Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279250 | XP_024633211.1 | 98.734 | 237 | 3 | 0 | 1 | 237 | 8 | 244 | 8.05e-173 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279250 | sp|O48916|FAH1_ARATH | 75.847 | 236 | 57 | 0 | 1 | 236 | 1 | 236 | 6.03e-134 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279250 | A0A072V5H1 | 98.734 | 237 | 3 | 0 | 1 | 237 | 13 | 249 | 5.38e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042980 | Msa0279250 | 0.851858 | 6.749885e-61 | -8.615850e-47 |
| Msa0063350 | Msa0279250 | 0.829255 | 5.700766e-55 | -8.615850e-47 |
| Msa0071550 | Msa0279250 | -0.808506 | 2.995488e-50 | -8.615850e-47 |
| Msa0071910 | Msa0279250 | 0.814320 | 1.636387e-51 | -8.615850e-47 |
| Msa0092990 | Msa0279250 | -0.811398 | 7.143850e-51 | -8.615850e-47 |
| Msa0108850 | Msa0279250 | -0.825846 | 3.751416e-54 | -8.615850e-47 |
| Msa0120340 | Msa0279250 | -0.805827 | 1.106232e-49 | -8.615850e-47 |
| Msa0134110 | Msa0279250 | 0.807905 | 4.022277e-50 | -8.615850e-47 |
| Msa0136890 | Msa0279250 | 0.818390 | 2.009752e-52 | -8.615850e-47 |
| Msa0140510 | Msa0279250 | 0.812672 | 3.768076e-51 | -8.615850e-47 |
| Msa0148120 | Msa0279250 | -0.807830 | 4.172085e-50 | -8.615850e-47 |
| Msa0151950 | Msa0279250 | -0.823442 | 1.382291e-53 | -8.615850e-47 |
| Msa0178860 | Msa0279250 | 0.834116 | 3.610486e-56 | -8.615850e-47 |
| Msa0191630 | Msa0279250 | -0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0196020 | Msa0279250 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
| Msa0223380 | Msa0279250 | -0.821758 | 3.405617e-53 | -8.615850e-47 |
| Msa0233610 | Msa0279250 | -0.821919 | 3.125249e-53 | -8.615850e-47 |
| Msa0241460 | Msa0279250 | 0.898667 | 4.239960e-77 | -8.615850e-47 |
| Msa0269450 | Msa0279250 | -0.817400 | 3.362937e-52 | -8.615850e-47 |
| Msa0279210 | Msa0279250 | 0.978177 | 2.772405e-145 | -8.615850e-47 |
| Msa0279250 | Msa0306210 | 0.826201 | 3.088785e-54 | -8.615850e-47 |
| Msa0279250 | Msa0318970 | 0.982409 | 5.108830e-155 | -8.615850e-47 |
| Msa0279250 | Msa0365490 | -0.818292 | 2.115105e-52 | -8.615850e-47 |
| Msa0279250 | Msa0381600 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
| Msa0279250 | Msa0388030 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
| Msa0279250 | Msa0389810 | -0.837619 | 4.672329e-57 | -8.615850e-47 |
| Msa0279250 | Msa0394340 | -0.815036 | 1.135484e-51 | -8.615850e-47 |
| Msa0279250 | Msa0444090 | -0.802413 | 5.676464e-49 | -8.615850e-47 |
| Msa0279250 | Msa0458440 | -0.800131 | 1.663939e-48 | -8.615850e-47 |
| Msa0279250 | Msa0464900 | -0.814541 | 1.461739e-51 | -8.615850e-47 |
| Msa0279250 | Msa0465670 | 0.815279 | 1.002750e-51 | -8.615850e-47 |
| Msa0279250 | Msa0465680 | 0.831985 | 1.223830e-55 | -8.615850e-47 |
| Msa0279250 | Msa0468130 | -0.832440 | 9.440038e-56 | -8.615850e-47 |
| Msa0279250 | Msa0482190 | 0.827930 | 1.191424e-54 | -8.615850e-47 |
| Msa0279250 | Msa0485500 | 0.826626 | 2.447180e-54 | -8.615850e-47 |
| Msa0279250 | Msa0491500 | -0.814295 | 1.657348e-51 | -8.615850e-47 |
| Msa0279250 | Msa0491520 | -0.833797 | 4.338832e-56 | -8.615850e-47 |
| Msa0279250 | Msa0521620 | -0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0279250 | Msa0526670 | 0.806312 | 8.745055e-50 | -8.615850e-47 |
| Msa0279250 | Msa0553220 | 0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa0279250 | Msa0561130 | 0.815583 | 8.583522e-52 | -8.615850e-47 |
| Msa0279250 | Msa0581920 | -0.809564 | 1.777633e-50 | -8.615850e-47 |
| Msa0279250 | Msa0599580 | -0.802333 | 5.895807e-49 | -8.615850e-47 |
| Msa0279250 | Msa0616540 | -0.814021 | 1.904279e-51 | -8.615850e-47 |
| Msa0279250 | Msa0657460 | 0.809055 | 2.285962e-50 | -8.615850e-47 |
| Msa0279250 | Msa0662650 | -0.811022 | 8.616611e-51 | -8.615850e-47 |
| Msa0279250 | Msa0708860 | -0.814172 | 1.763739e-51 | -8.615850e-47 |
| Msa0279250 | Msa0733740 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa0279250 | Msa0827470 | -0.800211 | 1.602798e-48 | -8.615850e-47 |
| Msa0279250 | Msa0862800 | 0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0279250 | Msa0864470 | 0.847905 | 8.601472e-60 | -8.615850e-47 |
| Msa0279250 | Msa0866010 | 0.802052 | 6.734937e-49 | -8.615850e-47 |
| Msa0279250 | Msa0926800 | -0.815178 | 1.056000e-51 | -8.615850e-47 |
| Msa0279250 | Msa0942550 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa0279250 | Msa0942560 | 0.817694 | 2.887913e-52 | -8.615850e-47 |
| Msa0279250 | Msa0946690 | 0.817693 | 2.888471e-52 | -8.615850e-47 |
| Msa0279250 | Msa0965520 | -0.828647 | 8.003055e-55 | -8.615850e-47 |
| Msa0279250 | Msa0972090 | 0.801083 | 1.064551e-48 | -8.615850e-47 |
| Msa0279250 | Msa0982270 | -0.840634 | 7.727093e-58 | -8.615850e-47 |
| Msa0279250 | Msa0999270 | 0.827131 | 1.853449e-54 | -8.615850e-47 |
| Msa0279250 | Msa0999960 | 0.806439 | 8.221440e-50 | -8.615850e-47 |
| Msa0279250 | Msa1021340 | -0.807359 | 5.254482e-50 | -8.615850e-47 |
| Msa0279250 | Msa1029080 | 0.816178 | 6.320766e-52 | -8.615850e-47 |
| Msa0279250 | Msa1039880 | -0.823342 | 1.458322e-53 | -8.615850e-47 |
| Msa0279250 | Msa1072530 | 0.813953 | 1.971451e-51 | -8.615850e-47 |
| Msa0279250 | Msa1073070 | 0.807900 | 4.032213e-50 | -8.615850e-47 |
| Msa0279250 | Msa1079730 | 0.817087 | 3.955538e-52 | -8.615850e-47 |
| Msa0279250 | Msa1124540 | 0.833087 | 6.523670e-56 | -8.615850e-47 |
| Msa0279250 | Msa1132560 | 0.802145 | 6.445126e-49 | -8.615850e-47 |
| Msa0279250 | Msa1143930 | 0.807303 | 5.398739e-50 | -8.615850e-47 |
| Msa0279250 | Msa1148750 | -0.804206 | 2.414194e-49 | -8.615850e-47 |
| Msa0279250 | Msa1156170 | 0.810933 | 9.009582e-51 | -8.615850e-47 |
| Msa0279250 | Msa1168040 | 0.829152 | 6.039285e-55 | -8.615850e-47 |
| Msa0279250 | Msa1184150 | 0.819787 | 9.668505e-53 | -8.615850e-47 |
| Msa0279250 | Msa1207460 | 0.863013 | 3.370594e-64 | -8.615850e-47 |
| Msa0279250 | Msa1214880 | -0.812170 | 4.851830e-51 | -8.615850e-47 |
| Msa0279250 | Msa1217430 | 0.814803 | 1.278959e-51 | -8.615850e-47 |
| Msa0279250 | Msa1224580 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0279250 | Msa1228160 | 0.870355 | 1.553290e-66 | -8.615850e-47 |
| Msa0279250 | Msa1229850 | -0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0279250 | Msa1236070 | 0.824521 | 7.716050e-54 | -8.615850e-47 |
| Msa0279250 | Msa1257640 | 0.825808 | 3.829688e-54 | -8.615850e-47 |
