Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860670 | XP_003617013.1 | 98.427 | 445 | 3 | 2 | 7 | 447 | 1 | 445 | 0.0 | 874 |
| Msa0860670 | XP_003617013.1 | 99.029 | 103 | 1 | 0 | 447 | 549 | 568 | 670 | 2.60e-62 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860670 | sp|Q39238|TSL_ARATH | 58.557 | 485 | 170 | 11 | 7 | 468 | 1 | 477 | 4.07e-172 | 506 |
| Msa0860670 | sp|Q39238|TSL_ARATH | 82.692 | 104 | 17 | 1 | 447 | 549 | 585 | 688 | 9.60e-55 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860670 | G7KHC0 | 98.427 | 445 | 3 | 2 | 7 | 447 | 1 | 445 | 0.0 | 874 |
| Msa0860670 | G7KHC0 | 99.029 | 103 | 1 | 0 | 447 | 549 | 568 | 670 | 1.24e-62 | 227 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0860670 | 0.814226 | 1.715726e-51 | -8.615850e-47 |
| Msa0075880 | Msa0860670 | 0.803962 | 2.714112e-49 | -8.615850e-47 |
| Msa0076220 | Msa0860670 | 0.810854 | 9.368410e-51 | -8.615850e-47 |
| Msa0723760 | Msa0860670 | 0.809785 | 1.593432e-50 | -8.615850e-47 |
| Msa0739280 | Msa0860670 | 0.808882 | 2.489002e-50 | -8.615850e-47 |
| Msa0124250 | Msa0860670 | 0.813818 | 2.110914e-51 | -8.615850e-47 |
| Msa0394660 | Msa0860670 | 0.804290 | 2.319234e-49 | -8.615850e-47 |
| Msa0860670 | Msa0925250 | 0.867297 | 1.518046e-65 | -8.615850e-47 |
| Msa0860670 | Msa0925290 | 0.825203 | 5.328810e-54 | -8.615850e-47 |
| Msa0860670 | Msa0953120 | 0.804091 | 2.551088e-49 | -8.615850e-47 |
| Msa0860670 | Msa0966090 | 0.801993 | 6.926366e-49 | -8.615850e-47 |
| Msa0860670 | Msa1000880 | 0.802690 | 4.978614e-49 | -8.615850e-47 |
| Msa0860670 | Msa1070010 | 0.803994 | 2.672868e-49 | -8.615850e-47 |
| Msa0860670 | Msa1121490 | 0.800913 | 1.153151e-48 | -8.615850e-47 |
| Msa0860670 | Msa1222620 | 0.801040 | 1.086363e-48 | -8.615850e-47 |
| Msa0860670 | Msa1312950 | 0.805778 | 1.132903e-49 | -8.615850e-47 |
| Msa0860670 | Msa1403480 | 0.825159 | 5.458224e-54 | -8.615850e-47 |
| Msa0860670 | Msa1443060 | 0.827622 | 1.412971e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860670 | MtrunA17_Chr5g0440001 | 98.427 | 445 | 3 | 2 | 7 | 447 | 1 | 445 | 0.0 | 874 |
| Msa0860670 | MtrunA17_Chr5g0440001 | 99.029 | 103 | 1 | 0 | 447 | 549 | 568 | 670 | 2.39e-66 | 227 |
| Msa0860670 | MtrunA17_Chr5g0440131 | 89.625 | 347 | 11 | 4 | 126 | 447 | 4 | 350 | 0.0 | 596 |
| Msa0860670 | MtrunA17_Chr5g0440131 | 98.058 | 103 | 2 | 0 | 447 | 549 | 473 | 575 | 3.65e-66 | 225 |
| Msa0860670 | MtrunA17_Chr5g0440171 | 80.759 | 395 | 58 | 8 | 83 | 468 | 9 | 394 | 0.0 | 556 |
| Msa0860670 | MtrunA17_Chr5g0440171 | 93.204 | 103 | 7 | 0 | 447 | 549 | 502 | 604 | 7.31e-62 | 214 |
| Msa0860670 | MtrunA17_Chr5g0440051 | 74.286 | 175 | 18 | 2 | 276 | 447 | 3 | 153 | 6.02e-79 | 253 |
| Msa0860670 | MtrunA17_Chr5g0440051 | 77.778 | 72 | 16 | 0 | 447 | 518 | 276 | 347 | 2.16e-31 | 125 |
| Msa0860670 | MtrunA17_Chr5g0440181 | 86.822 | 129 | 14 | 1 | 322 | 447 | 4 | 132 | 4.83e-70 | 229 |
| Msa0860670 | MtrunA17_Chr5g0440181 | 80.556 | 72 | 14 | 0 | 447 | 518 | 255 | 326 | 6.72e-33 | 129 |
| Msa0860670 | MtrunA17_Chr5g0440041 | 94.444 | 72 | 4 | 0 | 447 | 518 | 110 | 181 | 5.46e-43 | 151 |
| Msa0860670 | MtrunA17_Chr5g0440021 | 95.833 | 72 | 3 | 0 | 447 | 518 | 199 | 270 | 4.24e-42 | 152 |
| Msa0860670 | MtrunA17_Chr5g0440021 | 45.833 | 120 | 8 | 2 | 328 | 447 | 14 | 76 | 1.23e-19 | 89.0 |
| Msa0860670 | MtrunA17_Chr0c14g0493691 | 97.015 | 67 | 2 | 0 | 236 | 302 | 1 | 67 | 4.91e-36 | 129 |
| Msa0860670 | MtrunA17_Chr3g0093631 | 85.075 | 67 | 7 | 1 | 384 | 447 | 2 | 68 | 7.45e-32 | 122 |
| Msa0860670 | MtrunA17_Chr3g0093641 | 95.238 | 42 | 2 | 0 | 477 | 518 | 1 | 42 | 5.25e-22 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860670 | AT5G20930.1 | 58.557 | 485 | 170 | 11 | 7 | 468 | 1 | 477 | 4.13e-173 | 506 |
| Msa0860670 | AT5G20930.1 | 82.692 | 104 | 17 | 1 | 447 | 549 | 585 | 688 | 9.76e-56 | 199 |
Find 140 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATTGATTTGATTAAAT+TGG | 0.172266 | 5_4:-59546636 | None:intergenic |
| TCTTCATGCGACCAAATTAT+TGG | 0.172998 | 5_4:+59555837 | Msa0860670:three_prime_UTR |
| CGACCCGCGTAAAGAAAATT+AGG | 0.193931 | 5_4:-59546891 | None:intergenic |
| TACGCCCTTCTAAACCTTCT+TGG | 0.225091 | 5_4:+59553206 | Msa0860670:CDS |
| TGGCCTTCTGTTTCTTCTGC+TGG | 0.238231 | 5_4:+59547244 | Msa0860670:CDS |
| TGCATTATAATCCAATAATT+TGG | 0.262889 | 5_4:-59555848 | None:intergenic |
| TTCTTCATGCATTTATCATT+TGG | 0.264930 | 5_4:+59555715 | Msa0860670:three_prime_UTR |
| GTGAAGGAAAGTGAAAATTT+TGG | 0.298507 | 5_4:-59546780 | None:intergenic |
| ACAAATTTCTTCAACAGTTT+CGG | 0.312055 | 5_4:+59550085 | Msa0860670:CDS |
| ATTCGTGATCAAAGAGAAAA+AGG | 0.328207 | 5_4:-59546928 | None:intergenic |
| TCGTGAAGACACAATTATTA+AGG | 0.329793 | 5_4:+59554769 | Msa0860670:CDS |
| CCTTTCCAAGAAGGTTTAGA+AGG | 0.336937 | 5_4:-59553211 | None:intergenic |
| CTCTTTGGCAGACGTCCTTT+CGG | 0.336945 | 5_4:+59554719 | Msa0860670:CDS |
| TTACATAAGGCATGCAATTC+GGG | 0.338859 | 5_4:+59553513 | Msa0860670:CDS |
| TGTTGAAGAAATTTGTGTTC+TGG | 0.346538 | 5_4:-59550078 | None:intergenic |
| GGAAGATGGTCAGGCGTTAA+AGG | 0.346557 | 5_4:+59551814 | Msa0860670:CDS |
| TATGTTGCATGCAAGCTTCA+TGG | 0.347747 | 5_4:+59553454 | Msa0860670:CDS |
| AAGATTGATTTGATTAAATT+GGG | 0.348058 | 5_4:-59546635 | None:intergenic |
| GGCCTTCTGTTTCTTCTGCT+GGG | 0.359009 | 5_4:+59547245 | Msa0860670:CDS |
| GAAGTATTCTCTCTTGTGTT+TGG | 0.362711 | 5_4:-59554748 | None:intergenic |
| TTGCTGAGCTCAAAGCATTC+AGG | 0.362890 | 5_4:-59554439 | None:intergenic |
| AGATGCAGAGGCTGGATTGC+TGG | 0.366029 | 5_4:+59552932 | Msa0860670:CDS |
| AGAATTTGTATAGGCTGTTA+AGG | 0.371183 | 5_4:+59555632 | Msa0860670:three_prime_UTR |
| CTCGACTAGCCAGCATTAAA+CGG | 0.372614 | 5_4:+59552988 | Msa0860670:CDS |
| AAATTTGTCAGGAATTTATA+CGG | 0.374985 | 5_4:+59555434 | Msa0860670:intron |
| GTTACATAAGGCATGCAATT+CGG | 0.378982 | 5_4:+59553512 | Msa0860670:CDS |
| TGAAGGAAGACAAACTAGTT+TGG | 0.387629 | 5_4:+59549956 | Msa0860670:CDS |
| TTTACATCATGACCCTTTCA+AGG | 0.391924 | 5_4:-59555781 | None:intergenic |
| AAGAAATCTGGTCGTGGAAG+AGG | 0.396651 | 5_4:+59550008 | Msa0860670:CDS |
| TCGGAAATGTTGGTGTAATC+AGG | 0.407160 | 5_4:+59551683 | Msa0860670:CDS |
| TTCTTCACGTATGTGAGATA+TGG | 0.410766 | 5_4:-59555514 | None:intergenic |
| TATCATTTGGTTCAAAATAC+CGG | 0.415656 | 5_4:+59555728 | Msa0860670:three_prime_UTR |
| GCAAAACAAGGAAGTAATAG+AGG | 0.428335 | 5_4:-59546588 | None:intergenic |
| TCCAGCTTAGCAATCTTTGT+AGG | 0.431065 | 5_4:-59547172 | None:intergenic |
| TGAGTTGAATTGACCTTGAA+AGG | 0.431210 | 5_4:+59555768 | Msa0860670:three_prime_UTR |
| GCCTACAAAGATTGCTAAGC+TGG | 0.431869 | 5_4:+59547171 | Msa0860670:CDS |
| GACCCGCGTAAAGAAAATTA+GGG | 0.439923 | 5_4:-59546890 | None:intergenic |
| CAGGTTGATGTCTGGTCTGC+TGG | 0.447095 | 5_4:+59554677 | Msa0860670:intron |
| TTAGAAACAGTAGGTCTTGA+GGG | 0.452648 | 5_4:-59554809 | None:intergenic |
| TGAGCAATGGTCAATACATC+TGG | 0.458982 | 5_4:-59555487 | None:intergenic |
| TGAATCCTCCCTTTCCAAGA+AGG | 0.462463 | 5_4:-59553220 | None:intergenic |
| TCAACAGTTTCGGCTTCAAA+TGG | 0.466296 | 5_4:+59550095 | Msa0860670:CDS |
| GATGCAAATAGAAAGAAATC+TGG | 0.469408 | 5_4:+59549996 | Msa0860670:CDS |
| GGTCGTGGAAGAGGGAGTTC+TGG | 0.470919 | 5_4:+59550017 | Msa0860670:CDS |
| AGAAGAAGCAAAGTTACATA+AGG | 0.471355 | 5_4:+59553500 | Msa0860670:CDS |
| TGATAACGGCGCTTCATTAG+AGG | 0.472948 | 5_4:+59550280 | Msa0860670:CDS |
| TGGAGTAGCAGCTGAAGAAA+TGG | 0.476210 | 5_4:+59547276 | Msa0860670:CDS |
| TGAGACCTGGGAAGATGGTC+AGG | 0.479421 | 5_4:+59551805 | Msa0860670:CDS |
| ATATCTGTCAGAATTTGTAT+AGG | 0.482828 | 5_4:+59555623 | Msa0860670:three_prime_UTR |
| TGAAACTGATATCAGCAAAT+CGG | 0.484786 | 5_4:-59551608 | None:intergenic |
| ATCTCAAATGGGTGAGGGAA+AGG | 0.487636 | 5_4:+59555662 | Msa0860670:three_prime_UTR |
| CTTCTAAACCTTCTTGGAAA+GGG | 0.490597 | 5_4:+59553212 | Msa0860670:CDS |
| TCGACTAGCCAGCATTAAAC+GGG | 0.492390 | 5_4:+59552989 | Msa0860670:CDS |
| GCAACTTACCCGTTTAATGC+TGG | 0.500123 | 5_4:-59552997 | None:intergenic |
| GTGGAAAACAGGTTGATGTC+TGG | 0.502498 | 5_4:+59554669 | Msa0860670:intron |
| GTCGAATTCTTCGAACCAAT+CGG | 0.503177 | 5_4:+59547138 | Msa0860670:CDS |
| TCTTCTGCTGGGAAATTCAG+TGG | 0.504402 | 5_4:+59547256 | Msa0860670:CDS |
| TTCATGGTTTAAATGCTCAA+TGG | 0.506027 | 5_4:+59553470 | Msa0860670:CDS |
| AGCGGTGGAATCAAAAGCTT+GGG | 0.510930 | 5_4:-59546662 | None:intergenic |
| TTATCTGAGACCTGGGAAGA+TGG | 0.512235 | 5_4:+59551800 | Msa0860670:CDS |
| TGCAAAAGTTGTTCTGTTGG+AGG | 0.515190 | 5_4:+59550532 | Msa0860670:CDS |
| AGCAAGATTAAAAGTACGAC+AGG | 0.515934 | 5_4:+59551648 | Msa0860670:CDS |
| ATACATCTGGTCTCTCAGCC+TGG | 0.518193 | 5_4:-59555474 | None:intergenic |
| CTAAACCTTCTTGGAAAGGG+AGG | 0.518567 | 5_4:+59553215 | Msa0860670:CDS |
