AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0953120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953120 MtrunA17_Chr8g0386831 68.030 538 83 6 26 506 70 575 0.0 703
Msa0953120 MtrunA17_Chr5g0397411 52.252 555 176 9 18 506 59 590 0.0 530
Msa0953120 MtrunA17_Chr8g0386841 56.538 520 145 5 26 487 48 544 0.0 521
Msa0953120 MtrunA17_Chr6g0474401 50.962 312 94 5 62 373 11 263 7.94e-89 273
Msa0953120 MtrunA17_Chr6g0451341 39.394 99 57 2 121 219 81 176 6.81e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953120 AT4G11560.1 48.200 500 182 6 27 481 99 566 8.09e-150 441
Msa0953120 AT4G11560.2 50.119 421 147 4 27 416 99 487 2.97e-133 395
Msa0953120 AT2G25120.1 39.237 367 160 6 5 367 46 353 7.07e-63 210
Msa0953120 AT4G23120.1 37.143 350 154 7 29 367 29 323 4.45e-55 189
Msa0953120 AT3G43990.1 33.676 389 181 7 19 393 33 358 2.08e-51 180
Msa0953120 AT3G48050.1 44.444 99 52 2 121 219 89 184 1.88e-18 89.7
Msa0953120 AT3G48050.2 44.444 99 52 2 121 219 89 184 1.88e-18 89.7
Msa0953120 AT3G48060.1 44.444 99 52 2 121 219 89 184 2.03e-18 89.7
Msa0953120 AT3G48060.3 44.444 99 52 2 121 219 89 184 2.03e-18 89.7
Msa0953120 AT3G48060.2 44.444 99 52 2 121 219 90 185 2.05e-18 89.7

Find 95 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAACCTGTTAGGGTTTC+CGG 0.161064 6_3:-48827649 Msa0953120:CDS
CTGTTACGCCGTTTATTAAA+TGG 0.186955 6_3:-48824758 Msa0953120:CDS
TGATCATCAAGCTTCCATTT+TGG 0.220360 6_3:+48826454 None:intergenic
GCTAACTGATAAGGACTATA+TGG 0.240594 6_3:-48826193 Msa0953120:CDS
GCATCGCTTGTGGTTCTTCC+TGG 0.247620 6_3:-48823456 Msa0953120:intron
GAAGGCATTAACATTAGTTT+AGG 0.291382 6_3:-48825785 Msa0953120:CDS
CTGCATGTGTTGTGGCTCAT+TGG 0.306391 6_3:+48823759 None:intergenic
AACCCATTGGTGAACCTGTT+AGG 0.325935 6_3:-48827657 Msa0953120:CDS
GATGAAAATAGCAAAGCTTC+AGG 0.335980 6_3:-48823235 Msa0953120:CDS
TTTGAAGCTCGTAAATCATT+TGG 0.336337 6_3:-48823271 Msa0953120:CDS
GATTTACGAGCTTCAAATAT+AGG 0.347863 6_3:+48823277 None:intergenic
GACATCACAATATCCCAAAA+TGG 0.358463 6_3:-48826468 Msa0953120:CDS
TGCATGTGTTGTGGCTCATT+GGG 0.360527 6_3:+48823760 None:intergenic
GGTTCATCGGTCTCGATATC+AGG 0.370055 6_3:+48826108 None:intergenic
ACACAAATGAATTGAAACTA+TGG 0.372228 6_3:-48826218 Msa0953120:CDS
TAGCAAAGCTTCAGGGTGTT+TGG 0.378379 6_3:-48823227 Msa0953120:CDS
CTAGCTCTCCATTTAATAAA+CGG 0.393751 6_3:+48824750 None:intergenic
TTCTCCAGAGAAACTACAAC+TGG 0.400172 6_3:+48825552 None:intergenic
CCTGTTAGGGTTTCCGGAAA+AGG 0.401434 6_3:-48827643 Msa0953120:CDS
ATCTGGAAGTTGTTTGTGTA+TGG 0.401990 6_3:+48826281 None:intergenic
TGTCCCAGTTGTAGTTTCTC+TGG 0.418397 6_3:-48825556 Msa0953120:CDS
ACCCATTGGTGAACCTGTTA+GGG 0.418504 6_3:-48827656 Msa0953120:CDS
ACTTTGTCTTTAGATTCATT+TGG 0.419159 6_3:+48825758 None:intergenic
TTCTTCGTCTTCTTCTTCAC+TGG 0.423272 6_3:+48827699 None:intergenic
GCAATTTAGAAGTTTGATGT+TGG 0.425648 6_3:-48823355 Msa0953120:intron
TATGACACCTACTGAATTGA+AGG 0.438751 6_3:-48824708 Msa0953120:intron
TTTCAGTCCTTCGATCTCCT+TGG 0.441799 6_3:-48827601 Msa0953120:CDS
AGGACATGCTAACCGATATA+TGG 0.442148 6_3:-48823579 Msa0953120:intron
CTCATTCTTTGATATTTCCT+CGG 0.456129 6_3:+48823783 None:intergenic
ACCCTAACAGGTTCACCAAT+GGG 0.460362 6_3:+48827655 None:intergenic
CCAGATCGTAAGCAACATCC+TGG 0.464572 6_3:-48826264 Msa0953120:CDS
CAATTTAGAAGTTTGATGTT+GGG 0.469192 6_3:-48823354 Msa0953120:intron
CATTGGTCTTGTAAGATTCA+AGG 0.471102 6_3:+48823314 None:intergenic
CTAACTGATAAGGACTATAT+GGG 0.471847 6_3:-48826192 Msa0953120:CDS
CTATGACTTCAGCTTGATTG+TGG 0.472664 6_3:-48823500 Msa0953120:intron
CGATGAACCTGCTACCGATC+AGG 0.478725 6_3:-48826094 Msa0953120:CDS
CCAGGATGTTGCTTACGATC+TGG 0.481989 6_3:+48826264 None:intergenic
GTCAAGTGATGAGGCAGAGA+AGG 0.482946 6_3:-48827740 Msa0953120:CDS
ACCTTGATAATTGCAACATA+CGG 0.483692 6_3:+48827351 None:intergenic
ACACAGCAGCAAACAAATAG+AGG 0.485183 6_3:+48826979 None:intergenic
ACCTCAGGCAAAAGAAGCAC+AGG 0.490058 6_3:+48827387 None:intergenic
ATTCTGCAGGAACTTCATCT+TGG 0.491335 6_3:+48826337 None:intergenic
ACTATGGAAGCTAACTGATA+AGG 0.493553 6_3:-48826202 Msa0953120:CDS
CTGCAGGAACTTCATCTTGG+TGG 0.495652 6_3:+48826340 None:intergenic
ATTCATATACGAGTGTGTAT+TGG 0.501448 6_3:+48827575 None:intergenic
CAGCTGGAATGCATCGCTTG+TGG 0.505100 6_3:-48823466 Msa0953120:CDS
AATGGAAGCTTGATGATCAC+AGG 0.509765 6_3:-48826450 Msa0953120:CDS
