.615172e-58 | -8.615850e-47 |
| Msa0846350 | Msa1404000 | 0.940015 | 4.799719e-100 | -8.615850e-47 |
| Msa0846350 | Msa1408780 | 0.825167 | 5.433273e-54 | -8.615850e-47 |
| Msa0846350 | Msa1415310 | 0.880153 | 6.939863e-70 | -8.615850e-47 |
| Msa0846350 | Msa1422180 | 0.883724 | 3.522387e-71 | -8.615850e-47 |
| Msa0846350 | Msa1433120 | 0.891495 | 3.769216e-74 | -8.615850e-47 |
| Msa0846350 | Msa1451570 | 0.810134 | 1.340632e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846350 | MtrunA17_Chr4g0002051 | 45.756 | 271 | 126 | 6 | 3 | 271 | 50 | 301 | 1.52e-75 | 233 |
| Msa0846350 | MtrunA17_Chr8g0381471 | 47.059 | 170 | 75 | 4 | 104 | 271 | 1 | 157 | 2.20e-45 | 151 |
| Msa0846350 | MtrunA17_Chr2g0287671 | 30.389 | 283 | 166 | 11 | 3 | 265 | 137 | 408 | 2.04e-25 | 104 |
| Msa0846350 | MtrunA17_Chr8g0361701 | 28.313 | 166 | 90 | 6 | 93 | 253 | 111 | 252 | 1.96e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGGCAGTTTACATATT+TGG | 0.149377 | 5_4:-26251061 | Msa0846350:CDS |
| GGGTTATCGAAAGCGATTTA+TGG | 0.217435 | 5_4:-26250487 | Msa0846350:CDS |
| AACCAATATTTAGGATAAAA+TGG | 0.269706 | 5_4:+26250657 | None:intergenic |
| GGTGGTTTCAAATCAACTTA+TGG | 0.292463 | 5_4:-26250071 | Msa0846350:CDS |
| ATTGTTTCAGGTAATTGATT+TGG | 0.299049 | 5_4:-26250718 | Msa0846350:intron |
| TAGGAATGATTGTGCGATTT+GGG | 0.304560 | 5_4:-26249879 | Msa0846350:CDS |
| TTTCATGGAAAACTTGTTGA+TGG | 0.314872 | 5_4:-26250111 | Msa0846350:CDS |
| ATCAAATGGATGATGGAAAA+AGG | 0.314997 | 5_4:-26249854 | Msa0846350:CDS |
| GTCGGAATAAACCAATATTT+AGG | 0.320561 | 5_4:+26250648 | None:intergenic |
| CTTGATACTTGTCTTCCTCT+TGG | 0.328648 | 5_4:+26250231 | None:intergenic |
| TTAGGAATGATTGTGCGATT+TGG | 0.345924 | 5_4:-26249880 | Msa0846350:intron |
| GAAGACAAGTATCAAGAAAA+TGG | 0.346177 | 5_4:-26250224 | Msa0846350:intron |
| GGTTATCGAAAGCGATTTAT+GGG | 0.356200 | 5_4:-26250486 | Msa0846350:CDS |
| TGACATCGGCAGAAAGGAAT+TGG | 0.366356 | 5_4:-26250290 | Msa0846350:CDS |
| TTGATACTTGTCTTCCTCTT+GGG | 0.380492 | 5_4:+26250232 | None:intergenic |
| GGATTTGATCTTGCGGAATT+CGG | 0.384621 | 5_4:-26249655 | None:intergenic |
| ATCATCGTCAATAAATTTGT+TGG | 0.391722 | 5_4:+26250827 | None:intergenic |
| GTTTATTCCGACCACATTAT+CGG | 0.391757 | 5_4:-26250637 | Msa0846350:intron |
| TCATCGTCAATAAATTTGTT+GGG | 0.434932 | 5_4:+26250828 | None:intergenic |
| AAATGATGAAGAATCTAATC+TGG | 0.436512 | 5_4:-26251077 | Msa0846350:CDS |
| TTAGCAACTCGTGTTGGCAT+TGG | 0.451963 | 5_4:-26250535 | Msa0846350:intron |
| GTGCGATTTGGGTAATCAAA+TGG | 0.465432 | 5_4:-26249868 | Msa0846350:CDS |
| ACAGAGATAGATTACGTTGA+AGG | 0.486255 | 5_4:-26250879 | Msa0846350:CDS |
| ATGGATCCCTCTTTCTATGT+GGG | 0.495254 | 5_4:-26250092 | Msa0846350:CDS |
| TTTGTTGCTCCACGTGGTTA+CGG | 0.500598 | 5_4:-26250026 | Msa0846350:CDS |
| GATGGATCCCTCTTTCTATG+TGG | 0.506410 | 5_4:-26250093 | Msa0846350:CDS |
| AGGAACTAGGAAGTTGCTGC+AGG | 0.508385 | 5_4:-26250859 | Msa0846350:CDS |
| TTGGGTAATCAAATGGATGA+TGG | 0.515751 | 5_4:-26249861 | Msa0846350:CDS |
| CATAATTGACATCGGCAGAA+AGG | 0.522205 | 5_4:-26250296 | Msa0846350:CDS |
| GATCCCTCTTTCTATGTGGG+TGG | 0.525374 | 5_4:-26250089 | Msa0846350:CDS |
| GAAACCACCCACATAGAAAG+AGG | 0.536877 | 5_4:+26250085 | None:intergenic |
| TAGATTACGTTGAAGGAACT+AGG | 0.550308 | 5_4:-26250872 | Msa0846350:CDS |
| GAGTGCTGAGTTTATTTCAA+AGG | 0.557552 | 5_4:-26250460 | Msa0846350:CDS |
| TCTTAATTGTTGTAGGCAAG+AGG | 0.559172 | 5_4:-26250913 | Msa0846350:intron |
| TTACACTAACAGGTGGATGA+AGG | 0.560129 | 5_4:-26249732 | Msa0846350:intron |
| CCACGTGGTTACGGAAGTCA+AGG | 0.569221 | 5_4:-26250017 | Msa0846350:CDS |