| TTTCTTATCTCAAATGGGTG+AGG | 0.520369 | 5_4:+59555656 | Msa0860670:three_prime_UTR |
| CTGCTTCTCAGCAACAAGGC+TGG | 0.523547 | 5_4:+59547224 | Msa0860670:CDS |
| TTTGCTGATATCAGTTTCAA+AGG | 0.526129 | 5_4:+59551612 | Msa0860670:CDS |
| CACAATTATTAAGGCACACA+AGG | 0.526376 | 5_4:+59554778 | Msa0860670:CDS |
| GAAGCTCGAATGGTGGGAAA+AGG | 0.526737 | 5_4:+59547193 | Msa0860670:CDS |
| TGCTAAGCTGGAAGCTCGAA+TGG | 0.526944 | 5_4:+59547183 | Msa0860670:CDS |
| TTCGAGATGAAGATGGTTCA+CGG | 0.527747 | 5_4:+59553153 | Msa0860670:CDS |
| GAGTTGAATTGACCTTGAAA+GGG | 0.528492 | 5_4:+59555769 | Msa0860670:three_prime_UTR |
| TCTGGTTCAAGCAGAGGTCG+TGG | 0.532569 | 5_4:+59550035 | Msa0860670:CDS |
| TTGAAAGGGTCATGATGTAA+AGG | 0.533395 | 5_4:+59555783 | Msa0860670:three_prime_UTR |
| GAAGGAATTGAAAGATCTTG+AGG | 0.533969 | 5_4:+59551279 | Msa0860670:CDS |
| GAGCGGTGGAATCAAAAGCT+TGG | 0.536019 | 5_4:-59546663 | None:intergenic |
| TACTGTTTCTAATGAGGCAA+AGG | 0.536433 | 5_4:+59554820 | Msa0860670:CDS |
| ACGTGCAAAAGTTGTTCTGT+TGG | 0.539996 | 5_4:+59550529 | Msa0860670:CDS |
| TTCTTATCTCAAATGGGTGA+GGG | 0.540094 | 5_4:+59555657 | Msa0860670:three_prime_UTR |
| AATCAGTTGAAGAAATGAAA+GGG | 0.540220 | 5_4:-59546834 | None:intergenic |
| GATGGAATAGATGCAGAGGC+TGG | 0.540764 | 5_4:+59552924 | Msa0860670:CDS |
| CCTTCTAAACCTTCTTGGAA+AGG | 0.541495 | 5_4:+59553211 | Msa0860670:CDS |
| TATCTGTCCACAGTTAGAAA+AGG | 0.541834 | 5_4:+59550598 | Msa0860670:CDS |
| ATGACCTTGGATGATATAAG+AGG | 0.545308 | 5_4:-59554466 | None:intergenic |
| TTGGCACATGTAGGAACTGA+AGG | 0.546431 | 5_4:+59551261 | Msa0860670:intron |
| TGAAGCATCATTGCAAAACA+AGG | 0.548529 | 5_4:-59546600 | None:intergenic |
| AACTGTCTTATCTGAGACCT+GGG | 0.549763 | 5_4:+59551793 | Msa0860670:CDS |
| CTAGGGTTTGTTAAGAGCGG+TGG | 0.551698 | 5_4:-59546677 | None:intergenic |
| AAGGGTCATGATGTAAAGGT+AGG | 0.555063 | 5_4:+59555787 | Msa0860670:three_prime_UTR |
| CTTTCCAAGAAGGTTTAGAA+GGG | 0.555578 | 5_4:-59553210 | None:intergenic |
| TGAGGAGCAAATGAAACCTA+AGG | 0.558555 | 5_4:+59551297 | Msa0860670:CDS |
| GAATCAGTTGAAGAAATGAA+AGG | 0.559765 | 5_4:-59546835 | None:intergenic |
| GAACTGTCTTATCTGAGACC+TGG | 0.560151 | 5_4:+59551792 | Msa0860670:CDS |
| GATCCGTTTCGTAATGATAA+CGG | 0.560945 | 5_4:+59550266 | Msa0860670:CDS |
| GGACCGCTACGAACTAGAGA+AGG | 0.561150 | 5_4:+59553103 | Msa0860670:CDS |
| CTATATCAGGTTGTTACTGA+AGG | 0.562321 | 5_4:+59549939 | Msa0860670:intron |
| TCATTGAGACTCGGAAATGT+TGG | 0.563510 | 5_4:+59551673 | Msa0860670:CDS |
| AGCAGTGATGTTCATTGACA+TGG | 0.565622 | 5_4:+59555536 | Msa0860670:exon |
| AGAAATCTGGTCGTGGAAGA+GGG | 0.567691 | 5_4:+59550009 | Msa0860670:CDS |
| AAGACCTACTGTTTCTAATG+AGG | 0.569301 | 5_4:+59554814 | Msa0860670:CDS |
| TAACGCCTGACCATCTTCCC+AGG | 0.569356 | 5_4:-59551810 | None:intergenic |
| ATTAGAAACAGTAGGTCTTG+AGG | 0.569928 | 5_4:-59554810 | None:intergenic |
| ATGCCTGAAGATAAGGGTGA+TGG | 0.570834 | 5_4:+59552906 | Msa0860670:intron |
| AAACGCATTCGAGATGAAGA+TGG | 0.573274 | 5_4:+59553146 | Msa0860670:CDS |
| GGGAGTTCTGGTTCAAGCAG+AGG | 0.577053 | 5_4:+59550029 | Msa0860670:CDS |
| TCTGGTCTGATCATTAGACT+TGG | 0.588575 | 5_4:-59550060 | None:intergenic |
| AATAGAAAGAAATCTGGTCG+TGG | 0.596379 | 5_4:+59550002 | Msa0860670:CDS |
| TCAACTGCTTCTCAGCAACA+AGG | 0.598864 | 5_4:+59547220 | Msa0860670:CDS |
| GACGCCTCTTATATCATCCA+AGG | 0.602777 | 5_4:+59554462 | Msa0860670:CDS |
| AAGCTGGAAGCTCGAATGGT+GGG | 0.602797 | 5_4:+59547187 | Msa0860670:CDS |
| CGACAGGACTCATTGAGACT+CGG | 0.604297 | 5_4:+59551664 | Msa0860670:CDS |
| TAGGCAGAGACTGATCCGAT+TGG | 0.604815 | 5_4:-59547153 | None:intergenic |
| GGTTTAGAAGGGCGTAACGA+TGG | 0.606514 | 5_4:-59553199 | None:intergenic |
| GAAACAACTACTCGAAACAA+AGG | 0.609976 | 5_4:+59552449 | Msa0860670:intron |
| GCGCCGTTATCATTACGAAA+CGG | 0.614432 | 5_4:-59550269 | None:intergenic |
| ACATCATCGTTATCATCGTG+AGG | 0.615437 | 5_4:-59549658 | None:intergenic |
| TGTGTTTGGTCATGTCCGAA+AGG | 0.620138 | 5_4:-59554734 | None:intergenic |
| CTTTCTATTCCAGAATGGTG+CGG | 0.623023 | 5_4:+59549597 | Msa0860670:intron |
| GCGGTGTCTGACATATAACC+AGG | 0.625596 | 5_4:+59555456 | Msa0860670:CDS |
| AAAGAGGAGACATACAAGCT+GGG | 0.632339 | 5_4:-59551846 | None:intergenic |
| TCAGAATCACTTGAACTGCA+AGG | 0.632922 | 5_4:-59547304 | None:intergenic |
| AGTCTAGGGTTTGTTAAGAG+CGG | 0.633494 | 5_4:-59546680 | None:intergenic |
| TGGGTGTGTTGATGTTGTGA+AGG | 0.634472 | 5_4:-59546796 | None:intergenic |
| AAAACAGTTTGCAGTTACAG+AGG | 0.635054 | 5_4:+59547081 | Msa0860670:intron |
| AGTTACAGAGGCAACAATGT+CGG | 0.639501 | 5_4:+59547093 | Msa0860670:intron |
| TTCCCTTCTCTAGTTCGTAG+CGG | 0.644251 | 5_4:-59553106 | None:intergenic |
| CTGAGCTCAAAGCATTCAGG+AGG | 0.645161 | 5_4:-59554436 | None:intergenic |
| TAAGCTGGAAGCTCGAATGG+TGG | 0.646010 | 5_4:+59547186 | Msa0860670:CDS |
| GACCGCTACGAACTAGAGAA+GGG | 0.647954 | 5_4:+59553104 | Msa0860670:CDS |
| TTTGCCTCATTAGAAACAGT+AGG | 0.648415 | 5_4:-59554818 | None:intergenic |
| GGGTGATGGAATAGATGCAG+AGG | 0.649260 | 5_4:+59552920 | Msa0860670:CDS |
| GGTGGAATCAAAAGCTTGGG+AGG | 0.653824 | 5_4:-59546659 | None:intergenic |
| GTGGAATCAAAAGCTTGGGA+GGG | 0.655241 | 5_4:-59546658 | None:intergenic |
| TTCCCAGCAGAAGAAACAGA+AGG | 0.656950 | 5_4:-59547247 | None:intergenic |
| ACAACTACTCGAAACAAAGG+AGG | 0.687624 | 5_4:+59552452 | Msa0860670:CDS |
| ACAGATATTCTGATGCTGAG+AGG | 0.691242 | 5_4:-59550582 | None:intergenic |
| GGAAGATATTCTCATTCACG+AGG | 0.697452 | 5_4:+59552953 | Msa0860670:CDS |
| GAGATATGGATCTTGAGCAA+TGG | 0.716451 | 5_4:-59555500 | None:intergenic |
| TTTGTCAGGAATTTATACGG+CGG | 0.750523 | 5_4:+59555437 | Msa0860670:intron |
| TGGAAAGGGAGGATTCAGCG+AGG | 0.790703 | 5_4:+59553226 | Msa0860670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTAATTT+AGG | + | chr5_4:59547690-59547709 | Msa0860670:intron | 0.0% |
| !!! | TTTTTATAATATTTTTATTT+AGG | + | chr5_4:59551733-59551752 | Msa0860670:intron | 0.0% |
| !!! | ATTGTAATTTTGAAAATTTA+AGG | - | chr5_4:59547920-59547939 | None:intergenic | 10.0% |
| !!! | AATTATTTTCTTTCATTTAT+AGG | - | chr5_4:59550744-59550763 | None:intergenic | 10.0% |
| !! | ATTCAATAAATAAATATGAA+AGG | - | chr5_4:59551876-59551895 | None:intergenic | 10.0% |
| !! | TAATATAAATAAATGAACAA+TGG | - | chr5_4:59554897-59554916 | None:intergenic | 10.0% |
| !!! | AAGATTGATTTGATTAAATT+GGG | - | chr5_4:59546638-59546657 | None:intergenic | 15.0% |
| !! | TTACTTATTTGATAAATGAT+AGG | + | chr5_4:59547404-59547423 | Msa0860670:intron | 15.0% |
| !! | TACTTATTTGATAAATGATA+GGG | + | chr5_4:59547405-59547424 | Msa0860670:intron | 15.0% |
| !! | CAACTAACAAAATATATATT+TGG | - | chr5_4:59548734-59548753 | None:intergenic | 15.0% |
| !!! | CAAATATATATTTTGTTAGT+TGG | + | chr5_4:59548732-59548751 | Msa0860670:intron | 15.0% |
| !!! | ATTGTAATTTTGAAAATTCA+AGG | - | chr5_4:59549173-59549192 | None:intergenic | 15.0% |
| !!! | TATTTTTGTATTTTCATTGT+TGG | + | chr5_4:59549451-59549470 | Msa0860670:intron | 15.0% |
| !!! | TCATTAAGCAATAAATTTTA+TGG | + | chr5_4:59550167-59550186 | Msa0860670:intron | 15.0% |
| !! | TTTCATCTTTGTATTAAATT+AGG | + | chr5_4:59550490-59550509 | Msa0860670:intron | 15.0% |
| !!! | TTATTGTCATTTTTTAGTTT+GGG | - | chr5_4:59550870-59550889 | None:intergenic | 15.0% |
| !!! | ATTATTGTCATTTTTTAGTT+TGG | - | chr5_4:59550871-59550890 | None:intergenic | 15.0% |
| !! | AAATTGTAAATACGTATTAA+AGG | + | chr5_4:59551177-59551196 | Msa0860670:intron | 15.0% |
| !!! | TTATTTTTATCTTTTGATTG+TGG | + | chr5_4:59551325-59551344 | Msa0860670:intron | 15.0% |
| !!! | TCATTTAAAATATAATGAAG+TGG | + | chr5_4:59551402-59551421 | Msa0860670:intron | 15.0% |
| !!! | TTTTATTTAGGTTTTCTTAT+TGG | + | chr5_4:59551745-59551764 | Msa0860670:intron | 15.0% |
| !!! | GATGAATAAATACAATTTTA+AGG | + | chr5_4:59552244-59552263 | Msa0860670:intron | 15.0% |
| !!! | AATAAATACAATTTTAAGGA+TGG | + | chr5_4:59552248-59552267 | Msa0860670:intron | 15.0% |
| !! | TATAAATAAGTAAATAGTGA+AGG | - | chr5_4:59552731-59552750 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATAATGACCT+TGG | - | chr5_4:59554482-59554501 | None:intergenic | 15.0% |
| !! | TATATTATTCTATTATTCAG+TGG | + | chr5_4:59554910-59554929 | Msa0860670:intron | 15.0% |
| !!! | GAAGATTGATTTGATTAAAT+TGG | - | chr5_4:59546639-59546658 | None:intergenic | 20.0% |
| !!! | CAAAGAATTAATTGATTTTG+TGG | - | chr5_4:59546750-59546769 | None:intergenic | 20.0% |
| !!! | TTTTGTGGAAATTATGAAAT+GGG | - | chr5_4:59546870-59546889 | None:intergenic | 20.0% |
| !! | ACTAACGAAATATATATTTG+GGG | - | chr5_4:59547565-59547584 | None:intergenic | 20.0% |
| !! | GACTAACGAAATATATATTT+GGG | - | chr5_4:59547566-59547585 | None:intergenic | 20.0% |
| !! | TGACTAACGAAATATATATT+TGG | - | chr5_4:59547567-59547586 | None:intergenic | 20.0% |
