AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0723760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0723760 MtrunA17_Chr5g0414621 88.582 1086 106 5 1 1071 1 1083 0.0 1841
Msa0723760 MtrunA17_Chr3g0086081 27.941 272 173 6 794 1058 22 277 2.28e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 281 sgRNAs with CRISPR-Local

Find 599 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTATAATGGATCCAATTT+TGG 0.129732 5_1:-21731272 Msa0723760:CDS
GATTTCTGCTTCTTATTTAA+TGG 0.155599 5_1:+21732323 None:intergenic
AATGAAGGATGAGTTATTTA+AGG 0.159155 5_1:-21728018 Msa0723760:CDS
CAGTTAATTGGATCTAATTT+TGG 0.176068 5_1:-21732167 Msa0723760:CDS
TTCATCTTCCCCAACATTAT+TGG 0.180311 5_1:+21731373 None:intergenic
TACTTCTGGCTTCAGTCCTT+TGG 0.224997 5_1:+21727754 None:intergenic
GCCTATAGTATTACTGATTA+AGG 0.226903 5_1:-21726573 Msa0723760:three_prime_UTR
AATAATGTGGAACAGTTAAT+TGG 0.236253 5_1:-21732179 Msa0723760:CDS
GAAGCTCCTAGCTTAGTTAT+TGG 0.253108 5_1:-21726956 Msa0723760:CDS
TAATTGGCTATGAGTTATTT+CGG 0.257229 5_1:-21734891 Msa0723760:five_prime_UTR
AATGCATCAAAACCCTTTAC+TGG 0.265831 5_1:+21733027 None:intergenic
AATTTCACGGGTAACACTTT+GGG 0.279330 5_1:+21728103 None:intergenic
CAATGTAATGGAGGCAATTC+CGG 0.285985 5_1:-21729193 Msa0723760:CDS
AATGAGCACTGCGACATTAA+TGG 0.290239 5_1:-21732278 Msa0723760:CDS
AATATGGAAATTAGAGGTTT+TGG 0.290274 5_1:-21731704 Msa0723760:intron
ACTGTCCATGCTCCCATTAT+TGG 0.295195 5_1:+21729165 None:intergenic
AATTGGCTATGAGTTATTTC+GGG 0.303159 5_1:-21734890 Msa0723760:five_prime_UTR
AACTCATCCTTCATTTCAAT+TGG 0.310372 5_1:+21728026 None:intergenic
TCCAACTGAAGAATATATTA+AGG 0.315623 5_1:-21726873 Msa0723760:CDS
AATTAAGCCACTAATAAAAT+TGG 0.316189 5_1:+21734909 None:intergenic
ATAACAAAAGATAGCTGAAT+TGG 0.320022 5_1:+21726660 None:intergenic
ACTTCTGGCTTCAGTCCTTT+GGG 0.320568 5_1:+21727755 None:intergenic
AATTCCGGAGTTTCCAATAA+TGG 0.323049 5_1:-21729178 Msa0723760:CDS
CAGCCCATCCTTTCTATGAT+TGG 0.326546 5_1:-21726794 Msa0723760:CDS
ACCAAACCATTCCATACTTC+TGG 0.335939 5_1:+21727740 None:intergenic
CAAGGTGCTGCAGCCGACTA+TGG 0.341425 5_1:-21729708 Msa0723760:intron
AAATTTACTGCTGTTAGTTC+CGG 0.347516 5_1:-21729367 Msa0723760:CDS
AATAATGTGGAAAACTATAA+TGG 0.347743 5_1:-21731284 Msa0723760:CDS
CCCTTAACCAGTCCTTCCTT+TGG 0.350725 5_1:+21729415 None:intergenic
ATTGTGGGAAAGTCCAAAAT+TGG 0.353823 5_1:+21731259 None:intergenic
AAATGTATTGGAGACAGATT+TGG 0.363685 5_1:-21730364 Msa0723760:CDS
TGAGTTATTTAAGGAATTCA+TGG 0.369916 5_1:-21728009 Msa0723760:intron
AAGGACTGAAGCCAGAAGTA+TGG 0.379724 5_1:-21727751 Msa0723760:CDS
ATTCCGGAGTTTCCAATAAT+GGG 0.380551 5_1:-21729177 Msa0723760:CDS
TAAAGAGATGGAACTCATTC+GGG 0.389737 5_1:-21729275 Msa0723760:CDS
TCGATTTGGAGTTTCAAATC+TGG 0.390582 5_1:-21734763 Msa0723760:intron
CCGGTGTGCAACGCTGAATC+AGG 0.393320 5_1:+21727650 None:intergenic
TAATTTCACGGGTAACACTT+TGG 0.395501 5_1:+21728102 None:intergenic
TCAGTTTGCAGAACTCGATT+TGG 0.397959 5_1:-21734777 Msa0723760:five_prime_UTR
TTTATATGACACTATGAAGT+TGG 0.399309 5_1:-21727071 Msa0723760:CDS
TGTTGGGGAAGATGAAGAAT+TGG 0.400107 5_1:-21731366 Msa0723760:CDS
ATAAAGAGATGGAACTCATT+CGG 0.400925 5_1:-21729276 Msa0723760:CDS
GGAATGGTTTGGTTGACATC+TGG 0.401090 5_1:-21727730 Msa0723760:CDS
CAAAAGAAAGGACCAGTAAA+GGG 0.402658 5_1:-21733039 Msa0723760:CDS
GCTTGATGACCTCACATTGT+TGG 0.407865 5_1:+21732139 None:intergenic
TCTTCCCCATCATCATAGTC+AGG 0.408084 5_1:+21729298 None:intergenic
AACACTACACCAATAATGTT+GGG 0.410853 5_1:-21731382 Msa0723760:CDS
TTTACGCTCATGTTCATAAG+AGG 0.414588 5_1:-21727430 Msa0723760:CDS
ACATGGGATCCTCCACTTGA+TGG 0.416628 5_1:+21730322 None:intergenic
TCCTTAATATATTCTTCAGT+TGG 0.417896 5_1:+21726872 None:intergenic
GCCAAAGGAAGGACTGGTTA+AGG 0.429386 5_1:-21729416 Msa0723760:CDS
TAATCTTTCCACTTCGCAGC+TGG 0.429397 5_1:+21728050 None:intergenic
CGTTGCCTGGTGGATGAGTT+GGG 0.429947 5_1:+21729119 None:intergenic
TTCTCCTATCAGCTTCTACA+TGG 0.431725 5_1:+21730305 None:intergenic
CAAAGGAAAGGACTGGTTAA+GGG 0.436228 5_1:-21730553 Msa0723760:CDS
TCGTTGCCTGGTGGATGAGT+TGG 0.439991 5_1:+21729118 None:intergenic
GAAAGGATGGGCTGCAACAT+AGG 0.442819 5_1:+21726803 None:intergenic
CCTGGTGGATGAGTTGGGTG+TGG 0.444566 5_1:+21729124 None:intergenic
AGCAGAAGCTGCACATACTT+TGG 0.446107 5_1:-21730047 Msa0723760:CDS
AACAAACTTAGCCGATACTA+AGG 0.447964 5_1:-21727786 Msa0723760:CDS
ATGAGCGTAAACATCTCTAT+AGG 0.452111 5_1:+21727442 None:intergenic
CACGATTGGGAAGGCCTTGG+TGG 0.455002 5_1:+21730732 None:intergenic
ATCGAATGCAAAAGAAAGGC+AGG 0.459373 5_1:-21732361 Msa0723760:CDS
CACTCAAAAGCAGTGAAGTT+GGG 0.461499 5_1:+21729095 None:intergenic
GTGCAACGCTGAATCAGGTT+TGG 0.467327 5_1:+21727655 None:intergenic
CCAAAGGAAGGACTGGTTAA+GGG 0.467558 5_1:-21729415 Msa0723760:CDS
TCAAAGGAAAGGACTGGTTA+AGG 0.467656 5_1:-21730554 Msa0723760:CDS
AATAACGTGACAAAATGTAT+TGG 0.470258 5_1:-21730376 Msa0723760:CDS
GAAGTATGTGCTGGTGGTGG+AGG 0.473827 5_1:+21730699 None:intergenic
AAACAGTTGCTTGTTCTTAG+CGG 0.477969 5_1:+21726619 None:intergenic
CCACTCAAAAGCAGTGAAGT+TGG 0.479015 5_1:+21729094 None:intergenic
CAAAAGAAAGGCAGGGGCAA+AGG 0.480291 5_1:-21732353 Msa0723760:CDS
TCAAAAGAAAGGACCAGTAA+AGG 0.482030 5_1:-21733040 Msa0723760:CDS
CTGCAGCCGACTATGGTAGC+TGG 0.488943 5_1:-21729701 Msa0723760:CDS
GTATGTACTGGTTGTGGCGG+TGG 0.490941 5_1:+21732512 None:intergenic
GAACACTACACCAATAATGT+TGG 0.491912 5_1:-21731383 Msa0723760:CDS
CTGGTGGATGAGTTGGGTGT+GGG 0.491963 5_1:+21729125 None:intergenic
TTTGCCTGTCAGTTTCTACA+TGG 0.492527 5_1:+21732836 None:intergenic
GCCTTAATCAGTAATACTAT+AGG 0.492593 5_1:+21726572 None:intergenic
AGAAGTGTGGGCAGAGGTGT+CGG 0.493941 5_1:-21727005 Msa0723760:CDS
TCAAAAGAAAGGACGGGGTA+AGG 0.494982 5_1:-21731465 Msa0723760:CDS
ATTAAGCGTGGTCGCGGAAG+AGG 0.495250 5_1:-21730115 Msa0723760:CDS
GCACATACTTTGGTTTCCCC+AGG 0.496531 5_1:-21730037 Msa0723760:intron
GATCCCATGTAGAAGCTGAT+AGG 0.498543 5_1:-21730309 Msa0723760:CDS
AAAGTCCTTACCTAGGGAAG+TGG 0.500836 5_1:+21733293 None:intergenic
GAAGTGTGGGCAGAGGTGTC+GGG 0.501850 5_1:-21727004 Msa0723760:CDS
GAGAAAAGTTACATCTGTAG+AGG 0.502049 5_1:-21732090 Msa0723760:CDS
AGGAGGATCAATGCACGATT+GGG 0.503714 5_1:+21730719 None:intergenic
AGTGTGGAACAGAACATGTA+TGG 0.505883 5_1:-21727867 Msa0723760:CDS
GTTACCAATCATAGAAAGGA+TGG 0.506801 5_1:+21726790 None:intergenic
TATGAGTTATTTCGGGTACA+AGG 0.509272 5_1:-21734883 Msa0723760:five_prime_UTR
GTTATTTCGGGTACAAGGCT+AGG 0.509428 5_1:-21734878 Msa0723760:five_prime_UTR
TGTTGAGTTTACCTGTCGTA+AGG 0.511554 5_1:+21727805 None:intergenic
TTTCGACAGTGCTTGTCGCA+TGG 0.511689 5_1:+21726766 None:intergenic
CACACTTCTGAATCAAACTC+TGG 0.512112 5_1:+21727019 None:intergenic
CACGTTTAGATCTTCTGCCT+CGG 0.512923 5_1:+21733352 None:intergenic
AGAGGAATTAAGCGTGGTCG+CGG 0.513084 5_1:-21730121 Msa0723760:CDS
AATAATGTGAAACAATGTAA+TGG 0.513178 5_1:-21729205 Msa0723760:CDS
AGTGAAGTTGGGTCGTTGCC+TGG 0.513670 5_1:+21729106 None:intergenic
ATCGCTTTCGATTCTACGAT+CGG 0.514130 5_1:-21734828 Msa0723760:five_prime_UTR
AGATTATCCAATTGAAATGA+AGG 0.516525 5_1:-21728033 Msa0723760:CDS
TCTCCTATCAGCTTCTACAT+GGG 0.516655 5_1:+21730306 None:intergenic
ACCGAAGTATGTACTGGTTG+TGG 0.516804 5_1:+21732506 None:intergenic
AGACGGATTACTCGTGGTCA+AGG 0.517447 5_1:-21732581 Msa0723760:CDS
AGTAGACGTGGTCGAGGGAG+AGG 0.517509 5_1:-21731680 Msa0723760:CDS
TAGAATTCAAAAGAAAGGAC+GGG 0.517914 5_1:-21731471 Msa0723760:CDS
AGAAAAGTTATATCTGTTGA+GGG 0.517925 5_1:-21731194 Msa0723760:CDS
AAGAATAGAATTCAAAAGAA+AGG 0.520192 5_1:-21731476 Msa0723760:CDS
ATGCACGATTGGGAAGGCCT+TGG 0.522491 5_1:+21730729 None:intergenic
GGTGATACTTCTGCCACAAT+GGG 0.522743 5_1:-21729648 Msa0723760:intron
TATTTATAAACAACAACTAC+AGG 0.524190 5_1:-21732908 Msa0723760:CDS
AAGAACAGAATTCAAAAGAA+AGG 0.524526 5_1:-21733051 Msa0723760:CDS
TCCGACTTCTTCATCCACTC+TGG 0.524933 5_1:+21727701 None:intergenic
ACTTGATGACCTCACATTGT+GGG 0.525165 5_1:+21731244 None:intergenic
ATTTCACGGGTAACACTTTG+GGG 0.525297 5_1:+21728104 None:intergenic
AGAGGAATTAGACGAGGTCA+AGG 0.526864 5_1:-21730771 Msa0723760:CDS
AAGAAAAGTTATATCTGTTG+AGG 0.527724 5_1:-21731195 Msa0723760:CDS
GAGGAGGATCAATGCACGAT+TGG 0.527914 5_1:+21730718 None:intergenic
CAACGCTGAATCAGGTTTGG+CGG 0.528250 5_1:+21727658 None:intergenic
GCACATACTTCAGCATCCTT+AGG 0.528289 5_1:-21730687 Msa0723760:intron
TTATTTCGGGTACAAGGCTA+GGG 0.529406 5_1:-21734877 Msa0723760:five_prime_UTR
TGAATCAAACTCTGGATGCA+TGG 0.529450 5_1:+21727027 None:intergenic
TTTGGAAGTAGACGTGGTCG+AGG 0.529770 5_1:-21731686 Msa0723760:CDS
AAAGTATGTGCAGCTTCTGC+TGG 0.530097 5_1:+21730049 None:intergenic
GTATGTGCTGGTGGTGGAGG+AGG 0.531235 5_1:+21730702 None:intergenic
CCTAGGGAAGTGGAAGGTTG+TGG 0.531936 5_1:+21733303 None:intergenic
TCTAAAGCTTATCGAGCCTC+CGG 0.532599 5_1:+21727631 None:intergenic
GAGAAAGGACTTGTCTGTAG+AGG 0.532792 5_1:-21730287 Msa0723760:CDS
ACTTGATGGCCTCACAATGT+TGG 0.533295 5_1:+21730336 None:intergenic
AAGAATCGAATGCAAAAGAA+AGG 0.533404 5_1:-21732365 Msa0723760:CDS
AAAAGAAAGGCAGGGGCAAA+GGG 0.533586 5_1:-21732352 Msa0723760:CDS
ACAAACTTAGCCGATACTAA+GGG 0.534916 5_1:-21727785 Msa0723760:CDS
TTGCCTGTCAGTTTCTACAT+GGG 0.535013 5_1:+21732837 None:intergenic
