Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384800 | XP_039689544.1 | 51.707 | 205 | 91 | 4 | 18 | 220 | 54 | 252 | 6.34e-62 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384800 | A0A396I0Y9 | 51.707 | 205 | 91 | 4 | 18 | 220 | 83 | 281 | 1.82e-61 | 204 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0384800 | 0.810931 | 9.018592e-51 | -8.615850e-47 |
| Msa0014330 | Msa0384800 | 0.842489 | 2.507139e-58 | -8.615850e-47 |
| Msa0015750 | Msa0384800 | 0.851871 | 6.692490e-61 | -8.615850e-47 |
| Msa0016570 | Msa0384800 | 0.856110 | 4.015706e-62 | -8.615850e-47 |
| Msa0016580 | Msa0384800 | 0.828558 | 8.409895e-55 | -8.615850e-47 |
| Msa0028480 | Msa0384800 | 0.811289 | 7.541836e-51 | -8.615850e-47 |
| Msa0102070 | Msa0384800 | 0.867727 | 1.105837e-65 | -8.615850e-47 |
| Msa0107580 | Msa0384800 | 0.813129 | 2.992797e-51 | -8.615850e-47 |
| Msa0110270 | Msa0384800 | 0.816265 | 6.044896e-52 | -8.615850e-47 |
| Msa0111510 | Msa0384800 | 0.844570 | 6.965414e-59 | -8.615850e-47 |
| Msa0123810 | Msa0384800 | 0.849479 | 3.150594e-60 | -8.615850e-47 |
| Msa0124100 | Msa0384800 | 0.819015 | 1.449683e-52 | -8.615850e-47 |
| Msa0124150 | Msa0384800 | 0.801289 | 9.660557e-49 | -8.615850e-47 |
| Msa0142220 | Msa0384800 | 0.858561 | 7.570745e-63 | -8.615850e-47 |
| Msa0145750 | Msa0384800 | 0.868590 | 5.830505e-66 | -8.615850e-47 |
| Msa0153910 | Msa0384800 | 0.846535 | 2.043569e-59 | -8.615850e-47 |
| Msa0165190 | Msa0384800 | 0.800577 | 1.350076e-48 | -8.615850e-47 |
| Msa0188460 | Msa0384800 | 0.818551 | 1.847520e-52 | -8.615850e-47 |
| Msa0192970 | Msa0384800 | 0.843987 | 9.992476e-59 | -8.615850e-47 |
| Msa0200000 | Msa0384800 | 0.843368 | 1.462783e-58 | -8.615850e-47 |
| Msa0227480 | Msa0384800 | 0.862689 | 4.241694e-64 | -8.615850e-47 |
| Msa0231000 | Msa0384800 | 0.850950 | 1.218838e-60 | -8.615850e-47 |
| Msa0232850 | Msa0384800 | 0.864724 | 9.899066e-65 | -8.615850e-47 |
| Msa0233300 | Msa0384800 | 0.807555 | 4.773154e-50 | -8.615850e-47 |
| Msa0235140 | Msa0384800 | 0.882816 | 7.583229e-71 | -8.615850e-47 |
| Msa0365500 | Msa0384800 | 0.843762 | 1.147737e-58 | -8.615850e-47 |
| Msa0366580 | Msa0384800 | 0.844835 | 5.910954e-59 | -8.615850e-47 |
| Msa0384800 | Msa0384890 | 0.812285 | 4.579169e-51 | -8.615850e-47 |
| Msa0384800 | Msa0391180 | 0.816130 | 6.481813e-52 | -8.615850e-47 |
| Msa0384800 | Msa0394970 | 0.816164 | 6.368960e-52 | -8.615850e-47 |
| Msa0384800 | Msa0402290 | 0.804823 | 1.795083e-49 | -8.615850e-47 |
| Msa0384800 | Msa0406120 | 0.866012 | 3.889782e-65 | -8.615850e-47 |
| Msa0384800 | Msa0407750 | 0.808179 | 3.517784e-50 | -8.615850e-47 |
| Msa0384800 | Msa0414410 | 0.866024 | 3.857180e-65 | -8.615850e-47 |
| Msa0384800 | Msa0414420 | 0.889395 | 2.516375e-73 | -8.615850e-47 |
| Msa0384800 | Msa0417080 | 0.800584 | 1.345493e-48 | -8.615850e-47 |
| Msa0384800 | Msa0423020 | 0.830439 | 2.935722e-55 | -8.615850e-47 |
| Msa0384800 | Msa0429880 | 0.805902 | 1.066888e-49 | -8.615850e-47 |
| Msa0384800 | Msa0431690 | 0.805084 | 1.583708e-49 | -8.615850e-47 |
| Msa0384800 | Msa0435230 | 0.843553 | 1.305829e-58 | -8.615850e-47 |
| Msa0384800 | Msa0436780 | 0.838259 | 3.197988e-57 | -8.615850e-47 |
| Msa0384800 | Msa0436800 | 0.826807 | 2.215647e-54 | -8.615850e-47 |
| Msa0384800 | Msa0437990 | 0.805117 | 1.558735e-49 | -8.615850e-47 |
| Msa0384800 | Msa0438620 | 0.861937 | 7.221377e-64 | -8.615850e-47 |
| Msa0384800 | Msa0444130 | 0.820243 | 7.601518e-53 | -8.615850e-47 |
| Msa0384800 | Msa0450000 | 0.855266 | 7.079947e-62 | -8.615850e-47 |
| Msa0384800 | Msa0450570 | 0.827752 | 1.314846e-54 | -8.615850e-47 |
| Msa0384800 | Msa0451730 | 0.845475 | 3.967644e-59 | -8.615850e-47 |
| Msa0384800 | Msa0452620 | 0.814305 | 1.648162e-51 | -8.615850e-47 |
| Msa0384800 | Msa0452900 | 0.906181 | 1.950800e-80 | -8.615850e-47 |
| Msa0384800 | Msa0453120 | 0.854496 | 1.184493e-61 | -8.615850e-47 |
| Msa0384800 | Msa0454370 | 0.817040 | 4.052758e-52 | -8.615850e-47 |
| Msa0384800 | Msa0454910 | 0.875098 | 4.026702e-68 | -8.615850e-47 |
| Msa0384800 | Msa0459160 | 0.825254 | 5.183085e-54 | -8.615850e-47 |
| Msa0384800 | Msa0459170 | 0.871742 | 5.419842e-67 | -8.615850e-47 |
| Msa0384800 | Msa0479340 | 0.825076 | 5.707523e-54 | -8.615850e-47 |
| Msa0384800 | Msa0482620 | 0.804936 | 1.700608e-49 | -8.615850e-47 |
| Msa0384800 | Msa0485030 | 0.816377 | 5.706314e-52 | -8.615850e-47 |