GGCAGAGAAGGAGGAAGATA+AGG 0.518018 6_3:-48827728 Msa0953120:CDS
GCCGTATGTTGCAATTATCA+AGG 0.523913 6_3:-48827352 Msa0953120:intron
ACAGTTGGTATTTAATCTCA+AGG 0.524514 6_3:-48825475 Msa0953120:intron
AGACCTTCCTGATCGGTAGC+AGG 0.527053 6_3:+48826087 None:intergenic
ATTGGTCTTGTAAGATTCAA+GGG 0.528233 6_3:+48823315 None:intergenic
AGGCGGCATAAAGATGTCAT+TGG 0.531351 6_3:+48823297 None:intergenic
TACAACTGGGACAGCAACAT+CGG 0.533867 6_3:+48825566 None:intergenic
ATGAAAATAGCAAAGCTTCA+GGG 0.539064 6_3:-48823234 Msa0953120:CDS
ACAACTGGGACAGCAACATC+GGG 0.541960 6_3:+48825567 None:intergenic
GTTGAAGAAGCTAAACCCAT+TGG 0.559350 6_3:-48827670 Msa0953120:CDS
CGACAAACCCTTGTCACGAT+GGG 0.562197 6_3:+48825901 None:intergenic
CAATGAGCCACAACACATGC+AGG 0.566351 6_3:-48823758 Msa0953120:intron
AAGTGATGAGGCAGAGAAGG+AGG 0.567416 6_3:-48827737 Msa0953120:CDS
ATCGGGCCAGACAAAAGACT+TGG 0.569970 6_3:+48825584 None:intergenic
TAAAATTCACTAATATGCGA+TGG 0.571172 6_3:+48825942 None:intergenic
TTAGATACCTTCAATTCAGT+AGG 0.571340 6_3:+48824701 None:intergenic
TCTGATACTATCAACAATGA+AGG 0.573176 6_3:-48825803 Msa0953120:CDS
CTGATCGGTAGCAGGTTCAT+CGG 0.574816 6_3:+48826095 None:intergenic
GCTTGATGATCACAGGGCAG+TGG 0.574881 6_3:-48826443 Msa0953120:CDS
AACCCTAACAGGTTCACCAA+TGG 0.581846 6_3:+48827654 None:intergenic
CGAGTGTGTATTGGTCTCCA+AGG 0.587230 6_3:+48827584 None:intergenic
CTTAATCAGACCTTCCTGAT+CGG 0.591796 6_3:+48826080 None:intergenic
AGGAGATACCCATCGTGACA+AGG 0.593342 6_3:-48825909 Msa0953120:CDS
TTATGCATAACAGATTCTGC+AGG 0.595610 6_3:+48826324 None:intergenic
TCTCTGGAACCAGTAACACT+AGG 0.596217 6_3:-48825992 Msa0953120:intron
CAAACAAAAGCTACGACAGT+TGG 0.596612 6_3:-48825490 Msa0953120:CDS
AAAGATGAAGTCAAGTGATG+AGG 0.598053 6_3:-48827749 None:intergenic
CTCTGGAACCAGTAACACTA+GGG 0.598631 6_3:-48825991 Msa0953120:intron
GTGATGGATATTATCTGTGC+AGG 0.602192 6_3:-48823599 Msa0953120:CDS
CAGATCGTAAGCAACATCCT+GGG 0.603869 6_3:-48826263 Msa0953120:CDS
ATCTAAAGACAAAGTTCCGA+AGG 0.608846 6_3:-48825750 Msa0953120:intron
TAATATGCGATGGTGCTCAA+AGG 0.610864 6_3:+48825952 None:intergenic
TCTGGAAGTTGTTTGTGTAT+GGG 0.615838 6_3:+48826282 None:intergenic
TCGACAAACCCTTGTCACGA+TGG 0.616965 6_3:+48825900 None:intergenic
CTAAACTGAAAATAACAAGA+AGG 0.620219 6_3:+48826951 None:intergenic
CAAGGAGGGTTTGACTGCCG+AGG 0.636082 6_3:-48823800 Msa0953120:intron
AAAGCGACCTGCATGTGTTG+TGG 0.638769 6_3:+48823751 None:intergenic
TTGGTCTTGTAAGATTCAAG+GGG 0.641401 6_3:+48823316 None:intergenic
TTGGTCTCCAAGGAGATCGA+AGG 0.643471 6_3:+48827594 None:intergenic
GGAGATACCCATCGTGACAA+GGG 0.650994 6_3:-48825908 Msa0953120:CDS
ATCTGTTATGCATAAATGTG+TGG 0.655343 6_3:-48826316 Msa0953120:CDS
ATGGAAGCTTGATGATCACA+GGG 0.656842 6_3:-48826449 Msa0953120:CDS
TTACGAGCTTCAAATATAGG+CGG 0.669287 6_3:+48823280 None:intergenic
CCTCAGGCAAAAGAAGCACA+GGG 0.680303 6_3:+48827388 None:intergenic
ACTTTCTGCACAATAAACCC+AGG 0.690438 6_3:+48826246 None:intergenic
GAACCTGCTACCGATCAGGA+AGG 0.704604 6_3:-48826090 Msa0953120:intron
TCTCCAGAGAAACTACAACT+GGG 0.710558 6_3:+48825553 None:intergenic
CATTGTTGATAGTATCAGAG+CGG 0.733053 6_3:+48825807 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAGAGG+AGG + chr6_3:48823433-48823452 None:intergenic 15.0%
!! AGGAAAAAAAAAAAAAAAAG+AGG + chr6_3:48823436-48823455 None:intergenic 15.0%
!! AAAAGTTTAAGAACTAAATT+TGG + chr6_3:48823493-48823512 None:intergenic 15.0%
!! TATTATTAGTAGATTTAACA+AGG + chr6_3:48823647-48823666 None:intergenic 15.0%
!!! TTTTTCATAATAAATGCATA+TGG - chr6_3:48823682-48823701 Msa0953120:intron 15.0%
!! GATATATTATTAGTGTATAA+AGG - chr6_3:48823797-48823816 Msa0953120:CDS 15.0%
!! TGTTATAAACATATAATGAT+AGG - chr6_3:48824417-48824436 Msa0953120:intron 15.0%
!!! TTTTTTAATTTTTCTCTCAT+CGG + chr6_3:48825126-48825145 None:intergenic 15.0%
!! AAAATTAAAAAAGACAAATG+TGG - chr6_3:48825134-48825153 Msa0953120:intron 15.0%
!! CTTATTAAAAAATGATTATG+AGG - chr6_3:48825680-48825699 Msa0953120:intron 15.0%
!! AAAAAAGAAGATTAGAAATA+TGG + chr6_3:48826298-48826317 None:intergenic 15.0%
!! AAATATGTTGAAAATGATAA+AGG + chr6_3:48826448-48826467 None:intergenic 15.0%
!!! TTAATGTTTTAACCATATAT+CGG + chr6_3:48827403-48827422 None:intergenic 15.0%
!!! GATTCTATTATTGTTATTCT+TGG - chr6_3:48823530-48823549 Msa0953120:intron 20.0%