| Msa0279250 | Msa1258380 | 0.827356 | 1.636749e-54 | -8.615850e-47 |
| Msa0279250 | Msa1262990 | 0.801677 | 8.044379e-49 | -8.615850e-47 |
| Msa0279250 | Msa1271170 | 0.835292 | 1.826746e-56 | -8.615850e-47 |
| Msa0279250 | Msa1300860 | -0.802876 | 4.556021e-49 | -8.615850e-47 |
| Msa0279250 | Msa1302190 | 0.815610 | 8.462428e-52 | -8.615850e-47 |
| Msa0279250 | Msa1304840 | -0.802837 | 4.641083e-49 | -8.615850e-47 |
| Msa0279250 | Msa1307740 | -0.829530 | 4.888477e-55 | -8.615850e-47 |
| Msa0279250 | Msa1308330 | 0.879188 | 1.527976e-69 | -8.615850e-47 |
| Msa0279250 | Msa1322190 | -0.827645 | 1.395172e-54 | -8.615850e-47 |
| Msa0279250 | Msa1331920 | -0.802498 | 5.451943e-49 | -8.615850e-47 |
| Msa0279250 | Msa1364330 | 0.842647 | 2.275505e-58 | -8.615850e-47 |
| Msa0279250 | Msa1387590 | -0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0279250 | Msa1404240 | 0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0279250 | Msa1417810 | 0.807903 | 4.027242e-50 | -8.615850e-47 |
| Msa0279250 | Msa1417830 | 0.825244 | 5.209934e-54 | -8.615850e-47 |
| Msa0279250 | Msa1444250 | 0.839564 | 1.469408e-57 | -8.615850e-47 |
| Msa0279250 | Msa1445400 | 0.808555 | 2.924030e-50 | -8.615850e-47 |
| Msa0279250 | Msa1445420 | 0.821865 | 3.216792e-53 | -8.615850e-47 |
| Msa0279250 | Msa1449350 | 0.805330 | 1.406625e-49 | -8.615850e-47 |
| Msa0279250 | Msa1451620 | 0.831665 | 1.467791e-55 | -8.615850e-47 |
| Msa0279250 | Msa1459760 | 0.817311 | 3.522473e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279250 | MtrunA17_Chr2g0292941 | 98.734 | 237 | 3 | 0 | 1 | 237 | 1 | 237 | 1.76e-176 | 484 |
| Msa0279250 | MtrunA17_Chr4g0051591 | 69.068 | 236 | 72 | 1 | 1 | 235 | 1 | 236 | 1.41e-114 | 327 |
| Msa0279250 | MtrunA17_Chr4g0051581 | 69.128 | 149 | 46 | 0 | 1 | 149 | 1 | 149 | 3.41e-67 | 205 |
| Msa0279250 | MtrunA17_Chr4g0051571 | 64.130 | 92 | 32 | 1 | 145 | 235 | 4 | 95 | 2.47e-37 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279250 | AT2G34770.1 | 75.847 | 236 | 57 | 0 | 1 | 236 | 1 | 236 | 6.13e-135 | 379 |
| Msa0279250 | AT4G20870.2 | 71.610 | 236 | 67 | 0 | 1 | 236 | 1 | 236 | 2.39e-126 | 357 |
| Msa0279250 | AT4G20870.1 | 71.610 | 236 | 67 | 0 | 1 | 236 | 1 | 236 | 2.39e-126 | 357 |
Find 111 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTGGCGGTGGCTTAC+TGG | 0.121516 | 2_3:-12865967 | Msa0279250:CDS |
| TCAACTACTCCTGCTTTATT+TGG | 0.215512 | 2_3:-12865981 | Msa0279250:CDS |
| AAGCATGTAAATTTACTGTT+AGG | 0.251857 | 2_3:-12865340 | Msa0279250:exon |
| AGGATCCAAGATAAAGGATT+TGG | 0.271287 | 2_3:-12865426 | Msa0279250:CDS |
| TTTCGGGGATGTTCAGTCTT+TGG | 0.281707 | 2_3:+12865897 | None:intergenic |
| GGTGGGCAATACCAGTTATT+TGG | 0.282521 | 2_3:-12867606 | Msa0279250:CDS |
| GTGAGAGTGAACGTAGAAAA+AGG | 0.296070 | 2_3:+12869709 | None:intergenic |
| TGGGATCACTTCCTCACTTT+GGG | 0.329323 | 2_3:-12865406 | Msa0279250:CDS |
| CTTTACAATGTGTTCACAAT+TGG | 0.330838 | 2_3:+12865177 | None:intergenic |
| GACCATGGTGCAAGTAATAA+TGG | 0.337316 | 2_3:+12865922 | None:intergenic |
| GCTCCACAATTGATGTTTGC+GGG | 0.354380 | 2_3:-12865243 | Msa0279250:three_prime_UTR |
| CACTTTAGGATCCAAGATAA+AGG | 0.360540 | 2_3:-12865432 | Msa0279250:CDS |
| AACAGCTATATTATTGTTCC+CGG | 0.368539 | 2_3:-12866988 | Msa0279250:intron |
| GTTCTATAGGTTGGACATCT+TGG | 0.372108 | 2_3:-12868322 | Msa0279250:intron |
| ACCACTTGAACCATCACTTT+AGG | 0.374306 | 2_3:-12865446 | Msa0279250:CDS |
| TGATCCCAAATCCTTTATCT+TGG | 0.378096 | 2_3:+12865421 | None:intergenic |
| ATAGCTCTGATGGTGGTTCT+TGG | 0.379060 | 2_3:-12867523 | Msa0279250:CDS |
| TGTATATAACTCTATACAAA+TGG | 0.396707 | 2_3:-12867563 | Msa0279250:CDS |
| GAAGTAAAATCACAGCAAAA+AGG | 0.398929 | 2_3:+12865116 | None:intergenic |
| GGATCCAAGATAAAGGATTT+GGG | 0.400632 | 2_3:-12865425 | Msa0279250:CDS |
| AGCATGTAAATTTACTGTTA+GGG | 0.401645 | 2_3:-12865339 | Msa0279250:exon |
| TTGGGATCACTTCCTCACTT+TGG | 0.406513 | 2_3:-12865407 | Msa0279250:CDS |
| ACAACTGGAAGCCAAATAAC+TGG | 0.431941 | 2_3:+12867595 | None:intergenic |
| TATACAAACCAACATACAAC+TGG | 0.433560 | 2_3:+12867580 | None:intergenic |
| TTATTTGGCGGTGGCTTACT+GGG | 0.435203 | 2_3:-12865966 | Msa0279250:CDS |
| TGCTCCACAATTGATGTTTG+CGG | 0.448035 | 2_3:-12865244 | Msa0279250:three_prime_UTR |
| AACCATCCATGGGGTGTTTG+TGG | 0.448233 | 2_3:+12867036 | None:intergenic |
| GGGGTATAAGAGAGATGATC+TGG | 0.448716 | 2_3:+12869782 | None:intergenic |
| ACTACTCCTGCTTTATTTGG+CGG | 0.450026 | 2_3:-12865978 | Msa0279250:CDS |
| TCCCCGTTTCTTTCAAAATG+AGG | 0.458220 | 2_3:-12868251 | Msa0279250:CDS |
| AGTCCTTGACCCTCACTGTC+TGG | 0.464818 | 2_3:-12867627 | Msa0279250:CDS |
| AGAGAATAAACTCTTCAAGA+TGG | 0.465942 | 2_3:+12869818 | None:intergenic |
| AAAGTCCTGGGCAACCATCT+TGG | 0.468070 | 2_3:+12868549 | None:intergenic |
| GTGGTTCTCGCTGCCGTGCA+CGG | 0.472594 | 2_3:-12869664 | Msa0279250:five_prime_UTR |
| TCAAATCAACTACAAAGTCC+TGG | 0.474615 | 2_3:+12868536 | None:intergenic |
| CGTTGACAGACTGGCTGCAT+GGG | 0.475217 | 2_3:+12869849 | None:intergenic |
| GGACCTTCCTTGCTAACAAT+GGG | 0.475219 | 2_3:+12868271 | None:intergenic |
| GAATCTAGCCGTTGACAGAC+TGG | 0.475725 | 2_3:+12869840 | None:intergenic |
| TTTGGCTTCCAGTTGTATGT+TGG | 0.477885 | 2_3:-12867588 | Msa0279250:CDS |
| AATGCAGGTGGAATCGAAAT+CGG | 0.483105 | 2_3:+12869623 | None:intergenic |
| AGAATATGTTACCAGGTTTG+TGG | 0.483297 | 2_3:-12865153 | Msa0279250:three_prime_UTR |
| AACAAGTCTCAAACCATCCA+TGG | 0.483587 | 2_3:+12867025 | None:intergenic |
| CCGTTGACAGACTGGCTGCA+TGG | 0.483782 | 2_3:+12869848 | None:intergenic |
| CTGTCCTCATATAGCTCTGA+TGG | 0.487299 | 2_3:-12867533 | Msa0279250:CDS |
| ACATTAAAACAAAGACCTAC+TGG | 0.502397 | 2_3:-12867450 | Msa0279250:intron |
| CAGCCCATTGTTAGCAAGGA+AGG | 0.502882 | 2_3:-12868274 | Msa0279250:CDS |
| CCTTGACCCTCACTGTCTGG+TGG | 0.505883 | 2_3:-12867624 | Msa0279250:CDS |
| CAGCACCAAGATGGTTGCCC+AGG | 0.518070 | 2_3:-12868554 | Msa0279250:exon |
| AAGCCTGTACCTGGAAAACA+AGG | 0.518297 | 2_3:+12868506 | None:intergenic |
| AATATAGCTGTTGCAGTAGG+AGG | 0.519735 | 2_3:+12866999 | None:intergenic |
| GGGACCTTCCTTGCTAACAA+TGG | 0.525396 | 2_3:+12868270 | None:intergenic |
| GTATATAACTCTATACAAAT+GGG | 0.525508 | 2_3:-12867562 | Msa0279250:CDS |
| GCCATGTAGAAGATAATGTA+TGG | 0.525715 | 2_3:+12867064 | None:intergenic |
| AGCAGGAGTAGTTGAAGGGG+TGG | 0.532131 | 2_3:+12865989 | None:intergenic |