| ATCGAAAGCGATTTATGGGG+GGG | 0.572674 | 5_4:-26250482 | Msa0846350:CDS |
| TGCCGATGTCAATTATGAGA+AGG | 0.572917 | 5_4:+26250302 | None:intergenic |
| AAATGAACGGTATCATGTAT+CGG | 0.587109 | 5_4:+26250328 | None:intergenic |
| TTAATAATTTACCGATAATG+TGG | 0.589365 | 5_4:+26250626 | None:intergenic |
| ATTTATTTAGCAACTCGTGT+TGG | 0.592550 | 5_4:-26250541 | Msa0846350:intron |
| TTATCGAAAGCGATTTATGG+GGG | 0.592691 | 5_4:-26250484 | Msa0846350:CDS |
| TAATTTACCGATAATGTGGT+CGG | 0.599623 | 5_4:+26250630 | None:intergenic |
| TTCCTTCTCATAATTGACAT+CGG | 0.605577 | 5_4:-26250304 | Msa0846350:CDS |
| TATCGAAAGCGATTTATGGG+GGG | 0.620517 | 5_4:-26250483 | Msa0846350:CDS |
| AAAAGAGGGATTTGATCTTG+CGG | 0.622365 | 5_4:-26249662 | Msa0846350:CDS |
| GGAACTAGGAAGTTGCTGCA+GGG | 0.630697 | 5_4:-26250858 | Msa0846350:CDS |
| GTTATCGAAAGCGATTTATG+GGG | 0.643499 | 5_4:-26250485 | Msa0846350:CDS |
| TTCATCATTTAACTTCAGTG+TGG | 0.647375 | 5_4:+26251090 | None:intergenic |
| TTTAAGTTTGTTGCTCCACG+TGG | 0.650344 | 5_4:-26250032 | Msa0846350:CDS |
| GTTCGTCAGCTCTTCCCAAG+AGG | 0.652918 | 5_4:-26250246 | Msa0846350:CDS |
| AAACCACCCACATAGAAAGA+GGG | 0.662397 | 5_4:+26250086 | None:intergenic |
| TATGAGAAGGAACAAATGAA+CGG | 0.662634 | 5_4:+26250315 | None:intergenic |
| CCTTGACTTCCGTAACCACG+TGG | 0.696038 | 5_4:+26250017 | None:intergenic |
| CACGTGGTTACGGAAGTCAA+GGG | 0.703622 | 5_4:-26250016 | Msa0846350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTCATAATTTTTTATTT+AGG | - | chr5_4:26250892-26250911 | Msa0846350:CDS | 10.0% |
| !!! | ATACTCATAATTTTTTATTT+AGG | - | chr5_4:26250892-26250911 | Msa0846350:CDS | 10.0% |
| !! | TAATTAATCTTAATTGTTGT+AGG | - | chr5_4:26249870-26249889 | Msa0846350:CDS | 15.0% |
| !! | TAATTAATCTTAATTGTTGT+AGG | - | chr5_4:26249870-26249889 | Msa0846350:CDS | 15.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | - | chr5_4:26250060-26250079 | Msa0846350:CDS | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | + | chr5_4:26250136-26250155 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | + | chr5_4:26250167-26250186 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | + | chr5_4:26250800-26250819 | None:intergenic | 20.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | - | chr5_4:26250060-26250079 | Msa0846350:CDS | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | + | chr5_4:26250136-26250155 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | + | chr5_4:26250167-26250186 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | + | chr5_4:26250800-26250819 | None:intergenic | 20.0% |
| ! | AAATGATGAAGAATCTAATC+TGG | - | chr5_4:26249713-26249732 | Msa0846350:CDS | 25.0% |
| !!! | CAGCTTTTTGATTATATTGA+TGG | + | chr5_4:26249755-26249774 | None:intergenic | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | + | chr5_4:26249965-26249984 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | + | chr5_4:26249966-26249985 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | - | chr5_4:26250072-26250091 | Msa0846350:CDS | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | - | chr5_4:26250131-26250150 | Msa0846350:intron | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | - | chr5_4:26250282-26250301 | Msa0846350:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | - | chr5_4:26250283-26250302 | Msa0846350:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | + | chr5_4:26250389-26250408 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | + | chr5_4:26250390-26250409 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | - | chr5_4:26250664-26250683 | Msa0846350:CDS | 25.0% |
