Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318970 | XP_024633211.1 | 98.734 | 237 | 3 | 0 | 1 | 237 | 8 | 244 | 8.05e-173 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318970 | sp|O48916|FAH1_ARATH | 75.847 | 236 | 57 | 0 | 1 | 236 | 1 | 236 | 6.03e-134 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0318970 | 0.819126 | 1.368169e-52 | -8.615850e-47 |
| Msa0032610 | Msa0318970 | -0.810918 | 9.077047e-51 | -8.615850e-47 |
| Msa0042980 | Msa0318970 | 0.843054 | 1.773750e-58 | -8.615850e-47 |
| Msa0053900 | Msa0318970 | -0.801224 | 9.959942e-49 | -8.615850e-47 |
| Msa0063350 | Msa0318970 | 0.836365 | 9.766173e-57 | -8.615850e-47 |
| Msa0069260 | Msa0318970 | -0.813505 | 2.474648e-51 | -8.615850e-47 |
| Msa0069280 | Msa0318970 | -0.814602 | 1.417393e-51 | -8.615850e-47 |
| Msa0069310 | Msa0318970 | -0.820858 | 5.491426e-53 | -8.615850e-47 |
| Msa0071550 | Msa0318970 | -0.802778 | 4.773897e-49 | -8.615850e-47 |
| Msa0071910 | Msa0318970 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0085720 | Msa0318970 | -0.815467 | 9.107540e-52 | -8.615850e-47 |
| Msa0092990 | Msa0318970 | -0.825230 | 5.249383e-54 | -8.615850e-47 |
| Msa0099510 | Msa0318970 | -0.805778 | 1.132753e-49 | -8.615850e-47 |
| Msa0108850 | Msa0318970 | -0.820804 | 5.650526e-53 | -8.615850e-47 |
| Msa0120340 | Msa0318970 | -0.819964 | 8.806646e-53 | -8.615850e-47 |
| Msa0124550 | Msa0318970 | -0.811740 | 6.018264e-51 | -8.615850e-47 |
| Msa0134110 | Msa0318970 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0136890 | Msa0318970 | 0.815595 | 8.528268e-52 | -8.615850e-47 |
| Msa0140510 | Msa0318970 | 0.853540 | 2.233346e-61 | -8.615850e-47 |
| Msa0140520 | Msa0318970 | 0.832748 | 7.919587e-56 | -8.615850e-47 |
| Msa0148120 | Msa0318970 | -0.843479 | 1.366526e-58 | -8.615850e-47 |
| Msa0151950 | Msa0318970 | -0.815786 | 7.735430e-52 | -8.615850e-47 |
| Msa0156650 | Msa0318970 | 0.807767 | 4.304539e-50 | -8.615850e-47 |
| Msa0162770 | Msa0318970 | 0.820133 | 8.056235e-53 | -8.615850e-47 |
| Msa0175050 | Msa0318970 | -0.805166 | 1.521996e-49 | -8.615850e-47 |
| Msa0178860 | Msa0318970 | 0.846041 | 2.785227e-59 | -8.615850e-47 |
| Msa0180990 | Msa0318970 | 0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa0183010 | Msa0318970 | 0.816593 | 5.105610e-52 | -8.615850e-47 |
| Msa0187220 | Msa0318970 | -0.803823 | 2.901032e-49 | -8.615850e-47 |
| Msa0191630 | Msa0318970 | -0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0196020 | Msa0318970 | 0.831454 | 1.653778e-55 | -8.615850e-47 |
| Msa0199800 | Msa0318970 | 0.815956 | 7.088539e-52 | -8.615850e-47 |
| Msa0223100 | Msa0318970 | -0.800259 | 1.567228e-48 | -8.615850e-47 |
| Msa0223290 | Msa0318970 | -0.808521 | 2.973320e-50 | -8.615850e-47 |
| Msa0223380 | Msa0318970 | -0.832215 | 1.073351e-55 | -8.615850e-47 |
| Msa0229490 | Msa0318970 | 0.814406 | 1.565587e-51 | -8.615850e-47 |
| Msa0233610 | Msa0318970 | -0.832636 | 8.443500e-56 | -8.615850e-47 |
| Msa0241460 | Msa0318970 | 0.895085 | 1.339731e-75 | -8.615850e-47 |
| Msa0266210 | Msa0318970 | -0.817065 | 4.000272e-52 | -8.615850e-47 |
| Msa0268090 | Msa0318970 | -0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0269450 | Msa0318970 | -0.829670 | 4.521152e-55 | -8.615850e-47 |
| Msa0275400 | Msa0318970 | 0.800512 | 1.391967e-48 | -8.615850e-47 |
| Msa0279210 | Msa0318970 | 0.996628 | 4.957993e-230 | -8.615850e-47 |
| Msa0279250 | Msa0318970 | 0.982409 | 5.108830e-155 | -8.615850e-47 |
| Msa0281480 | Msa0318970 | -0.818834 | 1.593575e-52 | -8.615850e-47 |
| Msa0287670 | Msa0318970 | -0.814569 | 1.441200e-51 | -8.615850e-47 |
| Msa0306210 | Msa0318970 | 0.835752 | 1.397695e-56 | -8.615850e-47 |
| Msa0307830 | Msa0318970 | 0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0308200 | Msa0318970 | -0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa0312310 | Msa0318970 | -0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0318970 | Msa0320610 | -0.803986 | 2.683151e-49 | -8.615850e-47 |
| Msa0318970 | Msa0347610 | -0.815911 | 7.250928e-52 | -8.615850e-47 |
| Msa0318970 | Msa0362060 | -0.809341 | 1.985161e-50 | -8.615850e-47 |
| Msa0318970 | Msa0365490 | -0.834027 | 3.799617e-56 | -8.615850e-47 |
| Msa0318970 | Msa0381600 | 0.816932 | 4.286086e-52 | -8.615850e-47 |
| Msa0318970 | Msa0388030 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa0318970 | Msa0389810 | -0.849161 | 3.861999e-60 | -8.615850e-47 |
| Msa0318970 | Msa0392040 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0318970 | Msa0394340 | -0.831002 | 2.136081e-55 | -8.615850e-47 |
| Msa0318970 | Msa0404000 | -0.808385 | 3.178675e-50 | -8.615850e-47 |
| Msa0318970 | Msa0404030 | -0.800010 | 1.761346e-48 | -8.615850e-47 |
| Msa0318970 | Msa0408790 | 0.800759 | 1.239611e-48 | -8.615850e-47 |
| Msa0318970 | Msa0419640 | 0.808730 | 2.682778e-50 | -8.615850e-47 |
| Msa0318970 | Msa0421170 | -0.814400 | 1.570436e-51 | -8.615850e-47 |
| Msa0318970 | Msa0436190 | -0.813176 | 2.922307e-51 | -8.615850e-47 |
| Msa0318970 | Msa0444090 | -0.817672 | 2.921131e-52 | -8.615850e-47 |
| Msa0318970 | Msa0458440 | -0.804970 | 1.673034e-49 | -8.615850e-47 |
| Msa0318970 | Msa0464900 | -0.829828 | 4.136350e-55 | -8.615850e-47 |
| Msa0318970 | Msa0465670 | 0.807129 | 5.876391e-50 | -8.615850e-47 |
| Msa0318970 | Msa0465680 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa0318970 | Msa0468130 | -0.848379 | 6.363313e-60 | -8.615850e-47 |
| Msa0318970 | Msa0473240 | -0.801767 | 7.709009e-49 | -8.615850e-47 |
| Msa0318970 | Msa0477130 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0318970 | Msa0482190 | 0.829101 | 6.215919e-55 | -8.615850e-47 |
| Msa0318970 | Msa0485500 | 0.825094 | 5.652717e-54 | -8.615850e-47 |