!! ATGTACAAATTATCAACAAA+GGG + chr6_3:48823725-48823744 None:intergenic 20.0%
!!! TGTGTGATTTTTAATTATCA+TGG + chr6_3:48824160-48824179 None:intergenic 20.0%
!! TATATAACAACTCGAAAATT+TGG + chr6_3:48824359-48824378 None:intergenic 20.0%
!!! TTAAAGAATGGTGTTTTTTA+AGG - chr6_3:48824922-48824941 Msa0953120:intron 20.0%
!!! TAAAGAATGGTGTTTTTTAA+GGG - chr6_3:48824923-48824942 Msa0953120:intron 20.0%
!!! TGGACATTATTTTTTCAATA+TGG - chr6_3:48825516-48825535 Msa0953120:CDS 20.0%
!!! ACTACATTTGATTTTGAATA+AGG - chr6_3:48825600-48825619 Msa0953120:intron 20.0%
!! AGATTAATCTCTGATAAAAT+GGG - chr6_3:48825703-48825722 Msa0953120:intron 20.0%
!!! TTAACTAAGAACAATTTTCA+AGG + chr6_3:48826101-48826120 None:intergenic 20.0%
!! ATGAATTGTTCTGTAAAATA+AGG + chr6_3:48826187-48826206 None:intergenic 20.0%
!!! TTTTATTCAGTCAATACAAT+TGG - chr6_3:48826417-48826436 Msa0953120:CDS 20.0%
!!! AACACATTCTAAGAAAAAAT+TGG - chr6_3:48826566-48826585 Msa0953120:intron 20.0%
!!! TTGTTTTTCTTGTATTTTCA+TGG - chr6_3:48826723-48826742 Msa0953120:intron 20.0%
!! TCATAAAATGATTTAAGTGT+TGG - chr6_3:48826935-48826954 Msa0953120:intron 20.0%
!! TAATGTTATCTGTTAAATTG+TGG - chr6_3:48827257-48827276 Msa0953120:intron 20.0%
!! AATGTTATCTGTTAAATTGT+GGG - chr6_3:48827258-48827277 Msa0953120:intron 20.0%
!!! TTGAATATTAGCTTTTCTAT+TGG - chr6_3:48827292-48827311 Msa0953120:intron 20.0%
! CATGTACAAATTATCAACAA+AGG + chr6_3:48823726-48823745 None:intergenic 25.0%
! ATATTAATGGGATGATATTG+TGG - chr6_3:48823886-48823905 Msa0953120:intron 25.0%
!!! TCCTGTCTGTTTTTTTTTTT+AGG - chr6_3:48823955-48823974 Msa0953120:intron 25.0%
! ACCTAAAAAAAAAAACAGAC+AGG + chr6_3:48823959-48823978 None:intergenic 25.0%
! CTAAACTGAAAATAACAAGA+AGG + chr6_3:48824019-48824038 None:intergenic 25.0%
! GAACAAAAAACAAAAGTTGT+CGG + chr6_3:48824118-48824137 None:intergenic 25.0%
!!! ACTTTTGTTTTTTGTTCTCT+CGG - chr6_3:48824121-48824140 Msa0953120:intron 25.0%
! TTATCAAAAGCCAAAAAATG+TGG + chr6_3:48824328-48824347 None:intergenic 25.0%
!!! TTTTTTGGCTTTTGATAACA+AGG - chr6_3:48824330-48824349 Msa0953120:intron 25.0%
! TCAGAAAATAGAAAAGAGAA+GGG + chr6_3:48824453-48824472 None:intergenic 25.0%
! ATCAGAAAATAGAAAAGAGA+AGG + chr6_3:48824454-48824473 None:intergenic 25.0%
! ACACAAATGAATTGAAACTA+TGG - chr6_3:48824749-48824768 Msa0953120:CDS 25.0%
! TAAAATTCACTAATATGCGA+TGG + chr6_3:48825028-48825047 None:intergenic 25.0%
! ACTTTGTCTTTAGATTCATT+TGG + chr6_3:48825212-48825231 None:intergenic 25.0%
! ATCATAAGTTAAAAACCTCA+AGG + chr6_3:48825328-48825347 None:intergenic 25.0%
!!! ACATTTGATTTTGAATAAGG+TGG - chr6_3:48825603-48825622 Msa0953120:intron 25.0%
!!! CATTTGATTTTGAATAAGGT+GGG - chr6_3:48825604-48825623 Msa0953120:intron 25.0%
! GAGATTAATCTCTGATAAAA+TGG - chr6_3:48825702-48825721 Msa0953120:intron 25.0%
! GATTAATCTCTGATAAAATG+GGG - chr6_3:48825704-48825723 Msa0953120:intron 25.0%
! TATATATAACCTAGTTGAGA+CGG + chr6_3:48825730-48825749 None:intergenic 25.0%
! CATCAGTACATAATAACATA+TGG + chr6_3:48825754-48825773 None:intergenic 25.0%
! GGTTTACTATTATTATCAGT+AGG - chr6_3:48825789-48825808 Msa0953120:CDS 25.0%
! ACAAAGTTTACAATACAAAC+AGG + chr6_3:48825873-48825892 None:intergenic 25.0%
!! TTTTAACATTCAGAATGATG+TGG - chr6_3:48825927-48825946 Msa0953120:CDS 25.0%
!! TTCGTATTATGATGGAATTA+AGG - chr6_3:48826051-48826070 Msa0953120:intron 25.0%
!!! AAATTTTTTGCAAGTTGTGA+TGG - chr6_3:48826138-48826157 Msa0953120:CDS 25.0%
!!! AATTTTTTGCAAGTTGTGAT+GGG - chr6_3:48826139-48826158 Msa0953120:CDS 25.0%
!! GTCATATTCAATACTTTTGA+AGG + chr6_3:48826245-48826264 None:intergenic 25.0%
! AATTAATAGCGTAATTGACA+CGG + chr6_3:48826371-48826390 None:intergenic 25.0%
!! AAATTTTCCAACCTTTTCTT+TGG - chr6_3:48826595-48826614 Msa0953120:intron 25.0%
!! AATTTTCCAACCTTTTCTTT+GGG - chr6_3:48826596-48826615 Msa0953120:intron 25.0%
! CTATTTATGTTACTAAGCAA+TGG - chr6_3:48826673-48826692 Msa0953120:intron 25.0%
! AAATTGTTAGATCAAACGTA+TGG + chr6_3:48826705-48826724 None:intergenic 25.0%
!!! AATTTTTTGCGATGTTTTGA+AGG - chr6_3:48826880-48826899 Msa0953120:intron 25.0%
!! TATTCCTGTACTTTAGAAAA+AGG - chr6_3:48826987-48827006 Msa0953120:CDS 25.0%
! TAACTTTCGAAAGATTAATC+TGG - chr6_3:48827111-48827130 Msa0953120:intron 25.0%
! TTATTGAATATTTGAACCCA+AGG - chr6_3:48827149-48827168 Msa0953120:intron 25.0%