| !! | AAATCCCTCTTTTTATTGTA+AGG | + | chr5_4:26251121-26251140 | None:intergenic | 25.0% |
| ! | AAATGATGAAGAATCTAATC+TGG | - | chr5_4:26249713-26249732 | Msa0846350:CDS | 25.0% |
| !!! | CAGCTTTTTGATTATATTGA+TGG | + | chr5_4:26249755-26249774 | None:intergenic | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | + | chr5_4:26249965-26249984 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | + | chr5_4:26249966-26249985 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | - | chr5_4:26250072-26250091 | Msa0846350:CDS | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | - | chr5_4:26250131-26250150 | Msa0846350:intron | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | - | chr5_4:26250282-26250301 | Msa0846350:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | - | chr5_4:26250283-26250302 | Msa0846350:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | + | chr5_4:26250389-26250408 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | + | chr5_4:26250390-26250409 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | - | chr5_4:26250664-26250683 | Msa0846350:CDS | 25.0% |
| !! | AAATCCCTCTTTTTATTGTA+AGG | + | chr5_4:26251121-26251140 | None:intergenic | 25.0% |
| !! | TTTAACTTCAGTGTGGTTTT+AGG | + | chr5_4:26249696-26249715 | None:intergenic | 30.0% |
| ! | TTCATCATTTAACTTCAGTG+TGG | + | chr5_4:26249703-26249722 | None:intergenic | 30.0% |
| AATCTGGCAGTTTACATATT+TGG | - | chr5_4:26249729-26249748 | Msa0846350:intron | 30.0% | |
| GTCGGAATAAACCAATATTT+AGG | + | chr5_4:26250145-26250164 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | + | chr5_4:26250163-26250182 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | - | chr5_4:26250249-26250268 | Msa0846350:CDS | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | + | chr5_4:26250286-26250305 | None:intergenic | 30.0% |
| TCGGCACAAAAAAAATGTAT+CGG | + | chr5_4:26250446-26250465 | None:intergenic | 30.0% | |
| AAATGAACGGTATCATGTAT+CGG | + | chr5_4:26250465-26250484 | None:intergenic | 30.0% | |
| TATGAGAAGGAACAAATGAA+CGG | + | chr5_4:26250478-26250497 | None:intergenic | 30.0% | |
| TTCCTTCTCATAATTGACAT+CGG | - | chr5_4:26250486-26250505 | Msa0846350:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | - | chr5_4:26250566-26250585 | Msa0846350:intron | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | - | chr5_4:26250679-26250698 | Msa0846350:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | - | chr5_4:26250936-26250955 | Msa0846350:intron | 30.0% |
| TTTACCACAATTACACTAAC+AGG | - | chr5_4:26251048-26251067 | Msa0846350:CDS | 30.0% | |
| TGCATCCTTACAATAAAAAG+AGG | - | chr5_4:26251113-26251132 | Msa0846350:CDS | 30.0% | |
| GCATCCTTACAATAAAAAGA+GGG | - | chr5_4:26251114-26251133 | Msa0846350:CDS | 30.0% | |
| !! | TTTAACTTCAGTGTGGTTTT+AGG | + | chr5_4:26249696-26249715 | None:intergenic | 30.0% |
| ! | TTCATCATTTAACTTCAGTG+TGG | + | chr5_4:26249703-26249722 | None:intergenic | 30.0% |
| AATCTGGCAGTTTACATATT+TGG | - | chr5_4:26249729-26249748 | Msa0846350:intron | 30.0% | |
| GTCGGAATAAACCAATATTT+AGG | + | chr5_4:26250145-26250164 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | + | chr5_4:26250163-26250182 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | - | chr5_4:26250249-26250268 | Msa0846350:CDS | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | + | chr5_4:26250286-26250305 | None:intergenic | 30.0% |
| TCGGCACAAAAAAAATGTAT+CGG | + | chr5_4:26250446-26250465 | None:intergenic | 30.0% | |
| AAATGAACGGTATCATGTAT+CGG | + | chr5_4:26250465-26250484 | None:intergenic | 30.0% | |