| Msa0318970 | Msa0489610 | -0.828651 | 7.986243e-55 | -8.615850e-47 |
| Msa0318970 | Msa0491500 | -0.831454 | 1.654205e-55 | -8.615850e-47 |
| Msa0318970 | Msa0491520 | -0.851605 | 7.959677e-61 | -8.615850e-47 |
| Msa0318970 | Msa0505060 | -0.800430 | 1.446631e-48 | -8.615850e-47 |
| Msa0318970 | Msa0521620 | -0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0318970 | Msa0522560 | 0.801224 | 9.961244e-49 | -8.615850e-47 |
| Msa0318970 | Msa0524600 | -0.824010 | 1.017572e-53 | -8.615850e-47 |
| Msa0318970 | Msa0526670 | 0.812400 | 4.321094e-51 | -8.615850e-47 |
| Msa0318970 | Msa0553220 | 0.833506 | 5.128423e-56 | -8.615850e-47 |
| Msa0318970 | Msa0561130 | 0.823798 | 1.140715e-53 | -8.615850e-47 |
| Msa0318970 | Msa0576100 | 0.807254 | 5.529697e-50 | -8.615850e-47 |
| Msa0318970 | Msa0579370 | -0.813116 | 3.011582e-51 | -8.615850e-47 |
| Msa0318970 | Msa0581920 | -0.829325 | 5.483134e-55 | -8.615850e-47 |
| Msa0318970 | Msa0587190 | -0.807389 | 5.177677e-50 | -8.615850e-47 |
| Msa0318970 | Msa0599580 | -0.811757 | 5.969097e-51 | -8.615850e-47 |
| Msa0318970 | Msa0608710 | -0.800129 | 1.665610e-48 | -8.615850e-47 |
| Msa0318970 | Msa0609970 | -0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0318970 | Msa0614990 | -0.836955 | 6.906493e-57 | -8.615850e-47 |
| Msa0318970 | Msa0616540 | -0.813385 | 2.628802e-51 | -8.615850e-47 |
| Msa0318970 | Msa0647450 | 0.819134 | 1.361863e-52 | -8.615850e-47 |
| Msa0318970 | Msa0650620 | -0.821826 | 3.284428e-53 | -8.615850e-47 |
| Msa0318970 | Msa0650730 | -0.826790 | 2.235448e-54 | -8.615850e-47 |
| Msa0318970 | Msa0653320 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
| Msa0318970 | Msa0657460 | 0.829852 | 4.081205e-55 | -8.615850e-47 |
| Msa0318970 | Msa0662650 | -0.819282 | 1.260615e-52 | -8.615850e-47 |
| Msa0318970 | Msa0679550 | -0.806681 | 7.308985e-50 | -8.615850e-47 |
| Msa0318970 | Msa0708860 | -0.820964 | 5.191457e-53 | -8.615850e-47 |
| Msa0318970 | Msa0733740 | 0.818646 | 1.758643e-52 | -8.615850e-47 |
| Msa0318970 | Msa0743120 | 0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa0318970 | Msa0791820 | -0.827500 | 1.511399e-54 | -8.615850e-47 |
| Msa0318970 | Msa0827470 | -0.823777 | 1.153956e-53 | -8.615850e-47 |
| Msa0318970 | Msa0836210 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0318970 | Msa0860900 | 0.829350 | 5.407603e-55 | -8.615850e-47 |
| Msa0318970 | Msa0862800 | 0.828497 | 8.698883e-55 | -8.615850e-47 |
| Msa0318970 | Msa0864470 | 0.858966 | 5.728377e-63 | -8.615850e-47 |
| Msa0318970 | Msa0866010 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
| Msa0318970 | Msa0879860 | -0.821627 | 3.651601e-53 | -8.615850e-47 |
| Msa0318970 | Msa0908170 | -0.805206 | 1.492854e-49 | -8.615850e-47 |
| Msa0318970 | Msa0926800 | -0.801896 | 7.250634e-49 | -8.615850e-47 |
| Msa0318970 | Msa0930460 | 0.803914 | 2.776940e-49 | -8.615850e-47 |
| Msa0318970 | Msa0942550 | 0.850166 | 2.023894e-60 | -8.615850e-47 |
| Msa0318970 | Msa0942560 | 0.838907 | 2.176007e-57 | -8.615850e-47 |
| Msa0318970 | Msa0944730 | -0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0318970 | Msa0945100 | -0.821439 | 4.034347e-53 | -8.615850e-47 |
| Msa0318970 | Msa0945120 | -0.809309 | 2.016708e-50 | -8.615850e-47 |
| Msa0318970 | Msa0946690 | 0.827339 | 1.651942e-54 | -8.615850e-47 |
| Msa0318970 | Msa0965520 | -0.814723 | 1.332651e-51 | -8.615850e-47 |
| Msa0318970 | Msa0982270 | -0.851747 | 7.257604e-61 | -8.615850e-47 |
| Msa0318970 | Msa0999270 | 0.824869 | 6.389695e-54 | -8.615850e-47 |
| Msa0318970 | Msa0999960 | 0.806998 | 6.263730e-50 | -8.615850e-47 |
| Msa0318970 | Msa1021340 | -0.812005 | 5.268775e-51 | -8.615850e-47 |
| Msa0318970 | Msa1029080 | 0.850939 | 1.227139e-60 | -8.615850e-47 |
| Msa0318970 | Msa1033410 | 0.821393 | 4.136087e-53 | -8.615850e-47 |
| Msa0318970 | Msa1037700 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0318970 | Msa1039880 | -0.845628 | 3.606260e-59 | -8.615850e-47 |
| Msa0318970 | Msa1047720 | -0.818018 | 2.439304e-52 | -8.615850e-47 |
| Msa0318970 | Msa1072460 | 0.805181 | 1.511133e-49 | -8.615850e-47 |
| Msa0318970 | Msa1072530 | 0.827262 | 1.724315e-54 | -8.615850e-47 |
| Msa0318970 | Msa1073070 | 0.825958 | 3.528390e-54 | -8.615850e-47 |
| Msa0318970 | Msa1079730 | 0.834848 | 2.364366e-56 | -8.615850e-47 |
| Msa0318970 | Msa1092090 | -0.805266 | 1.450450e-49 | -8.615850e-47 |
| Msa0318970 | Msa1114350 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0318970 | Msa1124540 | 0.834403 | 3.058797e-56 | -8.615850e-47 |
| Msa0318970 | Msa1130210 | 0.808592 | 2.871989e-50 | -8.615850e-47 |
| Msa0318970 | Msa1131670 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0318970 | Msa1135880 | -0.805800 | 1.120733e-49 | -8.615850e-47 |
| Msa0318970 | Msa1143930 | 0.823085 | 1.674304e-53 | -8.615850e-47 |
| Msa0318970 | Msa1156170 | 0.844672 | 6.537694e-59 | -8.615850e-47 |
| Msa0318970 | Msa1168040 | 0.846793 | 1.737001e-59 | -8.615850e-47 |
| Msa0318970 | Msa1174310 | -0.804539 | 2.058333e-49 | -8.615850e-47 |
| Msa0318970 | Msa1183100 | 0.803167 | 3.966768e-49 | -8.615850e-47 |
| Msa0318970 | Msa1184150 | 0.805903 | 1.066381e-49 | -8.615850e-47 |
| Msa0318970 | Msa1190890 | 0.826007 | 3.434839e-54 | -8.615850e-47 |
| Msa0318970 | Msa1207460 | 0.873427 | 1.482840e-67 | -8.615850e-47 |
| Msa0318970 | Msa1208650 | 0.807672 | 4.508123e-50 | -8.615850e-47 |
| Msa0318970 | Msa1214880 | -0.815559 | 8.689479e-52 | -8.615850e-47 |
| Msa0318970 | Msa1217430 | 0.835293 | 1.825409e-56 | -8.615850e-47 |
| Msa0318970 | Msa1224580 | 0.817434 | 3.304161e-52 | -8.615850e-47 |
| Msa0318970 | Msa1228160 | 0.890461 | 9.647138e-74 | -8.615850e-47 |
| Msa0318970 | Msa1229850 | -0.839766 | 1.302334e-57 | -8.615850e-47 |