| Msa0384800 | Msa0491590 | 0.847055 | 1.472900e-59 | -8.615850e-47 |
| Msa0384800 | Msa0502270 | 0.811216 | 7.820626e-51 | -8.615850e-47 |
| Msa0384800 | Msa0502760 | 0.860203 | 2.432062e-63 | -8.615850e-47 |
| Msa0384800 | Msa0506270 | 0.847229 | 1.320116e-59 | -8.615850e-47 |
| Msa0384800 | Msa0518540 | 0.803770 | 2.975109e-49 | -8.615850e-47 |
| Msa0384800 | Msa0534540 | 0.813334 | 2.697735e-51 | -8.615850e-47 |
| Msa0384800 | Msa0548060 | 0.809184 | 2.145378e-50 | -8.615850e-47 |
| Msa0384800 | Msa0564890 | 0.884327 | 2.108930e-71 | -8.615850e-47 |
| Msa0384800 | Msa0590780 | 0.803254 | 3.805764e-49 | -8.615850e-47 |
| Msa0384800 | Msa0596150 | 0.832094 | 1.150251e-55 | -8.615850e-47 |
| Msa0384800 | Msa0598780 | 0.819135 | 1.361528e-52 | -8.615850e-47 |
| Msa0384800 | Msa0604350 | 0.820686 | 6.015729e-53 | -8.615850e-47 |
| Msa0384800 | Msa0636170 | 0.847110 | 1.422430e-59 | -8.615850e-47 |
| Msa0384800 | Msa0639610 | 0.860179 | 2.473639e-63 | -8.615850e-47 |
| Msa0384800 | Msa0678930 | 0.847314 | 1.250819e-59 | -8.615850e-47 |
| Msa0384800 | Msa0694370 | 0.835865 | 1.308159e-56 | -8.615850e-47 |
| Msa0384800 | Msa0697060 | 0.809121 | 2.212451e-50 | -8.615850e-47 |
| Msa0384800 | Msa0725850 | 0.826173 | 3.136702e-54 | -8.615850e-47 |
| Msa0384800 | Msa0726140 | 0.942983 | 2.724262e-102 | -8.615850e-47 |
| Msa0384800 | Msa0729800 | 0.846782 | 1.749376e-59 | -8.615850e-47 |
| Msa0384800 | Msa0732310 | 0.807429 | 5.077677e-50 | -8.615850e-47 |
| Msa0384800 | Msa0732710 | 0.812004 | 5.272712e-51 | -8.615850e-47 |
| Msa0384800 | Msa0733290 | 0.846257 | 2.432777e-59 | -8.615850e-47 |
| Msa0384800 | Msa0735080 | 0.836044 | 1.178487e-56 | -8.615850e-47 |
| Msa0384800 | Msa0741990 | 0.825961 | 3.522364e-54 | -8.615850e-47 |
| Msa0384800 | Msa0743810 | 0.889390 | 2.527945e-73 | -8.615850e-47 |
| Msa0384800 | Msa0745060 | 0.883636 | 3.793965e-71 | -8.615850e-47 |
| Msa0384800 | Msa0764960 | 0.808579 | 2.889854e-50 | -8.615850e-47 |
| Msa0384800 | Msa0766630 | 0.823166 | 1.603464e-53 | -8.615850e-47 |
| Msa0384800 | Msa0767720 | 0.887775 | 1.060542e-72 | -8.615850e-47 |
| Msa0384800 | Msa0777870 | 0.834579 | 2.761918e-56 | -8.615850e-47 |
| Msa0384800 | Msa0783160 | 0.893555 | 5.636508e-75 | -8.615850e-47 |
| Msa0384800 | Msa0784290 | 0.810980 | 8.800377e-51 | -8.615850e-47 |
| Msa0384800 | Msa0787600 | 0.877542 | 5.782180e-69 | -8.615850e-47 |
| Msa0384800 | Msa0789250 | 0.831297 | 1.808556e-55 | -8.615850e-47 |
| Msa0384800 | Msa0808010 | 0.839726 | 1.333261e-57 | -8.615850e-47 |
| Msa0384800 | Msa0808020 | 0.832571 | 8.762953e-56 | -8.615850e-47 |
| Msa0384800 | Msa0811080 | 0.848395 | 6.300803e-60 | -8.615850e-47 |
| Msa0384800 | Msa0811270 | 0.819966 | 8.798836e-53 | -8.615850e-47 |
| Msa0384800 | Msa0824600 | 0.811794 | 5.857422e-51 | -8.615850e-47 |
| Msa0384800 | Msa0825860 | 0.891518 | 3.691840e-74 | -8.615850e-47 |
| Msa0384800 | Msa0833290 | 0.828427 | 9.043078e-55 | -8.615850e-47 |
| Msa0384800 | Msa0833300 | 0.813004 | 3.187934e-51 | -8.615850e-47 |
| Msa0384800 | Msa0845930 | 0.814152 | 1.782245e-51 | -8.615850e-47 |
| Msa0384800 | Msa0846210 | 0.832733 | 7.985865e-56 | -8.615850e-47 |
| Msa0384800 | Msa0846330 | 0.885450 | 8.048043e-72 | -8.615850e-47 |
| Msa0384800 | Msa0846350 | 0.909491 | 5.368867e-82 | -8.615850e-47 |
| Msa0384800 | Msa0848960 | 0.811453 | 6.948917e-51 | -8.615850e-47 |
| Msa0384800 | Msa0849360 | 0.809631 | 1.720011e-50 | -8.615850e-47 |
| Msa0384800 | Msa0854980 | 0.824533 | 7.667244e-54 | -8.615850e-47 |
| Msa0384800 | Msa0858980 | 0.835753 | 1.397016e-56 | -8.615850e-47 |
| Msa0384800 | Msa0865320 | 0.869325 | 3.370657e-66 | -8.615850e-47 |
| Msa0384800 | Msa0872230 | 0.819873 | 9.239130e-53 | -8.615850e-47 |
| Msa0384800 | Msa0884150 | 0.811998 | 5.288914e-51 | -8.615850e-47 |
| Msa0384800 | Msa0885190 | 0.806316 | 8.728337e-50 | -8.615850e-47 |
| Msa0384800 | Msa0885210 | 0.801910 | 7.204257e-49 | -8.615850e-47 |
| Msa0384800 | Msa0885280 | 0.866233 | 3.311392e-65 | -8.615850e-47 |
| Msa0384800 | Msa0885290 | 0.887536 | 1.309020e-72 | -8.615850e-47 |
| Msa0384800 | Msa0887920 | 0.814817 | 1.270184e-51 | -8.615850e-47 |
| Msa0384800 | Msa0888370 | 0.835649 | 1.483649e-56 | -8.615850e-47 |
| Msa0384800 | Msa0888420 | 0.809511 | 1.824845e-50 | -8.615850e-47 |
| Msa0384800 | Msa0896080 | 0.815342 | 9.708055e-52 | -8.615850e-47 |