| ACCATGGTGCAAGTAATAAT+GGG | 0.532977 | 2_3:+12865923 | None:intergenic |
| ACTCCTGCTTTATTTGGCGG+TGG | 0.533512 | 2_3:-12865975 | Msa0279250:CDS |
| TATCTTGGATCCTAAAGTGA+TGG | 0.534098 | 2_3:+12865436 | None:intergenic |
| CTGTTAGGGATAGCATATGT+TGG | 0.535455 | 2_3:-12865325 | Msa0279250:three_prime_UTR |
| TAGGGATAGCATATGTTGGT+TGG | 0.535897 | 2_3:-12865321 | Msa0279250:three_prime_UTR |
| GTGATGAGGCAATGATTTAG+TGG | 0.536110 | 2_3:+12869761 | None:intergenic |
| AATAATTAGACAGATAAAAG+AGG | 0.536195 | 2_3:+12865272 | None:intergenic |
| CTTGACCCTCACTGTCTGGT+GGG | 0.548253 | 2_3:-12867623 | Msa0279250:CDS |
| AATAAAGCAGGAGTAGTTGA+AGG | 0.548583 | 2_3:+12865984 | None:intergenic |
| CAAATCAACTACAAAGTCCT+GGG | 0.550444 | 2_3:+12868537 | None:intergenic |
| TTTGGCGTTCAGCACCAAGA+TGG | 0.551359 | 2_3:-12868563 | Msa0279250:intron |
| GTTTATTCTCTTAAATCGAA+CGG | 0.555588 | 2_3:-12869806 | Msa0279250:five_prime_UTR |
| CTTTCAAAATGAGGTTCTAG+AGG | 0.555614 | 2_3:-12868242 | Msa0279250:intron |
| TTGGTGAAGCTTATGAAGAG+TGG | 0.555652 | 2_3:-12868303 | Msa0279250:CDS |
| AAGCCACCGCCAAATAAAGC+AGG | 0.556526 | 2_3:+12865972 | None:intergenic |
| GGCGCAGTTCTCATCGCTCA+CGG | 0.565898 | 2_3:-12869686 | Msa0279250:five_prime_UTR |
| AACACTTCCTTCCTCAAAAG+CGG | 0.566327 | 2_3:-12865370 | Msa0279250:CDS |
| TCATCAGCCCATTGTTAGCA+AGG | 0.566774 | 2_3:-12868278 | Msa0279250:CDS |
| GTTCAGTCTTTGGCTGACCA+TGG | 0.566911 | 2_3:+12865907 | None:intergenic |
| TGGTGAAGCTTATGAAGAGT+GGG | 0.567564 | 2_3:-12868302 | Msa0279250:CDS |
| ACAAGTCTCAAACCATCCAT+GGG | 0.570404 | 2_3:+12867026 | None:intergenic |
| TCCTAAAGTGATGGTTCAAG+TGG | 0.570815 | 2_3:+12865445 | None:intergenic |
| CACCACAAACACCCCATGGA+TGG | 0.571556 | 2_3:-12867038 | Msa0279250:CDS |
| ATACATTTCCACCACAAACC+TGG | 0.572413 | 2_3:+12865142 | None:intergenic |
| ACCACCATCAGAGCTATATG+AGG | 0.581427 | 2_3:+12867529 | None:intergenic |
| ATATGTTACCAGGTTTGTGG+TGG | 0.583806 | 2_3:-12865150 | Msa0279250:three_prime_UTR |
| CCATGCAGCCAGTCTGTCAA+CGG | 0.584957 | 2_3:-12869848 | Msa0279250:five_prime_UTR |
| TGATGAGGCAATGATTTAGT+GGG | 0.590628 | 2_3:+12869762 | None:intergenic |
| GATCGAAGAAGCGCCGTGCA+CGG | 0.594362 | 2_3:+12869651 | None:intergenic |
| GTAAAGTAGAATATGTTACC+AGG | 0.594688 | 2_3:-12865160 | Msa0279250:three_prime_UTR |
| CTCCACAATTGATGTTTGCG+GGG | 0.596265 | 2_3:-12865242 | Msa0279250:three_prime_UTR |
| AATAATATAGCTGTTGCAGT+AGG | 0.598883 | 2_3:+12866996 | None:intergenic |
| CTGCCACCACAAACACCCCA+TGG | 0.603098 | 2_3:-12867042 | Msa0279250:CDS |
| ATATAGCTGTTGCAGTAGGA+GGG | 0.606939 | 2_3:+12867000 | None:intergenic |
| GTTGACAGACTGGCTGCATG+GGG | 0.610822 | 2_3:+12869850 | None:intergenic |
| CAGTAAGAAGAAAACAATGC+AGG | 0.613263 | 2_3:+12869608 | None:intergenic |
| ATAAAGCAGGAGTAGTTGAA+GGG | 0.615938 | 2_3:+12865985 | None:intergenic |
| GATGAGGCAATGATTTAGTG+GGG | 0.616982 | 2_3:+12869763 | None:intergenic |
| TAAGAAGAAAACAATGCAGG+TGG | 0.617945 | 2_3:+12869611 | None:intergenic |
| ACCATACATTATCTTCTACA+TGG | 0.618370 | 2_3:-12867065 | Msa0279250:CDS |
| AACCCCGCAAACATCAATTG+TGG | 0.619268 | 2_3:+12865240 | None:intergenic |
| GCCTGTACCTGGAAAACAAG+GGG | 0.619950 | 2_3:+12868508 | None:intergenic |
| ACCCATTATTACTTGCACCA+TGG | 0.623569 | 2_3:-12865924 | Msa0279250:CDS |
| TGAACATCCCCGAAACCTGA+AGG | 0.626671 | 2_3:-12865889 | Msa0279250:intron |
| CATCCATGGGGTGTTTGTGG+TGG | 0.632413 | 2_3:+12867039 | None:intergenic |
| CGGACTCCAGTTCTGGAACG+TGG | 0.633072 | 2_3:-12866024 | Msa0279250:intron |
| TCCTCATATAGCTCTGATGG+TGG | 0.637299 | 2_3:-12867530 | Msa0279250:CDS |
| CCACCAGACAGTGAGGGTCA+AGG | 0.641225 | 2_3:+12867624 | None:intergenic |
| GCGTGTTGTGTTGAGTGATG+AGG | 0.662809 | 2_3:+12869747 | None:intergenic |
| GAGCTATATGAGGACAGCTG+AGG | 0.663833 | 2_3:+12867539 | None:intergenic |
| TATTGCCCACCAGACAGTGA+GGG | 0.672832 | 2_3:+12867618 | None:intergenic |
| TAAAGCAGGAGTAGTTGAAG+GGG | 0.675171 | 2_3:+12865986 | None:intergenic |
| GTATTGCCCACCAGACAGTG+AGG | 0.692936 | 2_3:+12867617 | None:intergenic |
| TTGACAGACTGGCTGCATGG+GGG | 0.698205 | 2_3:+12869851 | None:intergenic |
| AGCCTGTACCTGGAAAACAA+GGG | 0.717048 | 2_3:+12868507 | None:intergenic |
| CAAGTCTCAAACCATCCATG+GGG | 0.739606 | 2_3:+12867027 | None:intergenic |
| GCAGTTCTCATCGCTCACGG+TGG | 0.758042 | 2_3:-12869683 | Msa0279250:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAATATATAATT+GGG | + | chr2_3:12866123-12866142 | None:intergenic | 0.0% |
| !! | TTTAAAAAAAAATATATAAT+TGG | + | chr2_3:12866124-12866143 | None:intergenic | 0.0% |
| !!! | CATAATTTTTTTTTTTGTTT+TGG | - | chr2_3:12865951-12865970 | Msa0279250:CDS | 10.0% |
| !!! | TTAATTTTATGTGTAAATTT+AGG | - | chr2_3:12866533-12866552 | Msa0279250:intron | 10.0% |
| !!! | TTTATAAAAAAACAAGTTTT+TGG | - | chr2_3:12866839-12866858 | Msa0279250:intron | 10.0% |
| !! | AAATTGAACAAATTTAAAAA+AGG | + | chr2_3:12868289-12868308 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTTGTTCAATT+TGG | - | chr2_3:12868288-12868307 | Msa0279250:CDS | 10.0% |
| !! | CTTCAAATAATAATAATTTA+AGG | - | chr2_3:12868628-12868647 | Msa0279250:intron | 10.0% |
| !! | TAAGTACTAATAATCTAATT+GGG | + | chr2_3:12866150-12866169 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTAATGTTCTAT+AGG | - | chr2_3:12866612-12866631 | Msa0279250:intron | 15.0% |
| !!! | TTTTCTAGTTATATAACTTT+TGG | - | chr2_3:12867130-12867149 | Msa0279250:intron | 15.0% |
| !!! | TTTCTAGTTATATAACTTTT+GGG | - | chr2_3:12867131-12867150 | Msa0279250:intron | 15.0% |
| !! | TAATGTGGTTAATTATTAAA+AGG | + | chr2_3:12867221-12867240 | None:intergenic | 15.0% |
| !!! | CAATAAAGTATTTGAAAATT+CGG | + | chr2_3:12868010-12868029 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTATTATGACAAA+TGG | - | chr2_3:12868394-12868413 | Msa0279250:intron | 15.0% |
| !!! | CAAATTATGTTTTTAAACAA+TGG | + | chr2_3:12868470-12868489 | None:intergenic | 15.0% |
| !! | CATTGTTTAAAAACATAATT+TGG | - | chr2_3:12868468-12868487 | Msa0279250:intron | 15.0% |
| !!! | TATTTGTTTTTAAAGTTGAA+TGG | - | chr2_3:12868535-12868554 | Msa0279250:CDS | 15.0% |
| !!! | AATTTGTATTTAATTTCATG+TGG | - | chr2_3:12868592-12868611 | Msa0279250:intron | 15.0% |
| !!! | ATTTGTATTTAATTTCATGT+GGG | - | chr2_3:12868593-12868612 | Msa0279250:intron | 15.0% |
| !! | AATATAAATAAGATACGTAA+TGG | - | chr2_3:12869323-12869342 | Msa0279250:intron | 15.0% |