| Msa0318970 | Msa1236070 | 0.861704 | 8.508493e-64 | -8.615850e-47 |
| Msa0318970 | Msa1241800 | -0.805190 | 1.504582e-49 | -8.615850e-47 |
| Msa0318970 | Msa1244750 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0318970 | Msa1257640 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0318970 | Msa1258380 | 0.827925 | 1.194754e-54 | -8.615850e-47 |
| Msa0318970 | Msa1259490 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0318970 | Msa1259590 | 0.815375 | 9.547976e-52 | -8.615850e-47 |
| Msa0318970 | Msa1262990 | 0.802686 | 4.986518e-49 | -8.615850e-47 |
| Msa0318970 | Msa1263290 | 0.804457 | 2.140846e-49 | -8.615850e-47 |
| Msa0318970 | Msa1271170 | 0.836039 | 1.181962e-56 | -8.615850e-47 |
| Msa0318970 | Msa1300860 | -0.818267 | 2.143348e-52 | -8.615850e-47 |
| Msa0318970 | Msa1302190 | 0.834427 | 3.016777e-56 | -8.615850e-47 |
| Msa0318970 | Msa1307740 | -0.843579 | 1.284483e-58 | -8.615850e-47 |
| Msa0318970 | Msa1308330 | 0.888653 | 4.879633e-73 | -8.615850e-47 |
| Msa0318970 | Msa1314770 | -0.813312 | 2.728112e-51 | -8.615850e-47 |
| Msa0318970 | Msa1322190 | -0.843441 | 1.398455e-58 | -8.615850e-47 |
| Msa0318970 | Msa1331920 | -0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa0318970 | Msa1350690 | -0.816869 | 4.426817e-52 | -8.615850e-47 |
| Msa0318970 | Msa1359650 | 0.803513 | 3.362789e-49 | -8.615850e-47 |
| Msa0318970 | Msa1364330 | 0.827355 | 1.637887e-54 | -8.615850e-47 |
| Msa0318970 | Msa1371090 | -0.839339 | 1.681518e-57 | -8.615850e-47 |
| Msa0318970 | Msa1375700 | 0.828803 | 7.336947e-55 | -8.615850e-47 |
| Msa0318970 | Msa1387590 | -0.813069 | 3.084697e-51 | -8.615850e-47 |
| Msa0318970 | Msa1404240 | 0.824561 | 7.549304e-54 | -8.615850e-47 |
| Msa0318970 | Msa1412930 | 0.819878 | 9.217914e-53 | -8.615850e-47 |
| Msa0318970 | Msa1417810 | 0.850491 | 1.640708e-60 | -8.615850e-47 |
| Msa0318970 | Msa1417830 | 0.849271 | 3.599846e-60 | -8.615850e-47 |
| Msa0318970 | Msa1419660 | 0.802680 | 5.002060e-49 | -8.615850e-47 |
| Msa0318970 | Msa1438700 | -0.804964 | 1.677443e-49 | -8.615850e-47 |
| Msa0318970 | Msa1442220 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0318970 | Msa1443610 | -0.809455 | 1.876205e-50 | -8.615850e-47 |
| Msa0318970 | Msa1444250 | 0.843763 | 1.147052e-58 | -8.615850e-47 |
| Msa0318970 | Msa1445400 | 0.851360 | 9.336270e-61 | -8.615850e-47 |
| Msa0318970 | Msa1445420 | 0.847718 | 9.686475e-60 | -8.615850e-47 |
| Msa0318970 | Msa1449350 | 0.846677 | 1.868411e-59 | -8.615850e-47 |
| Msa0318970 | Msa1451620 | 0.832385 | 9.742088e-56 | -8.615850e-47 |
| Msa0318970 | Msa1452170 | -0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0318970 | Msa1459760 | 0.864641 | 1.050506e-64 | -8.615850e-47 |
| Msa0318970 | Msa1462060 | -0.812888 | 3.379381e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318970 | MtrunA17_Chr2g0292941 | 98.734 | 237 | 3 | 0 | 1 | 237 | 1 | 237 | 1.76e-176 | 484 |
| Msa0318970 | MtrunA17_Chr4g0051591 | 69.068 | 236 | 72 | 1 | 1 | 235 | 1 | 236 | 1.41e-114 | 327 |
| Msa0318970 | MtrunA17_Chr4g0051581 | 69.128 | 149 | 46 | 0 | 1 | 149 | 1 | 149 | 3.41e-67 | 205 |
| Msa0318970 | MtrunA17_Chr4g0051571 | 64.130 | 92 | 32 | 1 | 145 | 235 | 4 | 95 | 2.47e-37 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318970 | AT2G34770.1 | 75.847 | 236 | 57 | 0 | 1 | 236 | 1 | 236 | 6.13e-135 | 379 |
| Msa0318970 | AT4G20870.2 | 71.610 | 236 | 67 | 0 | 1 | 236 | 1 | 236 | 2.39e-126 | 357 |
| Msa0318970 | AT4G20870.1 | 71.610 | 236 | 67 | 0 | 1 | 236 | 1 | 236 | 2.39e-126 | 357 |
Find 111 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTGGCGGTGGCTTAC+TGG | 0.121516 | 2_4:+18162815 | Msa0318970:CDS |
| TCAACTACTCCTGCTTTATT+TGG | 0.215512 | 2_4:+18162801 | Msa0318970:CDS |
| AAGCATGTAAATTTACTGTT+AGG | 0.251857 | 2_4:+18163477 | Msa0318970:exon |
| AGGATCCAAGATAAAGGATT+TGG | 0.271287 | 2_4:+18163391 | Msa0318970:CDS |
| TTTCGGGGATGTTCAGTCTT+TGG | 0.281707 | 2_4:-18162885 | None:intergenic |
| GGTGGGCAATACCAGTTATT+TGG | 0.282521 | 2_4:+18161176 | Msa0318970:CDS |
| GTGAGAGTGAACGTAGAAAA+AGG | 0.296070 | 2_4:-18158972 | None:intergenic |
| TGGGATCACTTCCTCACTTT+GGG | 0.329323 | 2_4:+18163411 | Msa0318970:CDS |
| CTTTACAATGTGTTCACAAT+TGG | 0.330838 | 2_4:-18163640 | None:intergenic |
| GACCATGGTGCAAGTAATAA+TGG | 0.337316 | 2_4:-18162860 | None:intergenic |
| GCTCCACAATTGATGTTTGC+GGG | 0.354380 | 2_4:+18163574 | Msa0318970:three_prime_UTR |
| CACTTTAGGATCCAAGATAA+AGG | 0.360540 | 2_4:+18163385 | Msa0318970:CDS |
| AACAGCTATATTATTGTTCC+CGG | 0.368539 | 2_4:+18161794 | Msa0318970:CDS |
| GTTCTATAGGTTGGACATCT+TGG | 0.372108 | 2_4:+18160460 | Msa0318970:intron |
| ACCACTTGAACCATCACTTT+AGG | 0.374306 | 2_4:+18163371 | Msa0318970:CDS |
| TGATCCCAAATCCTTTATCT+TGG | 0.378096 | 2_4:-18163396 | None:intergenic |
| ATAGCTCTGATGGTGGTTCT+TGG | 0.379060 | 2_4:+18161259 | Msa0318970:CDS |
| TGTATATAACTCTATACAAA+TGG | 0.396707 | 2_4:+18161219 | Msa0318970:CDS |
| GAAGTAAAATCACAGCAAAA+AGG | 0.398929 | 2_4:-18163701 | None:intergenic |
| GGATCCAAGATAAAGGATTT+GGG | 0.400632 | 2_4:+18163392 | Msa0318970:CDS |
| AGCATGTAAATTTACTGTTA+GGG | 0.401645 | 2_4:+18163478 | Msa0318970:exon |
| TTGGGATCACTTCCTCACTT+TGG | 0.406513 | 2_4:+18163410 | Msa0318970:CDS |
| ACAACTGGAAGCCAAATAAC+TGG | 0.431941 | 2_4:-18161187 | None:intergenic |
| TATACAAACCAACATACAAC+TGG | 0.433560 | 2_4:-18161202 | None:intergenic |
| TTATTTGGCGGTGGCTTACT+GGG | 0.435203 | 2_4:+18162816 | Msa0318970:CDS |
| TGCTCCACAATTGATGTTTG+CGG | 0.448035 | 2_4:+18163573 | Msa0318970:three_prime_UTR |
| AACCATCCATGGGGTGTTTG+TGG | 0.448233 | 2_4:-18161746 | None:intergenic |
| GGGGTATAAGAGAGATGATC+TGG | 0.448716 | 2_4:-18158899 | None:intergenic |
| ACTACTCCTGCTTTATTTGG+CGG | 0.450026 | 2_4:+18162804 | Msa0318970:CDS |