| Msa0384800 | Msa0898080 | 0.805516 | 1.285261e-49 | -8.615850e-47 |
| Msa0384800 | Msa0898380 | 0.803960 | 2.716448e-49 | -8.615850e-47 |
| Msa0384800 | Msa0907260 | 0.854904 | 9.022427e-62 | -8.615850e-47 |
| Msa0384800 | Msa0914280 | 0.823887 | 1.087078e-53 | -8.615850e-47 |
| Msa0384800 | Msa0922720 | 0.803840 | 2.877267e-49 | -8.615850e-47 |
| Msa0384800 | Msa0952350 | 0.805837 | 1.100831e-49 | -8.615850e-47 |
| Msa0384800 | Msa0952720 | 0.806964 | 6.369041e-50 | -8.615850e-47 |
| Msa0384800 | Msa0954020 | 0.813616 | 2.338712e-51 | -8.615850e-47 |
| Msa0384800 | Msa0954910 | 0.838761 | 2.373842e-57 | -8.615850e-47 |
| Msa0384800 | Msa0956270 | 0.844657 | 6.602518e-59 | -8.615850e-47 |
| Msa0384800 | Msa0957680 | 0.803172 | 3.956816e-49 | -8.615850e-47 |
| Msa0384800 | Msa0957860 | 0.837990 | 3.751366e-57 | -8.615850e-47 |
| Msa0384800 | Msa0957960 | 0.839167 | 1.862811e-57 | -8.615850e-47 |
| Msa0384800 | Msa0979410 | 0.831137 | 1.979806e-55 | -8.615850e-47 |
| Msa0384800 | Msa0979850 | 0.828134 | 1.064544e-54 | -8.615850e-47 |
| Msa0384800 | Msa0981370 | 0.845507 | 3.889505e-59 | -8.615850e-47 |
| Msa0384800 | Msa0986360 | 0.814819 | 1.268419e-51 | -8.615850e-47 |
| Msa0384800 | Msa0986400 | 0.822764 | 1.989430e-53 | -8.615850e-47 |
| Msa0384800 | Msa0989060 | 0.888862 | 4.050478e-73 | -8.615850e-47 |
| Msa0384800 | Msa0998690 | 0.808828 | 2.556604e-50 | -8.615850e-47 |
| Msa0384800 | Msa1002310 | 0.810085 | 1.373388e-50 | -8.615850e-47 |
| Msa0384800 | Msa1014540 | 0.800104 | 1.685752e-48 | -8.615850e-47 |
| Msa0384800 | Msa1015950 | 0.801289 | 9.657467e-49 | -8.615850e-47 |
| Msa0384800 | Msa1016280 | 0.880480 | 5.302665e-70 | -8.615850e-47 |
| Msa0384800 | Msa1023050 | 0.802229 | 6.194835e-49 | -8.615850e-47 |
| Msa0384800 | Msa1024240 | 0.861316 | 1.117542e-63 | -8.615850e-47 |
| Msa0384800 | Msa1025360 | 0.883288 | 5.092181e-71 | -8.615850e-47 |
| Msa0384800 | Msa1025370 | 0.883710 | 3.563442e-71 | -8.615850e-47 |
| Msa0384800 | Msa1044830 | 0.883984 | 2.822463e-71 | -8.615850e-47 |
| Msa0384800 | Msa1044840 | 0.887206 | 1.748475e-72 | -8.615850e-47 |
| Msa0384800 | Msa1054790 | 0.819358 | 1.211246e-52 | -8.615850e-47 |
| Msa0384800 | Msa1057920 | 0.800647 | 1.306693e-48 | -8.615850e-47 |
| Msa0384800 | Msa1060840 | 0.826071 | 3.317018e-54 | -8.615850e-47 |
| Msa0384800 | Msa1092990 | 0.886072 | 4.698668e-72 | -8.615850e-47 |
| Msa0384800 | Msa1100980 | 0.891227 | 4.815598e-74 | -8.615850e-47 |
| Msa0384800 | Msa1109440 | 0.866165 | 3.479691e-65 | -8.615850e-47 |
| Msa0384800 | Msa1121200 | 0.858807 | 6.394199e-63 | -8.615850e-47 |
| Msa0384800 | Msa1135220 | 0.814454 | 1.528174e-51 | -8.615850e-47 |
| Msa0384800 | Msa1135740 | 0.881133 | 3.091413e-70 | -8.615850e-47 |
| Msa0384800 | Msa1136090 | 0.874963 | 4.476042e-68 | -8.615850e-47 |
| Msa0384800 | Msa1137690 | 0.838598 | 2.614985e-57 | -8.615850e-47 |
| Msa0384800 | Msa1146110 | 0.857796 | 1.278185e-62 | -8.615850e-47 |
| Msa0384800 | Msa1148020 | 0.808744 | 2.663856e-50 | -8.615850e-47 |
| Msa0384800 | Msa1149360 | 0.809059 | 2.281543e-50 | -8.615850e-47 |
| Msa0384800 | Msa1150370 | 0.838870 | 2.224115e-57 | -8.615850e-47 |
| Msa0384800 | Msa1160670 | 0.836295 | 1.017554e-56 | -8.615850e-47 |
| Msa0384800 | Msa1173920 | 0.868486 | 6.301752e-66 | -8.615850e-47 |
| Msa0384800 | Msa1182090 | 0.834443 | 2.988370e-56 | -8.615850e-47 |
| Msa0384800 | Msa1184420 | 0.810134 | 1.340717e-50 | -8.615850e-47 |
| Msa0384800 | Msa1187940 | 0.876698 | 1.134904e-68 | -8.615850e-47 |
| Msa0384800 | Msa1187950 | 0.858988 | 5.641711e-63 | -8.615850e-47 |
| Msa0384800 | Msa1192640 | 0.890221 | 1.198312e-73 | -8.615850e-47 |
| Msa0384800 | Msa1193730 | 0.805367 | 1.381262e-49 | -8.615850e-47 |
| Msa0384800 | Msa1211030 | 0.805144 | 1.538378e-49 | -8.615850e-47 |
| Msa0384800 | Msa1230430 | 0.816534 | 5.262510e-52 | -8.615850e-47 |
| Msa0384800 | Msa1246880 | 0.854277 | 1.370199e-61 | -8.615850e-47 |
| Msa0384800 | Msa1260100 | 0.824960 | 6.079855e-54 | -8.615850e-47 |
| Msa0384800 | Msa1269670 | 0.891342 | 4.336763e-74 | -8.615850e-47 |
| Msa0384800 | Msa1270230 | 0.879187 | 1.529432e-69 | -8.615850e-47 |
| Msa0384800 | Msa1270240 | 0.887074 | 1.963617e-72 | -8.615850e-47 |
| Msa0384800 | Msa1270270 | 0.864504 | 1.159630e-64 | -8.615850e-47 |
| Msa0384800 | Msa1273230 | 0.834710 | 2.560006e-56 | -8.615850e-47 |