| !!! | TATTTTTTTTAGGATTGTGA+AGG | - | chr2_3:12865657-12865676 | Msa0279250:intron | 20.0% |
| !!! | GACAGAAGAAATTTTAATTT+GGG | - | chr2_3:12865877-12865896 | Msa0279250:intron | 20.0% |
| !! | GACAGTATATAATATATACA+GGG | + | chr2_3:12866050-12866069 | None:intergenic | 20.0% |
| !! | CTAAGTACTAATAATCTAAT+TGG | + | chr2_3:12866151-12866170 | None:intergenic | 20.0% |
| !! | TATGAAGAACAAAATATGTT+AGG | + | chr2_3:12866280-12866299 | None:intergenic | 20.0% |
| !! | CAATTCAATGATAAAAACAA+TGG | + | chr2_3:12866334-12866353 | None:intergenic | 20.0% |
| !!! | CATTGTTTTTATCATTGAAT+TGG | - | chr2_3:12866332-12866351 | Msa0279250:intron | 20.0% |
| !!! | GTGATTAACACTTTTATTTT+TGG | - | chr2_3:12866366-12866385 | Msa0279250:intron | 20.0% |
| !!! | TTTTTGAAAGAGGATTTTTA+CGG | + | chr2_3:12866470-12866489 | None:intergenic | 20.0% |
| !!! | TACATAACATTTGAAATCTA+AGG | + | chr2_3:12866508-12866527 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGTTCTATAGGT+TGG | - | chr2_3:12866616-12866635 | Msa0279250:intron | 20.0% |
| !!! | AGATAGCGAAATAATTTTTT+CGG | + | chr2_3:12866931-12866950 | None:intergenic | 20.0% |
| !! | TGTATATAACTCTATACAAA+TGG | - | chr2_3:12867384-12867403 | Msa0279250:intron | 20.0% |
| !! | GTATATAACTCTATACAAAT+GGG | - | chr2_3:12867385-12867404 | Msa0279250:intron | 20.0% |
| !!! | TTTTAATGTGGAAAAGAAAA+CGG | + | chr2_3:12867486-12867505 | None:intergenic | 20.0% |
| !!! | TAAGTTGATTTAAGAAATGT+TGG | - | chr2_3:12867566-12867585 | Msa0279250:CDS | 20.0% |
| !!! | CATGTATTTTATTACGATAA+TGG | + | chr2_3:12867613-12867632 | None:intergenic | 20.0% |
| !!! | CGAATTTTCAAATACTTTAT+TGG | - | chr2_3:12868008-12868027 | Msa0279250:intron | 20.0% |
| !!! | TTTTTATCATGAATTCTTCT+TGG | - | chr2_3:12868058-12868077 | Msa0279250:intron | 20.0% |
| !! | AAAAAAACTAATTACTCTGT+TGG | + | chr2_3:12868101-12868120 | None:intergenic | 20.0% |
| !!! | ATTTGATGAAAATTTGTTGT+AGG | + | chr2_3:12868348-12868367 | None:intergenic | 20.0% |
| !! | ACTTAAATAGTAAGATTAGA+TGG | - | chr2_3:12868419-12868438 | Msa0279250:intron | 20.0% |
| !! | GTTTAAAAACATAATTTGGA+AGG | - | chr2_3:12868472-12868491 | Msa0279250:intron | 20.0% |
| !!! | CAACTTTAAAAACAAATATC+CGG | + | chr2_3:12868533-12868552 | None:intergenic | 20.0% |
| !!! | ATTTTATAACCTTCTTTGAT+AGG | - | chr2_3:12868653-12868672 | Msa0279250:intron | 20.0% |
| !!! | AACAAATAAATTGTTGTTTC+TGG | - | chr2_3:12868687-12868706 | Msa0279250:intron | 20.0% |
| !! | ATATTGACATATCTATATTG+AGG | + | chr2_3:12868831-12868850 | None:intergenic | 20.0% |
| !! | CAATATAGATATGTCAATAT+TGG | - | chr2_3:12868831-12868850 | Msa0279250:intron | 20.0% |
| !! | TCCAATAAAAATCAATGAAA+AGG | - | chr2_3:12869170-12869189 | Msa0279250:intron | 20.0% |
| !!! | TCCTTTTCATTGATTTTTAT+TGG | + | chr2_3:12869174-12869193 | None:intergenic | 20.0% |
| !!! | CTTCTATCACTTTATTTATT+TGG | - | chr2_3:12869394-12869413 | Msa0279250:intron | 20.0% |
| !!! | TTTATTTATTTGGTACCTTT+TGG | - | chr2_3:12869404-12869423 | Msa0279250:intron | 20.0% |
| !! | AATAATTAGACAGATAAAAG+AGG | + | chr2_3:12869678-12869697 | None:intergenic | 20.0% |
| ! | GTTTATTCTCTTAAATCGAA+CGG | - | chr2_3:12865141-12865160 | Msa0279250:three_prime_UTR | 25.0% |
| !! | ATTGTTTTCTTCTTACTGTT+CGG | - | chr2_3:12865344-12865363 | Msa0279250:exon | 25.0% |
| ! | ACGAAACAAAAATCGAAATT+AGG | + | chr2_3:12865457-12865476 | None:intergenic | 25.0% |
| !!! | TTTTGATGTATTTTTTGCAC+TGG | - | chr2_3:12865714-12865733 | Msa0279250:intron | 25.0% |
| !!! | GGACAGAAGAAATTTTAATT+TGG | - | chr2_3:12865876-12865895 | Msa0279250:intron | 25.0% |
| !! | ACATTTTAAATGTAGAGAAG+TGG | - | chr2_3:12866001-12866020 | Msa0279250:CDS | 25.0% |
| !! | CATTTTAAATGTAGAGAAGT+GGG | - | chr2_3:12866002-12866021 | Msa0279250:CDS | 25.0% |
| ! | TATATAATATATACAGGGCT+GGG | + | chr2_3:12866045-12866064 | None:intergenic | 25.0% |
| ! | GGACAGTATATAATATATAC+AGG | + | chr2_3:12866051-12866070 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGAGGATTTTTAC+GGG | + | chr2_3:12866469-12866488 | None:intergenic | 25.0% |
| ! | ATAAATCCAATATCGTTAAC+TGG | + | chr2_3:12866824-12866843 | None:intergenic | 25.0% |
| ! | CACATGAACAATATAAGATT+AGG | + | chr2_3:12867082-12867101 | None:intergenic | 25.0% |
| !!! | GTTATATAACTTTTGGGTAA+AGG | - | chr2_3:12867137-12867156 | Msa0279250:intron | 25.0% |
| ! | TATCGTAATAAAATACATGC+CGG | - | chr2_3:12867614-12867633 | Msa0279250:CDS | 25.0% |
| ! | TGTCTCACTATATAAAAAGT+GGG | - | chr2_3:12867656-12867675 | Msa0279250:intron | 25.0% |
| !!! | CATTTAACCAAAAAGCATTA+CGG | + | chr2_3:12867846-12867865 | None:intergenic | 25.0% |
| !!! | TTTTGGTTAAATGTTGCTTT+AGG | - | chr2_3:12867853-12867872 | Msa0279250:intron | 25.0% |
| !!! | TTTGGTTAAATGTTGCTTTA+GGG | - | chr2_3:12867854-12867873 | Msa0279250:intron | 25.0% |
| ! | ATATGGCAAAAAATAGATAC+CGG | + | chr2_3:12867981-12868000 | None:intergenic | 25.0% |
| ! | TGAAAATTCGGCATATAATA+TGG | + | chr2_3:12867998-12868017 | None:intergenic | 25.0% |
| ! | GAAAAAAAATTGAACCTGAT+TGG | + | chr2_3:12868326-12868345 | None:intergenic | 25.0% |
| ! | TTCATCAAATTACTCCTTTA+AGG | - | chr2_3:12868358-12868377 | Msa0279250:intron | 25.0% |
| ! | AAAGTTGAATGGTATAAGAA+TGG | - | chr2_3:12868546-12868565 | Msa0279250:CDS | 25.0% |
| ! | AAAATTCCATGAAGTAATGT+TGG | - | chr2_3:12868886-12868905 | Msa0279250:intron | 25.0% |
| !! | GATTTTGCTTAGCAAAATAT+TGG | + | chr2_3:12869143-12869162 | None:intergenic | 25.0% |
| ! | TCTACTGAAATTGTAATAAC+TGG | + | chr2_3:12869218-12869237 | None:intergenic | 25.0% |
| ! | ACAATTTCAGTAGAAATTGA+AGG | - | chr2_3:12869224-12869243 | Msa0279250:intron | 25.0% |
| ! | TTGAAGACAAAGTTAAAAGA+AGG | + | chr2_3:12869305-12869324 | None:intergenic | 25.0% |
| ! | AAGCATGTAAATTTACTGTT+AGG | - | chr2_3:12869607-12869626 | Msa0279250:five_prime_UTR | 25.0% |
| ! | AGCATGTAAATTTACTGTTA+GGG | - | chr2_3:12869608-12869627 | Msa0279250:five_prime_UTR | 25.0% |
| ! | ACCAAAAAATTGACGAAAAA+TGG | + | chr2_3:12869739-12869758 | None:intergenic | 25.0% |
| AGAGAATAAACTCTTCAAGA+TGG | + | chr2_3:12865132-12865151 | None:intergenic | 30.0% | |
| GCAAAATCGGATCTAAAAAT+CGG | + | chr2_3:12865391-12865410 | None:intergenic | 30.0% | |
| TGCTGAAACAAAAGCAAAAT+CGG | + | chr2_3:12865404-12865423 | None:intergenic | 30.0% | |
| TAGTAAGATGAAAACGACTA+TGG | - | chr2_3:12865818-12865837 | Msa0279250:intron | 30.0% | |