| TCCCCGTTTCTTTCAAAATG+AGG | 0.458220 | 2_4:+18160531 | Msa0318970:CDS |
| AGTCCTTGACCCTCACTGTC+TGG | 0.464818 | 2_4:+18161155 | Msa0318970:intron |
| AGAGAATAAACTCTTCAAGA+TGG | 0.465942 | 2_4:-18158863 | None:intergenic |
| AAAGTCCTGGGCAACCATCT+TGG | 0.468070 | 2_4:-18160233 | None:intergenic |
| GTGGTTCTCGCTGCCGTGCA+CGG | 0.472594 | 2_4:+18159017 | Msa0318970:five_prime_UTR |
| TCAAATCAACTACAAAGTCC+TGG | 0.474615 | 2_4:-18160246 | None:intergenic |
| CGTTGACAGACTGGCTGCAT+GGG | 0.475217 | 2_4:-18158832 | None:intergenic |
| GGACCTTCCTTGCTAACAAT+GGG | 0.475219 | 2_4:-18160511 | None:intergenic |
| GAATCTAGCCGTTGACAGAC+TGG | 0.475725 | 2_4:-18158841 | None:intergenic |
| TTTGGCTTCCAGTTGTATGT+TGG | 0.477885 | 2_4:+18161194 | Msa0318970:CDS |
| AATGCAGGTGGAATCGAAAT+CGG | 0.483105 | 2_4:-18159058 | None:intergenic |
| AGAATATGTTACCAGGTTTG+TGG | 0.483297 | 2_4:+18163664 | Msa0318970:three_prime_UTR |
| AACAAGTCTCAAACCATCCA+TGG | 0.483587 | 2_4:-18161757 | None:intergenic |
| CCGTTGACAGACTGGCTGCA+TGG | 0.483782 | 2_4:-18158833 | None:intergenic |
| CTGTCCTCATATAGCTCTGA+TGG | 0.487299 | 2_4:+18161249 | Msa0318970:CDS |
| ACATTAAAACAAAGACCTAC+TGG | 0.502397 | 2_4:+18161332 | Msa0318970:CDS |
| CAGCCCATTGTTAGCAAGGA+AGG | 0.502882 | 2_4:+18160508 | Msa0318970:CDS |
| CCTTGACCCTCACTGTCTGG+TGG | 0.505883 | 2_4:+18161158 | Msa0318970:CDS |
| CAGCACCAAGATGGTTGCCC+AGG | 0.518070 | 2_4:+18160228 | Msa0318970:intron |
| AAGCCTGTACCTGGAAAACA+AGG | 0.518297 | 2_4:-18160276 | None:intergenic |
| AATATAGCTGTTGCAGTAGG+AGG | 0.519735 | 2_4:-18161783 | None:intergenic |
| GGGACCTTCCTTGCTAACAA+TGG | 0.525396 | 2_4:-18160512 | None:intergenic |
| GTATATAACTCTATACAAAT+GGG | 0.525508 | 2_4:+18161220 | Msa0318970:CDS |
| GCCATGTAGAAGATAATGTA+TGG | 0.525715 | 2_4:-18161718 | None:intergenic |
| AGCAGGAGTAGTTGAAGGGG+TGG | 0.532131 | 2_4:-18162793 | None:intergenic |
| ACCATGGTGCAAGTAATAAT+GGG | 0.532977 | 2_4:-18162859 | None:intergenic |
| ACTCCTGCTTTATTTGGCGG+TGG | 0.533512 | 2_4:+18162807 | Msa0318970:CDS |
| TATCTTGGATCCTAAAGTGA+TGG | 0.534098 | 2_4:-18163381 | None:intergenic |
| CTGTTAGGGATAGCATATGT+TGG | 0.535455 | 2_4:+18163492 | Msa0318970:three_prime_UTR |
| TAGGGATAGCATATGTTGGT+TGG | 0.535897 | 2_4:+18163496 | Msa0318970:three_prime_UTR |
| GTGATGAGGCAATGATTTAG+TGG | 0.536110 | 2_4:-18158920 | None:intergenic |
| AATAATTAGACAGATAAAAG+AGG | 0.536195 | 2_4:-18163545 | None:intergenic |
| CTTGACCCTCACTGTCTGGT+GGG | 0.548253 | 2_4:+18161159 | Msa0318970:CDS |
| AATAAAGCAGGAGTAGTTGA+AGG | 0.548583 | 2_4:-18162798 | None:intergenic |
| CAAATCAACTACAAAGTCCT+GGG | 0.550444 | 2_4:-18160245 | None:intergenic |
| TTTGGCGTTCAGCACCAAGA+TGG | 0.551359 | 2_4:+18160219 | Msa0318970:intron |
| GTTTATTCTCTTAAATCGAA+CGG | 0.555588 | 2_4:+18158875 | Msa0318970:five_prime_UTR |
| CTTTCAAAATGAGGTTCTAG+AGG | 0.555614 | 2_4:+18160540 | Msa0318970:CDS |
| TTGGTGAAGCTTATGAAGAG+TGG | 0.555652 | 2_4:+18160479 | Msa0318970:CDS |
| AAGCCACCGCCAAATAAAGC+AGG | 0.556526 | 2_4:-18162810 | None:intergenic |
| GGCGCAGTTCTCATCGCTCA+CGG | 0.565898 | 2_4:+18158995 | Msa0318970:five_prime_UTR |
| AACACTTCCTTCCTCAAAAG+CGG | 0.566327 | 2_4:+18163447 | Msa0318970:CDS |
| TCATCAGCCCATTGTTAGCA+AGG | 0.566774 | 2_4:+18160504 | Msa0318970:CDS |
| GTTCAGTCTTTGGCTGACCA+TGG | 0.566911 | 2_4:-18162875 | None:intergenic |
| TGGTGAAGCTTATGAAGAGT+GGG | 0.567564 | 2_4:+18160480 | Msa0318970:CDS |
| ACAAGTCTCAAACCATCCAT+GGG | 0.570404 | 2_4:-18161756 | None:intergenic |
| TCCTAAAGTGATGGTTCAAG+TGG | 0.570815 | 2_4:-18163372 | None:intergenic |
| CACCACAAACACCCCATGGA+TGG | 0.571556 | 2_4:+18161744 | Msa0318970:CDS |
| ATACATTTCCACCACAAACC+TGG | 0.572413 | 2_4:-18163675 | None:intergenic |
| ACCACCATCAGAGCTATATG+AGG | 0.581427 | 2_4:-18161253 | None:intergenic |
| ATATGTTACCAGGTTTGTGG+TGG | 0.583806 | 2_4:+18163667 | Msa0318970:three_prime_UTR |
| CCATGCAGCCAGTCTGTCAA+CGG | 0.584957 | 2_4:+18158833 | Msa0318970:five_prime_UTR |
| TGATGAGGCAATGATTTAGT+GGG | 0.590628 | 2_4:-18158919 | None:intergenic |
| GATCGAAGAAGCGCCGTGCA+CGG | 0.594362 | 2_4:-18159030 | None:intergenic |
| GTAAAGTAGAATATGTTACC+AGG | 0.594688 | 2_4:+18163657 | Msa0318970:three_prime_UTR |
| CTCCACAATTGATGTTTGCG+GGG | 0.596265 | 2_4:+18163575 | Msa0318970:three_prime_UTR |
| AATAATATAGCTGTTGCAGT+AGG | 0.598883 | 2_4:-18161786 | None:intergenic |
| CTGCCACCACAAACACCCCA+TGG | 0.603098 | 2_4:+18161740 | Msa0318970:CDS |
| ATATAGCTGTTGCAGTAGGA+GGG | 0.606939 | 2_4:-18161782 | None:intergenic |
| GTTGACAGACTGGCTGCATG+GGG | 0.610822 | 2_4:-18158831 | None:intergenic |
| CAGTAAGAAGAAAACAATGC+AGG | 0.613263 | 2_4:-18159073 | None:intergenic |
| ATAAAGCAGGAGTAGTTGAA+GGG | 0.615938 | 2_4:-18162797 | None:intergenic |
| GATGAGGCAATGATTTAGTG+GGG | 0.616982 | 2_4:-18158918 | None:intergenic |
| TAAGAAGAAAACAATGCAGG+TGG | 0.617945 | 2_4:-18159070 | None:intergenic |
| ACCATACATTATCTTCTACA+TGG | 0.618370 | 2_4:+18161717 | Msa0318970:CDS |
| AACCCCGCAAACATCAATTG+TGG | 0.619268 | 2_4:-18163577 | None:intergenic |
| GCCTGTACCTGGAAAACAAG+GGG | 0.619950 | 2_4:-18160274 | None:intergenic |
| ACCCATTATTACTTGCACCA+TGG | 0.623569 | 2_4:+18162858 | Msa0318970:CDS |
| TGAACATCCCCGAAACCTGA+AGG | 0.626671 | 2_4:+18162893 | Msa0318970:CDS |
| CATCCATGGGGTGTTTGTGG+TGG | 0.632413 | 2_4:-18161743 | None:intergenic |
| CGGACTCCAGTTCTGGAACG+TGG | 0.633072 | 2_4:+18162758 | Msa0318970:intron |
| TCCTCATATAGCTCTGATGG+TGG | 0.637299 | 2_4:+18161252 | Msa0318970:CDS |
| CCACCAGACAGTGAGGGTCA+AGG | 0.641225 | 2_4:-18161158 | None:intergenic |
| GCGTGTTGTGTTGAGTGATG+AGG | 0.662809 | 2_4:-18158934 | None:intergenic |
| GAGCTATATGAGGACAGCTG+AGG | 0.663833 | 2_4:-18161243 | None:intergenic |