| !! | TTTATAGCTCAAATGAAAAA+TGG | + | chr5_4:59548202-59548221 | Msa0860670:intron | 20.0% |
| !! | AGGATATATTCTGTATATAA+TGG | - | chr5_4:59548305-59548324 | None:intergenic | 20.0% |
| !! | ATGAAGTAAAAAAAAATGTC+AGG | - | chr5_4:59548325-59548344 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTTCGTTTTGT+TGG | + | chr5_4:59549081-59549100 | Msa0860670:intron | 20.0% |
| !!! | TAATTTTGAAAATTCAAGGA+TGG | - | chr5_4:59549169-59549188 | None:intergenic | 20.0% |
| !! | TTATAAATTTGATACAGTCA+AGG | + | chr5_4:59549320-59549339 | Msa0860670:intron | 20.0% |
| !! | CTTCATTATTTATCTGTTTA+TGG | + | chr5_4:59549403-59549422 | Msa0860670:intron | 20.0% |
| !!! | GTATTTTATTGTTGATTATC+TGG | + | chr5_4:59549506-59549525 | Msa0860670:intron | 20.0% |
| !! | GATTATCTGGAAAATATAAA+TGG | + | chr5_4:59549519-59549538 | Msa0860670:intron | 20.0% |
| !! | AGAAAGAAATATGAAGATAA+GGG | - | chr5_4:59549583-59549602 | None:intergenic | 20.0% |
| !! | TAGAAAGAAATATGAAGATA+AGG | - | chr5_4:59549584-59549603 | None:intergenic | 20.0% |
| !! | TAATGAACCAAATATTTGAT+GGG | - | chr5_4:59550153-59550172 | None:intergenic | 20.0% |
| !! | TTAATGAACCAAATATTTGA+TGG | - | chr5_4:59550154-59550173 | None:intergenic | 20.0% |
| !! | CATTAATAATGAATCATACA+CGG | + | chr5_4:59550810-59550829 | Msa0860670:intron | 20.0% |
| !! | CTATAAATTCAATTAGCAAA+TGG | - | chr5_4:59551031-59551050 | None:intergenic | 20.0% |
| !!! | TGTAAATATGCTTTTATGAA+TGG | + | chr5_4:59551056-59551075 | Msa0860670:intron | 20.0% |
| !! | CTATAAATTCAATTAGCAAA+TGG | - | chr5_4:59551031-59551050 | None:intergenic | 20.0% |
| !! | ATTAAAGGTAATAGAATTGA+CGG | + | chr5_4:59551192-59551211 | Msa0860670:intron | 20.0% |
| !!! | TTTAAAATATAATGAAGTGG+TGG | + | chr5_4:59551405-59551424 | Msa0860670:intron | 20.0% |
| !!! | ATGAACTAGAAATTTTAAAG+AGG | + | chr5_4:59551466-59551485 | Msa0860670:intron | 20.0% |
| !!! | TATTATATGAATTTTAGAGC+TGG | + | chr5_4:59551770-59551789 | Msa0860670:intron | 20.0% |
| !! | ATCATACTTATAAATACCAT+TGG | - | chr5_4:59551909-59551928 | None:intergenic | 20.0% |
| !!! | AGTGTTTAACTATTTTGAAT+AGG | - | chr5_4:59551977-59551996 | None:intergenic | 20.0% |
| !!! | TATATTTACGTGTTTCATTT+TGG | + | chr5_4:59552138-59552157 | Msa0860670:intron | 20.0% |
| !! | ATTCTAAATATCATCAAACA+AGG | + | chr5_4:59552199-59552218 | Msa0860670:intron | 20.0% |
| !! | TTCTAAATATCATCAAACAA+GGG | + | chr5_4:59552200-59552219 | Msa0860670:intron | 20.0% |
| !!! | GTGGTTTTTTTATTTTCAAT+TGG | + | chr5_4:59552361-59552380 | Msa0860670:intron | 20.0% |
| !! | TTATTCAAGAAAAAACAATC+TGG | + | chr5_4:59552495-59552514 | Msa0860670:CDS | 20.0% |
| !! | ATGTTAGTTATAATGACAAT+TGG | - | chr5_4:59552644-59552663 | None:intergenic | 20.0% |
| !! | ATTATAACTAACATATACCT+TGG | + | chr5_4:59552650-59552669 | Msa0860670:intron | 20.0% |
| !! | ATACAATAAATATCTGTTTC+AGG | + | chr5_4:59552797-59552816 | Msa0860670:intron | 20.0% |
| !! | AATTTAGCGAATATTATACA+AGG | + | chr5_4:59553304-59553323 | Msa0860670:intron | 20.0% |
| !! | TATTTACATTTGCCAATAAA+AGG | - | chr5_4:59553368-59553387 | None:intergenic | 20.0% |
| !!! | CTCTTTTATTCATGTAAATA+AGG | - | chr5_4:59554124-59554143 | None:intergenic | 20.0% |
| !!! | ATTTCGTTTTAACATAAGTT+TGG | + | chr5_4:59554572-59554591 | Msa0860670:intron | 20.0% |
| !!! | GCAATAATATAATCTAAAAC+AGG | - | chr5_4:59554948-59554967 | None:intergenic | 20.0% |
| !!! | TCAAACCATTAACATTTTAA+TGG | - | chr5_4:59555057-59555076 | None:intergenic | 20.0% |
| !! | GAACCATAATAATATTTCTT+AGG | + | chr5_4:59555174-59555193 | Msa0860670:intron | 20.0% |
| !! | ATGCCTAAGAAATATTATTA+TGG | - | chr5_4:59555180-59555199 | None:intergenic | 20.0% |
| !! | GCGAAATTATATTTATTGAT+TGG | - | chr5_4:59555301-59555320 | None:intergenic | 20.0% |
| !! | AAATTTGTCAGGAATTTATA+CGG | + | chr5_4:59555434-59555453 | Msa0860670:intron | 20.0% |
| !!! | ACAATAATTCCTTTTAGAAT+GGG | - | chr5_4:59555694-59555713 | None:intergenic | 20.0% |
| !!! | AACAATAATTCCTTTTAGAA+TGG | - | chr5_4:59555695-59555714 | None:intergenic | 20.0% |
| !! | TGCATTATAATCCAATAATT+TGG | - | chr5_4:59555851-59555870 | None:intergenic | 20.0% |
| !! | TGAAGGAAAGTGAAAATTTT+GGG | - | chr5_4:59546782-59546801 | None:intergenic | 25.0% |
| ! | AATCAGTTGAAGAAATGAAA+GGG | - | chr5_4:59546837-59546856 | None:intergenic | 25.0% |
| !! | GTTTTGTGGAAATTATGAAA+TGG | - | chr5_4:59546871-59546890 | None:intergenic | 25.0% |
| !! | TAAAGAAAATTAGGGTTTTG+TGG | - | chr5_4:59546885-59546904 | None:intergenic | 25.0% |
| !! | AATGAAAAAAACGAGTTTTG+AGG | - | chr5_4:59546971-59546990 | None:intergenic | 25.0% |
| !!! | AGAAACGATTTTTTCTCAAA+AGG | + | chr5_4:59546993-59547012 | Msa0860670:intron | 25.0% |
| !!! | GAAACGATTTTTTCTCAAAA+GGG | + | chr5_4:59546994-59547013 | Msa0860670:intron | 25.0% |
| ! | TTATCGAGTATATAGTTATC+TGG | + | chr5_4:59547478-59547497 | Msa0860670:intron | 25.0% |
| ! | TATCGAGTATATAGTTATCT+GGG | + | chr5_4:59547479-59547498 | Msa0860670:intron | 25.0% |
| !! | ACTTTTGATACATTCAAAGA+CGG | - | chr5_4:59547533-59547552 | None:intergenic | 25.0% |
| !!! | GAGCTAGATATTTTTTTTGA+AGG | + | chr5_4:59548113-59548132 | Msa0860670:intron | 25.0% |
| ! | TCAAGTTATAACTGTTCAAA+TGG | + | chr5_4:59548249-59548268 | Msa0860670:intron | 25.0% |
| !! | CTGTATATAATGGAAAAATG+TGG | - | chr5_4:59548295-59548314 | None:intergenic | 25.0% |
| !! | AAAAAAATTGCTTTGGGTTA+GGG | - | chr5_4:59548483-59548502 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGCTTT+GGG | - | chr5_4:59548489-59548508 | None:intergenic | 25.0% |
| ! | AAAAGGGAAAAAAATTGCTT+TGG | - | chr5_4:59548490-59548509 | None:intergenic | 25.0% |
| !!! | TTTGTCTATTGTTGTTTTGT+TGG | + | chr5_4:59548606-59548625 | Msa0860670:intron | 25.0% |
| !!! | ATGTCTTTTGTTTGTGAATA+TGG | + | chr5_4:59549243-59549262 | Msa0860670:intron | 25.0% |
| ! | TATTTCTTTCTATTCCAGAA+TGG | + | chr5_4:59549592-59549611 | Msa0860670:intron | 25.0% |
| ! | AAAATACTAGTAACAGAAGA+TGG | - | chr5_4:59549837-59549856 | None:intergenic | 25.0% |
| ! | TATAGAGATAGTTATTCAGT+TGG | - | chr5_4:59549924-59549943 | None:intergenic | 25.0% |
| ! | TGAATAACTATCTCTATATC+AGG | + | chr5_4:59549926-59549945 | Msa0860670:intron | 25.0% |
| ! | ACAAATTTCTTCAACAGTTT+CGG | + | chr5_4:59550085-59550104 | Msa0860670:CDS | 25.0% |
| ! | CATCTTTGTATTAAATTAGG+AGG | + | chr5_4:59550493-59550512 | Msa0860670:intron | 25.0% |
| ! | AGTTCCATTGAGTAAAATTT+GGG | - | chr5_4:59550782-59550801 | None:intergenic | 25.0% |
| ! | AAGTTCCATTGAGTAAAATT+TGG | - | chr5_4:59550783-59550802 | None:intergenic | 25.0% |
| ! | TCTCAGATTCAACAAAATTT+AGG | + | chr5_4:59550843-59550862 | Msa0860670:intron | 25.0% |
| ! | CTCAGATTCAACAAAATTTA+GGG | + | chr5_4:59550844-59550863 | Msa0860670:intron | 25.0% |
| ! | TACACTGTATTTCTTATAGA+AGG | + | chr5_4:59550892-59550911 | Msa0860670:intron | 25.0% |
| !!! | GTTCTTCTAATGTTTGATTT+TGG | + | chr5_4:59551242-59551261 | Msa0860670:intron | 25.0% |
| ! | GATAAAAATAATCGAACCTT+AGG | - | chr5_4:59551316-59551335 | None:intergenic | 25.0% |
| ! | TCTTACTCCAAAATAAGTTA+AGG | + | chr5_4:59551498-59551517 | Msa0860670:intron | 25.0% |
| ! | GTATAAAAATTAAGCTAAGC+CGG | + | chr5_4:59551538-59551557 | Msa0860670:intron | 25.0% |
| ! | TTTGTTCTCTACAAAATTCA+AGG | - | chr5_4:59551580-59551599 | None:intergenic | 25.0% |
| ! | AAATATGAAAGGAAAGAAAG+AGG | - | chr5_4:59551865-59551884 | None:intergenic | 25.0% |
| ! | TTGAATTTATTATGCACCAA+TGG | + | chr5_4:59551890-59551909 | Msa0860670:intron | 25.0% |
| !! | TTTTCCTTTTCAGTACTATT+AGG | + | chr5_4:59552291-59552310 | Msa0860670:intron | 25.0% |
| !!! | ATGTTTCTATAACTTTTCTG+TGG | + | chr5_4:59552339-59552358 | Msa0860670:intron | 25.0% |
| ! | AAACAAATTACATAGTGTTC+CGG | - | chr5_4:59552691-59552710 | None:intergenic | 25.0% |
| !!! | GGTTTGAATTTTGTTTTTCT+TGG | + | chr5_4:59552874-59552893 | Msa0860670:intron | 25.0% |
| ! | TAAAGAGGAAATAGAATAAG+CGG | - | chr5_4:59553030-59553049 | None:intergenic | 25.0% |
| ! | TTATCTTCATAAAACAGATG+AGG | - | chr5_4:59553653-59553672 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAGTTATTC+TGG | - | chr5_4:59553821-59553840 | None:intergenic | 25.0% |
| ! | ACAATATTTATGAGCATGTT+TGG | - | chr5_4:59553957-59553976 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTCAGATTTTCCA+AGG | + | chr5_4:59554098-59554117 | Msa0860670:intron | 25.0% |
| !! | AAGTTTAAAACCAACAAGTT+TGG | - | chr5_4:59554351-59554370 | None:intergenic | 25.0% |
| ! | GCAAATCAAAAATGAAAGAA+AGG | - | chr5_4:59554407-59554426 | None:intergenic | 25.0% |
| !!! | TTCTTTCATTTTTGATTTGC+AGG | + | chr5_4:59554407-59554426 | Msa0860670:intron | 25.0% |
| ! | TAAGATAATTATCCAACACT+TGG | - | chr5_4:59554621-59554640 | None:intergenic | 25.0% |
| !!! | TTGTTTTATCAAATGCTCTT+TGG | + | chr5_4:59554704-59554723 | Msa0860670:CDS | 25.0% |