! AACAGATAACATTAGAATGT+CGG + chr6_3:48827251-48827270 None:intergenic 25.0%
! AATATGATGCATCTAATGTT+AGG + chr6_3:48827563-48827582 None:intergenic 25.0%
! CAATTTAGAAGTTTGATGTT+GGG - chr6_3:48827613-48827632 Msa0953120:CDS 25.0%
! TTTTATGTCTCTTCCTTTTC+CGG + chr6_3:48823340-48823359 None:intergenic 30.0%
ATTCATATACGAGTGTGTAT+TGG + chr6_3:48823395-48823414 None:intergenic 30.0%
! ACCTTGATAATTGCAACATA+CGG + chr6_3:48823619-48823638 None:intergenic 30.0%
TCCCATTAATATATCAACCA+CGG + chr6_3:48823878-48823897 None:intergenic 30.0%
! TTATTTTCAGTTTAGCAGTC+CGG - chr6_3:48824024-48824043 Msa0953120:intron 30.0%
ATGTTGTTCTGTTTATGTGT+TGG - chr6_3:48824089-48824108 Msa0953120:intron 30.0%
AGAAAATAGAAAAGAGAAGG+GGG + chr6_3:48824451-48824470 None:intergenic 30.0%
CAGAAAATAGAAAAGAGAAG+GGG + chr6_3:48824452-48824471 None:intergenic 30.0%
CTGACAAAAAAAAACATCTC+TGG + chr6_3:48824479-48824498 None:intergenic 30.0%
!!! CAGAGATGTTTTTTTTTGTC+AGG - chr6_3:48824477-48824496 Msa0953120:intron 30.0%
ATCTGTTATGCATAAATGTG+TGG - chr6_3:48824651-48824670 Msa0953120:intron 30.0%
CTAACTGATAAGGACTATAT+GGG - chr6_3:48824775-48824794 Msa0953120:intron 30.0%
TCAAAAAACTCGTCAATGTT+TGG - chr6_3:48824828-48824847 Msa0953120:intron 30.0%
CAAAAAACTCGTCAATGTTT+GGG - chr6_3:48824829-48824848 Msa0953120:intron 30.0%
GATAGGAGAAACTTAAAGAA+TGG - chr6_3:48824910-48824929 Msa0953120:intron 30.0%
TCTGATACTATCAACAATGA+AGG - chr6_3:48825164-48825183 Msa0953120:intron 30.0%
!! GAAGGCATTAACATTAGTTT+AGG - chr6_3:48825182-48825201 Msa0953120:intron 30.0%
AAGAGATCACAATCACAAAT+GGG + chr6_3:48825257-48825276 None:intergenic 30.0%
! ATTGTTTTCTCTTTTCCTTG+AGG - chr6_3:48825310-48825329 Msa0953120:intron 30.0%
CTGTAGATTGAAAAAGGTAA+AGG + chr6_3:48825359-48825378 None:intergenic 30.0%
! ACAGTTGGTATTTAATCTCA+AGG - chr6_3:48825492-48825511 Msa0953120:CDS 30.0%
TTGGTATTTAATCTCAAGGT+TGG - chr6_3:48825496-48825515 Msa0953120:CDS 30.0%
!! CTGATGAATTACTGATTTAG+TGG - chr6_3:48825768-48825787 Msa0953120:CDS 30.0%
!! TTTGTCTTTGAGCTTTAAAC+AGG - chr6_3:48825888-48825907 Msa0953120:CDS 30.0%
!! TTGTCTTTGAGCTTTAAACA+GGG - chr6_3:48825889-48825908 Msa0953120:CDS 30.0%
CCATCATAATACGAAAACTT+TGG + chr6_3:48826046-48826065 None:intergenic 30.0%
! CCAAAGTTTTCGTATTATGA+TGG - chr6_3:48826043-48826062 Msa0953120:intron 30.0%
!! ATGATGGAATTAAGGTTTTG+AGG - chr6_3:48826059-48826078 Msa0953120:intron 30.0%
!! TGATGGAATTAAGGTTTTGA+GGG - chr6_3:48826060-48826079 Msa0953120:intron 30.0%
! CTAGCTCTCCATTTAATAAA+CGG + chr6_3:48826220-48826239 None:intergenic 30.0%
TTAGATACCTTCAATTCAGT+AGG + chr6_3:48826269-48826288 None:intergenic 30.0%
! ATTTTCCAACCTTTTCTTTG+GGG - chr6_3:48826597-48826616 Msa0953120:intron 30.0%
TTGTATTGTGTTGAACTTAG+TGG - chr6_3:48826907-48826926 Msa0953120:intron 30.0%
!!! TTAGCCTTTTTCTAAAGTAC+AGG + chr6_3:48826994-48827013 None:intergenic 30.0%
! TGTACTTTAGAAAAAGGCTA+AGG - chr6_3:48826993-48827012 Msa0953120:CDS 30.0%
! GTACTTTAGAAAAAGGCTAA+GGG - chr6_3:48826994-48827013 Msa0953120:intron 30.0%
AGATTAATCTGGTTATTCTG+TGG - chr6_3:48827122-48827141 Msa0953120:intron 30.0%
CTCATTCTTTGATATTTCCT+CGG + chr6_3:48827187-48827206 None:intergenic 30.0%
AAACTTCTAAATTGCCTATG+GGG + chr6_3:48827607-48827626 None:intergenic 30.0%
CAAACTTCTAAATTGCCTAT+GGG + chr6_3:48827608-48827627 None:intergenic 30.0%
TCAAACTTCTAAATTGCCTA+TGG + chr6_3:48827609-48827628 None:intergenic 30.0%
GCAATTTAGAAGTTTGATGT+TGG - chr6_3:48827612-48827631 Msa0953120:CDS 30.0%
!! ATTGGTCTTGTAAGATTCAA+GGG + chr6_3:48827655-48827674 None:intergenic 30.0%
GATTTACGAGCTTCAAATAT+AGG + chr6_3:48827693-48827712 None:intergenic 30.0%
! TTTGAAGCTCGTAAATCATT+TGG - chr6_3:48827696-48827715 Msa0953120:CDS 30.0%
ATGAAAATAGCAAAGCTTCA+GGG - chr6_3:48827733-48827752 Msa0953120:CDS 30.0%
TTTCGCATGTTGTCACTATT+TGG - chr6_3:48823462-48823481 Msa0953120:CDS 35.0%
TTCGCATGTTGTCACTATTT+GGG - chr6_3:48823463-48823482 Msa0953120:CDS 35.0%
! GGCTTTTGATATTTAACCTC+AGG + chr6_3:48823598-48823617 None:intergenic 35.0%
!! AGTGTATAAAGGTGTTGTCA+TGG - chr6_3:48823808-48823827 Msa0953120:intron 35.0%
!! GATTTTCAATAATTTGCCCG+TGG - chr6_3:48823858-48823877 Msa0953120:intron 35.0%
CCCATTAATATATCAACCAC+GGG + chr6_3:48823877-48823896 None:intergenic 35.0%
! CCCGTGGTTGATATATTAAT+GGG - chr6_3:48823874-48823893 Msa0953120:intron 35.0%