| TATTGCCCACCAGACAGTGA+GGG | 0.672832 | 2_4:-18161164 | None:intergenic |
| TAAAGCAGGAGTAGTTGAAG+GGG | 0.675171 | 2_4:-18162796 | None:intergenic |
| GTATTGCCCACCAGACAGTG+AGG | 0.692936 | 2_4:-18161165 | None:intergenic |
| TTGACAGACTGGCTGCATGG+GGG | 0.698205 | 2_4:-18158830 | None:intergenic |
| AGCCTGTACCTGGAAAACAA+GGG | 0.717048 | 2_4:-18160275 | None:intergenic |
| CAAGTCTCAAACCATCCATG+GGG | 0.739606 | 2_4:-18161755 | None:intergenic |
| GCAGTTCTCATCGCTCACGG+TGG | 0.758042 | 2_4:+18158998 | Msa0318970:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | NNNNTATTAATATTTTTTTT+AGG | + | chr2_4:18159481-18159500 | Msa0318970:intron | 0.0% |
| !! | TAAAAAAAATATATATAATT+GGG | - | chr2_4:18159955-18159974 | None:intergenic | 0.0% |
| !! | TTAAAAAAAATATATATAAT+TGG | - | chr2_4:18159956-18159975 | None:intergenic | 0.0% |
| !!! | CATAATTTTTTTTTTTGTTT+TGG | + | chr2_4:18159783-18159802 | Msa0318970:intron | 10.0% |
| !!! | TTAATTTTATGTGTAAATTT+AGG | + | chr2_4:18160368-18160387 | Msa0318970:intron | 10.0% |
| !! | AAATTGAACAAATTTAAAAA+AGG | - | chr2_4:18162124-18162143 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTTGTTCAATT+TGG | + | chr2_4:18162123-18162142 | Msa0318970:intron | 10.0% |
| !! | CTTCAAATAATAATAATTTA+AGG | + | chr2_4:18162463-18162482 | Msa0318970:intron | 10.0% |
| !! | TAAGTACTAATAATCTAATT+GGG | - | chr2_4:18159983-18160002 | None:intergenic | 15.0% |
| !!! | GATTAACACTTTTTTATTTT+TGG | + | chr2_4:18160201-18160220 | Msa0318970:intron | 15.0% |
| !!! | TTTTTGAAAGAGAATTTTTA+CGG | - | chr2_4:18160305-18160324 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTAATGTTCTAT+AGG | + | chr2_4:18160447-18160466 | Msa0318970:intron | 15.0% |
| !! | ATTGGATTTATAAAAAAACA+AGG | + | chr2_4:18160668-18160687 | Msa0318970:intron | 15.0% |
| !!! | TTTATAAAAAAACAAGGTTT+TGG | + | chr2_4:18160674-18160693 | Msa0318970:intron | 15.0% |
| !!! | TTTTCTAGTTATATAACTTT+TGG | + | chr2_4:18160965-18160984 | Msa0318970:intron | 15.0% |
| !!! | TTTCTAGTTATATAACTTTT+GGG | + | chr2_4:18160966-18160985 | Msa0318970:intron | 15.0% |
| !! | TAATGTGGTTAATTATTAAA+AGG | - | chr2_4:18161056-18161075 | None:intergenic | 15.0% |
| !!! | CAATAAAGTATTTGAAAATT+CGG | - | chr2_4:18161845-18161864 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTATTATGACAAA+TGG | + | chr2_4:18162229-18162248 | Msa0318970:intron | 15.0% |
| !!! | CAAATTATGTTTTTAAACAA+TGG | - | chr2_4:18162305-18162324 | None:intergenic | 15.0% |
| !! | CATTGTTTAAAAACATAATT+TGG | + | chr2_4:18162303-18162322 | Msa0318970:intron | 15.0% |
| !!! | TATTTGTTTTTAAAGTTGAA+TGG | + | chr2_4:18162370-18162389 | Msa0318970:intron | 15.0% |
| !!! | AATTTGTATTTAATTTCATG+TGG | + | chr2_4:18162427-18162446 | Msa0318970:intron | 15.0% |
| !!! | ATTTGTATTTAATTTCATGT+GGG | + | chr2_4:18162428-18162447 | Msa0318970:intron | 15.0% |
| !! | AATATAAATAAGATACGTAA+TGG | + | chr2_4:18163158-18163177 | Msa0318970:intron | 15.0% |
| !!! | TATTTTTTTTAGGATTGTGA+AGG | + | chr2_4:18159491-18159510 | Msa0318970:intron | 20.0% |
| !!! | GACAGAAGAAATTTTAATTT+GGG | + | chr2_4:18159709-18159728 | Msa0318970:intron | 20.0% |
| !! | GACAGTATATAATATATACA+GGG | - | chr2_4:18159882-18159901 | None:intergenic | 20.0% |
| !! | CTAAGTACTAATAATCTAAT+TGG | - | chr2_4:18159984-18160003 | None:intergenic | 20.0% |
| !! | TATGAAGAACAAAATATGTT+AGG | - | chr2_4:18160113-18160132 | None:intergenic | 20.0% |
| !! | CAATTCAATGATAAAAACAA+TGG | - | chr2_4:18160167-18160186 | None:intergenic | 20.0% |
| !!! | CATTGTTTTTATCATTGAAT+TGG | + | chr2_4:18160165-18160184 | Msa0318970:intron | 20.0% |
| !!! | TTTTGAAAGAGAATTTTTAC+GGG | - | chr2_4:18160304-18160323 | None:intergenic | 20.0% |
| !!! | TACATAACATTTGAAATCTA+AGG | - | chr2_4:18160343-18160362 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGTTCTATAGGT+TGG | + | chr2_4:18160451-18160470 | Msa0318970:intron | 20.0% |
| !!! | AGATAGCGAAATAATTTTTT+CGG | - | chr2_4:18160766-18160785 | None:intergenic | 20.0% |
| !! | TGTATATAACTCTATACAAA+TGG | + | chr2_4:18161219-18161238 | Msa0318970:CDS | 20.0% |
| !! | GTATATAACTCTATACAAAT+GGG | + | chr2_4:18161220-18161239 | Msa0318970:CDS | 20.0% |
| !!! | TTTTAATGTGGAAAAGAAAA+CGG | - | chr2_4:18161321-18161340 | None:intergenic | 20.0% |
| !!! | TAAGTTGATTTAAGAAATGT+TGG | + | chr2_4:18161401-18161420 | Msa0318970:intron | 20.0% |
| !!! | CATGTATTTTATTACGATAA+TGG | - | chr2_4:18161448-18161467 | None:intergenic | 20.0% |
| !!! | CGAATTTTCAAATACTTTAT+TGG | + | chr2_4:18161843-18161862 | Msa0318970:intron | 20.0% |
| !!! | TTTTTATCATGAATTCTTCT+TGG | + | chr2_4:18161893-18161912 | Msa0318970:intron | 20.0% |
| !! | AAAAAAACTAATTACTCTGT+TGG | - | chr2_4:18161936-18161955 | None:intergenic | 20.0% |
| !!! | ATTTGATGAAAATTTGTTGT+AGG | - | chr2_4:18162183-18162202 | None:intergenic | 20.0% |
| !! | ACTTAAATAGTAAGATTAGA+TGG | + | chr2_4:18162254-18162273 | Msa0318970:intron | 20.0% |
| !! | GTTTAAAAACATAATTTGGA+AGG | + | chr2_4:18162307-18162326 | Msa0318970:intron | 20.0% |
| !!! | CAACTTTAAAAACAAATATC+CGG | - | chr2_4:18162368-18162387 | None:intergenic | 20.0% |
| !!! | ATTTTATAACCTTCTTTGAT+AGG | + | chr2_4:18162488-18162507 | Msa0318970:intron | 20.0% |
| !!! | AACAAATAAATTGTTGTTTC+TGG | + | chr2_4:18162522-18162541 | Msa0318970:intron | 20.0% |
| !! | ATATTGACATATCTATATTG+AGG | - | chr2_4:18162666-18162685 | None:intergenic | 20.0% |
| !! | CAATATAGATATGTCAATAT+TGG | + | chr2_4:18162666-18162685 | Msa0318970:intron | 20.0% |
| !! | TCCAATAAAAATCAATGAAA+AGG | + | chr2_4:18163005-18163024 | Msa0318970:intron | 20.0% |
| !!! | TCCTTTTCATTGATTTTTAT+TGG | - | chr2_4:18163009-18163028 | None:intergenic | 20.0% |
| !!! | CTTCTATCACTTTATTTATT+TGG | + | chr2_4:18163229-18163248 | Msa0318970:intron | 20.0% |