AGTGTGGCAATCGGAGGTAG+AGG 0.535341 5_1:-21730789 Msa0723760:CDS
GCTGAAGTATGTGCTGGTGG+TGG 0.535939 5_1:+21730696 None:intergenic
CAAGATGCCAAAGGAAGGAC+TGG 0.536349 5_1:-21729422 Msa0723760:CDS
CACAGTAGATATAATTTCAC+GGG 0.537044 5_1:+21728091 None:intergenic
AAATGTATTGAGGCTGGTGG+AGG 0.539543 5_1:-21732862 Msa0723760:CDS
AAATATATTAGTGTGGCAAT+CGG 0.540688 5_1:-21730798 Msa0723760:intron
GCCAGAAGTATGGAATGGTT+TGG 0.540818 5_1:-21727741 Msa0723760:CDS
GGATCAATGCACGGTTGAGA+AGG 0.541753 5_1:+21732533 None:intergenic
TCTGAAAATGATGAATACTA+CGG 0.545308 5_1:-21730487 Msa0723760:CDS
GCTCCCATTATTGGAAACTC+CGG 0.546051 5_1:+21729174 None:intergenic
AGAGTATTCATCACTCTCTC+CGG 0.547828 5_1:+21729348 None:intergenic
GAATTGCCAATAACTAAGCT+AGG 0.548323 5_1:+21726950 None:intergenic
CACTTGATGACCTCACATTG+TGG 0.548720 5_1:+21731243 None:intergenic
TGTATGAATATGTGAAATGC+AGG 0.549207 5_1:-21726455 Msa0723760:three_prime_UTR
TCTAAACGTGCTCAAGGGAG+AGG 0.553456 5_1:-21733339 Msa0723760:CDS
TCTACTTCACATGCAGATAC+CGG 0.553472 5_1:-21726917 Msa0723760:CDS
ATTACTCGTGGTCAAGGGAG+AGG 0.553557 5_1:-21732575 Msa0723760:CDS
CCACAACCTTCCACTTCCCT+AGG 0.553869 5_1:-21733303 Msa0723760:intron
TGAAGAGATGCAGCTCATCA+TGG 0.555440 5_1:-21730446 Msa0723760:CDS
TACAGTGCGTGAGGGACCAC+CGG 0.556687 5_1:+21726898 None:intergenic
AGAGTTTGATTCAGAAGTGT+GGG 0.556866 5_1:-21727017 Msa0723760:CDS
AGAAGATCTAAACGTGCTCA+AGG 0.557067 5_1:-21733345 Msa0723760:CDS
ATAGAATTCAAAAGAAAGGA+CGG 0.559225 5_1:-21731472 Msa0723760:CDS
ATCACCTCTGTGAAAGAATG+TGG 0.559283 5_1:+21729665 None:intergenic
TCACAGTAGATATAATTTCA+CGG 0.559778 5_1:+21728090 None:intergenic
ATCTGCATGTGAAGTAGACA+TGG 0.560277 5_1:+21726922 None:intergenic
TGGAGTTACCAATCATAGAA+AGG 0.560998 5_1:+21726786 None:intergenic
GAAGACCCTGACTATGATGA+TGG 0.562328 5_1:-21729304 Msa0723760:CDS
AGAAAGGACTTGTCTGTAGA+GGG 0.564583 5_1:-21730286 Msa0723760:CDS
TGATTCAGAAGTGTGGGCAG+AGG 0.564725 5_1:-21727011 Msa0723760:CDS
CAATGTGAGGTCATCAAGTG+TGG 0.565550 5_1:-21731240 Msa0723760:CDS
AGCAACAAATGCAAATAATG+TGG 0.567129 5_1:-21731297 Msa0723760:CDS
GGGCCCATGCCCCTTAGTAT+CGG 0.567429 5_1:+21727775 None:intergenic
AGAGGTCACAGTGATCTACC+AGG 0.568359 5_1:-21732557 Msa0723760:CDS
TTCACCACCAGCACATACTT+CGG 0.568674 5_1:-21731618 Msa0723760:CDS
AGAGGTCGAAGTAATCTACC+AGG 0.571005 5_1:-21731662 Msa0723760:CDS
AGGTGATACTTCTGCCACAA+TGG 0.571388 5_1:-21729649 Msa0723760:CDS
GATCCCATGTAGAAACTGAC+AGG 0.572016 5_1:-21732840 Msa0723760:CDS
CAGAGTTTGATTCAGAAGTG+TGG 0.573450 5_1:-21727018 Msa0723760:CDS
TGTAGAAGCTGATAGGAGAA+AGG 0.573479 5_1:-21730302 Msa0723760:CDS
ATTAGACGAGGTCAAGGGAG+AGG 0.575379 5_1:-21730765 Msa0723760:CDS
CTACAGGTATGAAGAATGAC+AGG 0.575538 5_1:-21729447 Msa0723760:intron
GAACAAGCAACTGTTTATGC+GGG 0.575613 5_1:-21726612 Msa0723760:three_prime_UTR
TCATTCTGTTCAGAATTGAA+AGG 0.576136 5_1:+21732982 None:intergenic
CATGTTCATAAGAGGAAAGG+TGG 0.576673 5_1:-21727422 Msa0723760:CDS
TTGGACTTTCCAACATTGTG+AGG 0.577934 5_1:-21730345 Msa0723760:CDS
TTGGACTTTCCCACAATGTG+AGG 0.578530 5_1:-21731253 Msa0723760:CDS
GAAGACAACAACTACAATGA+TGG 0.579085 5_1:-21732958 Msa0723760:CDS
CAGTGTTCAAAGGAAAGGAC+TGG 0.582499 5_1:-21730560 Msa0723760:CDS
CAAACTGAAACAGTTTAGAT+CGG 0.582572 5_1:+21734792 None:intergenic
TTCCACTTCGCAGCTGGAGT+AGG 0.584486 5_1:+21728056 None:intergenic
AATGACAGTGTTCAAAGGAA+AGG 0.585173 5_1:-21730565 Msa0723760:CDS
GTACATACTTCGGTTTCCAC+AGG 0.585209 5_1:-21732497 Msa0723760:intron
TTGGACTTTCCAACAATGTG+AGG 0.585727 5_1:-21732148 Msa0723760:CDS
TATGATATCTAGAAGCAACT+TGG 0.586377 5_1:+21733385 None:intergenic
ACTAAGGGGCATGGGCCCAA+AGG 0.589643 5_1:-21727770 Msa0723760:CDS
CAAAGGAAGGACTGGTTAAG+GGG 0.589985 5_1:-21729414 Msa0723760:CDS
TGCCTACTCCAGCTGCGAAG+TGG 0.590435 5_1:-21728058 Msa0723760:CDS
AAAGGAAAGGACTGGTTAAG+GGG 0.590715 5_1:-21730552 Msa0723760:CDS
TTGAGTGGAAGATCTGGTGT+AGG 0.590748 5_1:-21729079 Msa0723760:CDS
ATAACAATGACAGTGTTCAA+AGG 0.594115 5_1:-21730570 Msa0723760:CDS
TGATGGGGAAGATAAAGAGA+TGG 0.594798 5_1:-21729287 Msa0723760:CDS
GCCACAACCAGTACATACTT+CGG 0.595119 5_1:-21732507 Msa0723760:CDS
AGAAAAGTTACATCTGTAGA+GGG 0.596487 5_1:-21732089 Msa0723760:CDS
CCACACCCAACTCATCCACC+AGG 0.599135 5_1:-21729124 Msa0723760:CDS
CGAATGCAAAAGAAAGGCAG+GGG 0.599557 5_1:-21732359 Msa0723760:CDS
ATTCTGCCAGCTACCATAGT+CGG 0.602070 5_1:+21729695 None:intergenic
CAACTGTTTATGCGGGCATG+TGG 0.603459 5_1:-21726605 Msa0723760:three_prime_UTR
AGCAACTGATGCAAATAATG+TGG 0.605781 5_1:-21732192 Msa0723760:CDS
TGATGATGATTGAGTTGTTG+AGG 0.606877 5_1:-21726695 Msa0723760:three_prime_UTR
ACATGGAAATCAGAGGTAGA+CGG 0.607083 5_1:-21732598 Msa0723760:intron
AAGGATGCTGAAGTATGTGC+TGG 0.608540 5_1:+21730690 None:intergenic
CTTAACTCACTCACCCATTG+TGG 0.608656 5_1:+21729635 None:intergenic
AACATTGTGAGGCCATCAAG+TGG 0.608738 5_1:-21730334 Msa0723760:CDS
AATGTGAAACAATGTAATGG+AGG 0.609133 5_1:-21729202 Msa0723760:CDS
AGGAACAAGATGCCAAAGGA+AGG 0.610011 5_1:-21729427 Msa0723760:CDS
ATGCATGATTGAGAAGGCCC+TGG 0.610240 5_1:+21730079 None:intergenic
TCGAATGCAAAAGAAAGGCA+GGG 0.611650 5_1:-21732360 Msa0723760:CDS
TTAGCCGATACTAAGGGGCA+TGG 0.611694 5_1:-21727779 Msa0723760:CDS
ACTATGAAGTTGGAAAAGTA+CGG 0.612145 5_1:-21727061 Msa0723760:CDS
TGTTCATAAGAGGAAAGGTG+GGG 0.613617 5_1:-21727420 Msa0723760:CDS
ATGTACGATTGAGAAGGCCC+TGG 0.614162 5_1:+21731644 None:intergenic
AAGACCCTGACTATGATGAT+GGG 0.614372 5_1:-21729303 Msa0723760:CDS
TTATATCTACTGTGATTGCA+CGG 0.616619 5_1:-21728082 Msa0723760:CDS
CTGAAGCCAGAAGTATGGAA+TGG 0.617594 5_1:-21727746 Msa0723760:CDS
GGATCAATGCACGATTGGGA+AGG 0.618133 5_1:+21730723 None:intergenic
CTTCCCCATCATCATAGTCA+GGG 0.618166 5_1:+21729299 None:intergenic
GAGGAATTAGACGAGGTCAA+GGG 0.618538 5_1:-21730770 Msa0723760:CDS
AAGAAAAGTTATATCTATCG+AGG 0.618632 5_1:-21729047 Msa0723760:CDS
TGTCGGGTATGAATAAGAAG+AGG 0.618635 5_1:-21726988 Msa0723760:CDS
AGTTGGAGCTACAGTGCGTG+AGG 0.619689 5_1:+21726889 None:intergenic
AGTTTCCAATAATGGGAGCA+TGG 0.619779 5_1:-21729170 Msa0723760:CDS
GACGGATTACTCGTGGTCAA+GGG 0.620890 5_1:-21732580 Msa0723760:CDS
ATGTTCATAAGAGGAAAGGT+GGG 0.623734 5_1:-21727421 Msa0723760:CDS
GCAATATTGCAAGAATAGTG+TGG 0.624588 5_1:-21727883 Msa0723760:CDS
GCACATACTTCGGTTACCCC+AGG 0.624905 5_1:-21731608 Msa0723760:intron
GATTCAGCGTTGCACACCGG+AGG 0.626105 5_1:-21727647 Msa0723760:CDS
TAGAGAACATAAGAAGAGGA+TGG 0.627247 5_1:-21727612 Msa0723760:intron
AGAACAAGCAACTGTTTATG+CGG 0.627489 5_1:-21726613 Msa0723760:three_prime_UTR
ACCAGAGTGGATGAAGAAGT+CGG 0.627977 5_1:-21727702 Msa0723760:CDS
ATGCGACAAGCACTGTCGAA+AGG 0.629640 5_1:-21726764 Msa0723760:CDS
GCTTTAGAGAACATAAGAAG+AGG 0.630283 5_1:-21727616 Msa0723760:CDS
ATGCACGGTTGAGAAGGCCC+TGG 0.632097 5_1:+21732539 None:intergenic
GAATCAATGTACGATTGAGA+AGG 0.633688 5_1:+21731638 None:intergenic
TATATTAGTGTGGCAATCGG+AGG 0.635901 5_1:-21730795 Msa0723760:intron
GCTCATGTTCATAAGAGGAA+AGG 0.635977 5_1:-21727425 Msa0723760:CDS
TAGCCGATACTAAGGGGCAT+GGG 0.636705 5_1:-21727778 Msa0723760:CDS
TTACCAATCATAGAAAGGAT+GGG 0.638324 5_1:+21726791 None:intergenic
CATGATTGAGAAGGCCCTGG+TGG 0.638397 5_1:+21730082 None:intergenic
GTGGAAACCGAAGTATGTAC+TGG 0.642991 5_1:+21732500 None:intergenic
TTGGAAGTAGACGTGGTCGA+GGG 0.643652 5_1:-21731685 Msa0723760:CDS
AGAATTCAAAAGAAAGGACG+GGG 0.645298 5_1:-21731470 Msa0723760:CDS
AGAGGTCGTAGTGATCCACC+AGG 0.645416 5_1:-21730097 Msa0723760:CDS
GAAGATCTAAACGTGCTCAA+GGG 0.645850 5_1:-21733344 Msa0723760:CDS
GGGGTAACCGAAGTATGTGC+TGG 0.646870 5_1:+21731611 None:intergenic
TCACCTCTGTGAAAGAATGT+GGG 0.647464 5_1:+21729666 None:intergenic
AATGTGAGGTCATCAAGTGT+GGG 0.648999 5_1:-21731239 Msa0723760:CDS
AACATGACAATCAGACGTAG+AGG 0.651220 5_1:-21730139 Msa0723760:intron
AATGTGAGGTCATCAAGCGT+AGG 0.654609 5_1:-21732134 Msa0723760:CDS
ACACTACACCAATAATGTTG+GGG 0.656019 5_1:-21731381 Msa0723760:CDS
TCCTTACCTAGGGAAGTGGA+AGG 0.658226 5_1:+21733297 None:intergenic
TGACAGGAACAAGATGCCAA+AGG 0.662805 5_1:-21729431 Msa0723760:CDS
ATTGTGAGGCCATCAAGTGG+AGG 0.663696 5_1:-21730331 Msa0723760:CDS
TGTGGCGGTGGATCAATGCA+CGG 0.664428 5_1:+21732524 None:intergenic
GTTCATAAGAGGAAAGGTGG+GGG 0.664986 5_1:-21727419 Msa0723760:CDS
TATCATAACATGGTAGTCCG+AGG 0.665798 5_1:-21733369 Msa0723760:exon
GTTGGAGCTACAGTGCGTGA+GGG 0.667363 5_1:+21726890 None:intergenic
CAAACTTAGCCGATACTAAG+GGG 0.671072 5_1:-21727784 Msa0723760:CDS
CCTGATTCAGCGTTGCACAC+CGG 0.671961 5_1:-21727650 Msa0723760:CDS
GAATCAATGCATGATTGAGA+AGG 0.674897 5_1:+21730073 None:intergenic
AGAGGTAGACGGATTACTCG+TGG 0.682763 5_1:-21732587 Msa0723760:CDS
TGCTTCTAGATATCATAACA+TGG 0.683832 5_1:-21733379 Msa0723760:exon
GAAGTTGGGTCGTTGCCTGG+TGG 0.688462 5_1:+21729109 None:intergenic
GATGCTGAAGTATGTGCTGG+TGG 0.691487 5_1:+21730693 None:intergenic
CACCTCTGTGAAAGAATGTG+GGG 0.697953 5_1:+21729667 None:intergenic
AGACGTAGAGGAATTAAGCG+TGG 0.705438 5_1:-21730127 Msa0723760:CDS
ACTTCACATGCAGATACCGG+TGG 0.706906 5_1:-21726914 Msa0723760:CDS
GTAACCGAAGTATGTGCTGG+TGG 0.707632 5_1:+21731614 None:intergenic
AGACCCTGACTATGATGATG+GGG 0.709829 5_1:-21729302 Msa0723760:CDS
GAGGTCACAGTGATCTACCA+GGG 0.714646 5_1:-21732556 Msa0723760:CDS