| Msa0384800 | Msa1283330 | 0.896767 | 2.690007e-76 | -8.615850e-47 |
| Msa0384800 | Msa1284680 | 0.810562 | 1.083863e-50 | -8.615850e-47 |
| Msa0384800 | Msa1285930 | 0.909062 | 8.625577e-82 | -8.615850e-47 |
| Msa0384800 | Msa1287800 | 0.878364 | 2.980441e-69 | -8.615850e-47 |
| Msa0384800 | Msa1287810 | 0.891730 | 3.040972e-74 | -8.615850e-47 |
| Msa0384800 | Msa1287820 | 0.825793 | 3.861199e-54 | -8.615850e-47 |
| Msa0384800 | Msa1287830 | 0.828796 | 7.364604e-55 | -8.615850e-47 |
| Msa0384800 | Msa1289420 | 0.807533 | 4.825010e-50 | -8.615850e-47 |
| Msa0384800 | Msa1289430 | 0.855539 | 5.896725e-62 | -8.615850e-47 |
| Msa0384800 | Msa1297210 | 0.866272 | 3.218436e-65 | -8.615850e-47 |
| Msa0384800 | Msa1305480 | 0.810637 | 1.044160e-50 | -8.615850e-47 |
| Msa0384800 | Msa1307890 | 0.832420 | 9.550411e-56 | -8.615850e-47 |
| Msa0384800 | Msa1310120 | 0.829281 | 5.619456e-55 | -8.615850e-47 |
| Msa0384800 | Msa1314280 | 0.806502 | 7.973559e-50 | -8.615850e-47 |
| Msa0384800 | Msa1320300 | 0.838006 | 3.716133e-57 | -8.615850e-47 |
| Msa0384800 | Msa1321560 | 0.801946 | 7.081306e-49 | -8.615850e-47 |
| Msa0384800 | Msa1340590 | 0.852838 | 3.548960e-61 | -8.615850e-47 |
| Msa0384800 | Msa1342200 | 0.890195 | 1.226957e-73 | -8.615850e-47 |
| Msa0384800 | Msa1344520 | 0.814981 | 1.168225e-51 | -8.615850e-47 |
| Msa0384800 | Msa1369430 | 0.856562 | 2.957410e-62 | -8.615850e-47 |
| Msa0384800 | Msa1370210 | 0.809508 | 1.827633e-50 | -8.615850e-47 |
| Msa0384800 | Msa1382690 | 0.828067 | 1.104764e-54 | -8.615850e-47 |
| Msa0384800 | Msa1382700 | 0.809282 | 2.043578e-50 | -8.615850e-47 |
| Msa0384800 | Msa1386330 | 0.843884 | 1.064402e-58 | -8.615850e-47 |
| Msa0384800 | Msa1397580 | 0.844874 | 5.768565e-59 | -8.615850e-47 |
| Msa0384800 | Msa1397860 | 0.800837 | 1.195106e-48 | -8.615850e-47 |
| Msa0384800 | Msa1402790 | 0.844864 | 5.803679e-59 | -8.615850e-47 |
| Msa0384800 | Msa1402930 | 0.808978 | 2.374218e-50 | -8.615850e-47 |
| Msa0384800 | Msa1404000 | 0.930390 | 1.755620e-93 | -8.615850e-47 |
| Msa0384800 | Msa1408780 | 0.827279 | 1.707850e-54 | -8.615850e-47 |
| Msa0384800 | Msa1415310 | 0.886033 | 4.861153e-72 | -8.615850e-47 |
| Msa0384800 | Msa1422180 | 0.886938 | 2.210847e-72 | -8.615850e-47 |
| Msa0384800 | Msa1433120 | 0.858992 | 5.628538e-63 | -8.615850e-47 |
| Msa0384800 | Msa1451190 | 0.830045 | 3.662987e-55 | -8.615850e-47 |
| Msa0251320 | Msa0384800 | 0.829916 | 3.937979e-55 | -8.615850e-47 |
| Msa0256440 | Msa0384800 | 0.808168 | 3.535394e-50 | -8.615850e-47 |
| Msa0264450 | Msa0384800 | 0.804170 | 2.456473e-49 | -8.615850e-47 |
| Msa0267000 | Msa0384800 | 0.878578 | 2.506432e-69 | -8.615850e-47 |
| Msa0267010 | Msa0384800 | 0.880754 | 4.228233e-70 | -8.615850e-47 |
| Msa0270520 | Msa0384800 | 0.872761 | 2.480408e-67 | -8.615850e-47 |
| Msa0295770 | Msa0384800 | 0.804001 | 2.663101e-49 | -8.615850e-47 |
| Msa0304170 | Msa0384800 | 0.840444 | 8.661796e-58 | -8.615850e-47 |
| Msa0306460 | Msa0384800 | 0.866463 | 2.799005e-65 | -8.615850e-47 |
| Msa0309020 | Msa0384800 | 0.827938 | 1.186762e-54 | -8.615850e-47 |
| Msa0311750 | Msa0384800 | 0.835892 | 1.287609e-56 | -8.615850e-47 |
| Msa0313760 | Msa0384800 | 0.868074 | 8.555950e-66 | -8.615850e-47 |
| Msa0329190 | Msa0384800 | 0.801566 | 8.474679e-49 | -8.615850e-47 |
| Msa0337900 | Msa0384800 | 0.816439 | 5.528377e-52 | -8.615850e-47 |
| Msa0342240 | Msa0384800 | 0.873665 | 1.232771e-67 | -8.615850e-47 |
| Msa0353190 | Msa0384800 | 0.801733 | 7.835060e-49 | -8.615850e-47 |
| Msa0360510 | Msa0384800 | 0.856612 | 2.860377e-62 | -8.615850e-47 |
| Msa0363300 | Msa0384800 | 0.830694 | 2.542602e-55 | -8.615850e-47 |
| Msa0363750 | Msa0384800 | 0.804010 | 2.652639e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384800 | MtrunA17_Chr4g0002051 | 51.707 | 205 | 91 | 4 | 18 | 220 | 83 | 281 | 3.51e-65 | 204 |
| Msa0384800 | MtrunA17_Chr8g0381471 | 50.704 | 142 | 63 | 3 | 81 | 220 | 1 | 137 | 1.20e-42 | 142 |
| Msa0384800 | MtrunA17_Chr2g0287671 | 29.075 | 227 | 117 | 6 | 16 | 212 | 172 | 384 | 1.14e-22 | 95.1 |
| Msa0384800 | MtrunA17_Chr8g0361701 | 31.081 | 148 | 81 | 5 | 70 | 212 | 111 | 242 | 5.84e-14 | 68.9 |
| Msa0384800 | MtrunA17_Chr3g0086461 | 26.203 | 187 | 122 | 7 | 27 | 209 | 34 | 208 | 1.45e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTTATCGAAAGCGATTTA+TGG | 0.217435 | 3_1:+88123965 | Msa0384800:CDS |