| !!! | TTTATTTATTTGGTACCTTT+TGG | + | chr2_4:18163239-18163258 | Msa0318970:intron | 20.0% |
| !! | AATAATTAGACAGATAAAAG+AGG | - | chr2_4:18163548-18163567 | None:intergenic | 20.0% |
| ! | GTTTATTCTCTTAAATCGAA+CGG | + | chr2_4:18158875-18158894 | Msa0318970:five_prime_UTR | 25.0% |
| !! | ATTGTTTTCTTCTTACTGTT+CGG | + | chr2_4:18159078-18159097 | Msa0318970:five_prime_UTR | 25.0% |
| ! | ACGAAACAAAAATCGAAATT+AGG | - | chr2_4:18159191-18159210 | None:intergenic | 25.0% |
| !!! | TTTTGATGTATTTTTTGCAC+TGG | + | chr2_4:18159547-18159566 | Msa0318970:intron | 25.0% |
| !!! | GGACAGAAGAAATTTTAATT+TGG | + | chr2_4:18159708-18159727 | Msa0318970:intron | 25.0% |
| !! | ACATTTTAAATGTAGAGAAG+TGG | + | chr2_4:18159833-18159852 | Msa0318970:intron | 25.0% |
| !! | CATTTTAAATGTAGAGAAGT+GGG | + | chr2_4:18159834-18159853 | Msa0318970:intron | 25.0% |
| ! | TATATAATATATACAGGGCT+GGG | - | chr2_4:18159877-18159896 | None:intergenic | 25.0% |
| ! | GGACAGTATATAATATATAC+AGG | - | chr2_4:18159883-18159902 | None:intergenic | 25.0% |
| ! | ATAAATCCAATATCGTTAAC+TGG | - | chr2_4:18160659-18160678 | None:intergenic | 25.0% |
| ! | CACATGAACAATATAAGATT+AGG | - | chr2_4:18160917-18160936 | None:intergenic | 25.0% |
| !!! | GTTATATAACTTTTGGGTAA+AGG | + | chr2_4:18160972-18160991 | Msa0318970:intron | 25.0% |
| ! | TATCGTAATAAAATACATGC+CGG | + | chr2_4:18161449-18161468 | Msa0318970:intron | 25.0% |
| ! | TGTCTCACTATATAAAAAGT+GGG | + | chr2_4:18161491-18161510 | Msa0318970:intron | 25.0% |
| !!! | CATTTAACCAAAAAGCATTA+CGG | - | chr2_4:18161681-18161700 | None:intergenic | 25.0% |
| !!! | TTTTGGTTAAATGTTGCTTT+AGG | + | chr2_4:18161688-18161707 | Msa0318970:intron | 25.0% |
| !!! | TTTGGTTAAATGTTGCTTTA+GGG | + | chr2_4:18161689-18161708 | Msa0318970:intron | 25.0% |
| ! | ATATGGCAAAAAATAGATAC+CGG | - | chr2_4:18161816-18161835 | None:intergenic | 25.0% |
| ! | TGAAAATTCGGCATATAATA+TGG | - | chr2_4:18161833-18161852 | None:intergenic | 25.0% |
| ! | GAAAAAAAATTGAACCTGAT+TGG | - | chr2_4:18162161-18162180 | None:intergenic | 25.0% |
| ! | TTCATCAAATTACTCCTTTA+AGG | + | chr2_4:18162193-18162212 | Msa0318970:intron | 25.0% |
| ! | AAAGTTGAATGGTATAAGAA+TGG | + | chr2_4:18162381-18162400 | Msa0318970:intron | 25.0% |
| ! | AAAATTCCATGAAGTAATGT+TGG | + | chr2_4:18162721-18162740 | Msa0318970:intron | 25.0% |
| !! | GATTTTGCTTAGCAAAATAT+TGG | - | chr2_4:18162978-18162997 | None:intergenic | 25.0% |
| ! | TCTACTGAAATTGTAATAAC+TGG | - | chr2_4:18163053-18163072 | None:intergenic | 25.0% |
| ! | ACAATTTCAGTAGAAATTGA+AGG | + | chr2_4:18163059-18163078 | Msa0318970:intron | 25.0% |
| ! | TTGAAGACAAAGTTAAAAGA+AGG | - | chr2_4:18163140-18163159 | None:intergenic | 25.0% |
| ! | AAAAACAAGACGGAAATAAT+TGG | - | chr2_4:18163275-18163294 | None:intergenic | 25.0% |
| !!! | AATTATTTCCGTCTTGTTTT+TGG | + | chr2_4:18163274-18163293 | Msa0318970:intron | 25.0% |
| ! | AAGCATGTAAATTTACTGTT+AGG | + | chr2_4:18163477-18163496 | Msa0318970:exon | 25.0% |
| ! | AGCATGTAAATTTACTGTTA+GGG | + | chr2_4:18163478-18163497 | Msa0318970:exon | 25.0% |
| ! | ACCAAAAAATTGACGAAAAA+TGG | - | chr2_4:18163609-18163628 | None:intergenic | 25.0% |
| AGAGAATAAACTCTTCAAGA+TGG | - | chr2_4:18158866-18158885 | None:intergenic | 30.0% | |
| GCAAAATCGGATCTAAAAAT+CGG | - | chr2_4:18159125-18159144 | None:intergenic | 30.0% | |
| TGCTGAAACAAAAGCAAAAT+CGG | - | chr2_4:18159138-18159157 | None:intergenic | 30.0% | |
| TAGTAAGATGAAAACGACTA+TGG | + | chr2_4:18159650-18159669 | Msa0318970:intron | 30.0% | |
| !!! | AAAACGACTATGGTCTTTTT+TGG | + | chr2_4:18159660-18159679 | Msa0318970:intron | 30.0% |
| !! | TGTAAGGGTGTTTATTAGAT+GGG | + | chr2_4:18159687-18159706 | Msa0318970:intron | 30.0% |
| ATATAATATATACAGGGCTG+GGG | - | chr2_4:18159876-18159895 | None:intergenic | 30.0% | |
| GTATATAATATATACAGGGC+TGG | - | chr2_4:18159878-18159897 | None:intergenic | 30.0% | |
| AAAAACAATGGCAACAGTAA+TGG | - | chr2_4:18160155-18160174 | None:intergenic | 30.0% | |
| TTGAAATCTAAGGAATGACA+TGG | - | chr2_4:18160333-18160352 | None:intergenic | 30.0% | |
| !! | AACCTCATTTTGAAAGAAAC+GGG | - | chr2_4:18160536-18160555 | None:intergenic | 30.0% |
| !! | GAACCTCATTTTGAAAGAAA+CGG | - | chr2_4:18160537-18160556 | None:intergenic | 30.0% |
| ! | TGGTAAAAATGTTTAGAGCA+AGG | + | chr2_4:18160694-18160713 | Msa0318970:intron | 30.0% |
| !!! | TAATTTTTTCGGAGGAACTA+CGG | - | chr2_4:18160755-18160774 | None:intergenic | 30.0% |
| !!! | TAGCGAAATAATTTTTTCGG+AGG | - | chr2_4:18160763-18160782 | None:intergenic | 30.0% |
| !!! | CACATGTCTACTTTTTATCA+GGG | + | chr2_4:18160788-18160807 | Msa0318970:intron | 30.0% |
| AGTTTCATCATGTGAGAAAA+AGG | - | chr2_4:18160825-18160844 | None:intergenic | 30.0% | |
| AGATTAGGAGTGATTATTCA+GGG | - | chr2_4:18160902-18160921 | None:intergenic | 30.0% | |
| AAGATTAGGAGTGATTATTC+AGG | - | chr2_4:18160903-18160922 | None:intergenic | 30.0% | |
| !! | AGGTTTCCTTTGATTTTGAT+TGG | + | chr2_4:18160992-18161011 | Msa0318970:intron | 30.0% |
| AACATGCCAATCAAAATCAA+AGG | - | chr2_4:18161001-18161020 | None:intergenic | 30.0% | |
| ATCTTCATTTGCTTGTAATG+TGG | - | chr2_4:18161071-18161090 | None:intergenic | 30.0% | |
| TATACAAACCAACATACAAC+TGG | - | chr2_4:18161205-18161224 | None:intergenic | 30.0% | |
| !!! | AGTAGGTCTTTGTTTTAATG+TGG | - | chr2_4:18161333-18161352 | None:intergenic | 30.0% |
| ACATTAAAACAAAGACCTAC+TGG | + | chr2_4:18161332-18161351 | Msa0318970:CDS | 30.0% | |
| TTCATGCTATGGAAACAAAA+GGG | - | chr2_4:18161377-18161396 | None:intergenic | 30.0% | |
| TTTCATGCTATGGAAACAAA+AGG | - | chr2_4:18161378-18161397 | None:intergenic | 30.0% | |
| CAACTTATGATTTCATGCTA+TGG | - | chr2_4:18161388-18161407 | None:intergenic | 30.0% | |
| GTGTCTCACTATATAAAAAG+TGG | + | chr2_4:18161490-18161509 | Msa0318970:intron | 30.0% | |