TCTGCATGTGAAGTAGACAT+GGG 0.716560 5_1:+21726923 None:intergenic
CACCCCACATTCTTTCACAG+AGG 0.718926 5_1:-21729669 Msa0723760:CDS
GAGGTCGAAGTAATCTACCA+GGG 0.720893 5_1:-21731661 Msa0723760:CDS
GAAGTATGTACTGGTTGTGG+CGG 0.721902 5_1:+21732509 None:intergenic
GAGGTTGTAGTGATCCACCA+AGG 0.733031 5_1:-21730746 Msa0723760:CDS
GGAGGTAGAGGAATTAGACG+AGG 0.760177 5_1:-21730777 Msa0723760:CDS
GAGGTCGTAGTGATCCACCA+GGG 0.774816 5_1:-21730096 Msa0723760:CDS
ACATCTGGTTGAAACCAGAG+TGG 0.784841 5_1:-21727715 Msa0723760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTTATATTATATAT+TGG - chr5_1:21733412-21733431 Msa0723760:intron 0.0%
!! GTAAATAAATATCTTTAATA+TGG - chr5_1:21729634-21729653 Msa0723760:intron 10.0%
!! ATTTATAAAATTAAATACCT+GGG + chr5_1:21729766-21729785 None:intergenic 10.0%
!!! AAAAGTATTTATATATAACT+TGG + chr5_1:21731195-21731214 None:intergenic 10.0%
!!! AAATTATAATACATTTTGTT+TGG + chr5_1:21733848-21733867 None:intergenic 10.0%
!! TTTCAATAAATGTTAATTAT+AGG - chr5_1:21733865-21733884 Msa0723760:intron 10.0%
!! CACAAATATAAATAAAATTA+AGG + chr5_1:21734200-21734219 None:intergenic 10.0%
!! AATGAAATTTGAAGAAATAA+AGG + chr5_1:21726653-21726672 None:intergenic 15.0%
!! ATTAAAAAAAGACAGAAAAA+TGG + chr5_1:21727874-21727893 None:intergenic 15.0%
!!! TCTTTTTTGTTTGATATTTA+TGG - chr5_1:21728598-21728617 Msa0723760:intron 15.0%
!! AAATTGAAAATAGTTGAAAA+TGG - chr5_1:21729408-21729427 Msa0723760:CDS 15.0%
!! AAAGATATTTATTTACAACT+TGG + chr5_1:21729630-21729649 None:intergenic 15.0%
!! TTTATAAAATTAAATACCTG+GGG + chr5_1:21729765-21729784 None:intergenic 15.0%
!! CATTTATAAAATTAAATACC+TGG + chr5_1:21729767-21729786 None:intergenic 15.0%
!!! ATTTTATAAATGTTTGCATA+TGG - chr5_1:21729775-21729794 Msa0723760:intron 15.0%
!!! GAACAATATTTTAACTTTTA+AGG + chr5_1:21730357-21730376 None:intergenic 15.0%
!!! CATGTTATTTGTTTTTTTTA+GGG + chr5_1:21730444-21730463 None:intergenic 15.0%
!!! ACATGTTATTTGTTTTTTTT+AGG + chr5_1:21730445-21730464 None:intergenic 15.0%
!! TGTATATAAATATATTAGTG+TGG - chr5_1:21730549-21730568 Msa0723760:CDS 15.0%
!! ATTATGATAAAACAGAATAA+AGG + chr5_1:21731539-21731558 None:intergenic 15.0%
!! AGAAATTATATATATCATGT+TGG + chr5_1:21731822-21731841 None:intergenic 15.0%
!!! ATTTCTTTTAAGTATATGAT+TGG - chr5_1:21731836-21731855 Msa0723760:intron 15.0%
!! AACTTGAAAATATATATTGT+TGG - chr5_1:21732508-21732527 Msa0723760:CDS 15.0%
!! TTTAAAAAATGCTAGAAAAA+CGG - chr5_1:21733526-21733545 Msa0723760:intron 15.0%
!!! TACTTATATGCTTTATATTT+TGG - chr5_1:21733803-21733822 Msa0723760:intron 15.0%
!!! ACTTATATGCTTTATATTTT+GGG - chr5_1:21733804-21733823 Msa0723760:intron 15.0%
!! AATTAAGCCACTAATAAAAT+TGG + chr5_1:21726448-21726467 None:intergenic 20.0%
!!! AATTTTATTAGTGGCTTAAT+TGG - chr5_1:21726447-21726466 Msa0723760:three_prime_UTR 20.0%
!! CTTCATAAAATTCAAATAGA+CGG - chr5_1:21726740-21726759 Msa0723760:CDS 20.0%
!! TGAAATTATACATGCAATTT+AGG - chr5_1:21727831-21727850 Msa0723760:CDS 20.0%
!! TATTTATAAACAACAACTAC+AGG - chr5_1:21728446-21728465 Msa0723760:intron 20.0%
!! TAACTCAAAAAAATGTATTG+AGG - chr5_1:21728482-21728501 Msa0723760:intron 20.0%
!! CAAAAAGTTATATCTTTAGA+GGG - chr5_1:21728537-21728556 Msa0723760:intron 20.0%
!! ATTTACCAAGAAATAGAAAT+AGG - chr5_1:21728625-21728644 Msa0723760:intron 20.0%
!! AAAGATGATTATATACAACT+TGG + chr5_1:21728735-21728754 None:intergenic 20.0%
!! GTATATAATCATCTTTAACA+TGG - chr5_1:21728739-21728758 Msa0723760:intron 20.0%
!!! CTATTTTCAATTTCTTAACA+TGG + chr5_1:21729401-21729420 None:intergenic 20.0%
!!! GAACAGTATTTTAACTTTTA+AGG + chr5_1:21729445-21729464 None:intergenic 20.0%
!!! CAAGTTCTTTGTTTATTTTA+CGG + chr5_1:21729533-21729552 None:intergenic 20.0%
!! ATCTTTAATATGGAAATTAG+AGG - chr5_1:21729644-21729663 Msa0723760:intron 20.0%
!! TAATTGCATATGATTCATAT+TGG - chr5_1:21729814-21729833 Msa0723760:intron 20.0%
!! AAGAATAGAATTCAAAAGAA+AGG - chr5_1:21729878-21729897 Msa0723760:intron 20.0%
!! AATAATGTGGAAAACTATAA+TGG - chr5_1:21730070-21730089 Msa0723760:CDS 20.0%
!! GATCAAACATAATAGAAAAA+TGG + chr5_1:21730217-21730236 None:intergenic 20.0%
!! CTATTATGTTTGATCATTTA+TGG - chr5_1:21730222-21730241 Msa0723760:intron 20.0%
!! TATAAATATTGTCTTGAAAG+TGG - chr5_1:21730320-21730339 Msa0723760:CDS 20.0%
!! AATAATGTGAAACAATGTAA+TGG - chr5_1:21732149-21732168 Msa0723760:CDS 20.0%
!!! ATTTAAGATACAATTTGAGA+TGG + chr5_1:21732403-21732422 None:intergenic 20.0%
!! ATATTCTACTATATGATCTT+TGG + chr5_1:21732747-21732766 None:intergenic 20.0%
!! TTTATATTATATATTGGTGC+AGG - chr5_1:21733418-21733437 Msa0723760:intron 20.0%
!! TTATATTATATATTGGTGCA+GGG - chr5_1:21733419-21733438 Msa0723760:intron 20.0%
!!! TTATAATACATTTTGTTTGG+TGG + chr5_1:21733845-21733864 None:intergenic 20.0%
!! CAATAAATGTTAATTATAGG+AGG - chr5_1:21733868-21733887 Msa0723760:intron 20.0%
!! GCACAAGTTAATATATTATA+TGG - chr5_1:21734008-21734027 Msa0723760:intron 20.0%
!! GATGCTACATAATTAATTTA+TGG - chr5_1:21734030-21734049 Msa0723760:intron 20.0%
!! AGTTAATGTTCTTATAACTT+TGG + chr5_1:21734127-21734146 None:intergenic 20.0%
!! TAGTTGATTATTTGTATATG+TGG - chr5_1:21734230-21734249 Msa0723760:intron 20.0%
!!! GATTCTTGATATATTGTTTT+AGG - chr5_1:21734259-21734278 Msa0723760:intron 20.0%
!! ATTGCTACCAATTTTATTAG+TGG - chr5_1:21726438-21726457 Msa0723760:three_prime_UTR 25.0%
! TAATTGGCTATGAGTTATTT+CGG - chr5_1:21726463-21726482 Msa0723760:three_prime_UTR 25.0%
!!! GGTTTGTTTTTTGTTTTTGA+GGG + chr5_1:21726794-21726813 None:intergenic 25.0%
!!! AGGTTTGTTTTTTGTTTTTG+AGG + chr5_1:21726795-21726814 None:intergenic 25.0%
! ATTATAGATATTTCAAGCCA+TGG - chr5_1:21726898-21726917 Msa0723760:CDS 25.0%
! ATAGAATATGTAATGCTAGT+TGG - chr5_1:21727090-21727109 Msa0723760:intron 25.0%
! AAATACTTAAGAATTGATCC+TGG - chr5_1:21727232-21727251 Msa0723760:intron 25.0%
! AGTATTTATAGTGTAGGTTT+CGG - chr5_1:21727447-21727466 Msa0723760:CDS 25.0%
! ATTGCATGTATAATTTCAAG+AGG + chr5_1:21727829-21727848 None:intergenic 25.0%
! TTAAAAAAAGTCCTTACCTA+GGG + chr5_1:21728070-21728089 None:intergenic 25.0%
! ATTAAAAAAAGTCCTTACCT+AGG + chr5_1:21728071-21728090 None:intergenic 25.0%
! AAGAACAGAATTCAAAAGAA+AGG - chr5_1:21728303-21728322 Msa0723760:intron 25.0%
! GCAAAAAGTTATATCTTTAG+AGG - chr5_1:21728536-21728555 Msa0723760:intron 25.0%
! CCTATAAAATTAAATACCTG+TGG + chr5_1:21728876-21728895 None:intergenic 25.0%
!!! CCACAGGTATTTAATTTTAT+AGG - chr5_1:21728873-21728892 Msa0723760:intron 25.0%
!! ATTTTATAGGTTCTTGCATA+TGG - chr5_1:21728886-21728905 Msa0723760:intron 25.0%
! TAATTGCATATGATGCATAT+TGG - chr5_1:21728925-21728944 Msa0723760:intron 25.0%
!! GATTTCTGCTTCTTATTTAA+TGG + chr5_1:21729034-21729053 None:intergenic 25.0%
! AATAATGTGGAACAGTTAAT+TGG - chr5_1:21729175-21729194 Msa0723760:CDS 25.0%
!! CAGTTAATTGGATCTAATTT+TGG - chr5_1:21729187-21729206 Msa0723760:CDS 25.0%
! ATCAAACAGAAATGAAAATC+AGG + chr5_1:21729318-21729337 None:intergenic 25.0%
! CATTTCTGTTTGATCATTTA+TGG - chr5_1:21729324-21729343 Msa0723760:CDS 25.0%
!! AATATGGAAATTAGAGGTTT+TGG - chr5_1:21729650-21729669 Msa0723760:CDS 25.0%
! ATAGAATTCAAAAGAAAGGA+CGG - chr5_1:21729882-21729901 Msa0723760:intron 25.0%
!!! AACTATAATGGATCCAATTT+TGG - chr5_1:21730082-21730101 Msa0723760:CDS 25.0%
! AAGAAAAGTTATATCTGTTG+AGG - chr5_1:21730159-21730178 Msa0723760:intron 25.0%
! AGAAAAGTTATATCTGTTGA+GGG - chr5_1:21730160-21730179 Msa0723760:intron 25.0%
! TTACAATTTCTACTTATGCA+TGG + chr5_1:21730478-21730497 None:intergenic 25.0%
! AAATATATTAGTGTGGCAAT+CGG - chr5_1:21730556-21730575 Msa0723760:CDS 25.0%
! TATGTAAAGTGAAATACCTA+AGG + chr5_1:21730686-21730705 None:intergenic 25.0%
! TAGGTATTTCACTTTACATA+TGG - chr5_1:21730686-21730705 Msa0723760:intron 25.0%
! TCTGAAAATGATGAATACTA+CGG - chr5_1:21730867-21730886 Msa0723760:intron 25.0%
! AATAACGTGACAAAATGTAT+TGG - chr5_1:21730978-21730997 Msa0723760:intron 25.0%
! TTACATAAAGTGAAATACCT+GGG + chr5_1:21731337-21731356 None:intergenic 25.0%
! ATTACATAAAGTGAAATACC+TGG + chr5_1:21731338-21731357 None:intergenic 25.0%
! CTTTATGTAATACTTGCATA+TGG - chr5_1:21731347-21731366 Msa0723760:CDS 25.0%
! TAGAAAAGTTCAGAAATGAA+AGG + chr5_1:21731750-21731769 None:intergenic 25.0%
! TACTCACAATATATATGTCA+AGG - chr5_1:21731768-21731787 Msa0723760:intron 25.0%
! AAGAAAAGTTATATCTATCG+AGG - chr5_1:21732307-21732326 Msa0723760:CDS 25.0%
!! AAGCAAAATTAACATGGTTT+TGG + chr5_1:21732360-21732379 None:intergenic 25.0%
!! TATGTTGTTTATTGCTTGTA+AGG - chr5_1:21732681-21732700 Msa0723760:intron 25.0%
! ATGCACTTCAATTATCATTA+TGG - chr5_1:21732854-21732873 Msa0723760:CDS 25.0%
!!! TTATCACTGATTTATTCCAA+CGG + chr5_1:21732901-21732920 None:intergenic 25.0%
! TAATATGGTATGGTTTACAT+TGG + chr5_1:21733153-21733172 None:intergenic 25.0%
! TTAAACTCGAAGTAAGAAAT+TGG + chr5_1:21733206-21733225 None:intergenic 25.0%
! TCACAGTAGATATAATTTCA+CGG + chr5_1:21733267-21733286 None:intergenic 25.0%
! AGATTATCCAATTGAAATGA+AGG - chr5_1:21733321-21733340 Msa0723760:CDS 25.0%
! AATGAAGGATGAGTTATTTA+AGG - chr5_1:21733336-21733355 Msa0723760:CDS 25.0%
! TGAGTTATTTAAGGAATTCA+TGG - chr5_1:21733345-21733364 Msa0723760:CDS 25.0%
!! TTTTTAAATGATCAGGATAG+CGG + chr5_1:21733514-21733533 None:intergenic 25.0%