| TCAAGTTTCAAATCAACTTA+TGG | 0.227227 | 3_1:+88124368 | Msa0384800:CDS |
| AACCAATATTTAGGATAAAA+TGG | 0.269706 | 3_1:-88123795 | None:intergenic |
| ATTGTTTCAGGTAATTGATT+TGG | 0.299049 | 3_1:+88123734 | Msa0384800:intron |
| TAGGAATGATTGTGCGATTT+GGG | 0.304560 | 3_1:+88124560 | Msa0384800:intron |
| TTTCATGGAAAACTTGTTGA+TGG | 0.314872 | 3_1:+88124322 | Msa0384800:CDS |
| ATCAAATGGATGATGGAAAA+AGG | 0.314997 | 3_1:+88124585 | Msa0384800:CDS |
| GTCGGAATAAACCAATATTT+AGG | 0.320561 | 3_1:-88123804 | None:intergenic |
| CTTGATACTTGTCTTCCTCT+TGG | 0.328648 | 3_1:-88124202 | None:intergenic |
| TTAGGAATGATTGTGCGATT+TGG | 0.345924 | 3_1:+88124559 | Msa0384800:intron |
| GAAGACAAGTATCAAGAAAA+TGG | 0.346177 | 3_1:+88124209 | Msa0384800:CDS |
| GGTTATCGAAAGCGATTTAT+GGG | 0.356200 | 3_1:+88123966 | Msa0384800:CDS |
| TGACATCGGCAGAAAGGAAT+TGG | 0.366356 | 3_1:+88124143 | Msa0384800:CDS |
| TTGATACTTGTCTTCCTCTT+GGG | 0.380492 | 3_1:-88124201 | None:intergenic |
| ATCATCGTCAATAAATTTGT+TGG | 0.391722 | 3_1:-88123625 | None:intergenic |
| GTTTATTCCGACCACATTAT+CGG | 0.391757 | 3_1:+88123815 | Msa0384800:CDS |
| TCATCGTCAATAAATTTGTT+GGG | 0.434932 | 3_1:-88123624 | None:intergenic |
| CGATACATGATACCGTTCAT+TGG | 0.450387 | 3_1:+88124106 | Msa0384800:CDS |
| TTAGCAACTCGTGTTGGCAT+TGG | 0.451963 | 3_1:+88123917 | Msa0384800:intron |
| GTGCGATTTGGGTAATCAAA+TGG | 0.465432 | 3_1:+88124571 | Msa0384800:CDS |
| ACAGAGATAGATTACGTTGA+AGG | 0.486255 | 3_1:+88123573 | Msa0384800:CDS |
| ATGGATCCCTCTTTCTATGT+GGG | 0.495254 | 3_1:+88124341 | Msa0384800:CDS |
| TTTGTTGCTCCACGTGGTTA+CGG | 0.500598 | 3_1:+88124413 | Msa0384800:CDS |
| GATGGATCCCTCTTTCTATG+TGG | 0.506410 | 3_1:+88124340 | Msa0384800:CDS |
| AGGAACTAGGAAGTTGCTGC+AGG | 0.508385 | 3_1:+88123593 | Msa0384800:CDS |
| TTGGGTAATCAAATGGATGA+TGG | 0.515751 | 3_1:+88124578 | Msa0384800:CDS |
| CATAATTGACATCGGCAGAA+AGG | 0.522205 | 3_1:+88124137 | Msa0384800:CDS |
| TAATTAATCTTAATTGCTGT+AGG | 0.545396 | 3_1:+88123532 | Msa0384800:CDS |
| TAGATTACGTTGAAGGAACT+AGG | 0.550308 | 3_1:+88123580 | Msa0384800:CDS |
| GATCCCTCTTTCTATGTGGG+TGG | 0.554391 | 3_1:+88124344 | Msa0384800:CDS |
| TGAACCACCCACATAGAAAG+AGG | 0.556566 | 3_1:-88124348 | None:intergenic |
| GAGTGCTGAGTTTATTTCAA+AGG | 0.557552 | 3_1:+88123992 | Msa0384800:CDS |
| CCACGTGGTTACGGAAGTCA+AGG | 0.569221 | 3_1:+88124422 | Msa0384800:CDS |
| ATCGAAAGCGATTTATGGGG+GGG | 0.572674 | 3_1:+88123970 | Msa0384800:CDS |
| TGCCGATGTCAATTATGAGA+AGG | 0.572917 | 3_1:-88124131 | None:intergenic |
| CAATGAACGGTATCATGTAT+CGG | 0.573628 | 3_1:-88124105 | None:intergenic |
| TTAATAATTTACCGATAATG+TGG | 0.589365 | 3_1:-88123826 | None:intergenic |
| ATTTATTTAGCAACTCGTGT+TGG | 0.592550 | 3_1:+88123911 | Msa0384800:intron |
| TTATCGAAAGCGATTTATGG+GGG | 0.592691 | 3_1:+88123968 | Msa0384800:CDS |
| TAATTTACCGATAATGTGGT+CGG | 0.599623 | 3_1:-88123822 | None:intergenic |
| TCTTAATTGCTGTAGGCAAG+AGG | 0.599814 | 3_1:+88123539 | Msa0384800:CDS |
| TATCGAAAGCGATTTATGGG+GGG | 0.620517 | 3_1:+88123969 | Msa0384800:CDS |
| TTCCTTCTCATAATTGACAT+CGG | 0.629925 | 3_1:+88124129 | Msa0384800:CDS |
| GGAACTAGGAAGTTGCTGCA+GGG | 0.630697 | 3_1:+88123594 | Msa0384800:CDS |
| GTTATCGAAAGCGATTTATG+GGG | 0.643499 | 3_1:+88123967 | Msa0384800:CDS |
| TATGAGAAGGAACCAATGAA+CGG | 0.646603 | 3_1:-88124118 | None:intergenic |
| TTTAAGTTTGTTGCTCCACG+TGG | 0.650344 | 3_1:+88124407 | Msa0384800:CDS |
| GTTCGTCAGCTCTTCCCAAG+AGG | 0.652918 | 3_1:+88124187 | Msa0384800:CDS |
| GAACCACCCACATAGAAAGA+GGG | 0.662397 | 3_1:-88124347 | None:intergenic |
| CCTTGACTTCCGTAACCACG+TGG | 0.696038 | 3_1:-88124422 | None:intergenic |
| CACGTGGTTACGGAAGTCAA+GGG | 0.703622 | 3_1:+88124423 | Msa0384800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTCATAATTTTTTATTT+AGG | + | chr3_1:88124541-88124560 | Msa0384800:intron | 10.0% |
| !!! | ATACTCATAATTTTTTATTT+AGG | + | chr3_1:88124541-88124560 | Msa0384800:intron | 10.0% |
| !! | TAATTAATCTTAATTGCTGT+AGG | + | chr3_1:88123532-88123551 | Msa0384800:CDS | 20.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | + | chr3_1:88123722-88123741 | Msa0384800:intron | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | - | chr3_1:88123798-88123817 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | - | chr3_1:88123829-88123848 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | - | chr3_1:88124449-88124468 | None:intergenic | 20.0% |