| ! | CAATGCCATTAAAATGTTAA+TGG | + | chr5_4:59555049-59555068 | Msa0860670:intron | 25.0% |
| ! | ATATCTGTCAGAATTTGTAT+AGG | + | chr5_4:59555623-59555642 | Msa0860670:three_prime_UTR | 25.0% |
| !! | TAAGGTTTTCTTATCTCAAA+TGG | + | chr5_4:59555650-59555669 | Msa0860670:three_prime_UTR | 25.0% |
| !! | AAGGTTTTCTTATCTCAAAT+GGG | + | chr5_4:59555651-59555670 | Msa0860670:three_prime_UTR | 25.0% |
| ! | TTCTTCATGCATTTATCATT+TGG | + | chr5_4:59555715-59555734 | Msa0860670:three_prime_UTR | 25.0% |
| !! | TATCATTTGGTTCAAAATAC+CGG | + | chr5_4:59555728-59555747 | Msa0860670:three_prime_UTR | 25.0% |
| ! | GTGAAGGAAAGTGAAAATTT+TGG | - | chr5_4:59546783-59546802 | None:intergenic | 30.0% |
| AGGGTCAAAAAATTTACGAT+GGG | - | chr5_4:59546818-59546837 | None:intergenic | 30.0% | |
| AAGGGTCAAAAAATTTACGA+TGG | - | chr5_4:59546819-59546838 | None:intergenic | 30.0% | |
| GAATCAGTTGAAGAAATGAA+AGG | - | chr5_4:59546838-59546857 | None:intergenic | 30.0% | |
| ! | AAACCCTAATTTTCTTTACG+CGG | + | chr5_4:59546887-59546906 | Msa0860670:five_prime_UTR | 30.0% |
| ATTCGTGATCAAAGAGAAAA+AGG | - | chr5_4:59546931-59546950 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTTTGATCACGAA+TGG | + | chr5_4:59546930-59546949 | Msa0860670:exon | 30.0% |
| ! | TTTTCTCTTTGATCACGAAT+GGG | + | chr5_4:59546931-59546950 | Msa0860670:exon | 30.0% |
| TTACGAGGTTATTGTGATTA+TGG | + | chr5_4:59547024-59547043 | Msa0860670:intron | 30.0% | |
| ! | AGTGTTTTTCTTAGTCAGTT+TGG | + | chr5_4:59547601-59547620 | Msa0860670:intron | 30.0% |
| GTGTACATTGTACATTTATG+AGG | + | chr5_4:59547755-59547774 | Msa0860670:intron | 30.0% | |
| !!! | TCAATGCTGATTTGTTTTGT+TGG | + | chr5_4:59547827-59547846 | Msa0860670:intron | 30.0% |
| TTATCGAGTAAATAGCCATT+TGG | + | chr5_4:59547862-59547881 | Msa0860670:intron | 30.0% | |
| TATCGAGTAAATAGCCATTT+GGG | + | chr5_4:59547863-59547882 | Msa0860670:intron | 30.0% | |
| AACAACGTTCGATATATTCA+TGG | - | chr5_4:59547890-59547909 | None:intergenic | 30.0% | |
| ! | ACGTGAAATTTTTGAACTCT+AGG | + | chr5_4:59548082-59548101 | Msa0860670:intron | 30.0% |
| !!! | TAGTGTGTTTTTTTCCGTTA+TGG | + | chr5_4:59548383-59548402 | Msa0860670:intron | 30.0% |
| ! | GTATTTTCAATGAGTTCGTA+TGG | + | chr5_4:59548426-59548445 | Msa0860670:intron | 30.0% |
| ! | GAAAAAAATTGCTTTGGGTT+AGG | - | chr5_4:59548484-59548503 | None:intergenic | 30.0% |
| ! | TTTTTCCCTTTTTATCTGCA+AGG | + | chr5_4:59548498-59548517 | Msa0860670:intron | 30.0% |
| TCAAACCTTGCAGATAAAAA+GGG | - | chr5_4:59548506-59548525 | None:intergenic | 30.0% | |
| ATCAAACCTTGCAGATAAAA+AGG | - | chr5_4:59548507-59548526 | None:intergenic | 30.0% | |
| ! | TTTTTATCTGCAAGGTTTGA+TGG | + | chr5_4:59548506-59548525 | Msa0860670:intron | 30.0% |
| TGCTCATTTATTTGTAGTGA+TGG | + | chr5_4:59548556-59548575 | Msa0860670:intron | 30.0% | |
| GCTCATTTATTTGTAGTGAT+GGG | + | chr5_4:59548557-59548576 | Msa0860670:intron | 30.0% | |
| CTCATTTATTTGTAGTGATG+GGG | + | chr5_4:59548558-59548577 | Msa0860670:intron | 30.0% | |
| TTGATACATTCAAACGAAGA+TGG | - | chr5_4:59548695-59548714 | None:intergenic | 30.0% | |
| !! | GTGTCGTTTGTTAATAAGTT+AGG | + | chr5_4:59548769-59548788 | Msa0860670:intron | 30.0% |
| TTTGAGTGTATGCATTTATG+AGG | + | chr5_4:59548977-59548996 | Msa0860670:intron | 30.0% | |
| TTATTGAGTAAATAGCCATC+TGG | + | chr5_4:59549116-59549135 | Msa0860670:intron | 30.0% | |
| TATTGAGTAAATAGCCATCT+GGG | + | chr5_4:59549117-59549136 | Msa0860670:intron | 30.0% | |
| CCAAACGAAAGATATATTTG+GGG | - | chr5_4:59549206-59549225 | None:intergenic | 30.0% | |
| GCCAAACGAAAGATATATTT+GGG | - | chr5_4:59549207-59549226 | None:intergenic | 30.0% | |
| ACAAACAAAAGACATGTTTG+AGG | - | chr5_4:59549238-59549257 | None:intergenic | 30.0% | |
| ! | CAAAGAGTAAACAGTCATTT+TGG | - | chr5_4:59549378-59549397 | None:intergenic | 30.0% |
| TTTGATATTATAAGCGCATG+CGG | + | chr5_4:59549428-59549447 | Msa0860670:intron | 30.0% | |
| !!! | TGCTGAGGTTTGTTTTTATA+TGG | + | chr5_4:59549690-59549709 | Msa0860670:intron | 30.0% |
| !!! | TGAGGTTTGTTTTTATATGG+TGG | + | chr5_4:59549693-59549712 | Msa0860670:intron | 30.0% |
| ACTTCAACAATTGTAAGAAG+TGG | + | chr5_4:59549861-59549880 | Msa0860670:intron | 30.0% | |
| AGATAGTTATTCAGTTGGAA+TGG | - | chr5_4:59549919-59549938 | None:intergenic | 30.0% | |
| GATGCAAATAGAAAGAAATC+TGG | + | chr5_4:59549996-59550015 | Msa0860670:CDS | 30.0% | |
| TGTTGAAGAAATTTGTGTTC+TGG | - | chr5_4:59550081-59550100 | None:intergenic | 30.0% | |
| GTTACTTCCCATCAAATATT+TGG | + | chr5_4:59550143-59550162 | Msa0860670:intron | 30.0% | |
| !!! | GAACTCATTTTTTTGTTTGC+AGG | + | chr5_4:59550229-59550248 | Msa0860670:intron | 30.0% |
| !!! | TCATTTTTTTGTTTGCAGGA+TGG | + | chr5_4:59550233-59550252 | Msa0860670:intron | 30.0% |
| !!! | TTTTAAGGCAAGTAGAAGAA+AGG | + | chr5_4:59550340-59550359 | Msa0860670:intron | 30.0% |
| ! | TTTAAGGCAAGTAGAAGAAA+GGG | + | chr5_4:59550341-59550360 | Msa0860670:intron | 30.0% |
| AATGTCATTGAGATATGTTG+GGG | - | chr5_4:59550423-59550442 | None:intergenic | 30.0% | |
| CAATGTCATTGAGATATGTT+GGG | - | chr5_4:59550424-59550443 | None:intergenic | 30.0% | |
| ! | TCATATACCTTTTCTAACTG+TGG | - | chr5_4:59550608-59550627 | None:intergenic | 30.0% |
| ! | TTCTCCCAAATTTTACTCAA+TGG | + | chr5_4:59550775-59550794 | Msa0860670:intron | 30.0% |
| GGTTGTTGAATTTAATGTGA+TGG | + | chr5_4:59551213-59551232 | Msa0860670:intron | 30.0% | |
| TAAATGACATGTATCCCAAT+AGG | - | chr5_4:59551389-59551408 | None:intergenic | 30.0% | |
| ! | CAATGCTCCTTAACTTATTT+TGG | - | chr5_4:59551508-59551527 | None:intergenic | 30.0% |
| TGAAACTGATATCAGCAAAT+CGG | - | chr5_4:59551611-59551630 | None:intergenic | 30.0% | |
| TTTGCTGATATCAGTTTCAA+AGG | + | chr5_4:59551612-59551631 | Msa0860670:CDS | 30.0% | |
| AAAATGCATATGTCAAGCAT+TGG | - | chr5_4:59552025-59552044 | None:intergenic | 30.0% | |
| !! | GTGTTTCATTTTGGTAACAA+TGG | + | chr5_4:59552147-59552166 | Msa0860670:intron | 30.0% |
| !! | TTTTGGTAACAATGGTCTTA+TGG | + | chr5_4:59552155-59552174 | Msa0860670:intron | 30.0% |
| !! | TTTGGTAACAATGGTCTTAT+GGG | + | chr5_4:59552156-59552175 | Msa0860670:intron | 30.0% |
| TCAATCCAACAAAAGCAAAA+AGG | - | chr5_4:59552226-59552245 | None:intergenic | 30.0% | |
| ! | AATGCCTAATAGTACTGAAA+AGG | - | chr5_4:59552298-59552317 | None:intergenic | 30.0% |
| ! | TTTCTATAACTTTTCTGTGG+TGG | + | chr5_4:59552342-59552361 | Msa0860670:intron | 30.0% |
| CAAACTACTGATATATGCAA+TGG | - | chr5_4:59552389-59552408 | None:intergenic | 30.0% | |
| AAACTACAAATGAAGGGAAA+GGG | - | chr5_4:59552618-59552637 | None:intergenic | 30.0% | |
| TGGTACAAACTACAAATGAA+GGG | - | chr5_4:59552624-59552643 | None:intergenic | 30.0% | |
| TTGGTACAAACTACAAATGA+AGG | - | chr5_4:59552625-59552644 | None:intergenic | 30.0% | |
| TAACTAACATATACCTTGGT+TGG | + | chr5_4:59552654-59552673 | Msa0860670:intron | 30.0% | |
| TTGGTTGGATCATAATAAAC+CGG | + | chr5_4:59552669-59552688 | Msa0860670:intron | 30.0% | |
| TTATTCTGCTCACTTTCTAA+TGG | + | chr5_4:59552853-59552872 | Msa0860670:intron | 30.0% | |
| TACTTCAAATCACTGCAAAA+AGG | - | chr5_4:59553395-59553414 | None:intergenic | 30.0% | |
| TGAAGTAAAAAATTTCCAGC+AGG | + | chr5_4:59553408-59553427 | Msa0860670:intron | 30.0% | |
| TTCATGGTTTAAATGCTCAA+TGG | + | chr5_4:59553470-59553489 | Msa0860670:CDS | 30.0% | |
| AGAAGAAGCAAAGTTACATA+AGG | + | chr5_4:59553500-59553519 | Msa0860670:CDS | 30.0% | |
| GTATAATATTCACAAGACCT+TGG | + | chr5_4:59553537-59553556 | Msa0860670:intron | 30.0% | |
| ATAAACGAACAATATGACGA+TGG | - | chr5_4:59553564-59553583 | None:intergenic | 30.0% | |
| ATCGTCATATTGTTCGTTTA+TGG | + | chr5_4:59553563-59553582 | Msa0860670:intron | 30.0% | |
| TCGTCATATTGTTCGTTTAT+GGG | + | chr5_4:59553564-59553583 | Msa0860670:intron | 30.0% | |
| ! | TTGACTTTTGTGATAGACTA+TGG | + | chr5_4:59553681-59553700 | Msa0860670:intron | 30.0% |
| ! | TGACTTTTGTGATAGACTAT+GGG | + | chr5_4:59553682-59553701 | Msa0860670:intron | 30.0% |
| ACAGCTTATTAACATGTCAT+AGG | - | chr5_4:59553774-59553793 | None:intergenic | 30.0% | |
| TATTCATGTAAATAAGGCCT+TGG | - | chr5_4:59554118-59554137 | None:intergenic | 30.0% | |
| ! | ATCCATTATGATTTAAAGCC+TGG | + | chr5_4:59554155-59554174 | Msa0860670:intron | 30.0% |
| !! | TTCCAGGCTTTAAATCATAA+TGG | - | chr5_4:59554160-59554179 | None:intergenic | 30.0% |
| TCATCAAACAAAACATTTCC+AGG | - | chr5_4:59554176-59554195 | None:intergenic | 30.0% | |
| !!! | AATGTTTTGTTTGATGAGCT+TGG | + | chr5_4:59554179-59554198 | Msa0860670:intron | 30.0% |
| !!! | TTTTTTAAGTCGTGAATGCA+TGG | + | chr5_4:59554497-59554516 | Msa0860670:intron | 30.0% |
| ! | ATCTCAATTGTCAGTCATTT+TGG | + | chr5_4:59554540-59554559 | Msa0860670:intron | 30.0% |
| !! | TAACATAAGTTTGGTGATGT+CGG | + | chr5_4:59554581-59554600 | Msa0860670:intron | 30.0% |