!!! CTAGCATTTTTTAAATGATC+AGG + chr5_1:21733521-21733540 None:intergenic 25.0%
! TTTATATGACACTATGAAGT+TGG - chr5_1:21734283-21734302 Msa0723760:intron 25.0%
! TCCAACTGAAGAATATATTA+AGG - chr5_1:21734481-21734500 Msa0723760:intron 25.0%
! TCCTTAATATATTCTTCAGT+TGG + chr5_1:21734485-21734504 None:intergenic 25.0%
! ATAACAAAAGATAGCTGAAT+TGG + chr5_1:21734697-21734716 None:intergenic 25.0%
!!! GTTATTCTGTTTCTGTTTTA+TGG - chr5_1:21734712-21734731 Msa0723760:intron 25.0%
! AATTGGCTATGAGTTATTTC+GGG - chr5_1:21726464-21726483 Msa0723760:three_prime_UTR 30.0%
CAAACTGAAACAGTTTAGAT+CGG + chr5_1:21726565-21726584 None:intergenic 30.0%
!! CTATCGTTTTTATTGCTGAT+TGG - chr5_1:21726676-21726695 Msa0723760:three_prime_UTR 30.0%
GATGTATTAATGAGTCTGTT+AGG - chr5_1:21726920-21726939 Msa0723760:CDS 30.0%
CTAGCATTACATATTCTATG+TGG + chr5_1:21727089-21727108 None:intergenic 30.0%
TGAGCTAGTATTTATAGTGT+AGG - chr5_1:21727441-21727460 Msa0723760:CDS 30.0%
GTATTTATAGTGTAGGTTTC+GGG - chr5_1:21727448-21727467 Msa0723760:CDS 30.0%
AAATGCATCAATGAAAGAAG+TGG - chr5_1:21727740-21727759 Msa0723760:CDS 30.0%
AATGCATCAATGAAAGAAGT+GGG - chr5_1:21727741-21727760 Msa0723760:CDS 30.0%
ATGTATAATTTCAAGAGGCA+AGG + chr5_1:21727824-21727843 None:intergenic 30.0%
TATGATATCTAGAAGCAACT+TGG + chr5_1:21727972-21727991 None:intergenic 30.0%
TGCTTCTAGATATCATAACA+TGG - chr5_1:21727975-21727994 Msa0723760:intron 30.0%
TCATTCTGTTCAGAATTGAA+AGG + chr5_1:21728375-21728394 None:intergenic 30.0%
TCAAAAAAATGTATTGAGGC+TGG - chr5_1:21728486-21728505 Msa0723760:intron 30.0%
CAAAAAAGAAAAACAGCAAG+TGG + chr5_1:21728587-21728606 None:intergenic 30.0%
!! CAAGTCCTATTTCTATTTCT+TGG + chr5_1:21728633-21728652 None:intergenic 30.0%
ATCTTTAACATGGAAATCAG+AGG - chr5_1:21728749-21728768 Msa0723760:intron 30.0%
! CTCACTATTTCTTGATCTAT+AGG - chr5_1:21728953-21728972 Msa0723760:intron 30.0%
AAGAATCGAATGCAAAAGAA+AGG - chr5_1:21728989-21729008 Msa0723760:intron 30.0%
AGAAAAGTTACATCTGTAGA+GGG - chr5_1:21729265-21729284 Msa0723760:CDS 30.0%
CTGTTTGATCATTTATGGTT+TGG - chr5_1:21729329-21729348 Msa0723760:CDS 30.0%
!!! GCATTTGGCTTTTTATTTCA+TGG + chr5_1:21729359-21729378 None:intergenic 30.0%
CTAGACAATATACCTGTATT+TGG - chr5_1:21729469-21729488 Msa0723760:intron 30.0%
CATGTTAAGAAACCAAATAC+AGG + chr5_1:21729484-21729503 None:intergenic 30.0%
TAGAATTCAAAAGAAAGGAC+GGG - chr5_1:21729883-21729902 Msa0723760:intron 30.0%
AACACTACACCAATAATGTT+GGG - chr5_1:21729972-21729991 Msa0723760:intron 30.0%
AGCAACAAATGCAAATAATG+TGG - chr5_1:21730057-21730076 Msa0723760:CDS 30.0%
AATGCTATTAATTGCTCTAG+AGG - chr5_1:21730274-21730293 Msa0723760:CDS 30.0%
CAAGACAATATTCCTGTATT+TGG - chr5_1:21730381-21730400 Msa0723760:CDS 30.0%
ACATCATGTAATTGCATATG+AGG - chr5_1:21730717-21730736 Msa0723760:CDS 30.0%
! CTCATTATTTCTTGTTCTAC+AGG - chr5_1:21730753-21730772 Msa0723760:CDS 30.0%
ATAACAATGACAGTGTTCAA+AGG - chr5_1:21730784-21730803 Msa0723760:CDS 30.0%
AAATGTATTGGAGACAGATT+TGG - chr5_1:21730990-21731009 Msa0723760:intron 30.0%
! CACTTCTGTTTTATCGTTTA+TGG - chr5_1:21731116-21731135 Msa0723760:intron 30.0%
TACATAAAGTGAAATACCTG+GGG + chr5_1:21731336-21731355 None:intergenic 30.0%
AAACTGTTATACTTAGAGAG+TGG - chr5_1:21731453-21731472 Msa0723760:CDS 30.0%
CATGTGATCAAATATATCAC+TGG - chr5_1:21731478-21731497 Msa0723760:CDS 30.0%
ACAGAATAAAGGAGAAAACA+GGG + chr5_1:21731528-21731547 None:intergenic 30.0%
AACAGAATAAAGGAGAAAAC+AGG + chr5_1:21731529-21731548 None:intergenic 30.0%
TTAGAAATAGAATTGCACAG+CGG - chr5_1:21731570-21731589 Msa0723760:intron 30.0%
CCATTACATCATTAAAGCAA+CGG + chr5_1:21731603-21731622 None:intergenic 30.0%
! TTTGTTATCCTGAAACTTCA+AGG - chr5_1:21731628-21731647 Msa0723760:CDS 30.0%
ACAATATATATGTCAAGGTG+CGG - chr5_1:21731773-21731792 Msa0723760:intron 30.0%
ATATGATTGGCATAATCTAC+AGG - chr5_1:21731849-21731868 Msa0723760:intron 30.0%
AAATTTACTGCTGTTAGTTC+CGG - chr5_1:21731987-21732006 Msa0723760:intron 30.0%
ATAAAGAGATGGAACTCATT+CGG - chr5_1:21732078-21732097 Msa0723760:CDS 30.0%
AATGTGAAACAATGTAATGG+AGG - chr5_1:21732152-21732171 Msa0723760:CDS 30.0%
GTGCATAAGCAAAATTAACA+TGG + chr5_1:21732366-21732385 None:intergenic 30.0%
!!! AGCAAGCATGTGTTTTAAAA+TGG + chr5_1:21732447-21732466 None:intergenic 30.0%
ATCACATGTAACAGTATTGT+TGG + chr5_1:21732480-21732499 None:intergenic 30.0%
CCTATAAAATTGTGTCTCAT+TGG + chr5_1:21732589-21732608 None:intergenic 30.0%
! CCAATGAGACACAATTTTAT+AGG - chr5_1:21732586-21732605 Msa0723760:CDS 30.0%
TTATTGCTTGTAAGGTGATT+TGG - chr5_1:21732689-21732708 Msa0723760:intron 30.0%
!! TATCACTGATTTATTCCAAC+GGG + chr5_1:21732900-21732919 None:intergenic 30.0%
ACTATCAAGCAAAGTAGATA+TGG - chr5_1:21732939-21732958 Msa0723760:CDS 30.0%
! TATACTATACATGATGGTGT+TGG + chr5_1:21733020-21733039 None:intergenic 30.0%
TGTAAACCATACCATATTAC+TGG - chr5_1:21733154-21733173 Msa0723760:intron 30.0%
!! TTGGTTTGGCAAATTAGATA+TGG + chr5_1:21733187-21733206 None:intergenic 30.0%
CACAGTAGATATAATTTCAC+GGG + chr5_1:21733266-21733285 None:intergenic 30.0%
TTATATCTACTGTGATTGCA+CGG - chr5_1:21733272-21733291 Msa0723760:intron 30.0%
AACTCATCCTTCATTTCAAT+TGG + chr5_1:21733331-21733350 None:intergenic 30.0%
! GGGTAAATACAATTTTGCAT+CGG - chr5_1:21733439-21733458 Msa0723760:intron 30.0%
!! AATTTATGGCTCTTGCTATT+AGG - chr5_1:21734044-21734063 Msa0723760:intron 30.0%
AACTTGAGTATTCAATGCAT+TGG + chr5_1:21734104-21734123 None:intergenic 30.0%
ACTATGAAGTTGGAAAAGTA+CGG - chr5_1:21734293-21734312 Msa0723760:intron 30.0%
TTACCAATCATAGAAAGGAT+GGG + chr5_1:21734566-21734585 None:intergenic 30.0%
! GCCTATAGTATTACTGATTA+AGG - chr5_1:21734781-21734800 Msa0723760:five_prime_UTR 30.0%
GCCTTAATCAGTAATACTAT+AGG + chr5_1:21734785-21734804 None:intergenic 30.0%
!!! GTACTTTCTTTTTGAAGCAT+TGG - chr5_1:21734861-21734880 Msa0723760:five_prime_UTR 30.0%
TGTATGAATATGTGAAATGC+AGG - chr5_1:21734899-21734918 Msa0723760:five_prime_UTR 30.0%
! TATGAGTTATTTCGGGTACA+AGG - chr5_1:21726471-21726490 Msa0723760:three_prime_UTR 35.0%
!! TCGATTTGGAGTTTCAAATC+TGG - chr5_1:21726591-21726610 Msa0723760:three_prime_UTR 35.0%
! AAAACAGAAGAGTGTAGAGA+TGG + chr5_1:21726620-21726639 None:intergenic 35.0%
TTCATAAACCCTTGTGGTTA+GGG + chr5_1:21726821-21726840 None:intergenic 35.0%
TAGTAGTTCATAAACCCTTG+TGG + chr5_1:21726827-21726846 None:intergenic 35.0%
CCTAACTTTCAAAATGCATC+CGG + chr5_1:21726874-21726893 None:intergenic 35.0%
CAGACTCATTAATACATCCA+TGG + chr5_1:21726918-21726937 None:intergenic 35.0%
TGATCATTGTAGATGCACAT+CGG - chr5_1:21726955-21726974 Msa0723760:CDS 35.0%
TAATGCTAGTTGGAGAATGA+TGG - chr5_1:21727100-21727119 Msa0723760:intron 35.0%
AATGCTAGTTGGAGAATGAT+GGG - chr5_1:21727101-21727120 Msa0723760:intron 35.0%
ACAGGATGAATTGAATGAGA+AGG - chr5_1:21727176-21727195 Msa0723760:intron 35.0%
TTGAATGAGAAGGATGCTAA+TGG - chr5_1:21727186-21727205 Msa0723760:intron 35.0%
!! GATTTGAGATCTTGAGTTGA+TGG - chr5_1:21727257-21727276 Msa0723760:intron 35.0%
AGTGGAATGATTGGTACTTT+AGG - chr5_1:21727387-21727406 Msa0723760:intron 35.0%
GTGGAATGATTGGTACTTTA+GGG - chr5_1:21727388-21727407 Msa0723760:CDS 35.0%
AATACTAGCTCATAGACACT+GGG + chr5_1:21727433-21727452 None:intergenic 35.0%
AAATACTAGCTCATAGACAC+TGG + chr5_1:21727434-21727453 None:intergenic 35.0%
AACTATGAACAGACAATGAG+AGG - chr5_1:21727536-21727555 Msa0723760:intron 35.0%
CTTAGAACATATGTTGGGTT+GGG - chr5_1:21727655-21727674 Msa0723760:CDS 35.0%
TCAAAAGAAAGGACCAGTAA+AGG - chr5_1:21728314-21728333 Msa0723760:intron 35.0%
CAAAAGAAAGGACCAGTAAA+GGG - chr5_1:21728315-21728334 Msa0723760:intron 35.0%
AATGCATCAAAACCCTTTAC+TGG + chr5_1:21728330-21728349 None:intergenic 35.0%
GAAGACAACAACTACAATGA+TGG - chr5_1:21728396-21728415 Msa0723760:intron 35.0%
AAAAAATGTATTGAGGCTGG+TGG - chr5_1:21728489-21728508 Msa0723760:intron 35.0%
AGCAACTGATGCAAATAATG+TGG - chr5_1:21729162-21729181 Msa0723760:CDS 35.0%
GAGAAAAGTTACATCTGTAG+AGG - chr5_1:21729264-21729283 Msa0723760:CDS 35.0%
TTTCTTAACATGTGTCACCA+GGG - chr5_1:21729492-21729511 Msa0723760:intron 35.0%
! TTTTACGGTCTTGCTAACAA+GGG + chr5_1:21729518-21729537 None:intergenic 35.0%
! ATTTTACGGTCTTGCTAACA+AGG + chr5_1:21729519-21729538 None:intergenic 35.0%
CTACAGTTTCTACGAATGAA+TGG + chr5_1:21729562-21729581 None:intergenic 35.0%
GAATCAATGTACGATTGAGA+AGG + chr5_1:21729719-21729738 None:intergenic 35.0%
ACACCTGTAGAACAAGAAAT+GGG + chr5_1:21729848-21729867 None:intergenic 35.0%
TGTTCTACAGGTGTCAAAAA+TGG - chr5_1:21729854-21729873 Msa0723760:intron 35.0%
AGAATTCAAAAGAAAGGACG+GGG - chr5_1:21729884-21729903 Msa0723760:intron 35.0%
GAACACTACACCAATAATGT+TGG - chr5_1:21729971-21729990 Msa0723760:intron 35.0%
ACACTACACCAATAATGTTG+GGG - chr5_1:21729973-21729992 Msa0723760:intron 35.0%
TTCATCTTCCCCAACATTAT+TGG + chr5_1:21729984-21730003 None:intergenic 35.0%
ATTGTGGGAAAGTCCAAAAT+TGG + chr5_1:21730098-21730117 None:intergenic 35.0%
!! TGCTCTAGAGGCATATATTA+AGG - chr5_1:21730286-21730305 Msa0723760:CDS 35.0%
CATGTTAAGGAACCAAATAC+AGG + chr5_1:21730396-21730415 None:intergenic 35.0%
TCTTACTAACAAATGTCCTC+AGG + chr5_1:21730421-21730440 None:intergenic 35.0%
TTGCATATGAGGCATATATG+TGG - chr5_1:21730728-21730747 Msa0723760:CDS 35.0%