| !! | TAATTAATCTTAATTGCTGT+AGG | + | chr3_1:88123532-88123551 | Msa0384800:CDS | 20.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | + | chr3_1:88123722-88123741 | Msa0384800:intron | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | - | chr3_1:88123798-88123817 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | - | chr3_1:88123829-88123848 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | - | chr3_1:88124449-88124468 | None:intergenic | 20.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | - | chr3_1:88123627-88123646 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | - | chr3_1:88123628-88123647 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | + | chr3_1:88123734-88123753 | Msa0384800:intron | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | + | chr3_1:88123793-88123812 | Msa0384800:CDS | 25.0% |
| !!! | ATTTTAATGTATGCTCATTG+TGG | + | chr3_1:88123878-88123897 | Msa0384800:intron | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | + | chr3_1:88123944-88123963 | Msa0384800:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | + | chr3_1:88123945-88123964 | Msa0384800:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | - | chr3_1:88124051-88124070 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | - | chr3_1:88124052-88124071 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | + | chr3_1:88124307-88124326 | Msa0384800:intron | 25.0% |
| ! | TCAAGTTTCAAATCAACTTA+TGG | + | chr3_1:88124368-88124387 | Msa0384800:CDS | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | - | chr3_1:88123627-88123646 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | - | chr3_1:88123628-88123647 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | + | chr3_1:88123734-88123753 | Msa0384800:intron | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | + | chr3_1:88123793-88123812 | Msa0384800:CDS | 25.0% |
| !!! | ATTTTAATGTATGCTCATTG+TGG | + | chr3_1:88123878-88123897 | Msa0384800:intron | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | + | chr3_1:88123944-88123963 | Msa0384800:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | + | chr3_1:88123945-88123964 | Msa0384800:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | - | chr3_1:88124051-88124070 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | - | chr3_1:88124052-88124071 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | + | chr3_1:88124307-88124326 | Msa0384800:intron | 25.0% |
| ! | TCAAGTTTCAAATCAACTTA+TGG | + | chr3_1:88124368-88124387 | Msa0384800:CDS | 25.0% |
| GTCGGAATAAACCAATATTT+AGG | - | chr3_1:88123807-88123826 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | - | chr3_1:88123825-88123844 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | + | chr3_1:88123911-88123930 | Msa0384800:intron | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | - | chr3_1:88123948-88123967 | None:intergenic | 30.0% |
| TTCCTTCTCATAATTGACAT+CGG | + | chr3_1:88124129-88124148 | Msa0384800:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | + | chr3_1:88124209-88124228 | Msa0384800:CDS | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | + | chr3_1:88124322-88124341 | Msa0384800:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | + | chr3_1:88124585-88124604 | Msa0384800:CDS | 30.0% |
| GTCGGAATAAACCAATATTT+AGG | - | chr3_1:88123807-88123826 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | - | chr3_1:88123825-88123844 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | + | chr3_1:88123911-88123930 | Msa0384800:intron | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | - | chr3_1:88123948-88123967 | None:intergenic | 30.0% |
| TTCCTTCTCATAATTGACAT+CGG | + | chr3_1:88124129-88124148 | Msa0384800:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | + | chr3_1:88124209-88124228 | Msa0384800:CDS | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | + | chr3_1:88124322-88124341 | Msa0384800:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | + | chr3_1:88124585-88124604 | Msa0384800:CDS | 30.0% |