| TATGAGAAGGAACAAATGAA+CGG | + | chr5_4:26250478-26250497 | None:intergenic | 30.0% | |
| TTCCTTCTCATAATTGACAT+CGG | - | chr5_4:26250486-26250505 | Msa0846350:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | - | chr5_4:26250566-26250585 | Msa0846350:intron | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | - | chr5_4:26250679-26250698 | Msa0846350:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | - | chr5_4:26250936-26250955 | Msa0846350:intron | 30.0% |
| TTTACCACAATTACACTAAC+AGG | - | chr5_4:26251048-26251067 | Msa0846350:CDS | 30.0% | |
| TGCATCCTTACAATAAAAAG+AGG | - | chr5_4:26251113-26251132 | Msa0846350:CDS | 30.0% | |
| GCATCCTTACAATAAAAAGA+GGG | - | chr5_4:26251114-26251133 | Msa0846350:CDS | 30.0% | |
| TCTTAATTGTTGTAGGCAAG+AGG | - | chr5_4:26249877-26249896 | Msa0846350:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | - | chr5_4:26249911-26249930 | Msa0846350:intron | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | - | chr5_4:26249918-26249937 | Msa0846350:intron | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | - | chr5_4:26250153-26250172 | Msa0846350:intron | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | - | chr5_4:26250304-26250323 | Msa0846350:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | - | chr5_4:26250305-26250324 | Msa0846350:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | - | chr5_4:26250306-26250325 | Msa0846350:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | - | chr5_4:26250330-26250349 | Msa0846350:CDS | 35.0% |
| TTGATACTTGTCTTCCTCTT+GGG | + | chr5_4:26250561-26250580 | None:intergenic | 35.0% | |
| GGTGGTTTCAAATCAACTTA+TGG | - | chr5_4:26250719-26250738 | Msa0846350:intron | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | - | chr5_4:26250910-26250929 | Msa0846350:intron | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | - | chr5_4:26250911-26250930 | Msa0846350:intron | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | - | chr5_4:26250929-26250948 | Msa0846350:intron | 35.0% | |
| AAAAGAGGGATTTGATCTTG+CGG | - | chr5_4:26251128-26251147 | Msa0846350:intron | 35.0% | |
| TCTTAATTGTTGTAGGCAAG+AGG | - | chr5_4:26249877-26249896 | Msa0846350:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | - | chr5_4:26249911-26249930 | Msa0846350:intron | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | - | chr5_4:26249918-26249937 | Msa0846350:intron | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | - | chr5_4:26250153-26250172 | Msa0846350:intron | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | - | chr5_4:26250304-26250323 | Msa0846350:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | - | chr5_4:26250305-26250324 | Msa0846350:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | - | chr5_4:26250306-26250325 | Msa0846350:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | - | chr5_4:26250330-26250349 | Msa0846350:CDS | 35.0% |
| TTGATACTTGTCTTCCTCTT+GGG | + | chr5_4:26250561-26250580 | None:intergenic | 35.0% | |
| GGTGGTTTCAAATCAACTTA+TGG | - | chr5_4:26250719-26250738 | Msa0846350:intron | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | - | chr5_4:26250910-26250929 | Msa0846350:intron | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | - | chr5_4:26250911-26250930 | Msa0846350:intron | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | - | chr5_4:26250929-26250948 | Msa0846350:intron | 35.0% | |
| AAAAGAGGGATTTGATCTTG+CGG | - | chr5_4:26251128-26251147 | Msa0846350:intron | 35.0% | |
| !! | GTTGACTTTTGATGAGAGTC+TGG | - | chr5_4:26250105-26250124 | Msa0846350:CDS | 40.0% |