AATGACAGTGTTCAAAGGAA+AGG - chr5_1:21730789-21730808 Msa0723760:CDS 35.0%
!! GAATACTACGGTTTTAGTGA+TGG - chr5_1:21730879-21730898 Msa0723760:intron 35.0%
AGAAGTGACAAATGACTTAC+GGG + chr5_1:21731103-21731122 None:intergenic 35.0%
CAGAAGTGACAAATGACTTA+CGG + chr5_1:21731104-21731123 None:intergenic 35.0%
GAATCAATGCATGATTGAGA+AGG + chr5_1:21731284-21731303 None:intergenic 35.0%
CAGAATAAAGGAGAAAACAG+GGG + chr5_1:21731527-21731546 None:intergenic 35.0%
! CCGTTGCTTTAATGATGTAA+TGG - chr5_1:21731600-21731619 Msa0723760:intron 35.0%
TAAAGAGATGGAACTCATTC+GGG - chr5_1:21732079-21732098 Msa0723760:CDS 35.0%
AATTCCGGAGTTTCCAATAA+TGG - chr5_1:21732176-21732195 Msa0723760:CDS 35.0%
ATTCCGGAGTTTCCAATAAT+GGG - chr5_1:21732177-21732196 Msa0723760:CDS 35.0%
ACTGTTACATGTGATTAGAG+AGG - chr5_1:21732485-21732504 Msa0723760:intron 35.0%
TAGATCACAAACTGCTATTG+TGG - chr5_1:21732618-21732637 Msa0723760:intron 35.0%
! GGTGATTTGGAAAAATCTCA+TGG - chr5_1:21732702-21732721 Msa0723760:intron 35.0%
ATATCCATTTCCATCAGGAA+GGG + chr5_1:21732987-21733006 None:intergenic 35.0%
ATGTCATATCCATTTCCATC+AGG + chr5_1:21732992-21733011 None:intergenic 35.0%
!! GCTTGCTATACTATACATGA+TGG + chr5_1:21733026-21733045 None:intergenic 35.0%
ATGATGCCAGTAATATGGTA+TGG + chr5_1:21733163-21733182 None:intergenic 35.0%
CTCGAAGTAAGAAATTGGTT+TGG + chr5_1:21733201-21733220 None:intergenic 35.0%
AATTTCACGGGTAACACTTT+GGG + chr5_1:21733254-21733273 None:intergenic 35.0%
TAATTTCACGGGTAACACTT+TGG + chr5_1:21733255-21733274 None:intergenic 35.0%
GCAATATTGCAAGAATAGTG+TGG - chr5_1:21733471-21733490 Msa0723760:intron 35.0%
AACAAACTTAGCCGATACTA+AGG - chr5_1:21733568-21733587 Msa0723760:intron 35.0%
ACAAACTTAGCCGATACTAA+GGG - chr5_1:21733569-21733588 Msa0723760:intron 35.0%
!! GCTTTAGAGAACATAAGAAG+AGG - chr5_1:21733738-21733757 Msa0723760:intron 35.0%
TAGAGAACATAAGAAGAGGA+TGG - chr5_1:21733742-21733761 Msa0723760:intron 35.0%
!!! ATTTTGTTTGGTGGACTGTA+GGG + chr5_1:21733836-21733855 None:intergenic 35.0%
ATGAGCGTAAACATCTCTAT+AGG + chr5_1:21733915-21733934 None:intergenic 35.0%
TTTACGCTCATGTTCATAAG+AGG - chr5_1:21733924-21733943 Msa0723760:intron 35.0%
ATGTTCATAAGAGGAAAGGT+GGG - chr5_1:21733933-21733952 Msa0723760:intron 35.0%
!!! ACTTTTAAAGAGTGCCCTTA+GGG - chr5_1:21734158-21734177 Msa0723760:intron 35.0%
! AGAGTTTGATTCAGAAGTGT+GGG - chr5_1:21734337-21734356 Msa0723760:intron 35.0%
GAATTGCCAATAACTAAGCT+AGG + chr5_1:21734407-21734426 None:intergenic 35.0%
GTTACCAATCATAGAAAGGA+TGG + chr5_1:21734567-21734586 None:intergenic 35.0%
TGGAGTTACCAATCATAGAA+AGG + chr5_1:21734571-21734590 None:intergenic 35.0%
! TGATGATGATTGAGTTGTTG+AGG - chr5_1:21734659-21734678 Msa0723760:intron 35.0%
AAACAGTTGCTTGTTCTTAG+CGG + chr5_1:21734738-21734757 None:intergenic 35.0%
AGAACAAGCAACTGTTTATG+CGG - chr5_1:21734741-21734760 Msa0723760:intron 35.0%
! TTATTTCGGGTACAAGGCTA+GGG - chr5_1:21726477-21726496 Msa0723760:three_prime_UTR 40.0%
ATCGCTTTCGATTCTACGAT+CGG - chr5_1:21726526-21726545 Msa0723760:three_prime_UTR 40.0%
TCAGTTTGCAGAACTCGATT+TGG - chr5_1:21726577-21726596 Msa0723760:three_prime_UTR 40.0%
AAACCTAAACCCTAACCACA+AGG - chr5_1:21726809-21726828 Msa0723760:CDS 40.0%
AACCTAAACCCTAACCACAA+GGG - chr5_1:21726810-21726829 Msa0723760:CDS 40.0%
GTTCATAAACCCTTGTGGTT+AGG + chr5_1:21726822-21726841 None:intergenic 40.0%
!! CCGGATGCATTTTGAAAGTT+AGG - chr5_1:21726871-21726890 Msa0723760:CDS 40.0%
CGGTAACAAAACATCGTATG+CGG - chr5_1:21726995-21727014 Msa0723760:CDS 40.0%
GTGGTTACTGCTAGTACAAA+AGG + chr5_1:21727070-21727089 None:intergenic 40.0%
TTAGAGCTTCGATGATGAAC+AGG - chr5_1:21727158-21727177 Msa0723760:intron 40.0%
CTCAAGATCTCAAATCTACC+AGG + chr5_1:21727253-21727272 None:intergenic 40.0%
!! CTTGAGTTGATGGTGTTGAA+TGG - chr5_1:21727267-21727286 Msa0723760:intron 40.0%
TGTTGAATGGTCTCTGAGTT+GGG - chr5_1:21727280-21727299 Msa0723760:intron 40.0%
! CTTCTTCTTTGGAGGAATGA+GGG - chr5_1:21727322-21727341 Msa0723760:intron 40.0%
TGTTCATAGTTGTCCCTTGA+GGG + chr5_1:21727527-21727546 None:intergenic 40.0%
ATGAACAGACAATGAGAGGA+TGG - chr5_1:21727540-21727559 Msa0723760:intron 40.0%
GTCCATACCATAGTCCTTAT+GGG - chr5_1:21727631-21727650 Msa0723760:CDS 40.0%
!! CATATGTTCTAAGGCCCATA+AGG + chr5_1:21727648-21727667 None:intergenic 40.0%
ATGGGCCTTAGAACATATGT+TGG - chr5_1:21727649-21727668 Msa0723760:CDS 40.0%
TGGGCCTTAGAACATATGTT+GGG - chr5_1:21727650-21727669 Msa0723760:CDS 40.0%
CCAACCCAACATATGTTCTA+AGG + chr5_1:21727657-21727676 None:intergenic 40.0%
CCTTAGAACATATGTTGGGT+TGG - chr5_1:21727654-21727673 Msa0723760:CDS 40.0%
TCTGCTTCATCTGCTAATGT+GGG + chr5_1:21727705-21727724 None:intergenic 40.0%
TTCTGCTTCATCTGCTAATG+TGG + chr5_1:21727706-21727725 None:intergenic 40.0%
TATCATAACATGGTAGTCCG+AGG - chr5_1:21727985-21728004 Msa0723760:intron 40.0%
AGAAGATCTAAACGTGCTCA+AGG - chr5_1:21728009-21728028 Msa0723760:intron 40.0%
GAAGATCTAAACGTGCTCAA+GGG - chr5_1:21728010-21728029 Msa0723760:CDS 40.0%
AGCCACAGGTAATGCTAAAA+GGG + chr5_1:21728169-21728188 None:intergenic 40.0%
AAGCCACAGGTAATGCTAAA+AGG + chr5_1:21728170-21728189 None:intergenic 40.0%
TTATCTTTGCAGCCACTATG+CGG - chr5_1:21728242-21728261 Msa0723760:intron 40.0%
AAATAGTGAGATCCGCATAG+TGG + chr5_1:21728257-21728276 None:intergenic 40.0%
! CTCACTATTTCTTGCTGTAC+AGG - chr5_1:21728267-21728286 Msa0723760:intron 40.0%
TTGCCTGTCAGTTTCTACAT+GGG + chr5_1:21728520-21728539 None:intergenic 40.0%
TTTGCCTGTCAGTTTCTACA+TGG + chr5_1:21728521-21728540 None:intergenic 40.0%
CTACAGCTTCTACAAATGCA+TGG + chr5_1:21728667-21728686 None:intergenic 40.0%
ACATGGAAATCAGAGGTAGA+CGG - chr5_1:21728756-21728775 Msa0723760:intron 40.0%
ATCGAATGCAAAAGAAAGGC+AGG - chr5_1:21728993-21729012 Msa0723760:intron 40.0%
TCGAATGCAAAAGAAAGGCA+GGG - chr5_1:21728994-21729013 Msa0723760:intron 40.0%
! AATGAGCACTGCGACATTAA+TGG - chr5_1:21729076-21729095 Msa0723760:CDS 40.0%
TTGGACTTTCCAACAATGTG+AGG - chr5_1:21729206-21729225 Msa0723760:CDS 40.0%
ATATCTAACCCGTAAGTCAC+TGG - chr5_1:21729289-21729308 Msa0723760:CDS 40.0%
GTTTCTTAACATGTGTCACC+AGG - chr5_1:21729491-21729510 Msa0723760:intron 40.0%
CACCTGTAGAACAAGAAATG+GGG + chr5_1:21729847-21729866 None:intergenic 40.0%
GACACCTGTAGAACAAGAAA+TGG + chr5_1:21729849-21729868 None:intergenic 40.0%
TGTTGGGGAAGATGAAGAAT+TGG - chr5_1:21729988-21730007 Msa0723760:intron 40.0%
! ACTTGATGACCTCACATTGT+GGG + chr5_1:21730113-21730132 None:intergenic 40.0%
AATGTGAGGTCATCAAGTGT+GGG - chr5_1:21730115-21730134 Msa0723760:CDS 40.0%
GCAAGTAATCAGTGACTTAC+GGG + chr5_1:21730195-21730214 None:intergenic 40.0%
GGCAAGTAATCAGTGACTTA+CGG + chr5_1:21730196-21730215 None:intergenic 40.0%
TATATTAGTGTGGCAATCGG+AGG - chr5_1:21730559-21730578 Msa0723760:CDS 40.0%
!! TCAAAGGAAAGGACTGGTTA+AGG - chr5_1:21730800-21730819 Msa0723760:intron 40.0%
!! CAAAGGAAAGGACTGGTTAA+GGG - chr5_1:21730801-21730820 Msa0723760:intron 40.0%
!! AAAGGAAAGGACTGGTTAAG+GGG - chr5_1:21730802-21730821 Msa0723760:intron 40.0%
TTGGACTTTCCAACATTGTG+AGG - chr5_1:21731009-21731028 Msa0723760:intron 40.0%
TCTCCTATCAGCTTCTACAT+GGG + chr5_1:21731051-21731070 None:intergenic 40.0%
TTCTCCTATCAGCTTCTACA+TGG + chr5_1:21731052-21731071 None:intergenic 40.0%
TGTAGAAGCTGATAGGAGAA+AGG - chr5_1:21731052-21731071 Msa0723760:intron 40.0%
AGAAAGGACTTGTCTGTAGA+GGG - chr5_1:21731068-21731087 Msa0723760:intron 40.0%
AACATGACAATCAGACGTAG+AGG - chr5_1:21731215-21731234 Msa0723760:CDS 40.0%
TCACCTCTGTGAAAGAATGT+GGG + chr5_1:21731691-21731710 None:intergenic 40.0%
ATCACCTCTGTGAAAGAATG+TGG + chr5_1:21731692-21731711 None:intergenic 40.0%
AACAGCTTGCATTGTTCTAC+AGG - chr5_1:21731891-21731910 Msa0723760:intron 40.0%
CTACAGGTATGAAGAATGAC+AGG - chr5_1:21731907-21731926 Msa0723760:intron 40.0%
! AGAGTATTCATCACTCTCTC+CGG + chr5_1:21732009-21732028 None:intergenic 40.0%
AAGACCCTGACTATGATGAT+GGG - chr5_1:21732051-21732070 Msa0723760:intron 40.0%
TGATGGGGAAGATAAAGAGA+TGG - chr5_1:21732067-21732086 Msa0723760:intron 40.0%
! CAATGTAATGGAGGCAATTC+CGG - chr5_1:21732161-21732180 Msa0723760:CDS 40.0%
! AGTTTCCAATAATGGGAGCA+TGG - chr5_1:21732184-21732203 Msa0723760:CDS 40.0%
CACTCAAAAGCAGTGAAGTT+GGG + chr5_1:21732262-21732281 None:intergenic 40.0%
! TTTTGGTCCAAGAGACTTAC+GGG + chr5_1:21732343-21732362 None:intergenic 40.0%
!! GTTTTGGTCCAAGAGACTTA+CGG + chr5_1:21732344-21732363 None:intergenic 40.0%
CATATCCATTTCCATCAGGA+AGG + chr5_1:21732988-21733007 None:intergenic 40.0%
!! TATACATGATGGTGTTGGTG+TGG + chr5_1:21733015-21733034 None:intergenic 40.0%
TTTGTCAATTGCCAACCTAG+TGG - chr5_1:21733116-21733135 Msa0723760:intron 40.0%
ATGGCATGATGCCAGTAATA+TGG + chr5_1:21733168-21733187 None:intergenic 40.0%
! TTCGAGTTTAAATCCCTTGC+AGG - chr5_1:21733215-21733234 Msa0723760:intron 40.0%
ATTTCACGGGTAACACTTTG+GGG + chr5_1:21733253-21733272 None:intergenic 40.0%
AGTGTGGAACAGAACATGTA+TGG - chr5_1:21733487-21733506 Msa0723760:intron 40.0%
TGTTGAGTTTACCTGTCGTA+AGG + chr5_1:21733552-21733571 None:intergenic 40.0%
CAAACTTAGCCGATACTAAG+GGG - chr5_1:21733570-21733589 Msa0723760:intron 40.0%
ACCAAACCATTCCATACTTC+TGG + chr5_1:21733617-21733636 None:intergenic 40.0%
!!! TTTTGTTTGGTGGACTGTAG+GGG + chr5_1:21733835-21733854 None:intergenic 40.0%