| TCGTGAAGACACAATTATTA+AGG | + | chr5_4:59554769-59554788 | Msa0860670:CDS | 30.0% | |
| TTGCAGCAATGAGAAAATAT+TGG | + | chr5_4:59555091-59555110 | Msa0860670:intron | 30.0% | |
| !! | AAGTACAGGTATTTTGGATT+TGG | - | chr5_4:59555364-59555383 | None:intergenic | 30.0% |
| CAAGTTTCAGTGATATTTGT+AGG | - | chr5_4:59555391-59555410 | None:intergenic | 30.0% | |
| AGAATTTGTATAGGCTGTTA+AGG | + | chr5_4:59555632-59555651 | Msa0860670:three_prime_UTR | 30.0% | |
| ! | AGGATTTTTCCCATTCTAAA+AGG | + | chr5_4:59555682-59555701 | Msa0860670:three_prime_UTR | 30.0% |
| ! | CTACATTCTCTTTTCATTTG+TGG | + | chr5_4:59555881-59555900 | Msa0860670:three_prime_UTR | 30.0% |
| GCAAAACAAGGAAGTAATAG+AGG | - | chr5_4:59546591-59546610 | None:intergenic | 35.0% | |
| ! | TGAAGCATCATTGCAAAACA+AGG | - | chr5_4:59546603-59546622 | None:intergenic | 35.0% |
| ! | AACCCTAATTTTCTTTACGC+GGG | + | chr5_4:59546888-59546907 | Msa0860670:five_prime_UTR | 35.0% |
| !!! | AACGAGTTTTGAGGTGAATT+TGG | - | chr5_4:59546962-59546981 | None:intergenic | 35.0% |
| ! | CAAAAGGGTTGAATTTTACG+AGG | + | chr5_4:59547009-59547028 | Msa0860670:intron | 35.0% |
| AAAACAGTTTGCAGTTACAG+AGG | + | chr5_4:59547081-59547100 | Msa0860670:intron | 35.0% | |
| !!! | GGGATTTTCAATGCTGATTT+AGG | + | chr5_4:59547425-59547444 | Msa0860670:intron | 35.0% |
| GATATATTCATGGACCCAAA+TGG | - | chr5_4:59547880-59547899 | None:intergenic | 35.0% | |
| TCCCCAAATATATCTTTCGT+TGG | + | chr5_4:59547950-59547969 | Msa0860670:intron | 35.0% | |
| CCCAACGAAAGATATATTTG+GGG | - | chr5_4:59547954-59547973 | None:intergenic | 35.0% | |
| CCCCAAATATATCTTTCGTT+GGG | + | chr5_4:59547951-59547970 | Msa0860670:intron | 35.0% | |
| GCCCAACGAAAGATATATTT+GGG | - | chr5_4:59547955-59547974 | None:intergenic | 35.0% | |
| CAAATATATCTTTCGTTGGG+CGG | + | chr5_4:59547954-59547973 | Msa0860670:intron | 35.0% | |
| ! | ACCCCATCTAAAACTGAAAT+CGG | + | chr5_4:59548225-59548244 | Msa0860670:intron | 35.0% |
| !!! | ACCCGATTTCAGTTTTAGAT+GGG | - | chr5_4:59548230-59548249 | None:intergenic | 35.0% |
| ! | TTTTTCCGTTATGGATTTCC+TGG | + | chr5_4:59548392-59548411 | Msa0860670:intron | 35.0% |
| ATGTTCCAGGAAATCCATAA+CGG | - | chr5_4:59548400-59548419 | None:intergenic | 35.0% | |
| AAAATACGACGATATGTTCC+AGG | - | chr5_4:59548413-59548432 | None:intergenic | 35.0% | |
| ! | GGGATTTTCAATTCTGATTG+TGG | + | chr5_4:59548578-59548597 | Msa0860670:intron | 35.0% |
| TTATCGAGTAGATAGTCATC+TGG | + | chr5_4:59548641-59548660 | Msa0860670:intron | 35.0% | |
| TATCGAGTAGATAGTCATCT+GGG | + | chr5_4:59548642-59548661 | Msa0860670:intron | 35.0% | |
| TACGTATTCAAGCTTCATAG+TGG | - | chr5_4:59548811-59548830 | None:intergenic | 35.0% | |
| CCCCAAATATATCTTTCGTT+TGG | + | chr5_4:59547951-59547970 | Msa0860670:intron | 35.0% | |
| CGCCAAACGAAAGATATATT+TGG | - | chr5_4:59549208-59549227 | None:intergenic | 35.0% | |
| AGTTGGAATGGAAACAACTA+CGG | - | chr5_4:59549907-59549926 | None:intergenic | 35.0% | |
| ! | CTATATCAGGTTGTTACTGA+AGG | + | chr5_4:59549939-59549958 | Msa0860670:intron | 35.0% |
| TGAAGGAAGACAAACTAGTT+TGG | + | chr5_4:59549956-59549975 | Msa0860670:CDS | 35.0% | |
| AATAGAAAGAAATCTGGTCG+TGG | + | chr5_4:59550002-59550021 | Msa0860670:CDS | 35.0% | |
| AGTTCTGTAACGAACAATCA+AGG | - | chr5_4:59550214-59550233 | None:intergenic | 35.0% | |
| GATCCGTTTCGTAATGATAA+CGG | + | chr5_4:59550266-59550285 | Msa0860670:CDS | 35.0% | |
| ATTGAGATATGTTGGGGAAA+GGG | - | chr5_4:59550417-59550436 | None:intergenic | 35.0% | |
| GCAATGTCATTGAGATATGT+TGG | - | chr5_4:59550425-59550444 | None:intergenic | 35.0% | |
| TATCTGTCCACAGTTAGAAA+AGG | + | chr5_4:59550598-59550617 | Msa0860670:CDS | 35.0% | |
| TTCACATCTCTTGTTGCAAT+AGG | - | chr5_4:59550639-59550658 | None:intergenic | 35.0% | |
| AACAAGAGATGTGAATCAGA+AGG | + | chr5_4:59550644-59550663 | Msa0860670:intron | 35.0% | |
| ! | TTTCTTATAGAAGGTGCAAC+TGG | + | chr5_4:59550901-59550920 | Msa0860670:intron | 35.0% |
| ! | TTCTTATAGAAGGTGCAACT+GGG | + | chr5_4:59550902-59550921 | Msa0860670:intron | 35.0% |
| ! | ATTTTTGTCAGGTCGTACAA+CGG | - | chr5_4:59550960-59550979 | None:intergenic | 35.0% |
| GCAGTTTGAATAACACAGTT+TGG | - | chr5_4:59550996-59551015 | None:intergenic | 35.0% | |
| GCAGTTTGAATAACACAGTT+TGG | - | chr5_4:59550996-59551015 | None:intergenic | 35.0% | |
| GAAGGAATTGAAAGATCTTG+AGG | + | chr5_4:59551279-59551298 | Msa0860670:CDS | 35.0% | |
| TCTCTACAAAATTCAAGGAC+TGG | - | chr5_4:59551575-59551594 | None:intergenic | 35.0% | |
| ! | AGCAAGATTAAAAGTACGAC+AGG | + | chr5_4:59551648-59551667 | Msa0860670:CDS | 35.0% |
| ATGTTGGTGTAATCAGGTAT+AGG | + | chr5_4:59551689-59551708 | Msa0860670:intron | 35.0% | |
| GTACTGAAAAGGAAAACAAG+TGG | - | chr5_4:59552287-59552306 | None:intergenic | 35.0% | |
| ! | TACTATTAGGCATTAGCTTG+TGG | + | chr5_4:59552304-59552323 | Msa0860670:intron | 35.0% |
| GAAACAACTACTCGAAACAA+AGG | + | chr5_4:59552449-59552468 | Msa0860670:intron | 35.0% | |
| !! | TTTTCTTGAATAACTTGCGC+TGG | - | chr5_4:59552488-59552507 | None:intergenic | 35.0% |
| ACAGAAAAAAGGAAACTGAG+TGG | - | chr5_4:59552523-59552542 | None:intergenic | 35.0% | |
| !! | GACAAGTGTTGACAGAAAAA+AGG | - | chr5_4:59552534-59552553 | None:intergenic | 35.0% |
| CAAACTACAAATGAAGGGAA+AGG | - | chr5_4:59552619-59552638 | None:intergenic | 35.0% | |
| GGTTTATTATGATCCAACCA+AGG | - | chr5_4:59552670-59552689 | None:intergenic | 35.0% | |
| CATGAATATGCTCCTTAAGA+TGG | + | chr5_4:59552767-59552786 | Msa0860670:intron | 35.0% | |
| !! | TGTATCGATTAGCCATCTTA+AGG | - | chr5_4:59552782-59552801 | None:intergenic | 35.0% |
| TTATCTTCAGGCATGGAAAA+GGG | - | chr5_4:59552900-59552919 | None:intergenic | 35.0% | |
| ! | TTTTCCATGCCTGAAGATAA+GGG | + | chr5_4:59552900-59552919 | Msa0860670:intron | 35.0% |
| ! | CAGTCAGTAGAAGTATAAAG+AGG | - | chr5_4:59553045-59553064 | None:intergenic | 35.0% |
| !! | CTACTGACTGAACAATTTTC+AGG | + | chr5_4:59553055-59553074 | Msa0860670:intron | 35.0% |
| !! | AAGAAATTGTTTTGCGAGAG+AGG | + | chr5_4:59553081-59553100 | Msa0860670:CDS | 35.0% |
| !! | AGAAATTGTTTTGCGAGAGA+GGG | + | chr5_4:59553082-59553101 | Msa0860670:CDS | 35.0% |
| CTTTCCAAGAAGGTTTAGAA+GGG | - | chr5_4:59553213-59553232 | None:intergenic | 35.0% | |
| CTTCTAAACCTTCTTGGAAA+GGG | + | chr5_4:59553212-59553231 | Msa0860670:CDS | 35.0% | |
| ! | AGAGTTCCTTTGCCTTTTAT+TGG | + | chr5_4:59553353-59553372 | Msa0860670:intron | 35.0% |
| CATTTGCCAATAAAAGGCAA+AGG | - | chr5_4:59553362-59553381 | None:intergenic | 35.0% | |
| GTTACATAAGGCATGCAATT+CGG | + | chr5_4:59553512-59553531 | Msa0860670:CDS | 35.0% | |
| TTACATAAGGCATGCAATTC+GGG | + | chr5_4:59553513-59553532 | Msa0860670:CDS | 35.0% | |
| AGAACAGTGCAGAATGTATT+TGG | - | chr5_4:59553607-59553626 | None:intergenic | 35.0% | |
| ! | AAGTTATTCTGGAGAGCTTA+TGG | - | chr5_4:59553810-59553829 | None:intergenic | 35.0% |
| !! | ATTGCCAAAGTGACTGATTT+TGG | + | chr5_4:59554203-59554222 | Msa0860670:intron | 35.0% |
| AAGACCAAAATCAGTCACTT+TGG | - | chr5_4:59554210-59554229 | None:intergenic | 35.0% | |
| GTGATGAAGATCATTGTTGT+AGG | + | chr5_4:59554305-59554324 | Msa0860670:intron | 35.0% | |
| ! | TTGAAGTGTTCCAAACTTGT+TGG | + | chr5_4:59554338-59554357 | Msa0860670:intron | 35.0% |
| ATGACCTTGGATGATATAAG+AGG | - | chr5_4:59554469-59554488 | None:intergenic | 35.0% | |
| !! | TTGTCAGTCATTTTGGTCAA+TGG | + | chr5_4:59554547-59554566 | Msa0860670:intron | 35.0% |
| ! | ATTTCTGACTTGTGGAAAAC+AGG | + | chr5_4:59554658-59554677 | Msa0860670:intron | 35.0% |
| ! | GAAGTATTCTCTCTTGTGTT+TGG | - | chr5_4:59554751-59554770 | None:intergenic | 35.0% |
| CACAATTATTAAGGCACACA+AGG | + | chr5_4:59554778-59554797 | Msa0860670:CDS | 35.0% | |
| TTAGAAACAGTAGGTCTTGA+GGG | - | chr5_4:59554812-59554831 | None:intergenic | 35.0% | |
| ATTAGAAACAGTAGGTCTTG+AGG | - | chr5_4:59554813-59554832 | None:intergenic | 35.0% | |
| !! | AAGACCTACTGTTTCTAATG+AGG | + | chr5_4:59554814-59554833 | Msa0860670:CDS | 35.0% |
| TTTGCCTCATTAGAAACAGT+AGG | - | chr5_4:59554821-59554840 | None:intergenic | 35.0% | |
| !! | TACTGTTTCTAATGAGGCAA+AGG | + | chr5_4:59554820-59554839 | Msa0860670:CDS | 35.0% |
| CGGGCAGTATTTATCATAAA+AGG | - | chr5_4:59554856-59554875 | None:intergenic | 35.0% | |
| CACATTCAGATGAATTGTCA+AGG | - | chr5_4:59555010-59555029 | None:intergenic | 35.0% | |
| TTTAATGGCATTGTGACCAA+GGG | - | chr5_4:59555042-59555061 | None:intergenic | 35.0% | |
| ! | TTTTAATGGCATTGTGACCA+AGG | - | chr5_4:59555043-59555062 | None:intergenic | 35.0% |
| TAAAACTCCTCACAGTTTAG+AGG | + | chr5_4:59555336-59555355 | Msa0860670:intron | 35.0% | |
| TATTTGTAGGCAGTAAGTAC+AGG | - | chr5_4:59555378-59555397 | None:intergenic | 35.0% | |
| ACTGCATGTACAAATTTGTC+AGG | + | chr5_4:59555423-59555442 | Msa0860670:intron | 35.0% | |