ATGATATTGTGGATGAGATC+AGG - chr6_3:48823897-48823916 Msa0953120:intron 35.0%
TTGTTCTGTTTATGTGTTGG+TGG - chr6_3:48824092-48824111 Msa0953120:intron 35.0%
ACAGGGAAGCTAATCTAAAA+AGG + chr6_3:48824249-48824268 None:intergenic 35.0%
GAATATGCACGTGTTGTATT+TGG - chr6_3:48824289-48824308 Msa0953120:intron 35.0%
GACATCACAATATCCCAAAA+TGG - chr6_3:48824499-48824518 Msa0953120:intron 35.0%
! GATCATCAAGCTTCCATTTT+GGG + chr6_3:48824515-48824534 None:intergenic 35.0%
! TGATCATCAAGCTTCCATTT+TGG + chr6_3:48824516-48824535 None:intergenic 35.0%
TCCAGATGAAGCAGAAAAAA+AGG - chr6_3:48824555-48824574 Msa0953120:intron 35.0%
CCAGATGAAGCAGAAAAAAA+GGG - chr6_3:48824556-48824575 Msa0953120:intron 35.0%
TTATGCATAACAGATTCTGC+AGG + chr6_3:48824646-48824665 None:intergenic 35.0%
TCTGGAAGTTGTTTGTGTAT+GGG + chr6_3:48824688-48824707 None:intergenic 35.0%
ATCTGGAAGTTGTTTGTGTA+TGG + chr6_3:48824689-48824708 None:intergenic 35.0%
ACTATGGAAGCTAACTGATA+AGG - chr6_3:48824765-48824784 Msa0953120:CDS 35.0%
GCTAACTGATAAGGACTATA+TGG - chr6_3:48824774-48824793 Msa0953120:intron 35.0%
!!! AGAATGGTGTTTTTTAAGGG+AGG - chr6_3:48824926-48824945 Msa0953120:intron 35.0%
!!! GTGAATTTTAAAGCGCTAAC+AGG - chr6_3:48825038-48825057 Msa0953120:intron 35.0%
!! CATTGTTGATAGTATCAGAG+CGG + chr6_3:48825163-48825182 None:intergenic 35.0%
ATCTAAAGACAAAGTTCCGA+AGG - chr6_3:48825217-48825236 Msa0953120:intron 35.0%
CAAGAGATCACAATCACAAA+TGG + chr6_3:48825258-48825277 None:intergenic 35.0%
GGAGTTCTGTAGATTGAAAA+AGG + chr6_3:48825365-48825384 None:intergenic 35.0%
!! TGTCTTTGAGCTTTAAACAG+GGG - chr6_3:48825890-48825909 Msa0953120:CDS 35.0%
!!! GATGGAATTAAGGTTTTGAG+GGG - chr6_3:48826061-48826080 Msa0953120:intron 35.0%
!!! ATGGAATTAAGGTTTTGAGG+GGG - chr6_3:48826062-48826081 Msa0953120:intron 35.0%
CTGTTACGCCGTTTATTAAA+TGG - chr6_3:48826209-48826228 Msa0953120:CDS 35.0%
TATGACACCTACTGAATTGA+AGG - chr6_3:48826259-48826278 Msa0953120:CDS 35.0%
ATAGTGTCTGATCTGATTAG+AGG + chr6_3:48826657-48826676 None:intergenic 35.0%
TTGTTAGATCAAACGTATGG+TGG + chr6_3:48826702-48826721 None:intergenic 35.0%
TATCGTCAATTGATCGCATA+CGG + chr6_3:48826793-48826812 None:intergenic 35.0%
TAAAAACCAAACAGCACATG+AGG + chr6_3:48827039-48827058 None:intergenic 35.0%
TTGAATATTTGAACCCAAGG+AGG - chr6_3:48827152-48827171 Msa0953120:intron 35.0%
TGAATATTTGAACCCAAGGA+GGG - chr6_3:48827153-48827172 Msa0953120:intron 35.0%
GATAACATTAGAATGTCGGA+TGG + chr6_3:48827247-48827266 None:intergenic 35.0%
ATTTGCAACCAGCAAAAAGT+TGG - chr6_3:48827344-48827363 Msa0953120:intron 35.0%
!! TTGGTCTTGTAAGATTCAAG+GGG + chr6_3:48827654-48827673 None:intergenic 35.0%
!! CATTGGTCTTGTAAGATTCA+AGG + chr6_3:48827656-48827675 None:intergenic 35.0%
TTACGAGCTTCAAATATAGG+CGG + chr6_3:48827690-48827709 None:intergenic 35.0%
GATGAAAATAGCAAAGCTTC+AGG - chr6_3:48827732-48827751 Msa0953120:CDS 35.0%
TTCTTCGTCTTCTTCTTCAC+TGG + chr6_3:48823271-48823290 None:intergenic 40.0%
GTTGAAGAAGCTAAACCCAT+TGG - chr6_3:48823297-48823316 Msa0953120:CDS 40.0%
GACAACATGCGAAAAGCAAA+AGG + chr6_3:48823456-48823475 None:intergenic 40.0%
GCCGTATGTTGCAATTATCA+AGG - chr6_3:48823615-48823634 Msa0953120:CDS 40.0%
! GCCCGTGGTTGATATATTAA+TGG - chr6_3:48823873-48823892 Msa0953120:intron 40.0%
ACACAGCAGCAAACAAATAG+AGG + chr6_3:48823991-48824010 None:intergenic 40.0%
! GTTTAGCAGTCCGGTTATTT+TGG - chr6_3:48824033-48824052 Msa0953120:intron 40.0%
!!! AGTCCGGTTATTTTGGCTTT+CGG - chr6_3:48824040-48824059 Msa0953120:intron 40.0%
ACACCGAAAGCCAAAATAAC+CGG + chr6_3:48824046-48824065 None:intergenic 40.0%
CACAACAACAAAAAGACCCA+AGG + chr6_3:48824069-48824088 None:intergenic 40.0%
!!! TTGTTTTTTGTTCTCTCGGC+TGG - chr6_3:48824125-48824144 Msa0953120:intron 40.0%
! TAGCTTCCCTGTCTTGTTAT+TGG - chr6_3:48824257-48824276 Msa0953120:intron 40.0%
GGATTGCCAATAACAAGACA+GGG + chr6_3:48824266-48824285 None:intergenic 40.0%
TACAACACGTGCATATTCCA+GGG + chr6_3:48824287-48824306 None:intergenic 40.0%
ATACAACACGTGCATATTCC+AGG + chr6_3:48824288-48824307 None:intergenic 40.0%
ACGTGTTGTATTTGGCATGT+CGG - chr6_3:48824297-48824316 Msa0953120:intron 40.0%
! AATGGAAGCTTGATGATCAC+AGG - chr6_3:48824517-48824536 Msa0953120:intron 40.0%
! ATGGAAGCTTGATGATCACA+GGG - chr6_3:48824518-48824537 Msa0953120:intron 40.0%
!!! CCCTTTTTTTCTGCTTCATC+TGG + chr6_3:48824559-48824578 None:intergenic 40.0%