!!! CATTTTGTTTGGTGGACTGT+AGG + chr5_1:21733837-21733856 None:intergenic 40.0%
GCTCATGTTCATAAGAGGAA+AGG - chr5_1:21733929-21733948 Msa0723760:intron 40.0%
CATGTTCATAAGAGGAAAGG+TGG - chr5_1:21733932-21733951 Msa0723760:intron 40.0%
TGTTCATAAGAGGAAAGGTG+GGG - chr5_1:21733934-21733953 Msa0723760:intron 40.0%
AAGGTGGGGGATATATATCT+CGG - chr5_1:21733948-21733967 Msa0723760:intron 40.0%
!!! GACTTTTAAAGAGTGCCCTT+AGG - chr5_1:21734157-21734176 Msa0723760:intron 40.0%
TGAATCAAACTCTGGATGCA+TGG + chr5_1:21734330-21734349 None:intergenic 40.0%
CACACTTCTGAATCAAACTC+TGG + chr5_1:21734338-21734357 None:intergenic 40.0%
CAGAGTTTGATTCAGAAGTG+TGG - chr5_1:21734336-21734355 Msa0723760:intron 40.0%
TGTCGGGTATGAATAAGAAG+AGG - chr5_1:21734366-21734385 Msa0723760:intron 40.0%
GAAGCTCCTAGCTTAGTTAT+TGG - chr5_1:21734398-21734417 Msa0723760:intron 40.0%
TCTGCATGTGAAGTAGACAT+GGG + chr5_1:21734434-21734453 None:intergenic 40.0%
ATCTGCATGTGAAGTAGACA+TGG + chr5_1:21734435-21734454 None:intergenic 40.0%
TCTACTTCACATGCAGATAC+CGG - chr5_1:21734437-21734456 Msa0723760:intron 40.0%
GAACAAGCAACTGTTTATGC+GGG - chr5_1:21734742-21734761 Msa0723760:intron 40.0%
! GTTATTTCGGGTACAAGGCT+AGG - chr5_1:21726476-21726495 Msa0723760:three_prime_UTR 45.0%
AAATAGACGGAACTCGCAAG+TGG - chr5_1:21726753-21726772 Msa0723760:CDS 45.0%
AACCCTTGTGGTTAGGGTTT+AGG + chr5_1:21726815-21726834 None:intergenic 45.0%
! AACTACTACCCTTTTGTGCC+TGG - chr5_1:21726839-21726858 Msa0723760:CDS 45.0%
!! CACATCGGTGTTGAAGTTTG+TGG - chr5_1:21726970-21726989 Msa0723760:CDS 45.0%
! CGGTGTTGAAGTTTGTGGTT+CGG - chr5_1:21726975-21726994 Msa0723760:CDS 45.0%
!! AACATCGTATGCGGTGTTGT+AGG - chr5_1:21727004-21727023 Msa0723760:CDS 45.0%
GTGTTGAATGGTCTCTGAGT+TGG - chr5_1:21727279-21727298 Msa0723760:intron 45.0%
CCTCATTCCTCCAAAGAAGA+AGG + chr5_1:21727324-21727343 None:intergenic 45.0%
! CCTTCTTCTTTGGAGGAATG+AGG - chr5_1:21727321-21727340 Msa0723760:intron 45.0%
AGTAAGCGCAGTGGAATGAT+TGG - chr5_1:21727378-21727397 Msa0723760:intron 45.0%
CTGTTCATAGTTGTCCCTTG+AGG + chr5_1:21727528-21727547 None:intergenic 45.0%
! CAGGGGTCATTATTTTCGTG+CGG - chr5_1:21727597-21727616 Msa0723760:intron 45.0%
AGGACTATGGTATGGACCTT+AGG + chr5_1:21727628-21727647 None:intergenic 45.0%
GGTCCATACCATAGTCCTTA+TGG - chr5_1:21727630-21727649 Msa0723760:CDS 45.0%
! TCTAAGGCCCATAAGGACTA+TGG + chr5_1:21727641-21727660 None:intergenic 45.0%
CACGTTTAGATCTTCTGCCT+CGG + chr5_1:21728005-21728024 None:intergenic 45.0%
AAAGTCCTTACCTAGGGAAG+TGG + chr5_1:21728064-21728083 None:intergenic 45.0%
! CACCCTTTTAGCATTACCTG+TGG - chr5_1:21728164-21728183 Msa0723760:intron 45.0%
! TAATGCTTGTCTGAAGCCAC+AGG + chr5_1:21728183-21728202 None:intergenic 45.0%
AAATGTATTGAGGCTGGTGG+AGG - chr5_1:21728492-21728511 Msa0723760:intron 45.0%
GATCCCATGTAGAAACTGAC+AGG - chr5_1:21728514-21728533 Msa0723760:intron 45.0%
AGCAAGTGGCAAGTGACTTA+CGG + chr5_1:21728573-21728592 None:intergenic 45.0%
!! GAAGTATGTACTGGTTGTGG+CGG + chr5_1:21728848-21728867 None:intergenic 45.0%
GCCACAACCAGTACATACTT+CGG - chr5_1:21728847-21728866 Msa0723760:intron 45.0%
!! ACCGAAGTATGTACTGGTTG+TGG + chr5_1:21728851-21728870 None:intergenic 45.0%
GTGGAAACCGAAGTATGTAC+TGG + chr5_1:21728857-21728876 None:intergenic 45.0%
GTACATACTTCGGTTTCCAC+AGG - chr5_1:21728857-21728876 Msa0723760:intron 45.0%
CGAATGCAAAAGAAAGGCAG+GGG - chr5_1:21728995-21729014 Msa0723760:intron 45.0%
AAAAGAAAGGCAGGGGCAAA+GGG - chr5_1:21729002-21729021 Msa0723760:intron 45.0%
! GCTTGATGACCTCACATTGT+TGG + chr5_1:21729218-21729237 None:intergenic 45.0%
AATGTGAGGTCATCAAGCGT+AGG - chr5_1:21729220-21729239 Msa0723760:CDS 45.0%
ATCAGGTGACCAGTGACTTA+CGG + chr5_1:21729301-21729320 None:intergenic 45.0%
CGACAGAACTTGTCAGCATT+TGG + chr5_1:21729374-21729393 None:intergenic 45.0%
AATGCTGACAAGTTCTGTCG+CGG - chr5_1:21729374-21729393 Msa0723760:CDS 45.0%
!!! AGAGGTTTTGGAAGTAGACG+TGG - chr5_1:21729662-21729681 Msa0723760:CDS 45.0%
AGAGGTCGAAGTAATCTACC+AGG - chr5_1:21729692-21729711 Msa0723760:CDS 45.0%
GAGGTCGAAGTAATCTACCA+GGG - chr5_1:21729693-21729712 Msa0723760:CDS 45.0%
TTCACCACCAGCACATACTT+CGG - chr5_1:21729736-21729755 Msa0723760:intron 45.0%
CTCCCCATTTCTTGTTCTAC+AGG - chr5_1:21729842-21729861 Msa0723760:intron 45.0%
TCAAAAGAAAGGACGGGGTA+AGG - chr5_1:21729889-21729908 Msa0723760:intron 45.0%
TTGGACTTTCCCACAATGTG+AGG - chr5_1:21730101-21730120 Msa0723760:CDS 45.0%
! CACTTGATGACCTCACATTG+TGG + chr5_1:21730114-21730133 None:intergenic 45.0%
CAATGTGAGGTCATCAAGTG+TGG - chr5_1:21730114-21730133 Msa0723760:CDS 45.0%
ATGTCCTCAGGCACATGTTA+AGG + chr5_1:21730409-21730428 None:intergenic 45.0%
AGAGGAATTAGACGAGGTCA+AGG - chr5_1:21730583-21730602 Msa0723760:intron 45.0%
GAGGAATTAGACGAGGTCAA+GGG - chr5_1:21730584-21730603 Msa0723760:intron 45.0%
AGGAGGATCAATGCACGATT+GGG + chr5_1:21730638-21730657 None:intergenic 45.0%
AAGGATGCTGAAGTATGTGC+TGG + chr5_1:21730667-21730686 None:intergenic 45.0%
GCACATACTTCAGCATCCTT+AGG - chr5_1:21730667-21730686 Msa0723760:intron 45.0%
CAGTGTTCAAAGGAAAGGAC+TGG - chr5_1:21730794-21730813 Msa0723760:intron 45.0%
TGAAGAGATGCAGCTCATCA+TGG - chr5_1:21730908-21730927 Msa0723760:intron 45.0%
! ACTTGATGGCCTCACAATGT+TGG + chr5_1:21731021-21731040 None:intergenic 45.0%
AACATTGTGAGGCCATCAAG+TGG - chr5_1:21731020-21731039 Msa0723760:intron 45.0%
GATCCCATGTAGAAGCTGAT+AGG - chr5_1:21731045-21731064 Msa0723760:intron 45.0%
GAGAAAGGACTTGTCTGTAG+AGG - chr5_1:21731067-21731086 Msa0723760:intron 45.0%
AGACGTAGAGGAATTAAGCG+TGG - chr5_1:21731227-21731246 Msa0723760:CDS 45.0%
AAAGTATGTGCAGCTTCTGC+TGG + chr5_1:21731308-21731327 None:intergenic 45.0%
AGCAGAAGCTGCACATACTT+TGG - chr5_1:21731307-21731326 Msa0723760:CDS 45.0%
! GTGCTTGTTGCTTGCAGTAA+TGG - chr5_1:21731369-21731388 Msa0723760:CDS 45.0%
ATTCTGCCAGCTACCATAGT+CGG + chr5_1:21731662-21731681 None:intergenic 45.0%
CACCTCTGTGAAAGAATGTG+GGG + chr5_1:21731690-21731709 None:intergenic 45.0%
AGGTGATACTTCTGCCACAA+TGG - chr5_1:21731705-21731724 Msa0723760:intron 45.0%
GGTGATACTTCTGCCACAAT+GGG - chr5_1:21731706-21731725 Msa0723760:intron 45.0%
CTTAACTCACTCACCCATTG+TGG + chr5_1:21731722-21731741 None:intergenic 45.0%
TGGCATAATCTACAGGCACT+TGG - chr5_1:21731856-21731875 Msa0723760:intron 45.0%
TGACAGGAACAAGATGCCAA+AGG - chr5_1:21731923-21731942 Msa0723760:intron 45.0%
AGGAACAAGATGCCAAAGGA+AGG - chr5_1:21731927-21731946 Msa0723760:intron 45.0%
!! CCAAAGGAAGGACTGGTTAA+GGG - chr5_1:21731939-21731958 Msa0723760:intron 45.0%
!! CAAAGGAAGGACTGGTTAAG+GGG - chr5_1:21731940-21731959 Msa0723760:intron 45.0%
GAAGACCCTGACTATGATGA+TGG - chr5_1:21732050-21732069 Msa0723760:intron 45.0%
! AGACCCTGACTATGATGATG+GGG - chr5_1:21732052-21732071 Msa0723760:intron 45.0%
CTTCCCCATCATCATAGTCA+GGG + chr5_1:21732058-21732077 None:intergenic 45.0%
TCTTCCCCATCATCATAGTC+AGG + chr5_1:21732059-21732078 None:intergenic 45.0%
GCTCCCATTATTGGAAACTC+CGG + chr5_1:21732183-21732202 None:intergenic 45.0%
ACTGTCCATGCTCCCATTAT+TGG + chr5_1:21732192-21732211 None:intergenic 45.0%
CCACTCAAAAGCAGTGAAGT+TGG + chr5_1:21732263-21732282 None:intergenic 45.0%
!! CCAACTTCACTGCTTTTGAG+TGG - chr5_1:21732260-21732279 Msa0723760:CDS 45.0%
!! CTGCTTTTGAGTGGAAGATC+TGG - chr5_1:21732269-21732288 Msa0723760:CDS 45.0%
TTGAGTGGAAGATCTGGTGT+AGG - chr5_1:21732275-21732294 Msa0723760:CDS 45.0%
! CTGAAGAGATCTGACTTGAG+AGG - chr5_1:21732537-21732556 Msa0723760:CDS 45.0%
TCAATTGCCAACCTAGTGGA+TGG - chr5_1:21733120-21733139 Msa0723760:intron 45.0%
GAGTTTAAATCCCTTGCAGG+AGG - chr5_1:21733218-21733237 Msa0723760:intron 45.0%
TTTAAATCCCTTGCAGGAGG+AGG - chr5_1:21733221-21733240 Msa0723760:intron 45.0%
TAATCTTTCCACTTCGCAGC+TGG + chr5_1:21733307-21733326 None:intergenic 45.0%
TAGAAAAACGGCCTTACGAC+AGG - chr5_1:21733538-21733557 Msa0723760:intron 45.0%
!! ACTTCTGGCTTCAGTCCTTT+GGG + chr5_1:21733602-21733621 None:intergenic 45.0%
!! TACTTCTGGCTTCAGTCCTT+TGG + chr5_1:21733603-21733622 None:intergenic 45.0%
AAGGACTGAAGCCAGAAGTA+TGG - chr5_1:21733603-21733622 Msa0723760:intron 45.0%
! CTGAAGCCAGAAGTATGGAA+TGG - chr5_1:21733608-21733627 Msa0723760:intron 45.0%
! GCCAGAAGTATGGAATGGTT+TGG - chr5_1:21733613-21733632 Msa0723760:intron 45.0%
!! GGAATGGTTTGGTTGACATC+TGG - chr5_1:21733624-21733643 Msa0723760:intron 45.0%
ACATCTGGTTGAAACCAGAG+TGG - chr5_1:21733639-21733658 Msa0723760:intron 45.0%
ACCAGAGTGGATGAAGAAGT+CGG - chr5_1:21733652-21733671 Msa0723760:intron 45.0%
! TCTAAAGCTTATCGAGCCTC+CGG + chr5_1:21733726-21733745 None:intergenic 45.0%
GTTCATAAGAGGAAAGGTGG+GGG - chr5_1:21733935-21733954 Msa0723760:intron 45.0%
AATGCTAACAAGCGCCCTAA+GGG + chr5_1:21734175-21734194 None:intergenic 45.0%
AAATGCTAACAAGCGCCCTA+AGG + chr5_1:21734176-21734195 None:intergenic 45.0%
CAGCCCATCCTTTCTATGAT+TGG - chr5_1:21734560-21734579 Msa0723760:intron 45.0%
!! ACAAATATAAATAAAATTAA+GGG + chr5_1:21734199-21734218 None:intergenic 5.0%
TGAACGCACCAGGCACAAAA+GGG + chr5_1:21726850-21726869 None:intergenic 50.0%
ATGAACGCACCAGGCACAAA+AGG + chr5_1:21726851-21726870 None:intergenic 50.0%
CCAAAGAAGAAGGCTACAGC+TGG + chr5_1:21727314-21727333 None:intergenic 50.0%