| TTTGTCAGGAATTTATACGG+CGG | + | chr5_4:59555437-59555456 | Msa0860670:intron | 35.0% | |
| TTCTTCACGTATGTGAGATA+TGG | - | chr5_4:59555517-59555536 | None:intergenic | 35.0% | |
| TTTCTTATCTCAAATGGGTG+AGG | + | chr5_4:59555656-59555675 | Msa0860670:three_prime_UTR | 35.0% | |
| TTCTTATCTCAAATGGGTGA+GGG | + | chr5_4:59555657-59555676 | Msa0860670:three_prime_UTR | 35.0% | |
| ! | TGAGTTGAATTGACCTTGAA+AGG | + | chr5_4:59555768-59555787 | Msa0860670:three_prime_UTR | 35.0% |
| GAGTTGAATTGACCTTGAAA+GGG | + | chr5_4:59555769-59555788 | Msa0860670:three_prime_UTR | 35.0% | |
| TTTACATCATGACCCTTTCA+AGG | - | chr5_4:59555784-59555803 | None:intergenic | 35.0% | |
| TTGAAAGGGTCATGATGTAA+AGG | + | chr5_4:59555783-59555802 | Msa0860670:three_prime_UTR | 35.0% | |
| TCTTCATGCGACCAAATTAT+TGG | + | chr5_4:59555837-59555856 | Msa0860670:three_prime_UTR | 35.0% | |
| !! | AGTCTAGGGTTTGTTAAGAG+CGG | - | chr5_4:59546683-59546702 | None:intergenic | 40.0% |
| GACCCGCGTAAAGAAAATTA+GGG | - | chr5_4:59546893-59546912 | None:intergenic | 40.0% | |
| AGTTACAGAGGCAACAATGT+CGG | + | chr5_4:59547093-59547112 | Msa0860670:intron | 40.0% | |
| GTCGAATTCTTCGAACCAAT+CGG | + | chr5_4:59547138-59547157 | Msa0860670:CDS | 40.0% | |
| TCCAGCTTAGCAATCTTTGT+AGG | - | chr5_4:59547175-59547194 | None:intergenic | 40.0% | |
| TCAGAATCACTTGAACTGCA+AGG | - | chr5_4:59547307-59547326 | None:intergenic | 40.0% | |
| !! | TTCAATGCTGATTTAGGAGC+AGG | + | chr5_4:59547431-59547450 | Msa0860670:intron | 40.0% |
| ACATTCAAAGACGGTAGTGA+CGG | - | chr5_4:59547524-59547543 | None:intergenic | 40.0% | |
| ATTCGAGCTTCACACATTCA+AGG | - | chr5_4:59547628-59547647 | None:intergenic | 40.0% | |
| CGCCCAACGAAAGATATATT+TGG | - | chr5_4:59547956-59547975 | None:intergenic | 40.0% | |
| !! | TCATAGTGGACAACATCTCA+AGG | - | chr5_4:59548018-59548037 | None:intergenic | 40.0% |
| TACGTATTCGAGCTTCATAG+TGG | - | chr5_4:59548032-59548051 | None:intergenic | 40.0% | |
| TGAAGCTCGAATACGTAATG+CGG | + | chr5_4:59548035-59548054 | Msa0860670:intron | 40.0% | |
| !!! | CCCGATTTCAGTTTTAGATG+GGG | - | chr5_4:59548229-59548248 | None:intergenic | 40.0% |
| ! | CCCCATCTAAAACTGAAATC+GGG | + | chr5_4:59548226-59548245 | Msa0860670:intron | 40.0% |
| !!! | GACCCGATTTCAGTTTTAGA+TGG | - | chr5_4:59548231-59548250 | None:intergenic | 40.0% |
| !!! | GGTCTGAGGGTTATTTTTGT+TGG | + | chr5_4:59548527-59548546 | Msa0860670:intron | 40.0% |
| !! | CATAGTGGATAGCACATTCA+AGG | - | chr5_4:59548796-59548815 | None:intergenic | 40.0% |
| TGAAGCTTGAATACGTAGTG+CGG | + | chr5_4:59548814-59548833 | Msa0860670:intron | 40.0% | |
| ! | ATCCCTTTTTATCTGCGAGA+TGG | + | chr5_4:59548945-59548964 | Msa0860670:intron | 40.0% |
| ! | TCCCTTTTTATCTGCGAGAT+GGG | + | chr5_4:59548946-59548965 | Msa0860670:intron | 40.0% |
| ACCCATCTCGCAGATAAAAA+GGG | - | chr5_4:59548950-59548969 | None:intergenic | 40.0% | |
| AACCCATCTCGCAGATAAAA+AGG | - | chr5_4:59548951-59548970 | None:intergenic | 40.0% | |
| !! | TTTTATCTGCGAGATGGGTT+TGG | + | chr5_4:59548951-59548970 | Msa0860670:intron | 40.0% |
| TAAAACGCCCAACACATTCA+TGG | - | chr5_4:59549144-59549163 | None:intergenic | 40.0% | |
| GTGTCTCAACTCTCGATTAA+TGG | - | chr5_4:59549285-59549304 | None:intergenic | 40.0% | |
| CGAGAGTTGAGACACATTTA+TGG | + | chr5_4:59549290-59549309 | Msa0860670:intron | 40.0% | |
| AGTCAAGGACTTTAGCGATA+TGG | + | chr5_4:59549335-59549354 | Msa0860670:intron | 40.0% | |
| ! | GGTCGAATGTGTTCTTTTGA+TGG | + | chr5_4:59549540-59549559 | Msa0860670:intron | 40.0% |
| CTTTCTATTCCAGAATGGTG+CGG | + | chr5_4:59549597-59549616 | Msa0860670:intron | 40.0% | |
| ACATCATCGTTATCATCGTG+AGG | - | chr5_4:59549661-59549680 | None:intergenic | 40.0% | |
| !! | TGATGTTTTTGAACGTGCTG+AGG | + | chr5_4:59549675-59549694 | Msa0860670:CDS | 40.0% |
| GCCGTGTCTCATTGAAAATA+CGG | + | chr5_4:59549756-59549775 | Msa0860670:intron | 40.0% | |
| ! | GCCGTATTTTCAATGAGACA+CGG | - | chr5_4:59549760-59549779 | None:intergenic | 40.0% |
| CAATGCGTCAGATAAATTGC+TGG | + | chr5_4:59549779-59549798 | Msa0860670:intron | 40.0% | |
| TCAGATAAATTGCTGGTGCT+TGG | + | chr5_4:59549786-59549805 | Msa0860670:intron | 40.0% | |
| AGTGGTACTCTGTCTCAATT+TGG | + | chr5_4:59549879-59549898 | Msa0860670:intron | 40.0% | |
| TCTGGTCTGATCATTAGACT+TGG | - | chr5_4:59550063-59550082 | None:intergenic | 40.0% | |
| TCAACAGTTTCGGCTTCAAA+TGG | + | chr5_4:59550095-59550114 | Msa0860670:CDS | 40.0% | |
| ! | AGTTCCACGTGCAAGTTTTA+AGG | + | chr5_4:59550325-59550344 | Msa0860670:intron | 40.0% |
| CATTGAGATATGTTGGGGAA+AGG | - | chr5_4:59550418-59550437 | None:intergenic | 40.0% | |
| ACGTGCAAAAGTTGTTCTGT+TGG | + | chr5_4:59550529-59550548 | Msa0860670:CDS | 40.0% | |
| TGCAAAAGTTGTTCTGTTGG+AGG | + | chr5_4:59550532-59550551 | Msa0860670:CDS | 40.0% | |
| ACAGATATTCTGATGCTGAG+AGG | - | chr5_4:59550585-59550604 | None:intergenic | 40.0% | |
| GTTGTACGACCTGACAAAAA+TGG | + | chr5_4:59550959-59550978 | Msa0860670:intron | 40.0% | |
| !!! | GTTTCACTGCCATTTTTGTC+AGG | - | chr5_4:59550971-59550990 | None:intergenic | 40.0% |
| TGAGGAGCAAATGAAACCTA+AGG | + | chr5_4:59551297-59551316 | Msa0860670:CDS | 40.0% | |
| ! | TTTTGTGTCTCGAGAGAATC+GGG | - | chr5_4:59551364-59551383 | None:intergenic | 40.0% |
| ! | GTTTTGTGTCTCGAGAGAAT+CGG | - | chr5_4:59551365-59551384 | None:intergenic | 40.0% |
| TCGAGACACAAAACTCCTAT+TGG | + | chr5_4:59551371-59551390 | Msa0860670:intron | 40.0% | |
| CGAGACACAAAACTCCTATT+GGG | + | chr5_4:59551372-59551391 | Msa0860670:intron | 40.0% | |
| AGGACTGGATGTTAATATGC+CGG | - | chr5_4:59551560-59551579 | None:intergenic | 40.0% | |
| TCATTGAGACTCGGAAATGT+TGG | + | chr5_4:59551673-59551692 | Msa0860670:CDS | 40.0% | |
| TCGGAAATGTTGGTGTAATC+AGG | + | chr5_4:59551683-59551702 | Msa0860670:CDS | 40.0% | |
| ! | AACTGTCTTATCTGAGACCT+GGG | + | chr5_4:59551793-59551812 | Msa0860670:CDS | 40.0% |
| AAAGAGGAGACATACAAGCT+GGG | - | chr5_4:59551849-59551868 | None:intergenic | 40.0% | |
| AGTAGATGTCTTACCCTCTT+TGG | + | chr5_4:59551929-59551948 | Msa0860670:intron | 40.0% | |
| GTAGATGTCTTACCCTCTTT+GGG | + | chr5_4:59551930-59551949 | Msa0860670:intron | 40.0% | |
| TTGAATCCTTGTCCCAAAGA+GGG | - | chr5_4:59551945-59551964 | None:intergenic | 40.0% | |
| !! | AAGGGCCTTTTTGCTTTTGT+TGG | + | chr5_4:59552218-59552237 | Msa0860670:intron | 40.0% |
| ACAACTACTCGAAACAAAGG+AGG | + | chr5_4:59552452-59552471 | Msa0860670:CDS | 40.0% | |
| AACACTTGTCTTCCTGAACT+TGG | + | chr5_4:59552544-59552563 | Msa0860670:intron | 40.0% | |
| ACACTTGTCTTCCTGAACTT+GGG | + | chr5_4:59552545-59552564 | Msa0860670:intron | 40.0% | |
| AAATGAAGGGAAAGGGAAAG+CGG | - | chr5_4:59552611-59552630 | None:intergenic | 40.0% | |
| CTTATCTTCAGGCATGGAAA+AGG | - | chr5_4:59552901-59552920 | None:intergenic | 40.0% | |
| ! | CTTTTCCATGCCTGAAGATA+AGG | + | chr5_4:59552899-59552918 | Msa0860670:intron | 40.0% |
| ATTCCATCACCCTTATCTTC+AGG | - | chr5_4:59552912-59552931 | None:intergenic | 40.0% | |
| GGAAGATATTCTCATTCACG+AGG | + | chr5_4:59552953-59552972 | Msa0860670:CDS | 40.0% | |
| AAACGCATTCGAGATGAAGA+TGG | + | chr5_4:59553146-59553165 | Msa0860670:CDS | 40.0% | |
| TTCGAGATGAAGATGGTTCA+CGG | + | chr5_4:59553153-59553172 | Msa0860670:CDS | 40.0% | |
| CCTTTCCAAGAAGGTTTAGA+AGG | - | chr5_4:59553214-59553233 | None:intergenic | 40.0% | |
| CCTTCTAAACCTTCTTGGAA+AGG | + | chr5_4:59553211-59553230 | Msa0860670:CDS | 40.0% | |
| !! | AAAGGAACTCTCTAGGATTC+TGG | - | chr5_4:59553344-59553363 | None:intergenic | 40.0% |
| AAAAGGCAAAGGAACTCTCT+AGG | - | chr5_4:59553351-59553370 | None:intergenic | 40.0% | |
| !! | TTTCCAGCAGGCTTTTGATT+TGG | + | chr5_4:59553420-59553439 | Msa0860670:intron | 40.0% |
| TATGTTGCATGCAAGCTTCA+TGG | + | chr5_4:59553454-59553473 | Msa0860670:CDS | 40.0% | |
| AACAATATGACGATGGACCA+AGG | - | chr5_4:59553557-59553576 | None:intergenic | 40.0% | |
| !! | ACTGTTCTAGAGTATTGCAG+CGG | + | chr5_4:59553619-59553638 | Msa0860670:intron | 40.0% |
| TGATAGACTATGGGTCTGTT+TGG | + | chr5_4:59553691-59553710 | Msa0860670:intron | 40.0% | |
| AACAGAGGAGGATCAAATGA+AGG | - | chr5_4:59554009-59554028 | None:intergenic | 40.0% | |
| AACACCTATATTGCCTGAGA+AGG | + | chr5_4:59554064-59554083 | Msa0860670:intron | 40.0% | |
| !!! | TTTTGGTCTTAGCAAGATCG+TGG | + | chr5_4:59554220-59554239 | Msa0860670:intron | 40.0% |
| AAGATCGTGGAGAATGATGT+GGG | + | chr5_4:59554233-59554252 | Msa0860670:intron | 40.0% | |
| TTGTGCAAACATCCAAGTGT+TGG | + | chr5_4:59554606-59554625 | Msa0860670:intron | 40.0% | |
| ! | CACATGACATTTCTGACTTG+TGG | + | chr5_4:59554650-59554669 | Msa0860670:intron | 40.0% |
| GTTTCTAATGAGGCAAAGGT+AGG | + | chr5_4:59554824-59554843 | Msa0860670:intron | 40.0% | |
| TTAATGGCATTGTGACCAAG+GGG | - | chr5_4:59555041-59555060 | None:intergenic | 40.0% | |