| ! | AAGTTTACCGTAATGCTTTT+TGG | + | chr2_4:18161671-18161690 | Msa0318970:intron | 30.0% |
| !! | TTGGTTAAATGTTGCTTTAG+GGG | + | chr2_4:18161690-18161709 | Msa0318970:intron | 30.0% |
| ACCATACATTATCTTCTACA+TGG | + | chr2_4:18161717-18161736 | Msa0318970:CDS | 30.0% | |
| AATAATATAGCTGTTGCAGT+AGG | - | chr2_4:18161789-18161808 | None:intergenic | 30.0% | |
| AACAGCTATATTATTGTTCC+CGG | + | chr2_4:18161794-18161813 | Msa0318970:CDS | 30.0% | |
| TATGGCAAAAAATAGATACC+GGG | - | chr2_4:18161815-18161834 | None:intergenic | 30.0% | |
| ! | CATGAATTCTTCTTGGTAAT+AGG | + | chr2_4:18161900-18161919 | Msa0318970:intron | 30.0% |
| ! | TCTTCTTGGTAATAGGAATT+TGG | + | chr2_4:18161907-18161926 | Msa0318970:intron | 30.0% |
| !!! | TTAGTTTTTTTCCCCTCAAA+AGG | + | chr2_4:18161945-18161964 | Msa0318970:intron | 30.0% |
| !!! | TAGTTTTTTTCCCCTCAAAA+GGG | + | chr2_4:18161946-18161965 | Msa0318970:intron | 30.0% |
| ! | ACTTGAATTTTCCCTTTTGA+GGG | - | chr2_4:18161960-18161979 | None:intergenic | 30.0% |
| !!! | AAGTACAGCTTTTAAAACCT+AGG | + | chr2_4:18162005-18162024 | Msa0318970:intron | 30.0% |
| AAAACACCAACATTACTTCA+TGG | - | chr2_4:18162730-18162749 | None:intergenic | 30.0% | |
| AAAATAACAATTGTGCCAAC+TGG | - | chr2_4:18163112-18163131 | None:intergenic | 30.0% | |
| GTTTACAAGACGGAAATAAT+TGG | - | chr2_4:18163310-18163329 | None:intergenic | 30.0% | |
| AAAAACTTTATCCCAAAGTG+AGG | - | chr2_4:18163425-18163444 | None:intergenic | 30.0% | |
| !!! | TCACTTTGGGATAAAGTTTT+TGG | + | chr2_4:18163424-18163443 | Msa0318970:CDS | 30.0% |
| !!! | GCCATTTTTCGTCAATTTTT+TGG | + | chr2_4:18163605-18163624 | Msa0318970:three_prime_UTR | 30.0% |
| CTTTACAATGTGTTCACAAT+TGG | - | chr2_4:18163643-18163662 | None:intergenic | 30.0% | |
| GTAAAGTAGAATATGTTACC+AGG | + | chr2_4:18163657-18163676 | Msa0318970:three_prime_UTR | 30.0% | |
| GAAGTAAAATCACAGCAAAA+AGG | - | chr2_4:18163704-18163723 | None:intergenic | 30.0% | |
| TGATGAGGCAATGATTTAGT+GGG | - | chr2_4:18158922-18158941 | None:intergenic | 35.0% | |
| AACGTAGAAAAAGGGATTTG+GGG | - | chr2_4:18158966-18158985 | None:intergenic | 35.0% | |
| GAACGTAGAAAAAGGGATTT+GGG | - | chr2_4:18158967-18158986 | None:intergenic | 35.0% | |
| TGAACGTAGAAAAAGGGATT+TGG | - | chr2_4:18158968-18158987 | None:intergenic | 35.0% | |
| TGAGAGTGAACGTAGAAAAA+GGG | - | chr2_4:18158974-18158993 | None:intergenic | 35.0% | |
| ! | TTTTTCTACGTTCACTCTCA+CGG | + | chr2_4:18158974-18158993 | Msa0318970:five_prime_UTR | 35.0% |
| TAAGAAGAAAACAATGCAGG+TGG | - | chr2_4:18159073-18159092 | None:intergenic | 35.0% | |
| CAGTAAGAAGAAAACAATGC+AGG | - | chr2_4:18159076-18159095 | None:intergenic | 35.0% | |
| ! | TGATGACGAGTGAAAAAGTT+TGG | + | chr2_4:18159617-18159636 | Msa0318970:intron | 35.0% |
| !! | CTGTAAGGGTGTTTATTAGA+TGG | + | chr2_4:18159686-18159705 | Msa0318970:intron | 35.0% |
| ! | TTAATTTGGGACGTAAGCTT+TGG | + | chr2_4:18159722-18159741 | Msa0318970:intron | 35.0% |
| !! | CTGACTTTTTCCTACAAGAA+AGG | + | chr2_4:18160035-18160054 | Msa0318970:intron | 35.0% |
| TCAATGTCAACCTTTCTTGT+AGG | - | chr2_4:18160048-18160067 | None:intergenic | 35.0% | |
| TGACATTGATGTCATTCGAA+AGG | + | chr2_4:18160059-18160078 | Msa0318970:intron | 35.0% | |
| AAGGCATGTGAAAACAATGT+TGG | + | chr2_4:18160078-18160097 | Msa0318970:intron | 35.0% | |
| CAAATCAACTACAAAGTCCT+GGG | - | chr2_4:18160248-18160267 | None:intergenic | 35.0% | |
| TCAAATCAACTACAAAGTCC+TGG | - | chr2_4:18160249-18160268 | None:intergenic | 35.0% | |
| !! | ACCTCATTTTGAAAGAAACG+GGG | - | chr2_4:18160535-18160554 | None:intergenic | 35.0% |
| ! | CTTTCAAAATGAGGTTCTAG+AGG | + | chr2_4:18160540-18160559 | Msa0318970:CDS | 35.0% |
| CCTGATAAAAAGTAGACATG+TGG | - | chr2_4:18160790-18160809 | None:intergenic | 35.0% | |
| !!! | CCACATGTCTACTTTTTATC+AGG | + | chr2_4:18160787-18160806 | Msa0318970:intron | 35.0% |
| TCACATGATGAAACTTCACT+GGG | + | chr2_4:18160830-18160849 | Msa0318970:intron | 35.0% | |
| ! | TGCTTTGAGTAACAGCTTAT+TGG | + | chr2_4:18161632-18161651 | Msa0318970:intron | 35.0% |
| GCCATGTAGAAGATAATGTA+TGG | - | chr2_4:18161721-18161740 | None:intergenic | 35.0% | |
| ! | CTTGAATTTTCCCTTTTGAG+GGG | - | chr2_4:18161959-18161978 | None:intergenic | 35.0% |
| ! | GACTTGAATTTTCCCTTTTG+AGG | - | chr2_4:18161961-18161980 | None:intergenic | 35.0% |
| GGAAAATTCAAGTCTCACAT+TGG | + | chr2_4:18161967-18161986 | Msa0318970:intron | 35.0% | |
| !! | CCTTACAAAACGGACTAAAA+AGG | - | chr2_4:18162040-18162059 | None:intergenic | 35.0% |
| !! | CCTTTTTAGTCCGTTTTGTA+AGG | + | chr2_4:18162037-18162056 | Msa0318970:intron | 35.0% |
| TCTAACTCAGCCTTACAAAA+CGG | - | chr2_4:18162050-18162069 | None:intergenic | 35.0% | |
| CCACAGGTTTCTAATTAGAT+AGG | - | chr2_4:18162090-18162109 | None:intergenic | 35.0% | |
| CCTATCTAATTAGAAACCTG+TGG | + | chr2_4:18162087-18162106 | Msa0318970:intron | 35.0% | |
| AAAATTGAACCTGATTGGTG+AGG | - | chr2_4:18162156-18162175 | None:intergenic | 35.0% | |
| TTCGATGTGAAACTCCTTAA+AGG | - | chr2_4:18162210-18162229 | None:intergenic | 35.0% | |
| ! | TAGATGGATTCTTTGTAACG+TGG | + | chr2_4:18162270-18162289 | Msa0318970:intron | 35.0% |
| ATTTGGAAGGAAAATCACCA+TGG | + | chr2_4:18162320-18162339 | Msa0318970:intron | 35.0% | |
| TTTGGAAGGAAAATCACCAT+GGG | + | chr2_4:18162321-18162340 | Msa0318970:intron | 35.0% | |
| GTTGAATGGTATAAGAATGG+TGG | + | chr2_4:18162384-18162403 | Msa0318970:intron | 35.0% | |
| TCTTAAGCTCCTATCAAAGA+AGG | - | chr2_4:18162500-18162519 | None:intergenic | 35.0% | |
| GTGTTGTAGTAGTACAAAAC+TGG | - | chr2_4:18162577-18162596 | None:intergenic | 35.0% | |
| !! | TGTTGGTGTTTTGTATTTCG+CGG | + | chr2_4:18162738-18162757 | Msa0318970:intron | 35.0% |
| ATAAAGCAGGAGTAGTTGAA+GGG | - | chr2_4:18162800-18162819 | None:intergenic | 35.0% | |