| !!! | AAAACGACTATGGTCTTTTT+TGG | - | chr2_3:12865828-12865847 | Msa0279250:intron | 30.0% |
| !! | TGTAAGGGTGTTTATTAGAT+GGG | - | chr2_3:12865855-12865874 | Msa0279250:intron | 30.0% |
| ATATAATATATACAGGGCTG+GGG | + | chr2_3:12866044-12866063 | None:intergenic | 30.0% | |
| GTATATAATATATACAGGGC+TGG | + | chr2_3:12866046-12866065 | None:intergenic | 30.0% | |
| AAAAACAATGGCAACAGTAA+TGG | + | chr2_3:12866322-12866341 | None:intergenic | 30.0% | |
| !! | CATGGAGAAATTTTTGAAAG+AGG | + | chr2_3:12866480-12866499 | None:intergenic | 30.0% |
| TTGAAATCTAAGGAATGACA+TGG | + | chr2_3:12866498-12866517 | None:intergenic | 30.0% | |
| !! | AACCTCATTTTGAAAGAAAC+GGG | + | chr2_3:12866701-12866720 | None:intergenic | 30.0% |
| !! | GAACCTCATTTTGAAAGAAA+CGG | + | chr2_3:12866702-12866721 | None:intergenic | 30.0% |
| ! | TGGTAAAAATGTTTAGAGCA+AGG | - | chr2_3:12866859-12866878 | Msa0279250:intron | 30.0% |
| !!! | TAATTTTTTCGGAGGAACTA+CGG | + | chr2_3:12866920-12866939 | None:intergenic | 30.0% |
| !!! | TAGCGAAATAATTTTTTCGG+AGG | + | chr2_3:12866928-12866947 | None:intergenic | 30.0% |
| !!! | CACATGTCTACTTTTTATCA+GGG | - | chr2_3:12866953-12866972 | Msa0279250:intron | 30.0% |
| AGTTTCATCATGTGAGAAAA+AGG | + | chr2_3:12866990-12867009 | None:intergenic | 30.0% | |
| AGATTAGGAGTGATTATTCA+GGG | + | chr2_3:12867067-12867086 | None:intergenic | 30.0% | |
| AAGATTAGGAGTGATTATTC+AGG | + | chr2_3:12867068-12867087 | None:intergenic | 30.0% | |
| !! | AGGTTTCCTTTGATTTTGAT+TGG | - | chr2_3:12867157-12867176 | Msa0279250:intron | 30.0% |
| AACATGCCAATCAAAATCAA+AGG | + | chr2_3:12867166-12867185 | None:intergenic | 30.0% | |
| ATCTTCATTTGCTTGTAATG+TGG | + | chr2_3:12867236-12867255 | None:intergenic | 30.0% | |
| TATACAAACCAACATACAAC+TGG | + | chr2_3:12867370-12867389 | None:intergenic | 30.0% | |
| !!! | AGTAGGTCTTTGTTTTAATG+TGG | + | chr2_3:12867498-12867517 | None:intergenic | 30.0% |
| ACATTAAAACAAAGACCTAC+TGG | - | chr2_3:12867497-12867516 | Msa0279250:CDS | 30.0% | |
| TTCATGCTATGGAAACAAAA+GGG | + | chr2_3:12867542-12867561 | None:intergenic | 30.0% | |
| TTTCATGCTATGGAAACAAA+AGG | + | chr2_3:12867543-12867562 | None:intergenic | 30.0% | |
| CAACTTATGATTTCATGCTA+TGG | + | chr2_3:12867553-12867572 | None:intergenic | 30.0% | |
| GTGTCTCACTATATAAAAAG+TGG | - | chr2_3:12867655-12867674 | Msa0279250:intron | 30.0% | |
| ! | AAGTTTACCGTAATGCTTTT+TGG | - | chr2_3:12867836-12867855 | Msa0279250:intron | 30.0% |
| !! | TTGGTTAAATGTTGCTTTAG+GGG | - | chr2_3:12867855-12867874 | Msa0279250:intron | 30.0% |
| ACCATACATTATCTTCTACA+TGG | - | chr2_3:12867882-12867901 | Msa0279250:intron | 30.0% | |
| AATAATATAGCTGTTGCAGT+AGG | + | chr2_3:12867954-12867973 | None:intergenic | 30.0% | |
| AACAGCTATATTATTGTTCC+CGG | - | chr2_3:12867959-12867978 | Msa0279250:intron | 30.0% | |
| TATGGCAAAAAATAGATACC+GGG | + | chr2_3:12867980-12867999 | None:intergenic | 30.0% | |
| ! | CATGAATTCTTCTTGGTAAT+AGG | - | chr2_3:12868065-12868084 | Msa0279250:intron | 30.0% |
| ! | TCTTCTTGGTAATAGGAATT+TGG | - | chr2_3:12868072-12868091 | Msa0279250:intron | 30.0% |
| !!! | TTAGTTTTTTTCCCCTCAAA+AGG | - | chr2_3:12868110-12868129 | Msa0279250:intron | 30.0% |
| !!! | TAGTTTTTTTCCCCTCAAAA+GGG | - | chr2_3:12868111-12868130 | Msa0279250:intron | 30.0% |
| ! | ACTTGAATTTTCCCTTTTGA+GGG | + | chr2_3:12868125-12868144 | None:intergenic | 30.0% |
| !!! | AAGTACAGCTTTTAAAACCT+AGG | - | chr2_3:12868170-12868189 | Msa0279250:intron | 30.0% |
| AAAACACCAACATTACTTCA+TGG | + | chr2_3:12868895-12868914 | None:intergenic | 30.0% | |
| AAAATAACAATTGTGCCAAC+TGG | + | chr2_3:12869277-12869296 | None:intergenic | 30.0% | |
| GTTTACAAGACGGAAATAAT+TGG | + | chr2_3:12869440-12869459 | None:intergenic | 30.0% | |
| AAAAACTTTATCCCAAAGTG+AGG | + | chr2_3:12869555-12869574 | None:intergenic | 30.0% | |
| !!! | TCACTTTGGGATAAAGTTTT+TGG | - | chr2_3:12869554-12869573 | Msa0279250:intron | 30.0% |
| !!! | GCCATTTTTCGTCAATTTTT+TGG | - | chr2_3:12869735-12869754 | Msa0279250:five_prime_UTR | 30.0% |
| CTTTACAATGTGTTCACAAT+TGG | + | chr2_3:12869773-12869792 | None:intergenic | 30.0% | |
| GTAAAGTAGAATATGTTACC+AGG | - | chr2_3:12869787-12869806 | Msa0279250:five_prime_UTR | 30.0% | |
| GAAGTAAAATCACAGCAAAA+AGG | + | chr2_3:12869834-12869853 | None:intergenic | 30.0% | |
| TGATGAGGCAATGATTTAGT+GGG | + | chr2_3:12865188-12865207 | None:intergenic | 35.0% | |
| AACGTAGAAAAAGGGATTTG+GGG | + | chr2_3:12865232-12865251 | None:intergenic | 35.0% | |
| GAACGTAGAAAAAGGGATTT+GGG | + | chr2_3:12865233-12865252 | None:intergenic | 35.0% | |
| TGAACGTAGAAAAAGGGATT+TGG | + | chr2_3:12865234-12865253 | None:intergenic | 35.0% | |
| TGAGAGTGAACGTAGAAAAA+GGG | + | chr2_3:12865240-12865259 | None:intergenic | 35.0% | |
| ! | TTTTTCTACGTTCACTCTCA+CGG | - | chr2_3:12865240-12865259 | Msa0279250:three_prime_UTR | 35.0% |
| TAAGAAGAAAACAATGCAGG+TGG | + | chr2_3:12865339-12865358 | None:intergenic | 35.0% | |
| CAGTAAGAAGAAAACAATGC+AGG | + | chr2_3:12865342-12865361 | None:intergenic | 35.0% | |
| ! | TGATGACGAGTGAAAAAGTT+TGG | - | chr2_3:12865785-12865804 | Msa0279250:intron | 35.0% |
| !! | CTGTAAGGGTGTTTATTAGA+TGG | - | chr2_3:12865854-12865873 | Msa0279250:intron | 35.0% |
| ! | TTAATTTGGGACGTAAGCTT+TGG | - | chr2_3:12865890-12865909 | Msa0279250:CDS | 35.0% |
| !! | CTGACTTTTTCCTACAAGAA+AGG | - | chr2_3:12866202-12866221 | Msa0279250:intron | 35.0% |
| TCAATGTCAACCTTTCTTGT+AGG | + | chr2_3:12866215-12866234 | None:intergenic | 35.0% | |
| TGACATTGATGTCATTCGAA+AGG | - | chr2_3:12866226-12866245 | Msa0279250:intron | 35.0% | |
| AAGGCATGTGAAAACAATGT+TGG | - | chr2_3:12866245-12866264 | Msa0279250:intron | 35.0% | |
| CAAATCAACTACAAAGTCCT+GGG | + | chr2_3:12866413-12866432 | None:intergenic | 35.0% | |
| TCAAATCAACTACAAAGTCC+TGG | + | chr2_3:12866414-12866433 | None:intergenic | 35.0% | |
| !! | ACCTCATTTTGAAAGAAACG+GGG | + | chr2_3:12866700-12866719 | None:intergenic | 35.0% |
| ! | CTTTCAAAATGAGGTTCTAG+AGG | - | chr2_3:12866705-12866724 | Msa0279250:intron | 35.0% |
| CCTGATAAAAAGTAGACATG+TGG | + | chr2_3:12866955-12866974 | None:intergenic | 35.0% | |
| !!! | CCACATGTCTACTTTTTATC+AGG | - | chr2_3:12866952-12866971 | Msa0279250:intron | 35.0% |
| TCACATGATGAAACTTCACT+GGG | - | chr2_3:12866995-12867014 | Msa0279250:CDS | 35.0% | |
| ! | TGCTTTGAGTAACAGCTTAT+TGG | - | chr2_3:12867797-12867816 | Msa0279250:intron | 35.0% |