| ! | TTTGGTTCCTCTAAACTGTG+AGG | - | chr5_4:59555346-59555365 | None:intergenic | 40.0% |
| ! | GGCAGTAAGTACAGGTATTT+TGG | - | chr5_4:59555370-59555389 | None:intergenic | 40.0% |
| TGAGCAATGGTCAATACATC+TGG | - | chr5_4:59555490-59555509 | None:intergenic | 40.0% | |
| GAGATATGGATCTTGAGCAA+TGG | - | chr5_4:59555503-59555522 | None:intergenic | 40.0% | |
| AGCAGTGATGTTCATTGACA+TGG | + | chr5_4:59555536-59555555 | Msa0860670:exon | 40.0% | |
| ! | TCCCCACCAAAAAAGCATAT+GGG | + | chr5_4:59555572-59555591 | Msa0860670:three_prime_UTR | 40.0% |
| !!! | TCCCCATATGCTTTTTTGGT+GGG | - | chr5_4:59555577-59555596 | None:intergenic | 40.0% |
| !!! | ATCCCCATATGCTTTTTTGG+TGG | - | chr5_4:59555578-59555597 | None:intergenic | 40.0% |
| !!! | GAGATCCCCATATGCTTTTT+TGG | - | chr5_4:59555581-59555600 | None:intergenic | 40.0% |
| !!! | CAACTAGCTTTTTGCTACTC+CGG | - | chr5_4:59555750-59555769 | None:intergenic | 40.0% |
| AAGGGTCATGATGTAAAGGT+AGG | + | chr5_4:59555787-59555806 | Msa0860670:three_prime_UTR | 40.0% | |
| GTGGAATCAAAAGCTTGGGA+GGG | - | chr5_4:59546661-59546680 | None:intergenic | 45.0% | |
| AGCGGTGGAATCAAAAGCTT+GGG | - | chr5_4:59546665-59546684 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGTCTA+GGG | - | chr5_4:59546697-59546716 | None:intergenic | 45.0% | |
| ! | TGGGTGTGTTGATGTTGTGA+AGG | - | chr5_4:59546799-59546818 | None:intergenic | 45.0% |
| CGACCCGCGTAAAGAAAATT+AGG | - | chr5_4:59546894-59546913 | None:intergenic | 45.0% | |
| GCCTACAAAGATTGCTAAGC+TGG | + | chr5_4:59547171-59547190 | Msa0860670:CDS | 45.0% | |
| TCAACTGCTTCTCAGCAACA+AGG | + | chr5_4:59547220-59547239 | Msa0860670:CDS | 45.0% | |
| TTCCCAGCAGAAGAAACAGA+AGG | - | chr5_4:59547250-59547269 | None:intergenic | 45.0% | |
| TCTTCTGCTGGGAAATTCAG+TGG | + | chr5_4:59547256-59547275 | Msa0860670:CDS | 45.0% | |
| TGGAGTAGCAGCTGAAGAAA+TGG | + | chr5_4:59547276-59547295 | Msa0860670:CDS | 45.0% | |
| TGAAGCTCGAATATGCGAGT+GGG | + | chr5_4:59547636-59547655 | Msa0860670:intron | 45.0% | |
| GAAGCTCGAATACGTAATGC+GGG | + | chr5_4:59548036-59548055 | Msa0860670:intron | 45.0% | |
| AGGGTGAGCTTGTAGTATGA+GGG | - | chr5_4:59548464-59548483 | None:intergenic | 45.0% | |
| TAGGGTGAGCTTGTAGTATG+AGG | - | chr5_4:59548465-59548484 | None:intergenic | 45.0% | |
| ! | TGCAAGGTTTGATGGTCTGA+GGG | + | chr5_4:59548514-59548533 | Msa0860670:intron | 45.0% |
| !! | AGTCATCTGGGTTCTGAATG+TGG | + | chr5_4:59548654-59548673 | Msa0860670:intron | 45.0% |
| GAAGCTTGAATACGTAGTGC+GGG | + | chr5_4:59548815-59548834 | Msa0860670:intron | 45.0% | |
| AACACATTCATGGACCCAGA+TGG | - | chr5_4:59549134-59549153 | None:intergenic | 45.0% | |
| ATCTGGGTCCATGAATGTGT+TGG | + | chr5_4:59549133-59549152 | Msa0860670:intron | 45.0% | |
| TCTGGGTCCATGAATGTGTT+GGG | + | chr5_4:59549134-59549153 | Msa0860670:intron | 45.0% | |
| GATATGGTCACGCTCATTTG+TGG | + | chr5_4:59549351-59549370 | Msa0860670:intron | 45.0% | |
| TCAAGAAATCCGCACCATTC+TGG | - | chr5_4:59549609-59549628 | None:intergenic | 45.0% | |
| ! | TTTTAAGCGCTTGCGTGTGT+TGG | - | chr5_4:59549638-59549657 | None:intergenic | 45.0% |
| AAGAAATCTGGTCGTGGAAG+AGG | + | chr5_4:59550008-59550027 | Msa0860670:CDS | 45.0% | |
| AGAAATCTGGTCGTGGAAGA+GGG | + | chr5_4:59550009-59550028 | Msa0860670:CDS | 45.0% | |
| GCGCCGTTATCATTACGAAA+CGG | - | chr5_4:59550272-59550291 | None:intergenic | 45.0% | |
| !! | TGATAACGGCGCTTCATTAG+AGG | + | chr5_4:59550280-59550299 | Msa0860670:CDS | 45.0% |
| CTTGCCTTAAAACTTGCACG+TGG | - | chr5_4:59550332-59550351 | None:intergenic | 45.0% | |
| AAGGCAAGTAGAAGAAAGGG+TGG | + | chr5_4:59550344-59550363 | Msa0860670:intron | 45.0% | |
| ! | GAACTGTCTTATCTGAGACC+TGG | + | chr5_4:59551792-59551811 | Msa0860670:CDS | 45.0% |
| ! | TTATCTGAGACCTGGGAAGA+TGG | + | chr5_4:59551800-59551819 | Msa0860670:CDS | 45.0% |
| GAAAGAGGAGACATACAAGC+TGG | - | chr5_4:59551850-59551869 | None:intergenic | 45.0% | |
| CTTGAATCCTTGTCCCAAAG+AGG | - | chr5_4:59551946-59551965 | None:intergenic | 45.0% | |
| GTCTTATGGGTCTCTCGATT+AGG | + | chr5_4:59552169-59552188 | Msa0860670:intron | 45.0% | |
| CACTTGTCTTCCTGAACTTG+GGG | + | chr5_4:59552546-59552565 | Msa0860670:intron | 45.0% | |
| ATCACCCTTATCTTCAGGCA+TGG | - | chr5_4:59552907-59552926 | None:intergenic | 45.0% | |
| ATGCCTGAAGATAAGGGTGA+TGG | + | chr5_4:59552906-59552925 | Msa0860670:intron | 45.0% | |
| ! | CTCGACTAGCCAGCATTAAA+CGG | + | chr5_4:59552988-59553007 | Msa0860670:CDS | 45.0% |
| ! | TCGACTAGCCAGCATTAAAC+GGG | + | chr5_4:59552989-59553008 | Msa0860670:CDS | 45.0% |
| GCAACTTACCCGTTTAATGC+TGG | - | chr5_4:59553000-59553019 | None:intergenic | 45.0% | |
| ! | TTCCCTTCTCTAGTTCGTAG+CGG | - | chr5_4:59553109-59553128 | None:intergenic | 45.0% |
| TACGCCCTTCTAAACCTTCT+TGG | + | chr5_4:59553206-59553225 | Msa0860670:CDS | 45.0% | |
| CTAAACCTTCTTGGAAAGGG+AGG | + | chr5_4:59553215-59553234 | Msa0860670:CDS | 45.0% | |
| TGAATCCTCCCTTTCCAAGA+AGG | - | chr5_4:59553223-59553242 | None:intergenic | 45.0% | |
| ATCTTTCCCTGGTAGAACAG+AGG | - | chr5_4:59554024-59554043 | None:intergenic | 45.0% | |
| ACAGCATCAAGATCTTTCCC+TGG | - | chr5_4:59554035-59554054 | None:intergenic | 45.0% | |
| ACCTATATTGCCTGAGAAGG+AGG | + | chr5_4:59554067-59554086 | Msa0860670:intron | 45.0% | |
| CAAGATCGTGGAGAATGATG+TGG | + | chr5_4:59554232-59554251 | Msa0860670:intron | 45.0% | |
| GGATGTAAGTTCCATACCCT+GGG | - | chr5_4:59554261-59554280 | None:intergenic | 45.0% | |
| GGTATGGAACTTACATCCCA+GGG | + | chr5_4:59554263-59554282 | Msa0860670:intron | 45.0% | |
| GTATGGAACTTACATCCCAG+GGG | + | chr5_4:59554264-59554283 | Msa0860670:intron | 45.0% | |
| TATGGAACTTACATCCCAGG+GGG | + | chr5_4:59554265-59554284 | Msa0860670:intron | 45.0% | |
| ! | TTGCTGAGCTCAAAGCATTC+AGG | - | chr5_4:59554442-59554461 | None:intergenic | 45.0% |
| GACGCCTCTTATATCATCCA+AGG | + | chr5_4:59554462-59554481 | Msa0860670:CDS | 45.0% | |
| !! | GTGGAAAACAGGTTGATGTC+TGG | + | chr5_4:59554669-59554688 | Msa0860670:intron | 45.0% |
| TGTGTTTGGTCATGTCCGAA+AGG | - | chr5_4:59554737-59554756 | None:intergenic | 45.0% | |
| GCCAAAGAACAGTTAGCTAC+GGG | - | chr5_4:59554875-59554894 | None:intergenic | 45.0% | |
| GGCCAAAGAACAGTTAGCTA+CGG | - | chr5_4:59554876-59554895 | None:intergenic | 45.0% | |
| GAATGTGCAAATTCTCCCCT+TGG | + | chr5_4:59555023-59555042 | Msa0860670:intron | 45.0% | |
| !!! | ATGCTTTTTTGGTGGGGAGA+GGG | - | chr5_4:59555570-59555589 | None:intergenic | 45.0% |
| !!! | TATGCTTTTTTGGTGGGGAG+AGG | - | chr5_4:59555571-59555590 | None:intergenic | 45.0% |
| ! | CTCCCCACCAAAAAAGCATA+TGG | + | chr5_4:59555571-59555590 | Msa0860670:three_prime_UTR | 45.0% |
| !!! | CCCCATATGCTTTTTTGGTG+GGG | - | chr5_4:59555576-59555595 | None:intergenic | 45.0% |
| ! | CCCCACCAAAAAAGCATATG+GGG | + | chr5_4:59555573-59555592 | Msa0860670:three_prime_UTR | 45.0% |
| ATCTCAAATGGGTGAGGGAA+AGG | + | chr5_4:59555662-59555681 | Msa0860670:three_prime_UTR | 45.0% | |
| GGTGGAATCAAAAGCTTGGG+AGG | - | chr5_4:59546662-59546681 | None:intergenic | 50.0% | |
| GAGCGGTGGAATCAAAAGCT+TGG | - | chr5_4:59546666-59546685 | None:intergenic | 50.0% | |
| !! | CTAGGGTTTGTTAAGAGCGG+TGG | - | chr5_4:59546680-59546699 | None:intergenic | 50.0% |
| GAGAGAGAGAGAGAGAGTCT+AGG | - | chr5_4:59546698-59546717 | None:intergenic | 50.0% | |
| TAGGCAGAGACTGATCCGAT+TGG | - | chr5_4:59547156-59547175 | None:intergenic | 50.0% | |
| TGCTAAGCTGGAAGCTCGAA+TGG | + | chr5_4:59547183-59547202 | Msa0860670:CDS | 50.0% | |
| TAAGCTGGAAGCTCGAATGG+TGG | + | chr5_4:59547186-59547205 | Msa0860670:CDS | 50.0% | |
| AAGCTGGAAGCTCGAATGGT+GGG | + | chr5_4:59547187-59547206 | Msa0860670:CDS | 50.0% | |
| ! | GAAGCTCGAATGGTGGGAAA+AGG | + | chr5_4:59547193-59547212 | Msa0860670:CDS | 50.0% |
| ! | TGGCCTTCTGTTTCTTCTGC+TGG | + | chr5_4:59547244-59547263 | Msa0860670:CDS | 50.0% |
| ! | GGCCTTCTGTTTCTTCTGCT+GGG | + | chr5_4:59547245-59547264 | Msa0860670:CDS | 50.0% |
| GTGAAGCTCGAATATGCGAG+TGG | + | chr5_4:59547635-59547654 | Msa0860670:intron | 50.0% | |
| GAAGCTCGAATATGCGAGTG+GGG | + | chr5_4:59547637-59547656 | Msa0860670:intron | 50.0% | |
| AAGCTCGAATATGCGAGTGG+GGG | + | chr5_4:59547638-59547657 | Msa0860670:intron | 50.0% | |
| CTCGAATACGTAATGCGGGT+GGG | + | chr5_4:59548040-59548059 | Msa0860670:intron | 50.0% | |
| TCGAATACGTAATGCGGGTG+GGG | + | chr5_4:59548041-59548060 | Msa0860670:intron | 50.0% | |
| ! | CTGCAAGGTTTGATGGTCTG+AGG | + | chr5_4:59548513-59548532 | Msa0860670:intron | 50.0% |
| CTTGAATACGTAGTGCGGGT+GGG | + | chr5_4:59548819-59548838 | Msa0860670:intron | 50.0% | |
| TTGAATACGTAGTGCGGGTG+GGG | + | chr5_4:59548820-59548839 | Msa0860670:intron | 50.0% | |
| ! | GTCGTACAACGGACTTGGTT+TGG | - | chr5_4:59550949-59550968 | None:intergenic | 50.0% |
| CGACAGGACTCATTGAGACT+CGG | + | chr5_4:59551664-59551683 | Msa0860670:CDS | 50.0% | |