| ACAGAGATAGATTACGTTGA+AGG | + | chr3_1:88123573-88123592 | Msa0384800:CDS | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | + | chr3_1:88123580-88123599 | Msa0384800:CDS | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | + | chr3_1:88123815-88123834 | Msa0384800:CDS | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | + | chr3_1:88123966-88123985 | Msa0384800:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | + | chr3_1:88123967-88123986 | Msa0384800:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | + | chr3_1:88123968-88123987 | Msa0384800:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | + | chr3_1:88123992-88124011 | Msa0384800:CDS | 35.0% |
| CAATGAACGGTATCATGTAT+CGG | - | chr3_1:88124108-88124127 | None:intergenic | 35.0% | |
| TATGAGAAGGAACCAATGAA+CGG | - | chr3_1:88124121-88124140 | None:intergenic | 35.0% | |
| TTGATACTTGTCTTCCTCTT+GGG | - | chr3_1:88124204-88124223 | None:intergenic | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | + | chr3_1:88124559-88124578 | Msa0384800:intron | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | + | chr3_1:88124560-88124579 | Msa0384800:intron | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | + | chr3_1:88124578-88124597 | Msa0384800:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | + | chr3_1:88123573-88123592 | Msa0384800:CDS | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | + | chr3_1:88123580-88123599 | Msa0384800:CDS | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | + | chr3_1:88123815-88123834 | Msa0384800:CDS | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | + | chr3_1:88123966-88123985 | Msa0384800:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | + | chr3_1:88123967-88123986 | Msa0384800:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | + | chr3_1:88123968-88123987 | Msa0384800:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | + | chr3_1:88123992-88124011 | Msa0384800:CDS | 35.0% |
| CAATGAACGGTATCATGTAT+CGG | - | chr3_1:88124108-88124127 | None:intergenic | 35.0% | |
| TATGAGAAGGAACCAATGAA+CGG | - | chr3_1:88124121-88124140 | None:intergenic | 35.0% | |
| TTGATACTTGTCTTCCTCTT+GGG | - | chr3_1:88124204-88124223 | None:intergenic | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | + | chr3_1:88124559-88124578 | Msa0384800:intron | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | + | chr3_1:88124560-88124579 | Msa0384800:intron | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | + | chr3_1:88124578-88124597 | Msa0384800:CDS | 35.0% | |
| TCTTAATTGCTGTAGGCAAG+AGG | + | chr3_1:88123539-88123558 | Msa0384800:CDS | 40.0% | |
| GGGTTATCGAAAGCGATTTA+TGG | + | chr3_1:88123965-88123984 | Msa0384800:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | + | chr3_1:88123969-88123988 | Msa0384800:CDS | 40.0% | |
| CGATACATGATACCGTTCAT+TGG | + | chr3_1:88124106-88124125 | Msa0384800:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | - | chr3_1:88124134-88124153 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | + | chr3_1:88124137-88124156 | Msa0384800:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | - | chr3_1:88124205-88124224 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | + | chr3_1:88124341-88124360 | Msa0384800:CDS | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | + | chr3_1:88124407-88124426 | Msa0384800:CDS | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | + | chr3_1:88124571-88124590 | Msa0384800:CDS | 40.0% |
| TCTTAATTGCTGTAGGCAAG+AGG | + | chr3_1:88123539-88123558 | Msa0384800:CDS | 40.0% | |
| GGGTTATCGAAAGCGATTTA+TGG | + | chr3_1:88123965-88123984 | Msa0384800:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | + | chr3_1:88123969-88123988 | Msa0384800:CDS | 40.0% | |
| CGATACATGATACCGTTCAT+TGG | + | chr3_1:88124106-88124125 | Msa0384800:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | - | chr3_1:88124134-88124153 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | + | chr3_1:88124137-88124156 | Msa0384800:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | - | chr3_1:88124205-88124224 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | + | chr3_1:88124341-88124360 | Msa0384800:CDS | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | + | chr3_1:88124407-88124426 | Msa0384800:CDS | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | + | chr3_1:88124571-88124590 | Msa0384800:CDS | 40.0% |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | + | chr3_1:88123917-88123936 | Msa0384800:intron | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | + | chr3_1:88123970-88123989 | Msa0384800:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | + | chr3_1:88124143-88124162 | Msa0384800:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | + | chr3_1:88124340-88124359 | Msa0384800:CDS | 45.0% | |