| GGGTTATCGAAAGCGATTTA+TGG | - | chr5_4:26250303-26250322 | Msa0846350:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | - | chr5_4:26250307-26250326 | Msa0846350:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | + | chr5_4:26250491-26250510 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | - | chr5_4:26250494-26250513 | Msa0846350:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | + | chr5_4:26250562-26250581 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | - | chr5_4:26250698-26250717 | Msa0846350:CDS | 40.0% | |
| AAACCACCCACATAGAAAGA+GGG | + | chr5_4:26250707-26250726 | None:intergenic | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | - | chr5_4:26250758-26250777 | Msa0846350:intron | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | - | chr5_4:26250922-26250941 | Msa0846350:intron | 40.0% |
| ACCACAATTACACTAACAGG+TGG | - | chr5_4:26251051-26251070 | Msa0846350:CDS | 40.0% | |
| TCCACCTGTTAGTGTAATTG+TGG | + | chr5_4:26251055-26251074 | None:intergenic | 40.0% | |
| TTACACTAACAGGTGGATGA+AGG | - | chr5_4:26251058-26251077 | Msa0846350:CDS | 40.0% | |
| !! | GTTGACTTTTGATGAGAGTC+TGG | - | chr5_4:26250105-26250124 | Msa0846350:CDS | 40.0% |
| GGGTTATCGAAAGCGATTTA+TGG | - | chr5_4:26250303-26250322 | Msa0846350:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | - | chr5_4:26250307-26250326 | Msa0846350:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | + | chr5_4:26250491-26250510 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | - | chr5_4:26250494-26250513 | Msa0846350:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | + | chr5_4:26250562-26250581 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | - | chr5_4:26250698-26250717 | Msa0846350:CDS | 40.0% | |
| AAACCACCCACATAGAAAGA+GGG | + | chr5_4:26250707-26250726 | None:intergenic | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | - | chr5_4:26250758-26250777 | Msa0846350:intron | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | - | chr5_4:26250922-26250941 | Msa0846350:intron | 40.0% |
| ACCACAATTACACTAACAGG+TGG | - | chr5_4:26251051-26251070 | Msa0846350:CDS | 40.0% | |
| TCCACCTGTTAGTGTAATTG+TGG | + | chr5_4:26251055-26251074 | None:intergenic | 40.0% | |
| TTACACTAACAGGTGGATGA+AGG | - | chr5_4:26251058-26251077 | Msa0846350:CDS | 40.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | - | chr5_4:26250255-26250274 | Msa0846350:CDS | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | - | chr5_4:26250308-26250327 | Msa0846350:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | - | chr5_4:26250500-26250519 | Msa0846350:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | - | chr5_4:26250697-26250716 | Msa0846350:CDS | 45.0% | |
| GAAACCACCCACATAGAAAG+AGG | + | chr5_4:26250708-26250727 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | - | chr5_4:26250764-26250783 | Msa0846350:intron | 45.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | - | chr5_4:26250255-26250274 | Msa0846350:CDS | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | - | chr5_4:26250308-26250327 | Msa0846350:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | - | chr5_4:26250500-26250519 | Msa0846350:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | - | chr5_4:26250697-26250716 | Msa0846350:CDS | 45.0% | |
| GAAACCACCCACATAGAAAG+AGG | + | chr5_4:26250708-26250727 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | - | chr5_4:26250764-26250783 | Msa0846350:intron | 45.0% | |
| !!! | TAAATATTATCTTATTTTAT+AGG | - | chr5_4:26249830-26249849 | Msa0846350:intron | 5.0% |
| !!! | TAAATATTATCTTATTTTAT+AGG | - | chr5_4:26249830-26249849 | Msa0846350:intron | 5.0% |