CCAGCTGTAGCCTTCTTCTT+TGG - chr5_1:21727311-21727330 Msa0723760:intron 50.0%
GCTGTAGCCTTCTTCTTTGG+AGG - chr5_1:21727314-21727333 Msa0723760:intron 50.0%
!! GCGCTTACTGATTTGACCGT+CGG + chr5_1:21727367-21727386 None:intergenic 50.0%
GGTCAAATCAGTAAGCGCAG+TGG - chr5_1:21727369-21727388 Msa0723760:intron 50.0%
TTGTCCCTTGAACCTTGACC+TGG - chr5_1:21727473-21727492 Msa0723760:intron 50.0%
CTGTCCAGGTCAAGGTTCAA+GGG + chr5_1:21727480-21727499 None:intergenic 50.0%
AGACAATGAGAGGATGGCCT+TGG - chr5_1:21727546-21727565 Msa0723760:intron 50.0%
AAGGGTCTAGGTCTCTTCCA+GGG - chr5_1:21727579-21727598 Msa0723760:intron 50.0%
CGCACGAAAATAATGACCCC+TGG + chr5_1:21727599-21727618 None:intergenic 50.0%
CTATGGTATGGACCTTAGGC+AGG + chr5_1:21727624-21727643 None:intergenic 50.0%
GGCCCATAAGGACTATGGTA+TGG + chr5_1:21727636-21727655 None:intergenic 50.0%
!! ACATATGTTGGGTTGGGCCT+CGG - chr5_1:21727661-21727680 Msa0723760:CDS 50.0%
TGTGGGTTCTTGTTCCTGTC+TGG + chr5_1:21727688-21727707 None:intergenic 50.0%
TCTAAACGTGCTCAAGGGAG+AGG - chr5_1:21728015-21728034 Msa0723760:CDS 50.0%
ACCTTCCACTTCCCTAGGTA+AGG - chr5_1:21728056-21728075 Msa0723760:CDS 50.0%
TCCTTACCTAGGGAAGTGGA+AGG + chr5_1:21728060-21728079 None:intergenic 50.0%
GCAAGTGGCAAGTGACTTAC+GGG + chr5_1:21728572-21728591 None:intergenic 50.0%
!! AGAGGTAGACGGATTACTCG+TGG - chr5_1:21728767-21728786 Msa0723760:intron 50.0%
!! AGACGGATTACTCGTGGTCA+AGG - chr5_1:21728773-21728792 Msa0723760:intron 50.0%
!! GACGGATTACTCGTGGTCAA+GGG - chr5_1:21728774-21728793 Msa0723760:intron 50.0%
ATTACTCGTGGTCAAGGGAG+AGG - chr5_1:21728779-21728798 Msa0723760:intron 50.0%
AGAGGTCACAGTGATCTACC+AGG - chr5_1:21728797-21728816 Msa0723760:intron 50.0%
GAGGTCACAGTGATCTACCA+GGG - chr5_1:21728798-21728817 Msa0723760:intron 50.0%
GGATCAATGCACGGTTGAGA+AGG + chr5_1:21728824-21728843 None:intergenic 50.0%
CAAAAGAAAGGCAGGGGCAA+AGG - chr5_1:21729001-21729020 Msa0723760:intron 50.0%
TCAGGTGACCAGTGACTTAC+GGG + chr5_1:21729300-21729319 None:intergenic 50.0%
TTTGGAAGTAGACGTGGTCG+AGG - chr5_1:21729668-21729687 Msa0723760:CDS 50.0%
TTGGAAGTAGACGTGGTCGA+GGG - chr5_1:21729669-21729688 Msa0723760:CDS 50.0%
ATGTACGATTGAGAAGGCCC+TGG + chr5_1:21729713-21729732 None:intergenic 50.0%
GTAACCGAAGTATGTGCTGG+TGG + chr5_1:21729743-21729762 None:intergenic 50.0%
GGTTCCTTAACATGTGCCTG+AGG - chr5_1:21730402-21730421 Msa0723760:CDS 50.0%
GGAGGTAGAGGAATTAGACG+AGG - chr5_1:21730577-21730596 Msa0723760:CDS 50.0%
ATTAGACGAGGTCAAGGGAG+AGG - chr5_1:21730589-21730608 Msa0723760:intron 50.0%
GAGGTTGTAGTGATCCACCA+AGG - chr5_1:21730608-21730627 Msa0723760:intron 50.0%
GGATCAATGCACGATTGGGA+AGG + chr5_1:21730634-21730653 None:intergenic 50.0%
GAGGAGGATCAATGCACGAT+TGG + chr5_1:21730639-21730658 None:intergenic 50.0%
GATGCTGAAGTATGTGCTGG+TGG + chr5_1:21730664-21730683 None:intergenic 50.0%
ATTGTGAGGCCATCAAGTGG+AGG - chr5_1:21731023-21731042 Msa0723760:intron 50.0%
ACATGGGATCCTCCACTTGA+TGG + chr5_1:21731035-21731054 None:intergenic 50.0%
AGAGGAATTAAGCGTGGTCG+CGG - chr5_1:21731233-21731252 Msa0723760:CDS 50.0%
ATGCATGATTGAGAAGGCCC+TGG + chr5_1:21731278-21731297 None:intergenic 50.0%
! GCACATACTTTGGTTTCCCC+AGG - chr5_1:21731317-21731336 Msa0723760:CDS 50.0%
CTGCAGCACCTTGAAGTTTC+AGG + chr5_1:21731639-21731658 None:intergenic 50.0%
CACCCCACATTCTTTCACAG+AGG - chr5_1:21731685-21731704 Msa0723760:CDS 50.0%
CAAGATGCCAAAGGAAGGAC+TGG - chr5_1:21731932-21731951 Msa0723760:intron 50.0%
!! GCCAAAGGAAGGACTGGTTA+AGG - chr5_1:21731938-21731957 Msa0723760:intron 50.0%
CCCTTAACCAGTCCTTCCTT+TGG + chr5_1:21731942-21731961 None:intergenic 50.0%
GCTCTAACCCGTAAGTCTCT+TGG - chr5_1:21732333-21732352 Msa0723760:CDS 50.0%
TACCTCTTTCACATGCCCGT+TGG - chr5_1:21732882-21732901 Msa0723760:CDS 50.0%
TTCCAACGGGCATGTGAAAG+AGG + chr5_1:21732887-21732906 None:intergenic 50.0%
AATCAGCACTCCCTTCCTGA+TGG - chr5_1:21732974-21732993 Msa0723760:CDS 50.0%
CACTCCCTTCCTGATGGAAA+TGG - chr5_1:21732980-21732999 Msa0723760:CDS 50.0%
AGTTGTGCCATCCACTAGGT+TGG + chr5_1:21733130-21733149 None:intergenic 50.0%
TTGGAGTTGTGCCATCCACT+AGG + chr5_1:21733134-21733153 None:intergenic 50.0%
GAACAAACCTCCTCCTGCAA+GGG + chr5_1:21733231-21733250 None:intergenic 50.0%
TTAGCCGATACTAAGGGGCA+TGG - chr5_1:21733575-21733594 Msa0723760:intron 50.0%
! TAGCCGATACTAAGGGGCAT+GGG - chr5_1:21733576-21733595 Msa0723760:intron 50.0%
TCCGACTTCTTCATCCACTC+TGG + chr5_1:21733656-21733675 None:intergenic 50.0%
CAACGCTGAATCAGGTTTGG+CGG + chr5_1:21733699-21733718 None:intergenic 50.0%
GTGCAACGCTGAATCAGGTT+TGG + chr5_1:21733702-21733721 None:intergenic 50.0%
! TGATTCAGAAGTGTGGGCAG+AGG - chr5_1:21734343-21734362 Msa0723760:intron 50.0%
ACTTCACATGCAGATACCGG+TGG - chr5_1:21734440-21734459 Msa0723760:intron 50.0%
!! GAAAGGATGGGCTGCAACAT+AGG + chr5_1:21734554-21734573 None:intergenic 50.0%
TTTCGACAGTGCTTGTCGCA+TGG + chr5_1:21734591-21734610 None:intergenic 50.0%
! ATGCGACAAGCACTGTCGAA+AGG - chr5_1:21734590-21734609 Msa0723760:intron 50.0%
CAACTGTTTATGCGGGCATG+TGG - chr5_1:21734749-21734768 Msa0723760:intron 50.0%
AGACGGAACTCGCAAGTGGA+CGG - chr5_1:21726757-21726776 Msa0723760:CDS 55.0%
TTGTGCCTGGTGCGTTCATC+CGG - chr5_1:21726852-21726871 Msa0723760:CDS 55.0%
TGTACCTGCACACAGTCCGA+CGG - chr5_1:21727348-21727367 Msa0723760:intron 55.0%
CCTGTCCAGGTCAAGGTTCA+AGG + chr5_1:21727481-21727500 None:intergenic 55.0%
CCTTGAACCTTGACCTGGAC+AGG - chr5_1:21727478-21727497 Msa0723760:intron 55.0%
CAGAACACCTGTCCAGGTCA+AGG + chr5_1:21727488-21727507 None:intergenic 55.0%
ACCTGGACAGGTGTTCTGTG+AGG - chr5_1:21727490-21727509 Msa0723760:intron 55.0%
CCTGGACAGGTGTTCTGTGA+GGG - chr5_1:21727491-21727510 Msa0723760:intron 55.0%
! TGAGAGGATGGCCTTGGATC+CGG - chr5_1:21727552-21727571 Msa0723760:intron 55.0%
GAAGGGTCTAGGTCTCTTCC+AGG - chr5_1:21727578-21727597 Msa0723760:intron 55.0%
AGGGTCTAGGTCTCTTCCAG+GGG - chr5_1:21727580-21727599 Msa0723760:intron 55.0%
! TTTTCGTGCGGTCCTGCCTA+AGG - chr5_1:21727609-21727628 Msa0723760:intron 55.0%
TCTTGTTCCTGTCTGGACCG+AGG + chr5_1:21727681-21727700 None:intergenic 55.0%
CCTAGGGAAGTGGAAGGTTG+TGG + chr5_1:21728054-21728073 None:intergenic 55.0%
CCACAACCTTCCACTTCCCT+AGG - chr5_1:21728051-21728070 Msa0723760:CDS 55.0%
TGTGGCGGTGGATCAATGCA+CGG + chr5_1:21728833-21728852 None:intergenic 55.0%
!! GTATGTACTGGTTGTGGCGG+TGG + chr5_1:21728845-21728864 None:intergenic 55.0%
GGGGTAACCGAAGTATGTGC+TGG + chr5_1:21729746-21729765 None:intergenic 55.0%
GCACATACTTCGGTTACCCC+AGG - chr5_1:21729746-21729765 Msa0723760:intron 55.0%
AGTGTGGCAATCGGAGGTAG+AGG - chr5_1:21730565-21730584 Msa0723760:CDS 55.0%
ATGCACGATTGGGAAGGCCT+TGG + chr5_1:21730628-21730647 None:intergenic 55.0%
!! GAAGTATGTGCTGGTGGTGG+AGG + chr5_1:21730658-21730677 None:intergenic 55.0%
! GCTGAAGTATGTGCTGGTGG+TGG + chr5_1:21730661-21730680 None:intergenic 55.0%
ATTAAGCGTGGTCGCGGAAG+AGG - chr5_1:21731239-21731258 Msa0723760:CDS 55.0%
AGAGGTCGTAGTGATCCACC+AGG - chr5_1:21731257-21731276 Msa0723760:CDS 55.0%
GAGGTCGTAGTGATCCACCA+GGG - chr5_1:21731258-21731277 Msa0723760:CDS 55.0%
CATGATTGAGAAGGCCCTGG+TGG + chr5_1:21731275-21731294 None:intergenic 55.0%
! CTGGTGGATGAGTTGGGTGT+GGG + chr5_1:21732232-21732251 None:intergenic 55.0%
! CGTTGCCTGGTGGATGAGTT+GGG + chr5_1:21732238-21732257 None:intergenic 55.0%
! TCGTTGCCTGGTGGATGAGT+TGG + chr5_1:21732239-21732258 None:intergenic 55.0%
AGTGAAGTTGGGTCGTTGCC+TGG + chr5_1:21732251-21732270 None:intergenic 55.0%
GGAACAAACCTCCTCCTGCA+AGG + chr5_1:21733232-21733251 None:intergenic 55.0%
TTCCACTTCGCAGCTGGAGT+AGG + chr5_1:21733301-21733320 None:intergenic 55.0%
CCTGATTCAGCGTTGCACAC+CGG - chr5_1:21733704-21733723 Msa0723760:intron 55.0%
! AGAAGTGTGGGCAGAGGTGT+CGG - chr5_1:21734349-21734368 Msa0723760:intron 55.0%
GTTGGAGCTACAGTGCGTGA+GGG + chr5_1:21734467-21734486 None:intergenic 55.0%
AGTTGGAGCTACAGTGCGTG+AGG + chr5_1:21734468-21734487 None:intergenic 55.0%
GGAACTCGCAAGTGGACGGT+GGG - chr5_1:21726761-21726780 Msa0723760:CDS 60.0%
TGCATCCGGATGAACGCACC+AGG + chr5_1:21726860-21726879 None:intergenic 60.0%
TTGACCGTCGGACTGTGTGC+AGG + chr5_1:21727355-21727374 None:intergenic 60.0%
CCCTCACAGAACACCTGTCC+AGG + chr5_1:21727494-21727513 None:intergenic 60.0%
! AGGATGGCCTTGGATCCGGA+CGG - chr5_1:21727556-21727575 Msa0723760:intron 60.0%
GAGACCTAGACCCTTCCGTC+CGG + chr5_1:21727574-21727593 None:intergenic 60.0%
ATGCACGGTTGAGAAGGCCC+TGG + chr5_1:21728818-21728837 None:intergenic 60.0%
GGTCTTGCTAACAAGGGCCC+TGG + chr5_1:21729512-21729531 None:intergenic 60.0%
AGTAGACGTGGTCGAGGGAG+AGG - chr5_1:21729674-21729693 Msa0723760:CDS 60.0%
CACGATTGGGAAGGCCTTGG+TGG + chr5_1:21730625-21730644 None:intergenic 60.0%
!! GTATGTGCTGGTGGTGGAGG+AGG + chr5_1:21730655-21730674 None:intergenic 60.0%
!! CAAGGTGCTGCAGCCGACTA+TGG - chr5_1:21731646-21731665 Msa0723760:CDS 60.0%
CTGCAGCCGACTATGGTAGC+TGG - chr5_1:21731653-21731672 Msa0723760:CDS 60.0%
TCAAGGTGCGGTGAGCTGTG+AGG - chr5_1:21731785-21731804 Msa0723760:intron 60.0%
! CCTGGTGGATGAGTTGGGTG+TGG + chr5_1:21732233-21732252 None:intergenic 60.0%
CCACACCCAACTCATCCACC+AGG - chr5_1:21732230-21732249 Msa0723760:CDS 60.0%
GAAGTTGGGTCGTTGCCTGG+TGG + chr5_1:21732248-21732267 None:intergenic 60.0%