GATGAAGCAGAAAAAAAGGG+AGG - chr6_3:48824559-48824578 Msa0953120:intron 40.0%
ATTCTGCAGGAACTTCATCT+TGG + chr6_3:48824633-48824652 None:intergenic 40.0%
ACTTTCTGCACAATAAACCC+AGG + chr6_3:48824724-48824743 None:intergenic 40.0%
CTTAATCAGACCTTCCTGAT+CGG + chr6_3:48824890-48824909 None:intergenic 40.0%
AGGAAGGTCTGATTAAGGAT+AGG - chr6_3:48824893-48824912 Msa0953120:intron 40.0%
TCGAAATAGTCTCCATTCTC+TGG - chr6_3:48824959-48824978 Msa0953120:intron 40.0%
TAATATGCGATGGTGCTCAA+AGG + chr6_3:48825018-48825037 None:intergenic 40.0%
!! GGTACTTCAAGAAGTACCTT+CGG + chr6_3:48825236-48825255 None:intergenic 40.0%
TGTGATTGTGATCTCTTGTG+TGG - chr6_3:48825260-48825279 Msa0953120:intron 40.0%
! AGAACTCCAAGTCTTTTGTC+TGG - chr6_3:48825377-48825396 Msa0953120:intron 40.0%
TCTCCAGAGAAACTACAACT+GGG + chr6_3:48825417-48825436 None:intergenic 40.0%
TTCTCCAGAGAAACTACAAC+TGG + chr6_3:48825418-48825437 None:intergenic 40.0%
CAAACAAAAGCTACGACAGT+TGG - chr6_3:48825477-48825496 Msa0953120:CDS 40.0%
AGAATGATGTGGTCGACTAA+CGG - chr6_3:48825938-48825957 Msa0953120:CDS 40.0%
!!! GGTGGATGCTTTTTAAGTTC+AGG - chr6_3:48825959-48825978 Msa0953120:CDS 40.0%
CCGTAGATGATGTAGATCAA+GGG + chr6_3:48826017-48826036 None:intergenic 40.0%
CCCTTGATCTACATCATCTA+CGG - chr6_3:48826014-48826033 Msa0953120:intron 40.0%
ACCGTAGATGATGTAGATCA+AGG + chr6_3:48826018-48826037 None:intergenic 40.0%
TTTCATGGCTGCATCATTCT+TGG - chr6_3:48826738-48826757 Msa0953120:intron 40.0%
TTCATGGCTGCATCATTCTT+GGG - chr6_3:48826739-48826758 Msa0953120:intron 40.0%
!! GTGATGGATATTATCTGTGC+AGG - chr6_3:48827368-48827387 Msa0953120:CDS 40.0%
AGGACATGCTAACCGATATA+TGG - chr6_3:48827388-48827407 Msa0953120:CDS 40.0%
GCTGAAGTCATAGAAATAGC+AGG + chr6_3:48827460-48827479 None:intergenic 40.0%
CTATGACTTCAGCTTGATTG+TGG - chr6_3:48827467-48827486 Msa0953120:intron 40.0%
AAATGTATGCATGACCCCAT+AGG - chr6_3:48827590-48827609 Msa0953120:CDS 40.0%
AACCCATTGGTGAACCTGTT+AGG - chr6_3:48823310-48823329 Msa0953120:CDS 45.0%
ACCCATTGGTGAACCTGTTA+GGG - chr6_3:48823311-48823330 Msa0953120:CDS 45.0%
ACCCTAACAGGTTCACCAAT+GGG + chr6_3:48823315-48823334 None:intergenic 45.0%
AACCCTAACAGGTTCACCAA+TGG + chr6_3:48823316-48823335 None:intergenic 45.0%
TTTCAGTCCTTCGATCTCCT+TGG - chr6_3:48823366-48823385 Msa0953120:intron 45.0%
GTGTTACCTACTCTTTCTGC+AGG - chr6_3:48823552-48823571 Msa0953120:intron 45.0%
TTACCTACTCTTTCTGCAGG+AGG - chr6_3:48823555-48823574 Msa0953120:intron 45.0%
!!! ATTTTGGCTTTCGGTGTCCT+TGG - chr6_3:48824049-48824068 Msa0953120:intron 45.0%
!!! TTTTGGCTTTCGGTGTCCTT+GGG - chr6_3:48824050-48824069 Msa0953120:intron 45.0%
GGGATTGCCAATAACAAGAC+AGG + chr6_3:48824267-48824286 None:intergenic 45.0%
!! GTCTTGTTATTGGCAATCCC+TGG - chr6_3:48824267-48824286 Msa0953120:intron 45.0%
CGTGTTGTATTTGGCATGTC+GGG - chr6_3:48824298-48824317 Msa0953120:intron 45.0%
!!! GTCGGGTTGTCCACATTTTT+TGG - chr6_3:48824315-48824334 Msa0953120:intron 45.0%
GAAGCAGAAAAAAAGGGAGG+TGG - chr6_3:48824562-48824581 Msa0953120:intron 45.0%
AAAAAAAGGGAGGTGGTAGC+TGG - chr6_3:48824569-48824588 Msa0953120:intron 45.0%
CAGATCGTAAGCAACATCCT+GGG - chr6_3:48824704-48824723 Msa0953120:intron 45.0%
CGATCAGGAAGGTCTGATTA+AGG - chr6_3:48824888-48824907 Msa0953120:intron 45.0%
!! GTGTTACTGGTTCCAGAGAA+TGG + chr6_3:48824974-48824993 None:intergenic 45.0%
!! TCTCTGGAACCAGTAACACT+AGG - chr6_3:48824975-48824994 Msa0953120:intron 45.0%
!! CTCTGGAACCAGTAACACTA+GGG - chr6_3:48824976-48824995 Msa0953120:intron 45.0%
GCACAATTCCCTAGTGTTAC+TGG + chr6_3:48824987-48825006 None:intergenic 45.0%
TACAACTGGGACAGCAACAT+CGG + chr6_3:48825404-48825423 None:intergenic 45.0%
TGTCCCAGTTGTAGTTTCTC+TGG - chr6_3:48825411-48825430 Msa0953120:intron 45.0%
! GGTGGGACAGTTACAGTTTT+TGG - chr6_3:48825621-48825640 Msa0953120:intron 45.0%
!!! AATTAAGGTTTTGAGGGGGC+TGG - chr6_3:48826066-48826085 Msa0953120:intron 45.0%
!! TTCCAACCTTTTCTTTGGGG+TGG - chr6_3:48826600-48826619 Msa0953120:intron 45.0%
!!! TCCAACCTTTTCTTTGGGGT+GGG - chr6_3:48826601-48826620 Msa0953120:intron 45.0%
! TGAGAACCTCATGTGCTGTT+TGG - chr6_3:48827030-48827049 Msa0953120:intron 45.0%
TGCATGTGTTGTGGCTCATT+GGG + chr6_3:48827210-48827229 None:intergenic 45.0%
!!! TGTGGCTCTACTTTTTCAGC+TGG - chr6_3:48827485-48827504 Msa0953120:intron 45.0%