| AGGAACTAGGAAGTTGCTGC+AGG | - | chr5_4:26249931-26249950 | Msa0846350:intron | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | - | chr5_4:26249932-26249951 | Msa0846350:intron | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | - | chr5_4:26250701-26250720 | Msa0846350:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | - | chr5_4:26250774-26250793 | Msa0846350:intron | 50.0% | |
| AGGAACTAGGAAGTTGCTGC+AGG | - | chr5_4:26249931-26249950 | Msa0846350:intron | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | - | chr5_4:26249932-26249951 | Msa0846350:intron | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | - | chr5_4:26250701-26250720 | Msa0846350:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | - | chr5_4:26250774-26250793 | Msa0846350:intron | 50.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | - | chr5_4:26250544-26250563 | Msa0846350:intron | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | + | chr5_4:26250776-26250795 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | - | chr5_4:26250773-26250792 | Msa0846350:intron | 55.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | - | chr5_4:26250544-26250563 | Msa0846350:intron | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | + | chr5_4:26250776-26250795 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | - | chr5_4:26250773-26250792 | Msa0846350:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 26249656 | 26251156 | 26249656 | ID=Msa0846350;Name=Msa0846350 |
| chr5_4 | mRNA | 26249656 | 26251156 | 26249656 | ID=Msa0846350-mRNA-1;Parent=Msa0846350;Name=Msa0846350-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|0.44|0.75|0.66|9|0|281 |
| chr5_4 | exon | 26251151 | 26251156 | 26251151 | ID=Msa0846350-mRNA-1:exon:10315;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26251034 | 26251140 | 26251034 | ID=Msa0846350-mRNA-1:exon:10314;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26250827 | 26250920 | 26250827 | ID=Msa0846350-mRNA-1:exon:10313;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26250638 | 26250730 | 26250638 | ID=Msa0846350-mRNA-1:exon:10312;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26250450 | 26250553 | 26250450 | ID=Msa0846350-mRNA-1:exon:10311;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26250225 | 26250378 | 26250225 | ID=Msa0846350-mRNA-1:exon:10310;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26250008 | 26250138 | 26250008 | ID=Msa0846350-mRNA-1:exon:10309;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26249832 | 26249898 | 26249832 | ID=Msa0846350-mRNA-1:exon:10308;Parent=Msa0846350-mRNA-1 |
| chr5_4 | exon | 26249656 | 26249742 | 26249656 | ID=Msa0846350-mRNA-1:exon:10307;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26251151 | 26251156 | 26251151 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26251034 | 26251140 | 26251034 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26250827 | 26250920 | 26250827 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26250638 | 26250730 | 26250638 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26250450 | 26250553 | 26250450 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26250225 | 26250378 | 26250225 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26250008 | 26250138 | 26250008 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26249832 | 26249898 | 26249832 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| chr5_4 | CDS | 26249656 | 26249742 | 26249656 | ID=Msa0846350-mRNA-1:cds;Parent=Msa0846350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