TGCCTACTCCAGCTGCGAAG+TGG - chr5_1:21733296-21733315 Msa0723760:intron 60.0%
GGGCCCATGCCCCTTAGTAT+CGG + chr5_1:21733582-21733601 None:intergenic 60.0%
! ACTAAGGGGCATGGGCCCAA+AGG - chr5_1:21733584-21733603 Msa0723760:intron 60.0%
CCGGTGTGCAACGCTGAATC+AGG + chr5_1:21733707-21733726 None:intergenic 60.0%
GATTCAGCGTTGCACACCGG+AGG - chr5_1:21733707-21733726 Msa0723760:intron 60.0%
!! GAAGTGTGGGCAGAGGTGTC+GGG - chr5_1:21734350-21734369 Msa0723760:intron 60.0%
TACAGTGCGTGAGGGACCAC+CGG + chr5_1:21734459-21734478 None:intergenic 60.0%
CGGAACTCGCAAGTGGACGG+TGG - chr5_1:21726760-21726779 Msa0723760:CDS 65.0%
AGGGACAGCTGCAGCCCTCA+AGG - chr5_1:21727510-21727529 Msa0723760:intron 65.0%
GGGACAGCTGCAGCCCTCAA+GGG - chr5_1:21727511-21727530 Msa0723760:intron 65.0%
! TGGCCTTGGATCCGGACGGA+AGG - chr5_1:21727560-21727579 Msa0723760:intron 65.0%
GGCCTTGGATCCGGACGGAA+GGG - chr5_1:21727561-21727580 Msa0723760:intron 65.0%
GACCCTTCCGTCCGGATCCA+AGG + chr5_1:21727566-21727585 None:intergenic 65.0%
GGATCCGGACGGAAGGGTCT+AGG - chr5_1:21727567-21727586 Msa0723760:intron 65.0%
GTGCGGTGAGCTGTGAGGCT+TGG - chr5_1:21731790-21731809 Msa0723760:intron 65.0%
GGTTGGGCCTCGGTCCAGAC+AGG - chr5_1:21727671-21727690 Msa0723760:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 21726437 21734939 21726437 ID=Msa0723760;Name=Msa0723760
chr5_1 mRNA 21726437 21734939 21726437 ID=Msa0723760-mRNA-1;Parent=Msa0723760;Name=Msa0723760-mRNA-1;_AED=0.00;_eAED=0.00;_QI=213|1|1|1|0.93|0.87|16|278|1078
chr5_1 exon 21726437 21727095 21726437 ID=Msa0723760-mRNA-1:exon:8237;Parent=Msa0723760-mRNA-1
chr5_1 exon 21727388 21727489 21727388 ID=Msa0723760-mRNA-1:exon:8236;Parent=Msa0723760-mRNA-1
chr5_1 exon 21727613 21727936 21727613 ID=Msa0723760-mRNA-1:exon:8235;Parent=Msa0723760-mRNA-1
chr5_1 exon 21728010 21728139 21728010 ID=Msa0723760-mRNA-1:exon:8234;Parent=Msa0723760-mRNA-1
chr5_1 exon 21729034 21729463 21729034 ID=Msa0723760-mRNA-1:exon:8233;Parent=Msa0723760-mRNA-1
chr5_1 exon 21729649 21729726 21729649 ID=Msa0723760-mRNA-1:exon:8232;Parent=Msa0723760-mRNA-1
chr5_1 exon 21730038 21730147 21730038 ID=Msa0723760-mRNA-1:exon:8231;Parent=Msa0723760-mRNA-1
chr5_1 exon 21730274 21730601 21730274 ID=Msa0723760-mRNA-1:exon:8230;Parent=Msa0723760-mRNA-1
chr5_1 exon 21730688 21730809 21730688 ID=Msa0723760-mRNA-1:exon:8229;Parent=Msa0723760-mRNA-1
chr5_1 exon 21731182 21731512 21731182 ID=Msa0723760-mRNA-1:exon:8228;Parent=Msa0723760-mRNA-1
chr5_1 exon 21731609 21731712 21731609 ID=Msa0723760-mRNA-1:exon:8227;Parent=Msa0723760-mRNA-1
chr5_1 exon 21732077 21732401 21732077 ID=Msa0723760-mRNA-1:exon:8226;Parent=Msa0723760-mRNA-1
chr5_1 exon 21732498 21732607 21732498 ID=Msa0723760-mRNA-1:exon:8225;Parent=Msa0723760-mRNA-1
chr5_1 exon 21732805 21733087 21732805 ID=Msa0723760-mRNA-1:exon:8224;Parent=Msa0723760-mRNA-1
chr5_1 exon 21733304 21733419 21733304 ID=Msa0723760-mRNA-1:exon:8223;Parent=Msa0723760-mRNA-1
chr5_1 exon 21734764 21734939 21734764 ID=Msa0723760-mRNA-1:exon:8222;Parent=Msa0723760-mRNA-1
chr5_1 five_prime_UTR 21734764 21734939 21734764 ID=Msa0723760-mRNA-1:five_prime_utr;Parent=Msa0723760-mRNA-1
chr5_1 five_prime_UTR 21733383 21733419 21733383 ID=Msa0723760-mRNA-1:five_prime_utr;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21733304 21733382 21733304 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21732805 21733087 21732805 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21732498 21732607 21732498 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21732077 21732401 21732077 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21731609 21731712 21731609 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21731182 21731512 21731182 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21730688 21730809 21730688 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21730274 21730601 21730274 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21730038 21730147 21730038 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21729649 21729726 21729649 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21729034 21729463 21729034 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21728010 21728139 21728010 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21727613 21727936 21727613 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21727388 21727489 21727388 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 CDS 21726715 21727095 21726715 ID=Msa0723760-mRNA-1:cds;Parent=Msa0723760-mRNA-1
chr5_1 three_prime_UTR 21726437 21726714 21726437 ID=Msa0723760-mRNA-1:three_prime_utr;Parent=Msa0723760-mRNA-1
Gene Sequence

>Msa0723760

ATGGTAGTCCGAGGCAGAAGATCTAAACGTGCTCAAGGGAGAGGTCGCAGTGATCTACCACAACCTTCCACTTCCCTAGGCGTCAAGACTGACAAGAACAGAATTCAAAAGAAAGGACCAGTAAAGGGTTTTGATGCATTAAACAATAAGCAAAAATTTGCTCCTTTCAATTCTGAACAGAATGATGAAGACAACAACTACAATGATGGTGAAGATGAAGAGATGCAATTCGTCAATATTTATAAACAACAACTACAGGCGACTGTTGCGAATAACTCAAAAAAATGTATTGAGGCTGGTGGAGGATCCCATGTAGAAACTGACAGGCAAAAAGTTATATCTTTAGAGGGCACTTCTAACCCAGGTAGACGGATTACTCGTGGTCAAGGGAGAGGTCACAGTGATCTACCAGGGCCTTCTCAACCGTGCATTGATCCACCGCCACAACCAGTACATACTTCGGTTTCCACAGGCGTCAAGAATGACAAGAATCGAATGCAAAAGAAAGGCAGGGGCAAAGGGCTTGATCCATTAAATAAGAAGCAGAAATCTACTGCTCTTAATTCTGAACAGAATGAGCACTGCGACATTAATGGCGAAGATGAAGAATTGCAACTTATCATTGACAAAATTTGTCAATCAAAATTACACAAGCAGCAAGCAACTGATGCAAATAATGTGGAACAGTTAATTGGATCTAATTTTGGACTTTCCAACAATGTGAGGTCATCAAGCGTAGGATATCATGTAGAAGCTGATACGAGAAAAGTTACATCTGTAGAGGGCATATCTAACCCAGGTTTTGGAAGTAGACGTGGTCGAGGGAGAGGTCGAAGTAATCTACCAGGGCCTTCTCAATCGTACATTGATTCACCACCAGCACATACTTCGGTTACCCCAGGTGTCAAAAATGGCAAGAATAGAATTCAAAAGAAAGGACGGGGTAAGGAAATTGATACATTAAATAGTAAGCAGAAATCTGCTGCTTTTAATTCTGAACAAAATGACGAACACTACACCAATAATGTTGGGGAAGATGAAGAATTGGAACACATCTCAGAGAAAACTATTCAAGCACAATTACACAAGCAGCAAGCAACAAATGCAAATAATGTGGAAAACTATAATGGATCCAATTTTGGACTTTCCCACAATGTGAGGTCATCAAGTGTGGGATATCATGTAGAAGCTGACACAAGAAAAGTTATATCTGTTGAGGGCATCTCTAACCCTGTGGCAATCGGAGGTAGAGGAATTAGACGAGGTCAAGGGAGAGGTTGTAGTGATCCACCAAGGCCTTCCCAATCGTGCATTGATCCTCCTCCACCACCAGCACATACTTCAGCATCCTTAGGTGTTCAGAATAACAATGACAGTGTTCAAAGGAAAGGACTGGTTAAGGGGTTTGATGCATTAAATAATAAGCAGAAAGCTACTGCTTTTAATTCTGAAAATGATGAATACTACGGTTTTAGTGATGGTAAAGATGAAGAGATGCAGCTCATCATGGAGAAAATTTATGAACGACAATTACTCAAGCAGCAAGCAGCTATTGCAAATAACGTGACAAAATGTATTGGAGACAGATTTGGACTTTCCAACATTGTGAGGCCATCAAGTGGAGGATCCCATGTAGAAGCTGATAGGAGAAAGGACTTGTCTGTAGAGGGCATCTCTAACCCACGTAGAGGAATTAAGCGTGGTCGCGGAAGAGGTCGTAGTGATCCACCAGGGCCTTCTCAATCATGCATTGATTCACCAGCAGAAGCTGCACATACTTTGGTTTCCCCAGGTGCTGCAGCCGACTATGGTAGCTGGCAGAATGCTCACCCCACATTCTTTCACAGAGGTGATACTTCTGCCACAATGGGTATGAAGAATGACAGGAACAAGATGCCAAAGGAAGGACTGGTTAAGGGGCATACTGCATTAAACAATAAGCAGAAATTTACTGCTGTTAGTTCCGGAGAGAGTGATGAATACTCTGACTACGATGATGCAGAAGATGAAGACCCTGACTATGATGATGGGGAAGATAAAGAGATGGAACTCATTCGGGAGAAAAGTTTTGAACAACAATCACTCAGACAACAAGTAGCTGACACAAATAATGTGAAACAATGTAATGGAGGCAATTCCGGAGTTTCCAATAATGGGAGCATGGACAGTGCATCTTCAGATTCTGACCCACACCCAACTCATCCACCAGGCAACGACCCAACTTCACTGCTTTTGAGTGGAAGATCTGGTGTAGGTATTGATAGAAGAAAAGTTATATCTATCGAGGACAGCTCTAACCCGAGGAGGTTTGTTCCCCAAAGTGTTACCCGTGAAATTATATCTACTGTGATTGCACGGATGCCTACTCCAGCTGCGAAGTGGAAAGATTATCCAATTGAAATGAAGGATGAGTTATTTAAGGAATTCATGGGTAAATACAATTTTGCATCGGATTCTGAACGCAATATTGCAAGAATAGTGTGGAACAGAACATGTATGGACCGCTATCCTGATCATTTAAAAAATGCTAGAAAAACGGCCTTACGACAGGTAAACTCAACAAACTTAGCCGATACTAAGGGGCATGGGCCCAAAGGACTGAAGCCAGAAGTATGGAATGGTTTGGTTGACATCTGGTTGAAACCAGAGTGGATGAAGAAGTCGGATGCTAATCGATGCAATAGAGCCGCCAAACCTGATTCAGCGTTGCACACCGGAGGCTCGATAAGCTTTAGAGAACATAAGAAGAGGATGGAGGAAGAGATGAAGCAAGAAGTTTCCTATAGAGATGTTTACGCTCATGTTCATAAGAGGAAAGGTGGGGGATATATATCTCGGCGCTCAAAGAAATTGATCGATTTATATGACACTATGAAGTTGGAAAAGTACGGAGAAGATTTTTCCATGCATCCAGAGTTTGATTCAGAAGTGTGGGCAGAGGTGTCGGGTATGAATAAGAAGAGGAGAGCTTATGAAGCTCCTAGCTTAGTTATTGGCAATTCTAGACCCATGTCTACTTCACATGCAGATACCGGTGGTCCCTCACGCACTGTAGCTCCAACTGAAGAATATATTAAGGAAGCTGTAAATACAGCGATGACTTCTTTTGTGCAAACGCAATTAGCACCTATGTTGCAGCCCATCCTTTCTATGATTGGTAACTCCATGCGACAAGCACTGTCGAAAGGTAGAGTAATTGAGAAAGATAGTGATGATGATGATGATGATGATGAATGA
Protein sequence

>Msa0723760

MVVRGRRSKRAQGRGRSDLPQPSTSLGVKTDKNRIQKKGPVKGFDALNNKQKFAPFNSEQNDEDNNYNDGEDEEMQFVNIYKQQLQATVANNSKKCIEAGGGSHVETDRQKVISLEGTSNPGRRITRGQGRGHSDLPGPSQPCIDPPPQPVHTSVSTGVKNDKNRMQKKGRGKGLDPLNKKQKSTALNSEQNEHCDINGEDEELQLIIDKICQSKLHKQQATDANNVEQLIGSNFGLSNNVRSSSVGYHVEADTRKVTSVEGISNPGFGSRRGRGRGRSNLPGPSQSYIDSPPAHTSVTPGVKNGKNRIQKKGRGKEIDTLNSKQKSAAFNSEQNDEHYTNNVGEDEELEHISEKTIQAQLHKQQATNANNVENYNGSNFGLSHNVRSSSVGYHVEADTRKVISVEGISNPVAIGGRGIRRGQGRGCSDPPRPSQSCIDPPPPPAHTSASLGVQNNNDSVQRKGLVKGFDALNNKQKATAFNSENDEYYGFSDGKDEEMQLIMEKIYERQLLKQQAAIANNVTKCIGDRFGLSNIVRPSSGGSHVEADRRKDLSVEGISNPRRGIKRGRGRGRSDPPGPSQSCIDSPAEAAHTLVSPGAAADYGSWQNAHPTFFHRGDTSATMGMKNDRNKMPKEGLVKGHTALNNKQKFTAVSSGESDEYSDYDDAEDEDPDYDDGEDKEMELIREKSFEQQSLRQQVADTNNVKQCNGGNSGVSNNGSMDSASSDSDPHPTHPPGNDPTSLLLSGRSGVGIDRRKVISIEDSSNPRRFVPQSVTREIISTVIARMPTPAAKWKDYPIEMKDELFKEFMGKYNFASDSERNIARIVWNRTCMDRYPDHLKNARKTALRQVNSTNLADTKGHGPKGLKPEVWNGLVDIWLKPEWMKKSDANRCNRAAKPDSALHTGGSISFREHKKRMEEEMKQEVSYRDVYAHVHKRKGGGYISRRSKKLIDLYDTMKLEKYGEDFSMHPEFDSEVWAEVSGMNKKRRAYEAPSLVIGNSRPMSTSHADTGGPSRTVAPTEEYIKEAVNTAMTSFVQTQLAPMLQPILSMIGNSMRQALSKGRVIEKDSDDDDDDDE*