AGGCGGCATAAAGATGTCAT+TGG + chr6_3:48827673-48827692 None:intergenic 45.0%
! TAGCAAAGCTTCAGGGTGTT+TGG - chr6_3:48827740-48827759 Msa0953120:CDS 45.0%
GTCAAGTGATGAGGCAGAGA+AGG - chr6_3:48823227-48823246 Msa0953120:CDS 50.0%
AAGTGATGAGGCAGAGAAGG+AGG - chr6_3:48823230-48823249 Msa0953120:CDS 50.0%
GGCAGAGAAGGAGGAAGATA+AGG - chr6_3:48823239-48823258 Msa0953120:CDS 50.0%
GGTGAACCTGTTAGGGTTTC+CGG - chr6_3:48823318-48823337 Msa0953120:CDS 50.0%
! CCTTTTCCGGAAACCCTAAC+AGG + chr6_3:48823327-48823346 None:intergenic 50.0%
CCTGTTAGGGTTTCCGGAAA+AGG - chr6_3:48823324-48823343 Msa0953120:CDS 50.0%
TTGGTCTCCAAGGAGATCGA+AGG + chr6_3:48823376-48823395 None:intergenic 50.0%
! CGAGTGTGTATTGGTCTCCA+AGG + chr6_3:48823386-48823405 None:intergenic 50.0%
! CCTCAGGCAAAAGAAGCACA+GGG + chr6_3:48823582-48823601 None:intergenic 50.0%
! ACCTCAGGCAAAAGAAGCAC+AGG + chr6_3:48823583-48823602 None:intergenic 50.0%
TGTGGATGAGATCAGGCAGA+TGG - chr6_3:48823904-48823923 Msa0953120:intron 50.0%
GTGGATGAGATCAGGCAGAT+GGG - chr6_3:48823905-48823924 Msa0953120:intron 50.0%
CTGCAGGAACTTCATCTTGG+TGG + chr6_3:48824630-48824649 None:intergenic 50.0%
! CCAGGATGTTGCTTACGATC+TGG + chr6_3:48824706-48824725 None:intergenic 50.0%
CCAGATCGTAAGCAACATCC+TGG - chr6_3:48824703-48824722 Msa0953120:intron 50.0%
GGTTCATCGGTCTCGATATC+AGG + chr6_3:48824862-48824881 None:intergenic 50.0%
CTGATCGGTAGCAGGTTCAT+CGG + chr6_3:48824875-48824894 None:intergenic 50.0%
AGGAGATACCCATCGTGACA+AGG - chr6_3:48825058-48825077 Msa0953120:intron 50.0%
GGAGATACCCATCGTGACAA+GGG - chr6_3:48825059-48825078 Msa0953120:intron 50.0%
CGACAAACCCTTGTCACGAT+GGG + chr6_3:48825069-48825088 None:intergenic 50.0%
TCGACAAACCCTTGTCACGA+TGG + chr6_3:48825070-48825089 None:intergenic 50.0%
ATCGGGCCAGACAAAAGACT+TGG + chr6_3:48825386-48825405 None:intergenic 50.0%
ACAACTGGGACAGCAACATC+GGG + chr6_3:48825403-48825422 None:intergenic 50.0%
AAAATGGGGCCGTCTCAACT+AGG - chr6_3:48825718-48825737 Msa0953120:intron 50.0%
ATGATGTGGTCGACTAACGG+TGG - chr6_3:48825941-48825960 Msa0953120:CDS 50.0%
!!! CCAACCTTTTCTTTGGGGTG+GGG - chr6_3:48826602-48826621 Msa0953120:intron 50.0%
AACTCCCCACCCCAAAGAAA+AGG + chr6_3:48826609-48826628 None:intergenic 50.0%
! TTTGGGGTGGGGAGTTAGAA+GGG - chr6_3:48826613-48826632 Msa0953120:intron 50.0%
CTGCATGTGTTGTGGCTCAT+TGG + chr6_3:48827211-48827230 None:intergenic 50.0%
CAATGAGCCACAACACATGC+AGG - chr6_3:48827209-48827228 Msa0953120:intron 50.0%
AAAGCGACCTGCATGTGTTG+TGG + chr6_3:48827219-48827238 None:intergenic 50.0%
! CCATCACGCCAACTTTTTGC+TGG + chr6_3:48827355-48827374 None:intergenic 50.0%
CCAGCAAAAAGTTGGCGTGA+TGG - chr6_3:48827352-48827371 Msa0953120:intron 50.0%
! CTGGTTTGCCTCTTGTGATG+CGG - chr6_3:48827530-48827549 Msa0953120:intron 50.0%
GGTCCTCCTGCAGAAAGAGT+AGG + chr6_3:48823561-48823580 None:intergenic 55.0%
! CCCTGTGCTTCTTTTGCCTG+AGG - chr6_3:48823579-48823598 Msa0953120:intron 55.0%
! GCTTGATGATCACAGGGCAG+TGG - chr6_3:48824524-48824543 Msa0953120:intron 55.0%
CGATGAACCTGCTACCGATC+AGG - chr6_3:48824873-48824892 Msa0953120:intron 55.0%
GAACCTGCTACCGATCAGGA+AGG - chr6_3:48824877-48824896 Msa0953120:intron 55.0%
AGACCTTCCTGATCGGTAGC+AGG + chr6_3:48824883-48824902 None:intergenic 55.0%
!! TTTGAGGGGGCTGGTTCTTC+TGG - chr6_3:48826075-48826094 Msa0953120:intron 55.0%
CCCCACCCCAAAGAAAAGGT+TGG + chr6_3:48826605-48826624 None:intergenic 55.0%
!! CTTTGGGGTGGGGAGTTAGA+AGG - chr6_3:48826612-48826631 Msa0953120:intron 55.0%
TTGGGGTGGGGAGTTAGAAG+GGG - chr6_3:48826614-48826633 Msa0953120:intron 55.0%
TCGGCAGTCAAACCCTCCTT+GGG + chr6_3:48827168-48827187 None:intergenic 55.0%
CAGCTGGAATGCATCGCTTG+TGG - chr6_3:48827501-48827520 Msa0953120:intron 55.0%
GCATCGCTTGTGGTTCTTCC+TGG - chr6_3:48827511-48827530 Msa0953120:intron 55.0%
CGCATCACAAGAGGCAAACC+AGG + chr6_3:48827532-48827551 None:intergenic 55.0%
GACAGACACCGCATCACAAG+AGG + chr6_3:48827541-48827560 None:intergenic 55.0%
AGATGGGCAACGTGCAGCTG+CGG - chr6_3:48823921-48823940 Msa0953120:intron 60.0%
CTCGGCAGTCAAACCCTCCT+TGG + chr6_3:48827169-48827188 None:intergenic 60.0%
CAAGGAGGGTTTGACTGCCG+AGG - chr6_3:48827167-48827186 Msa0953120:intron 60.0%
TGGGCAACGTGCAGCTGCGG+AGG - chr6_3:48823924-48823943 Msa0953120:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 48823222 48827767 48823222 ID=Msa0953120;Name=Msa0953120