| GCCATGTAGAAGATAATGTA+TGG | + | chr2_3:12867886-12867905 | None:intergenic | 35.0% | |
| ! | CTTGAATTTTCCCTTTTGAG+GGG | + | chr2_3:12868124-12868143 | None:intergenic | 35.0% |
| ! | GACTTGAATTTTCCCTTTTG+AGG | + | chr2_3:12868126-12868145 | None:intergenic | 35.0% |
| GGAAAATTCAAGTCTCACAT+TGG | - | chr2_3:12868132-12868151 | Msa0279250:intron | 35.0% | |
| !! | CCTTACAAAACGGACTAAAA+AGG | + | chr2_3:12868205-12868224 | None:intergenic | 35.0% |
| !! | CCTTTTTAGTCCGTTTTGTA+AGG | - | chr2_3:12868202-12868221 | Msa0279250:intron | 35.0% |
| TCTAACTCAGCCTTACAAAA+CGG | + | chr2_3:12868215-12868234 | None:intergenic | 35.0% | |
| CCACAGGTTTCTAATTAGAT+AGG | + | chr2_3:12868255-12868274 | None:intergenic | 35.0% | |
| CCTATCTAATTAGAAACCTG+TGG | - | chr2_3:12868252-12868271 | Msa0279250:CDS | 35.0% | |
| AAAATTGAACCTGATTGGTG+AGG | + | chr2_3:12868321-12868340 | None:intergenic | 35.0% | |
| TTCGATGTGAAACTCCTTAA+AGG | + | chr2_3:12868375-12868394 | None:intergenic | 35.0% | |
| ! | TAGATGGATTCTTTGTAACG+TGG | - | chr2_3:12868435-12868454 | Msa0279250:intron | 35.0% |
| ATTTGGAAGGAAAATCACCA+TGG | - | chr2_3:12868485-12868504 | Msa0279250:intron | 35.0% | |
| TTTGGAAGGAAAATCACCAT+GGG | - | chr2_3:12868486-12868505 | Msa0279250:intron | 35.0% | |
| GTTGAATGGTATAAGAATGG+TGG | - | chr2_3:12868549-12868568 | Msa0279250:exon | 35.0% | |
| TCTTAAGCTCCTATCAAAGA+AGG | + | chr2_3:12868665-12868684 | None:intergenic | 35.0% | |
| GTGTTGTAGTAGTACAAAAC+TGG | + | chr2_3:12868742-12868761 | None:intergenic | 35.0% | |
| !! | TGTTGGTGTTTTGTATTTCG+CGG | - | chr2_3:12868903-12868922 | Msa0279250:intron | 35.0% |
| ATAAAGCAGGAGTAGTTGAA+GGG | + | chr2_3:12868965-12868984 | None:intergenic | 35.0% | |
| AATAAAGCAGGAGTAGTTGA+AGG | + | chr2_3:12868966-12868985 | None:intergenic | 35.0% | |
| ! | TCAACTACTCCTGCTTTATT+TGG | - | chr2_3:12868966-12868985 | Msa0279250:intron | 35.0% |
| ACCATGGTGCAAGTAATAAT+GGG | + | chr2_3:12869027-12869046 | None:intergenic | 35.0% | |
| AAATTGCCATCCACAGTTAA+AGG | + | chr2_3:12869103-12869122 | None:intergenic | 35.0% | |
| CAAAATATTGGAGCAACGAA+TGG | + | chr2_3:12869131-12869150 | None:intergenic | 35.0% | |
| CTGGTTACATACACATATCT+AGG | + | chr2_3:12869258-12869277 | None:intergenic | 35.0% | |
| GATATGTGTATGTAACCAGT+TGG | - | chr2_3:12869259-12869278 | Msa0279250:intron | 35.0% | |
| AGACAAAGTTAAAAGAAGGC+AGG | + | chr2_3:12869301-12869320 | None:intergenic | 35.0% | |
| TAATGGCCAGACTTATTTGA+AGG | - | chr2_3:12869340-12869359 | Msa0279250:intron | 35.0% | |
| AATGGCCAGACTTATTTGAA+GGG | - | chr2_3:12869341-12869360 | Msa0279250:intron | 35.0% | |
| AAATTAACAACCCTTAGCAG+AGG | + | chr2_3:12869368-12869387 | None:intergenic | 35.0% | |
| ! | ATTGGTTGGTATTCTCCAAA+AGG | + | chr2_3:12869422-12869441 | None:intergenic | 35.0% |
| ACAAGACGGAAATAATTGGT+TGG | + | chr2_3:12869436-12869455 | None:intergenic | 35.0% | |
| GGCTTGTATAGTTTACAAGA+CGG | + | chr2_3:12869450-12869469 | None:intergenic | 35.0% | |
| AAAACCAGGGAAAGATGATT+AGG | + | chr2_3:12869471-12869490 | None:intergenic | 35.0% | |
| TATCTTGGATCCTAAAGTGA+TGG | + | chr2_3:12869514-12869533 | None:intergenic | 35.0% | |
| !! | CACTTTAGGATCCAAGATAA+AGG | - | chr2_3:12869515-12869534 | Msa0279250:intron | 35.0% |
| AGGATCCAAGATAAAGGATT+TGG | - | chr2_3:12869521-12869540 | Msa0279250:intron | 35.0% | |
| GGATCCAAGATAAAGGATTT+GGG | - | chr2_3:12869522-12869541 | Msa0279250:intron | 35.0% | |
| TGATCCCAAATCCTTTATCT+TGG | + | chr2_3:12869529-12869548 | None:intergenic | 35.0% | |
| AGAATATGTTACCAGGTTTG+TGG | - | chr2_3:12869794-12869813 | Msa0279250:five_prime_UTR | 35.0% | |
| GATGAGGCAATGATTTAGTG+GGG | + | chr2_3:12865187-12865206 | None:intergenic | 40.0% | |
| GTGATGAGGCAATGATTTAG+TGG | + | chr2_3:12865189-12865208 | None:intergenic | 40.0% | |
| GTGAGAGTGAACGTAGAAAA+AGG | + | chr2_3:12865241-12865260 | None:intergenic | 40.0% | |
| AATGCAGGTGGAATCGAAAT+CGG | + | chr2_3:12865327-12865346 | None:intergenic | 40.0% | |
| !!! | ACGACTATGGTCTTTTTTGG+TGG | - | chr2_3:12865831-12865850 | Msa0279250:intron | 40.0% |
| !!! | GTCTTTTTTGGTGGCTGTAA+GGG | - | chr2_3:12865840-12865859 | Msa0279250:intron | 40.0% |
| ! | GTTCTATAGGTTGGACATCT+TGG | - | chr2_3:12866625-12866644 | Msa0279250:intron | 40.0% |
| TTGGTGAAGCTTATGAAGAG+TGG | - | chr2_3:12866644-12866663 | Msa0279250:intron | 40.0% | |
| TGGTGAAGCTTATGAAGAGT+GGG | - | chr2_3:12866645-12866664 | Msa0279250:intron | 40.0% | |
| TCCCCGTTTCTTTCAAAATG+AGG | - | chr2_3:12866696-12866715 | Msa0279250:intron | 40.0% | |
| GATACAAGACTTAGCTGTTG+TGG | + | chr2_3:12866748-12866767 | None:intergenic | 40.0% | |
| ! | CAGCTAAGTCTTGTATCACT+TGG | - | chr2_3:12866751-12866770 | Msa0279250:intron | 40.0% |
| GGTAGACCAGTTAACGATAT+TGG | - | chr2_3:12866815-12866834 | Msa0279250:intron | 40.0% | |
| CTCACATGATGAAACTTCAC+TGG | - | chr2_3:12866994-12867013 | Msa0279250:CDS | 40.0% | |
| ACAACTGGAAGCCAAATAAC+TGG | + | chr2_3:12867355-12867374 | None:intergenic | 40.0% | |
| ! | TTTGGCTTCCAGTTGTATGT+TGG | - | chr2_3:12867359-12867378 | Msa0279250:intron | 40.0% |
| ! | TGGTTCTTGGCATTTTTGTG+TGG | - | chr2_3:12867437-12867456 | Msa0279250:intron | 40.0% |
| !!! | TGAGACACACCCTGTTTTTA+GGG | + | chr2_3:12867643-12867662 | None:intergenic | 40.0% |
| GTGGGACTTACATGATTTAG+TGG | - | chr2_3:12867674-12867693 | Msa0279250:intron | 40.0% | |
| GCTGTTACTCAAAGCAGATA+TGG | + | chr2_3:12867793-12867812 | None:intergenic | 40.0% | |
| ACAAGTCTCAAACCATCCAT+GGG | + | chr2_3:12867924-12867943 | None:intergenic | 40.0% | |
| AACAAGTCTCAAACCATCCA+TGG | + | chr2_3:12867925-12867944 | None:intergenic | 40.0% | |
| ATATAGCTGTTGCAGTAGGA+GGG | + | chr2_3:12867950-12867969 | None:intergenic | 40.0% | |
| AATATAGCTGTTGCAGTAGG+AGG | + | chr2_3:12867951-12867970 | None:intergenic | 40.0% | |
| !! | AAAACGGACTAAAAAGGCGA+GGG | + | chr2_3:12868199-12868218 | None:intergenic | 40.0% |
| AGATAGGACAGTCTTTGCTT+TGG | + | chr2_3:12868239-12868258 | None:intergenic | 40.0% | |
| TAAAGCAGGAGTAGTTGAAG+GGG | + | chr2_3:12868964-12868983 | None:intergenic | 40.0% | |
| !! | ACTACTCCTGCTTTATTTGG+CGG | - | chr2_3:12868969-12868988 | Msa0279250:intron | 40.0% |
| ACCCATTATTACTTGCACCA+TGG | - | chr2_3:12869023-12869042 | Msa0279250:intron | 40.0% | |
| GACCATGGTGCAAGTAATAA+TGG | + | chr2_3:12869028-12869047 | None:intergenic | 40.0% | |
| !! | TGCTTTTACCTTCAGGTTTC+GGG | + | chr2_3:12869069-12869088 | None:intergenic | 40.0% |