| GGAAGATGGTCAGGCGTTAA+AGG | + | chr5_4:59551814-59551833 | Msa0860670:CDS | 50.0% | |
| !! | GTCTTACCCTCTTTGGGACA+AGG | + | chr5_4:59551936-59551955 | Msa0860670:intron | 50.0% |
| GGGTCTCTCGATTAGGATCT+TGG | + | chr5_4:59552176-59552195 | Msa0860670:intron | 50.0% | |
| TCTTCCTGAACTTGGGGAAG+AGG | + | chr5_4:59552552-59552571 | Msa0860670:intron | 50.0% | |
| CTTCCTGAACTTGGGGAAGA+GGG | + | chr5_4:59552553-59552572 | Msa0860670:intron | 50.0% | |
| TTCCTGAACTTGGGGAAGAG+GGG | + | chr5_4:59552554-59552573 | Msa0860670:intron | 50.0% | |
| AGGGAAAGGGAAAGCGGAAA+AGG | - | chr5_4:59552605-59552624 | None:intergenic | 50.0% | |
| !! | GGGTGATGGAATAGATGCAG+AGG | + | chr5_4:59552920-59552939 | Msa0860670:CDS | 50.0% |
| GATGGAATAGATGCAGAGGC+TGG | + | chr5_4:59552924-59552943 | Msa0860670:CDS | 50.0% | |
| GACCGCTACGAACTAGAGAA+GGG | + | chr5_4:59553104-59553123 | Msa0860670:CDS | 50.0% | |
| ! | GGTTTAGAAGGGCGTAACGA+TGG | - | chr5_4:59553202-59553221 | None:intergenic | 50.0% |
| AGGATTCAGCGAGGTGTACA+AGG | + | chr5_4:59553235-59553254 | Msa0860670:intron | 50.0% | |
| CCACCAAATCAAAAGCCTGC+TGG | - | chr5_4:59553426-59553445 | None:intergenic | 50.0% | |
| !!! | CCAGCAGGCTTTTGATTTGG+TGG | + | chr5_4:59553423-59553442 | Msa0860670:intron | 50.0% |
| TGATCCTCCTCTGTTCTACC+AGG | + | chr5_4:59554014-59554033 | Msa0860670:intron | 50.0% | |
| GATCCTCCTCTGTTCTACCA+GGG | + | chr5_4:59554015-59554034 | Msa0860670:intron | 50.0% | |
| TTTCCCTGGTAGAACAGAGG+AGG | - | chr5_4:59554021-59554040 | None:intergenic | 50.0% | |
| GCCTCCTTCTCAGGCAATAT+AGG | - | chr5_4:59554071-59554090 | None:intergenic | 50.0% | |
| ATCACTCTAGCCTCCTTCTC+AGG | - | chr5_4:59554080-59554099 | None:intergenic | 50.0% | |
| GAGAATGATGTGGGATCCCA+GGG | + | chr5_4:59554242-59554261 | Msa0860670:intron | 50.0% | |
| GGGATGTAAGTTCCATACCC+TGG | - | chr5_4:59554262-59554281 | None:intergenic | 50.0% | |
| GGGTATGGAACTTACATCCC+AGG | + | chr5_4:59554262-59554281 | Msa0860670:intron | 50.0% | |
| ! | CTGAGCTCAAAGCATTCAGG+AGG | - | chr5_4:59554439-59554458 | None:intergenic | 50.0% |
| CTCTTTGGCAGACGTCCTTT+CGG | + | chr5_4:59554719-59554738 | Msa0860670:CDS | 50.0% | |
| GCCCGTAGCTAACTGTTCTT+TGG | + | chr5_4:59554871-59554890 | Msa0860670:intron | 50.0% | |
| GCGGTGTCTGACATATAACC+AGG | + | chr5_4:59555456-59555475 | Msa0860670:CDS | 50.0% | |
| ATACATCTGGTCTCTCAGCC+TGG | - | chr5_4:59555477-59555496 | None:intergenic | 50.0% | |
| CTGCTTCTCAGCAACAAGGC+TGG | + | chr5_4:59547224-59547243 | Msa0860670:CDS | 55.0% | |
| ! | GCTGATTTAGGAGCAGGCTG+TGG | + | chr5_4:59547437-59547456 | Msa0860670:intron | 55.0% |
| GCTCGAATACGTAATGCGGG+TGG | + | chr5_4:59548039-59548058 | Msa0860670:intron | 55.0% | |
| GCTTGAATACGTAGTGCGGG+TGG | + | chr5_4:59548818-59548837 | Msa0860670:intron | 55.0% | |
| TGAATACGTAGTGCGGGTGG+GGG | + | chr5_4:59548821-59548840 | Msa0860670:intron | 55.0% | |
| !! | GGGAGTTCTGGTTCAAGCAG+AGG | + | chr5_4:59550029-59550048 | Msa0860670:CDS | 55.0% |
| ! | TCTGGTTCAAGCAGAGGTCG+TGG | + | chr5_4:59550035-59550054 | Msa0860670:CDS | 55.0% |
| ! | AGAAGGTGCAACTGGGCAGT+TGG | + | chr5_4:59550909-59550928 | Msa0860670:intron | 55.0% |
| ! | GTGCAACTGGGCAGTTGGTA+TGG | + | chr5_4:59550914-59550933 | Msa0860670:intron | 55.0% |
| ! | GTCAGGTCGTACAACGGACT+TGG | - | chr5_4:59550954-59550973 | None:intergenic | 55.0% |
| GTGTCTCGAGAGAATCGGGA+AGG | - | chr5_4:59551360-59551379 | None:intergenic | 55.0% | |
| TGAGACCTGGGAAGATGGTC+AGG | + | chr5_4:59551805-59551824 | Msa0860670:CDS | 55.0% | |
| TAACGCCTGACCATCTTCCC+AGG | - | chr5_4:59551813-59551832 | None:intergenic | 55.0% | |
| AACCCCTCTTCCCCAAGTTC+AGG | - | chr5_4:59552559-59552578 | None:intergenic | 55.0% | |
| CTTGGGGAAGAGGGGTTAAG+TGG | + | chr5_4:59552562-59552581 | Msa0860670:intron | 55.0% | |
| AGATGCAGAGGCTGGATTGC+TGG | + | chr5_4:59552932-59552951 | Msa0860670:CDS | 55.0% | |
| GGACCGCTACGAACTAGAGA+AGG | + | chr5_4:59553103-59553122 | Msa0860670:CDS | 55.0% | |
| TGGAAAGGGAGGATTCAGCG+AGG | + | chr5_4:59553226-59553245 | Msa0860670:CDS | 55.0% | |
| GGAGAATGATGTGGGATCCC+AGG | + | chr5_4:59554241-59554260 | Msa0860670:intron | 55.0% | |
| TGATGTGGGATCCCAGGGTA+TGG | + | chr5_4:59554247-59554266 | Msa0860670:intron | 55.0% | |
| !! | CAGGTTGATGTCTGGTCTGC+TGG | + | chr5_4:59554677-59554696 | Msa0860670:intron | 55.0% |
| GAATACGTAGTGCGGGTGGG+GGG | + | chr5_4:59548822-59548841 | Msa0860670:intron | 60.0% | |
| GGTCGTGGAAGAGGGAGTTC+TGG | + | chr5_4:59550017-59550036 | Msa0860670:CDS | 60.0% | |
| GAACTTACATCCCAGGGGGC+TGG | + | chr5_4:59554269-59554288 | Msa0860670:intron | 60.0% | |
| CCAATACGTTCCAGCCCCCT+GGG | - | chr5_4:59554282-59554301 | None:intergenic | 60.0% | |
| ACCAATACGTTCCAGCCCCC+TGG | - | chr5_4:59554283-59554302 | None:intergenic | 60.0% | |
| CCCAGGGGGCTGGAACGTAT+TGG | + | chr5_4:59554279-59554298 | Msa0860670:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 59546575 | 59555904 | 59546575 | ID=Msa0860670;Name=Msa0860670 |
| chr5_4 | mRNA | 59546575 | 59555904 | 59546575 | ID=Msa0860670-mRNA-1;Parent=Msa0860670;Name=Msa0860670-mRNA-1;_AED=0.14;_eAED=0.14;_QI=374|0.8|0.81|1|0.86|0.87|16|361|550 |
| chr5_4 | exon | 59546575 | 59546952 | 59546575 | ID=Msa0860670-mRNA-1:exon:18267;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59547095 | 59547333 | 59547095 | ID=Msa0860670-mRNA-1:exon:18268;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59549610 | 59549696 | 59549610 | ID=Msa0860670-mRNA-1:exon:18269;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59549948 | 59550130 | 59549948 | ID=Msa0860670-mRNA-1:exon:18270;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59550251 | 59550301 | 59550251 | ID=Msa0860670-mRNA-1:exon:18271;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59550512 | 59550619 | 59550512 | ID=Msa0860670-mRNA-1:exon:18272;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59551274 | 59551318 | 59551274 | ID=Msa0860670-mRNA-1:exon:18273;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59551592 | 59551704 | 59551592 | ID=Msa0860670-mRNA-1:exon:18274;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59551787 | 59551853 | 59551787 | ID=Msa0860670-mRNA-1:exon:18275;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59552450 | 59552516 | 59552450 | ID=Msa0860670-mRNA-1:exon:18276;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59552916 | 59553010 | 59552916 | ID=Msa0860670-mRNA-1:exon:18277;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59553077 | 59553247 | 59553077 | ID=Msa0860670-mRNA-1:exon:18278;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59553430 | 59553536 | 59553430 | ID=Msa0860670-mRNA-1:exon:18279;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59554429 | 59554483 | 59554429 | ID=Msa0860670-mRNA-1:exon:18280;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59554680 | 59554841 | 59554680 | ID=Msa0860670-mRNA-1:exon:18281;Parent=Msa0860670-mRNA-1 |
| chr5_4 | exon | 59555445 | 59555904 | 59555445 | ID=Msa0860670-mRNA-1:exon:18282;Parent=Msa0860670-mRNA-1 |
| chr5_4 | five_prime_UTR | 59546575 | 59546948 | 59546575 | ID=Msa0860670-mRNA-1:five_prime_utr;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59546949 | 59546952 | 59546949 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59547095 | 59547333 | 59547095 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59549610 | 59549696 | 59549610 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59549948 | 59550130 | 59549948 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59550251 | 59550301 | 59550251 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59550512 | 59550619 | 59550512 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59551274 | 59551318 | 59551274 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59551592 | 59551704 | 59551592 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59551787 | 59551853 | 59551787 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59552450 | 59552516 | 59552450 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59552916 | 59553010 | 59552916 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59553077 | 59553247 | 59553077 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59553430 | 59553536 | 59553430 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59554429 | 59554483 | 59554429 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59554680 | 59554841 | 59554680 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | CDS | 59555445 | 59555543 | 59555445 | ID=Msa0860670-mRNA-1:cds;Parent=Msa0860670-mRNA-1 |
| chr5_4 | three_prime_UTR | 59555544 | 59555904 | 59555544 | ID=Msa0860670-mRNA-1:three_prime_utr;Parent=Msa0860670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