| GAACCACCCACATAGAAAGA+GGG | - | chr3_1:88124350-88124369 | None:intergenic | 45.0% | |
| TGAACCACCCACATAGAAAG+AGG | - | chr3_1:88124351-88124370 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | + | chr3_1:88124413-88124432 | Msa0384800:CDS | 45.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | + | chr3_1:88123917-88123936 | Msa0384800:intron | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | + | chr3_1:88123970-88123989 | Msa0384800:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | + | chr3_1:88124143-88124162 | Msa0384800:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | + | chr3_1:88124340-88124359 | Msa0384800:CDS | 45.0% | |
| GAACCACCCACATAGAAAGA+GGG | - | chr3_1:88124350-88124369 | None:intergenic | 45.0% | |
| TGAACCACCCACATAGAAAG+AGG | - | chr3_1:88124351-88124370 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | + | chr3_1:88124413-88124432 | Msa0384800:CDS | 45.0% | |
| !!! | TAAATATTATCTTATTTTAT+AGG | + | chr3_1:88123492-88123511 | Msa0384800:intron | 5.0% |
| !!! | TAAATATTATCTTATTTTAT+AGG | + | chr3_1:88123492-88123511 | Msa0384800:intron | 5.0% |
| AGGAACTAGGAAGTTGCTGC+AGG | + | chr3_1:88123593-88123612 | Msa0384800:CDS | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | + | chr3_1:88123594-88123613 | Msa0384800:CDS | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | + | chr3_1:88124344-88124363 | Msa0384800:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | + | chr3_1:88124423-88124442 | Msa0384800:CDS | 50.0% | |
| AGGAACTAGGAAGTTGCTGC+AGG | + | chr3_1:88123593-88123612 | Msa0384800:CDS | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | + | chr3_1:88123594-88123613 | Msa0384800:CDS | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | + | chr3_1:88124344-88124363 | Msa0384800:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | + | chr3_1:88124423-88124442 | Msa0384800:CDS | 50.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | + | chr3_1:88124187-88124206 | Msa0384800:CDS | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | - | chr3_1:88124425-88124444 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | + | chr3_1:88124422-88124441 | Msa0384800:CDS | 55.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | + | chr3_1:88124187-88124206 | Msa0384800:CDS | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | - | chr3_1:88124425-88124444 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | + | chr3_1:88124422-88124441 | Msa0384800:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 88123437 | 88124629 | 88123437 | ID=Msa0384800;Name=Msa0384800 |
| chr3_1 | mRNA | 88123437 | 88124629 | 88123437 | ID=Msa0384800-mRNA-1;Parent=Msa0384800;Name=Msa0384800-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|0.42|0.83|0.71|7|0|221 |
| chr3_1 | exon | 88123437 | 88123440 | 88123437 | ID=Msa0384800-mRNA-1:exon:23698;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88123514 | 88123647 | 88123514 | ID=Msa0384800-mRNA-1:exon:23699;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88123744 | 88123836 | 88123744 | ID=Msa0384800-mRNA-1:exon:23700;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88123921 | 88124013 | 88123921 | ID=Msa0384800-mRNA-1:exon:23701;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88124096 | 88124230 | 88124096 | ID=Msa0384800-mRNA-1:exon:23702;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88124317 | 88124453 | 88124317 | ID=Msa0384800-mRNA-1:exon:23703;Parent=Msa0384800-mRNA-1 |
| chr3_1 | exon | 88124563 | 88124629 | 88124563 | ID=Msa0384800-mRNA-1:exon:23704;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88123437 | 88123440 | 88123437 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88123514 | 88123647 | 88123514 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88123744 | 88123836 | 88123744 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88123921 | 88124013 | 88123921 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88124096 | 88124230 | 88124096 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88124317 | 88124453 | 88124317 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| chr3_1 | CDS | 88124563 | 88124629 | 88124563 | ID=Msa0384800-mRNA-1:cds;Parent=Msa0384800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