| !! | GTGCTTTTACCTTCAGGTTT+CGG | + | chr2_3:12869070-12869089 | None:intergenic | 40.0% |
| ATCCACAGTTAAAGGAGGAA+GGG | + | chr2_3:12869095-12869114 | None:intergenic | 40.0% | |
| ATGGCCAGACTTATTTGAAG+GGG | - | chr2_3:12869342-12869361 | Msa0279250:intron | 40.0% | |
| ACCACTTGAACCATCACTTT+AGG | - | chr2_3:12869501-12869520 | Msa0279250:intron | 40.0% | |
| TCCTAAAGTGATGGTTCAAG+TGG | + | chr2_3:12869505-12869524 | None:intergenic | 40.0% | |
| AACACTTCCTTCCTCAAAAG+CGG | - | chr2_3:12869577-12869596 | Msa0279250:intron | 40.0% | |
| CTGTTAGGGATAGCATATGT+TGG | - | chr2_3:12869622-12869641 | Msa0279250:five_prime_UTR | 40.0% | |
| TAGGGATAGCATATGTTGGT+TGG | - | chr2_3:12869626-12869645 | Msa0279250:five_prime_UTR | 40.0% | |
| TGCTCCACAATTGATGTTTG+CGG | - | chr2_3:12869703-12869722 | Msa0279250:five_prime_UTR | 40.0% | |
| ATATGTTACCAGGTTTGTGG+TGG | - | chr2_3:12869797-12869816 | Msa0279250:five_prime_UTR | 40.0% | |
| ATACATTTCCACCACAAACC+TGG | + | chr2_3:12869808-12869827 | None:intergenic | 40.0% | |
| GGGGTATAAGAGAGATGATC+TGG | + | chr2_3:12865168-12865187 | None:intergenic | 45.0% | |
| !!! | GGTCTTTTTTGGTGGCTGTA+AGG | - | chr2_3:12865839-12865858 | Msa0279250:intron | 45.0% |
| ATGTAGAGAAGTGGGATGTC+CGG | - | chr2_3:12866010-12866029 | Msa0279250:CDS | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr2_3:12866072-12866091 | None:intergenic | 45.0% |
| !!! | GAATAAGCCCCTTGTTTTCC+AGG | - | chr2_3:12866432-12866451 | Msa0279250:intron | 45.0% |
| AGCCTGTACCTGGAAAACAA+GGG | + | chr2_3:12866443-12866462 | None:intergenic | 45.0% | |
| AAGCCTGTACCTGGAAAACA+AGG | + | chr2_3:12866444-12866463 | None:intergenic | 45.0% | |
| TCATCAGCCCATTGTTAGCA+AGG | - | chr2_3:12866669-12866688 | Msa0279250:intron | 45.0% | |
| GGACCTTCCTTGCTAACAAT+GGG | + | chr2_3:12866679-12866698 | None:intergenic | 45.0% | |
| GGTGGGCAATACCAGTTATT+TGG | - | chr2_3:12867341-12867360 | Msa0279250:intron | 45.0% | |
| !! | CTGTCCTCATATAGCTCTGA+TGG | - | chr2_3:12867414-12867433 | Msa0279250:intron | 45.0% |
| !! | TCCTCATATAGCTCTGATGG+TGG | - | chr2_3:12867417-12867436 | Msa0279250:intron | 45.0% |
| ACCACCATCAGAGCTATATG+AGG | + | chr2_3:12867421-12867440 | None:intergenic | 45.0% | |
| !! | ATAGCTCTGATGGTGGTTCT+TGG | - | chr2_3:12867424-12867443 | Msa0279250:intron | 45.0% |
| CAGAGAGAGATCTAACCAGT+AGG | + | chr2_3:12867515-12867534 | None:intergenic | 45.0% | |
| !! | ATGCCGGTTTCCCTAAAAAC+AGG | - | chr2_3:12867630-12867649 | Msa0279250:intron | 45.0% |
| !! | TGCCGGTTTCCCTAAAAACA+GGG | - | chr2_3:12867631-12867650 | Msa0279250:intron | 45.0% |
| !!! | CACCCTGTTTTTAGGGAAAC+CGG | + | chr2_3:12867636-12867655 | None:intergenic | 45.0% |
| !! | GTGAGACACACCCTGTTTTT+AGG | + | chr2_3:12867644-12867663 | None:intergenic | 45.0% |
| CAAGTCTCAAACCATCCATG+GGG | + | chr2_3:12867923-12867942 | None:intergenic | 45.0% | |
| !! | CAAAACGGACTAAAAAGGCG+AGG | + | chr2_3:12868200-12868219 | None:intergenic | 45.0% |
| AAAGGATGACTGACATCCAC+AGG | + | chr2_3:12868271-12868290 | None:intergenic | 45.0% | |
| AATCACCATGGGCACAACAT+TGG | - | chr2_3:12868497-12868516 | Msa0279250:intron | 45.0% | |
| ! | CAACATTGGCTGTTTGAAGC+CGG | - | chr2_3:12868511-12868530 | Msa0279250:intron | 45.0% |
| TTTATTTGGCGGTGGCTTAC+TGG | - | chr2_3:12868980-12868999 | Msa0279250:intron | 45.0% | |
| TTATTTGGCGGTGGCTTACT+GGG | - | chr2_3:12868981-12869000 | Msa0279250:intron | 45.0% | |
| TTTCGGGGATGTTCAGTCTT+TGG | + | chr2_3:12869053-12869072 | None:intergenic | 45.0% | |
| !! | GCTTTTACCTTCAGGTTTCG+GGG | + | chr2_3:12869068-12869087 | None:intergenic | 45.0% |
| !!! | AGGGAAGTGCTTTTACCTTC+AGG | + | chr2_3:12869076-12869095 | None:intergenic | 45.0% |
| TTCCCTTCCTCCTTTAACTG+TGG | - | chr2_3:12869090-12869109 | Msa0279250:intron | 45.0% | |
| CATCCACAGTTAAAGGAGGA+AGG | + | chr2_3:12869096-12869115 | None:intergenic | 45.0% | |
| CTTCCTCCTTTAACTGTGGA+TGG | - | chr2_3:12869094-12869113 | Msa0279250:intron | 45.0% | |
| TTGCCATCCACAGTTAAAGG+AGG | + | chr2_3:12869100-12869119 | None:intergenic | 45.0% | |
| CAAGCCTAATCATCTTTCCC+TGG | - | chr2_3:12869464-12869483 | Msa0279250:intron | 45.0% | |
| GGTACTTCTGCAGAAAACCA+GGG | + | chr2_3:12869484-12869503 | None:intergenic | 45.0% | |
| TGGTACTTCTGCAGAAAACC+AGG | + | chr2_3:12869485-12869504 | None:intergenic | 45.0% | |
| TTGGGATCACTTCCTCACTT+TGG | - | chr2_3:12869540-12869559 | Msa0279250:intron | 45.0% | |
| TGGGATCACTTCCTCACTTT+GGG | - | chr2_3:12869541-12869560 | Msa0279250:intron | 45.0% | |
| !! | TTAGCATCCGCTTTTGAGGA+AGG | + | chr2_3:12869587-12869606 | None:intergenic | 45.0% |
| !! | GCTTTTAGCATCCGCTTTTG+AGG | + | chr2_3:12869591-12869610 | None:intergenic | 45.0% |
| GCTCCACAATTGATGTTTGC+GGG | - | chr2_3:12869704-12869723 | Msa0279250:five_prime_UTR | 45.0% | |
| CTCCACAATTGATGTTTGCG+GGG | - | chr2_3:12869705-12869724 | Msa0279250:five_prime_UTR | 45.0% | |
| AACCCCGCAAACATCAATTG+TGG | + | chr2_3:12869710-12869729 | None:intergenic | 45.0% | |
| !!! | GAATTATTAATATTTTTTTT+AGG | - | chr2_3:12865647-12865666 | Msa0279250:intron | 5.0% |
| !!! | TAAAAAAACAATTATTATTT+TGG | + | chr2_3:12869858-12869877 | None:intergenic | 5.0% |
| GAATCTAGCCGTTGACAGAC+TGG | + | chr2_3:12865110-12865129 | None:intergenic | 50.0% | |
| GCGTGTTGTGTTGAGTGATG+AGG | + | chr2_3:12865203-12865222 | None:intergenic | 50.0% | |
| TGGTCAAGTAGTCGAGTGTC+TGG | - | chr2_3:12865971-12865990 | Msa0279250:CDS | 50.0% | |
| TGTAGAGAAGTGGGATGTCC+GGG | - | chr2_3:12866011-12866030 | Msa0279250:CDS | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+AGG | - | chr2_3:12866073-12866092 | Msa0279250:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACA+GGG | - | chr2_3:12866074-12866093 | Msa0279250:intron | 50.0% | |
| TTTGGCGTTCAGCACCAAGA+TGG | - | chr2_3:12866384-12866403 | Msa0279250:intron | 50.0% | |
| AAAGTCCTGGGCAACCATCT+TGG | + | chr2_3:12866401-12866420 | None:intergenic | 50.0% | |
| GCCTGTACCTGGAAAACAAG+GGG | + | chr2_3:12866442-12866461 | None:intergenic | 50.0% | |
| ! | TTACGGGTTAAGCCTGTACC+TGG | + | chr2_3:12866453-12866472 | None:intergenic | 50.0% |
| CAGCCCATTGTTAGCAAGGA+AGG | - | chr2_3:12866673-12866692 | Msa0279250:intron | 50.0% | |
| GGGACCTTCCTTGCTAACAA+TGG | + | chr2_3:12866680-12866699 | None:intergenic | 50.0% | |
| !! | TGTATCACTTGGTGTACGCG+TGG | - | chr2_3:12866762-12866781 | Msa0279250:intron | 50.0% |