chr6_3 mRNA 48823222 48827767 48823222 ID=Msa0953120-mRNA-1;Parent=Msa0953120;Name=Msa0953120-mRNA-1;_AED=0.27;_eAED=0.29;_QI=0|0|0|0.72|1|1|11|0|510
chr6_3 exon 48827585 48827767 48827585 ID=Msa0953120-mRNA-1:exon:10685;Parent=Msa0953120-mRNA-1
chr6_3 exon 48827353 48827415 48827353 ID=Msa0953120-mRNA-1:exon:10684;Parent=Msa0953120-mRNA-1
chr6_3 exon 48826944 48827012 48826944 ID=Msa0953120-mRNA-1:exon:10683;Parent=Msa0953120-mRNA-1
chr6_3 exon 48826091 48826490 48826091 ID=Msa0953120-mRNA-1:exon:10682;Parent=Msa0953120-mRNA-1
chr6_3 exon 48825751 48826001 48825751 ID=Msa0953120-mRNA-1:exon:10681;Parent=Msa0953120-mRNA-1
chr6_3 exon 48825476 48825610 48825476 ID=Msa0953120-mRNA-1:exon:10680;Parent=Msa0953120-mRNA-1
chr6_3 exon 48824709 48824792 48824709 ID=Msa0953120-mRNA-1:exon:10679;Parent=Msa0953120-mRNA-1
chr6_3 exon 48823759 48823818 48823759 ID=Msa0953120-mRNA-1:exon:10678;Parent=Msa0953120-mRNA-1
chr6_3 exon 48823580 48823666 48823580 ID=Msa0953120-mRNA-1:exon:10677;Parent=Msa0953120-mRNA-1
chr6_3 exon 48823457 48823510 48823457 ID=Msa0953120-mRNA-1:exon:10676;Parent=Msa0953120-mRNA-1
chr6_3 exon 48823222 48823368 48823222 ID=Msa0953120-mRNA-1:exon:10675;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48827585 48827767 48827585 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48827353 48827415 48827353 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48826944 48827012 48826944 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48826091 48826490 48826091 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48825751 48826001 48825751 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48825476 48825610 48825476 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48824709 48824792 48824709 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48823759 48823818 48823759 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48823580 48823666 48823580 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48823457 48823510 48823457 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
chr6_3 CDS 48823222 48823368 48823222 ID=Msa0953120-mRNA-1:cds;Parent=Msa0953120-mRNA-1
Gene Sequence

>Msa0953120

ATGAAGTCAAGTGATGAGGCAGAGAAGGAGGAAGATAAGGAACTGTCCAGTGAAGAAGAAGACGAAGAATTGCAAGTTGAAGAAGCTAAACCCATTGGTGAACCTGTTAGGGTTTCCGGAAAAGGAAGAGACATAAAAATGCATTTTCAGTCCTTCGATCTCCTTGGAGACCAATACACACTCGAGGACCCTGTGCTTCTTTTGCCTGAGGTTAAATATCAAAAGCCGTATGTTGCAATTATCAAGGTTCTGTTTTGCCTCTATTTGTTTGCTGCTGTGTTGATGCCTTCTTGTTATTTTCAGTTTAGCAGTCCGGACATCACAATATCCCAAAATGGAAGCTTGATGATCACAGGGCAGTGGTTTTATCGTCCAGATGAAGCAGAAAAAAAGGGAGGTGGTAGCTGGAAATCGATTGACAACAGAGAGTTGTTTTATAGTTTCCACCAAGATGAAGTTCCTGCAGAATCTGTTATGCATAAATGTGTGGTGCATTTTGTTCCCATACACAAACAACTTCCAGATCGTAAGCAACATCCTGGGTTTATTGTGCAGAAAGTGTATGACACAAATGAATTGAAACTATGGAAGCTAACTGATAAGGACTATATGGGAAATAATCAACAAGAAATCGATGAGCTTGTTCAAAAAACTCGTCAATGTTTGGGTGAACTACCTGATATCGAGACCGATGAACCTGCTACCGATCAGGAAGTAACACTAGGGAATTGTGCAACTAATTCCTTTGAGCACCATCGCATATTAGTGAATTTTAAAGCGCTAACAGGAGATACCCATCGTGACAAGGGTTTGTCGATGTTGCTTCAAAATGTTCAATACTTGTTTGATACCGATGAGAGAAAAATTAAAAAAGACAAATGTGGTGACCGCTCTGATACTATCAACAATGAAGGCATTAACATTAGTTTAGGAATACCAAATGAATCTAAAGACAAAGTTCCGAAGAACTCCAAGTCTTTTGTCTGGCCCGATGTTGCTGTCCCAGTTGTAGTTTCTCTGGAGAAAGCTTTATACGATACATTTTCATCATATTATCAGAAGTACAAACAAAAGCTACGACAGTTGGTATTTAATCTCAAGAACAATTCATTTCTGTTACGCCGTTTATTAAATGGAGAGCTAGAACCTTCAAAAGTATTGAATATGACACCTACTGAATTGAAGGAGGGTTTGACTGCCGAGGAAATATCAAAGAATGAGCCCAATGAGCCACAACACATGCAGATGACAGATGCTCGATGTAAAATTTGCAACCAGCAAAAAGTTGGCGTGATGGATATTATCTGTGCAGGACATGCTAACCGATATATGCTTGATTGTGGCTCTACTTTTTCAGCTGGAATGCATCGCTTGTGGTTCTTCCTGAAGTTTGATGTTGGGAAGAAGCTAGCGAGTCCCCTTGAATCTTACAAGACCAATGACATCTTTATGCCGCCTATATTTGAAGCTCGTAAATCATTTGGCAAGTCGAAGAAAGATGAAAATAGCAAAGCTTCAGGGTGTTTGGTGTAA

Protein sequence

>Msa0953120

MKSSDEAEKEEDKELSSEEEDEELQVEEAKPIGEPVRVSGKGRDIKMHFQSFDLLGDQYTLEDPVLLLPEVKYQKPYVAIIKVLFCLYLFAAVLMPSCYFQFSSPDITISQNGSLMITGQWFYRPDEAEKKGGGSWKSIDNRELFYSFHQDEVPAESVMHKCVVHFVPIHKQLPDRKQHPGFIVQKVYDTNELKLWKLTDKDYMGNNQQEIDELVQKTRQCLGELPDIETDEPATDQEVTLGNCATNSFEHHRILVNFKALTGDTHRDKGLSMLLQNVQYLFDTDERKIKKDKCGDRSDTINNEGINISLGIPNESKDKVPKNSKSFVWPDVAVPVVVSLEKALYDTFSSYYQKYKQKLRQLVFNLKNNSFLLRRLLNGELEPSKVLNMTPTELKEGLTAEEISKNEPNEPQHMQMTDARCKICNQQKVGVMDIICAGHANRYMLDCGSTFSAGMHRLWFFLKFDVGKKLASPLESYKTNDIFMPPIFEARKSFGKSKKDENSKASGCLV*