| !! | GTATCACTTGGTGTACGCGT+GGG | - | chr2_3:12866763-12866782 | Msa0279250:intron | 50.0% |
| !! | TATCACTTGGTGTACGCGTG+GGG | - | chr2_3:12866764-12866783 | Msa0279250:intron | 50.0% |
| TATTGCCCACCAGACAGTGA+GGG | + | chr2_3:12867332-12867351 | None:intergenic | 50.0% | |
| GAGCTATATGAGGACAGCTG+AGG | + | chr2_3:12867411-12867430 | None:intergenic | 50.0% | |
| ! | AACCATCCATGGGGTGTTTG+TGG | + | chr2_3:12867914-12867933 | None:intergenic | 50.0% |
| TAAAAAGGCGAGGGTTGCCT+AGG | + | chr2_3:12868190-12868209 | None:intergenic | 50.0% | |
| GGTTTCTCACCTCACCAATC+AGG | - | chr2_3:12868309-12868328 | Msa0279250:CDS | 50.0% | |
| AACAGCCAATGTTGTGCCCA+TGG | + | chr2_3:12868505-12868524 | None:intergenic | 50.0% | |
| TATTTCGCGGACTCCAGTTC+TGG | - | chr2_3:12868916-12868935 | Msa0279250:intron | 50.0% | |
| !! | ACTCCTGCTTTATTTGGCGG+TGG | - | chr2_3:12868972-12868991 | Msa0279250:intron | 50.0% |
| AAGCCACCGCCAAATAAAGC+AGG | + | chr2_3:12868978-12868997 | None:intergenic | 50.0% | |
| GTTCAGTCTTTGGCTGACCA+TGG | + | chr2_3:12869043-12869062 | None:intergenic | 50.0% | |
| TGAACATCCCCGAAACCTGA+AGG | - | chr2_3:12869058-12869077 | Msa0279250:intron | 50.0% | |
| GAGGCCCCTTCAAATAAGTC+TGG | + | chr2_3:12869349-12869368 | None:intergenic | 50.0% | |
| ATTTGAAGGGGCCTCTGCTA+AGG | - | chr2_3:12869354-12869373 | Msa0279250:intron | 50.0% | |
| TTTGAAGGGGCCTCTGCTAA+GGG | - | chr2_3:12869355-12869374 | Msa0279250:intron | 50.0% | |
| ! | TTGACAGACTGGCTGCATGG+GGG | + | chr2_3:12865099-12865118 | None:intergenic | 55.0% |
| ! | GTTGACAGACTGGCTGCATG+GGG | + | chr2_3:12865100-12865119 | None:intergenic | 55.0% |
| ! | CGTTGACAGACTGGCTGCAT+GGG | + | chr2_3:12865101-12865120 | None:intergenic | 55.0% |
| CCATGCAGCCAGTCTGTCAA+CGG | - | chr2_3:12865099-12865118 | Msa0279250:three_prime_UTR | 55.0% | |
| GTAGAGAAGTGGGATGTCCG+GGG | - | chr2_3:12866012-12866031 | Msa0279250:CDS | 55.0% | |
| CCCTGTGAGCTTAGCTCAGT+TGG | + | chr2_3:12866077-12866096 | None:intergenic | 55.0% | |
| !!! | GCCCCTTGTTTTCCAGGTAC+AGG | - | chr2_3:12866438-12866457 | Msa0279250:intron | 55.0% |
| !! | ATCACTTGGTGTACGCGTGG+GGG | - | chr2_3:12866765-12866784 | Msa0279250:intron | 55.0% |
| GGAGATTGCTAGGCTAGGCT+AGG | - | chr2_3:12866789-12866808 | Msa0279250:intron | 55.0% | |
| TTGCTAGGCTAGGCTAGGCT+AGG | - | chr2_3:12866794-12866813 | Msa0279250:intron | 55.0% | |
| AGTCCTTGACCCTCACTGTC+TGG | - | chr2_3:12867320-12867339 | Msa0279250:intron | 55.0% | |
| CTTGACCCTCACTGTCTGGT+GGG | - | chr2_3:12867324-12867343 | Msa0279250:intron | 55.0% | |
| GTATTGCCCACCAGACAGTG+AGG | + | chr2_3:12867333-12867352 | None:intergenic | 55.0% | |
| ! | CATCCATGGGGTGTTTGTGG+TGG | + | chr2_3:12867911-12867930 | None:intergenic | 55.0% |
| CACCACAAACACCCCATGGA+TGG | - | chr2_3:12867909-12867928 | Msa0279250:intron | 55.0% | |
| GCTTCACCACGTTCCAGAAC+TGG | + | chr2_3:12868932-12868951 | None:intergenic | 55.0% | |
| AGCAGGAGTAGTTGAAGGGG+TGG | + | chr2_3:12868961-12868980 | None:intergenic | 55.0% | |
| ! | CCGTTGACAGACTGGCTGCA+TGG | + | chr2_3:12865102-12865121 | None:intergenic | 60.0% |
| GGCGCAGTTCTCATCGCTCA+CGG | - | chr2_3:12865261-12865280 | Msa0279250:three_prime_UTR | 60.0% | |
| GCAGTTCTCATCGCTCACGG+TGG | - | chr2_3:12865264-12865283 | Msa0279250:three_prime_UTR | 60.0% | |
| !! | GATCGAAGAAGCGCCGTGCA+CGG | + | chr2_3:12865299-12865318 | None:intergenic | 60.0% |
| CAGCACCAAGATGGTTGCCC+AGG | - | chr2_3:12866393-12866412 | Msa0279250:intron | 60.0% | |
| GGGGTGGAGATTGCTAGGCT+AGG | - | chr2_3:12866784-12866803 | Msa0279250:intron | 60.0% | |
| CCACCAGACAGTGAGGGTCA+AGG | + | chr2_3:12867326-12867345 | None:intergenic | 60.0% | |
| CCTTGACCCTCACTGTCTGG+TGG | - | chr2_3:12867323-12867342 | Msa0279250:intron | 60.0% | |
| CTGCCACCACAAACACCCCA+TGG | - | chr2_3:12867905-12867924 | Msa0279250:intron | 60.0% | |
| !! | CGGACTCCAGTTCTGGAACG+TGG | - | chr2_3:12868923-12868942 | Msa0279250:intron | 60.0% |
| GTGGTTCTCGCTGCCGTGCA+CGG | - | chr2_3:12865283-12865302 | Msa0279250:three_prime_UTR | 65.0% | |
| CAGGGCTGGGGTTTCAACCC+CGG | + | chr2_3:12866032-12866051 | None:intergenic | 65.0% | |
| !! | ACTTGGTGTACGCGTGGGGG+TGG | - | chr2_3:12866768-12866787 | Msa0279250:intron | 65.0% |
| GCGTGGGGGTGGAGATTGCT+AGG | - | chr2_3:12866779-12866798 | Msa0279250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 12865083 | 12869886 | 12865083 | ID=Msa0279250;Name=Msa0279250 |
| chr2_3 | mRNA | 12865083 | 12869886 | 12865083 | ID=Msa0279250-mRNA-1;Parent=Msa0279250;Name=Msa0279250-mRNA-1;_AED=0.14;_eAED=0.14;_QI=290|1|1|1|0.83|0.71|7|270|237 |
| chr2_3 | exon | 12865083 | 12865472 | 12865083 | ID=Msa0279250-mRNA-1:exon:5631;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12865890 | 12866036 | 12865890 | ID=Msa0279250-mRNA-1:exon:5630;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12866989 | 12867094 | 12866989 | ID=Msa0279250-mRNA-1:exon:5629;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12867451 | 12867647 | 12867451 | ID=Msa0279250-mRNA-1:exon:5628;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12868243 | 12868335 | 12868243 | ID=Msa0279250-mRNA-1:exon:5627;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12868516 | 12868573 | 12868516 | ID=Msa0279250-mRNA-1:exon:5626;Parent=Msa0279250-mRNA-1 |
| chr2_3 | exon | 12869604 | 12869886 | 12869604 | ID=Msa0279250-mRNA-1:exon:5625;Parent=Msa0279250-mRNA-1 |
| chr2_3 | five_prime_UTR | 12869604 | 12869886 | 12869604 | ID=Msa0279250-mRNA-1:five_prime_utr;Parent=Msa0279250-mRNA-1 |
| chr2_3 | five_prime_UTR | 12868567 | 12868573 | 12868567 | ID=Msa0279250-mRNA-1:five_prime_utr;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12868516 | 12868566 | 12868516 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12868243 | 12868335 | 12868243 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12867451 | 12867647 | 12867451 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12866989 | 12867094 | 12866989 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12865890 | 12866036 | 12865890 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | CDS | 12865353 | 12865472 | 12865353 | ID=Msa0279250-mRNA-1:cds;Parent=Msa0279250-mRNA-1 |
| chr2_3 | three_prime_UTR | 12865083 | 12865352 | 12865083 | ID=Msa0279250-mRNA-1:three_prime_utr;Parent=Msa0279250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