| AATAAAGCAGGAGTAGTTGA+AGG | - | chr2_4:18162801-18162820 | None:intergenic | 35.0% | |
| ! | TCAACTACTCCTGCTTTATT+TGG | + | chr2_4:18162801-18162820 | Msa0318970:CDS | 35.0% |
| ACCATGGTGCAAGTAATAAT+GGG | - | chr2_4:18162862-18162881 | None:intergenic | 35.0% | |
| AAATTGCCATCCACAGTTAA+AGG | - | chr2_4:18162938-18162957 | None:intergenic | 35.0% | |
| CAAAATATTGGAGCAACGAA+TGG | - | chr2_4:18162966-18162985 | None:intergenic | 35.0% | |
| CTGGTTACATACACATATCT+AGG | - | chr2_4:18163093-18163112 | None:intergenic | 35.0% | |
| GATATGTGTATGTAACCAGT+TGG | + | chr2_4:18163094-18163113 | Msa0318970:intron | 35.0% | |
| AGACAAAGTTAAAAGAAGGC+AGG | - | chr2_4:18163136-18163155 | None:intergenic | 35.0% | |
| TAATGGCCAGACTTATTTGA+AGG | + | chr2_4:18163175-18163194 | Msa0318970:intron | 35.0% | |
| AATGGCCAGACTTATTTGAA+GGG | + | chr2_4:18163176-18163195 | Msa0318970:intron | 35.0% | |
| AAATTAACAACCCTTAGCAG+AGG | - | chr2_4:18163203-18163222 | None:intergenic | 35.0% | |
| ! | ATTGGTTGGTATTCTCCAAA+AGG | - | chr2_4:18163257-18163276 | None:intergenic | 35.0% |
| ACAAGACGGAAATAATTGGT+TGG | - | chr2_4:18163271-18163290 | None:intergenic | 35.0% | |
| GGTATTCTCCAAAAACAAGA+CGG | - | chr2_4:18163285-18163304 | None:intergenic | 35.0% | |
| ACAAGACGGAAATAATTGGT+TGG | - | chr2_4:18163271-18163290 | None:intergenic | 35.0% | |
| GGCTTGTATAGTTTACAAGA+CGG | - | chr2_4:18163320-18163339 | None:intergenic | 35.0% | |
| AAAACCAGGGAAAGATGATT+AGG | - | chr2_4:18163341-18163360 | None:intergenic | 35.0% | |
| TATCTTGGATCCTAAAGTGA+TGG | - | chr2_4:18163384-18163403 | None:intergenic | 35.0% | |
| !! | CACTTTAGGATCCAAGATAA+AGG | + | chr2_4:18163385-18163404 | Msa0318970:CDS | 35.0% |
| AGGATCCAAGATAAAGGATT+TGG | + | chr2_4:18163391-18163410 | Msa0318970:CDS | 35.0% | |
| GGATCCAAGATAAAGGATTT+GGG | + | chr2_4:18163392-18163411 | Msa0318970:CDS | 35.0% | |
| TGATCCCAAATCCTTTATCT+TGG | - | chr2_4:18163399-18163418 | None:intergenic | 35.0% | |
| AGAATATGTTACCAGGTTTG+TGG | + | chr2_4:18163664-18163683 | Msa0318970:three_prime_UTR | 35.0% | |
| GATGAGGCAATGATTTAGTG+GGG | - | chr2_4:18158921-18158940 | None:intergenic | 40.0% | |
| GTGATGAGGCAATGATTTAG+TGG | - | chr2_4:18158923-18158942 | None:intergenic | 40.0% | |
| GTGAGAGTGAACGTAGAAAA+AGG | - | chr2_4:18158975-18158994 | None:intergenic | 40.0% | |
| AATGCAGGTGGAATCGAAAT+CGG | - | chr2_4:18159061-18159080 | None:intergenic | 40.0% | |
| !!! | ACGACTATGGTCTTTTTTGG+TGG | + | chr2_4:18159663-18159682 | Msa0318970:intron | 40.0% |
| !!! | GTCTTTTTTGGTGGCTGTAA+GGG | + | chr2_4:18159672-18159691 | Msa0318970:intron | 40.0% |
| ! | GTTCTATAGGTTGGACATCT+TGG | + | chr2_4:18160460-18160479 | Msa0318970:intron | 40.0% |
| TTGGTGAAGCTTATGAAGAG+TGG | + | chr2_4:18160479-18160498 | Msa0318970:CDS | 40.0% | |
| TGGTGAAGCTTATGAAGAGT+GGG | + | chr2_4:18160480-18160499 | Msa0318970:CDS | 40.0% | |
| TCCCCGTTTCTTTCAAAATG+AGG | + | chr2_4:18160531-18160550 | Msa0318970:CDS | 40.0% | |
| GATACAAGACTTAGCTGTTG+TGG | - | chr2_4:18160583-18160602 | None:intergenic | 40.0% | |
| ! | CAGCTAAGTCTTGTATCACT+TGG | + | chr2_4:18160586-18160605 | Msa0318970:intron | 40.0% |
| GGTAGACCAGTTAACGATAT+TGG | + | chr2_4:18160650-18160669 | Msa0318970:intron | 40.0% | |
| CTCACATGATGAAACTTCAC+TGG | + | chr2_4:18160829-18160848 | Msa0318970:intron | 40.0% | |
| ACAACTGGAAGCCAAATAAC+TGG | - | chr2_4:18161190-18161209 | None:intergenic | 40.0% | |
| ! | TTTGGCTTCCAGTTGTATGT+TGG | + | chr2_4:18161194-18161213 | Msa0318970:CDS | 40.0% |
| ! | TGGTTCTTGGCATTTTTGTG+TGG | + | chr2_4:18161272-18161291 | Msa0318970:CDS | 40.0% |
| !!! | TGAGACACACCCTGTTTTTA+GGG | - | chr2_4:18161478-18161497 | None:intergenic | 40.0% |
| GTGGGACTTACATGATTTAG+TGG | + | chr2_4:18161509-18161528 | Msa0318970:intron | 40.0% | |
| GCTGTTACTCAAAGCAGATA+TGG | - | chr2_4:18161628-18161647 | None:intergenic | 40.0% | |
| ACAAGTCTCAAACCATCCAT+GGG | - | chr2_4:18161759-18161778 | None:intergenic | 40.0% | |
| AACAAGTCTCAAACCATCCA+TGG | - | chr2_4:18161760-18161779 | None:intergenic | 40.0% | |
| ATATAGCTGTTGCAGTAGGA+GGG | - | chr2_4:18161785-18161804 | None:intergenic | 40.0% | |
| AATATAGCTGTTGCAGTAGG+AGG | - | chr2_4:18161786-18161805 | None:intergenic | 40.0% | |
| !! | AAAACGGACTAAAAAGGCGA+GGG | - | chr2_4:18162034-18162053 | None:intergenic | 40.0% |
| AGATAGGACAGTCTTTGCTT+TGG | - | chr2_4:18162074-18162093 | None:intergenic | 40.0% | |
| TAAAGCAGGAGTAGTTGAAG+GGG | - | chr2_4:18162799-18162818 | None:intergenic | 40.0% | |
| !! | ACTACTCCTGCTTTATTTGG+CGG | + | chr2_4:18162804-18162823 | Msa0318970:CDS | 40.0% |
| ACCCATTATTACTTGCACCA+TGG | + | chr2_4:18162858-18162877 | Msa0318970:CDS | 40.0% | |
| GACCATGGTGCAAGTAATAA+TGG | - | chr2_4:18162863-18162882 | None:intergenic | 40.0% | |
| !! | TGCTTTTACCTTCAGGTTTC+GGG | - | chr2_4:18162904-18162923 | None:intergenic | 40.0% |
| !! | GTGCTTTTACCTTCAGGTTT+CGG | - | chr2_4:18162905-18162924 | None:intergenic | 40.0% |
| ATCCACAGTTAAAGGAGGAA+GGG | - | chr2_4:18162930-18162949 | None:intergenic | 40.0% | |
| ATGGCCAGACTTATTTGAAG+GGG | + | chr2_4:18163177-18163196 | Msa0318970:intron | 40.0% | |
| ACCACTTGAACCATCACTTT+AGG | + | chr2_4:18163371-18163390 | Msa0318970:CDS | 40.0% | |
| TCCTAAAGTGATGGTTCAAG+TGG | - | chr2_4:18163375-18163394 | None:intergenic | 40.0% | |
| AACACTTCCTTCCTCAAAAG+CGG | + | chr2_4:18163447-18163466 | Msa0318970:CDS | 40.0% | |
| CTGTTAGGGATAGCATATGT+TGG | + | chr2_4:18163492-18163511 | Msa0318970:three_prime_UTR | 40.0% | |
| TAGGGATAGCATATGTTGGT+TGG | + | chr2_4:18163496-18163515 | Msa0318970:three_prime_UTR | 40.0% | |
| TGCTCCACAATTGATGTTTG+CGG | + | chr2_4:18163573-18163592 | Msa0318970:three_prime_UTR | 40.0% | |
| ATATGTTACCAGGTTTGTGG+TGG | + | chr2_4:18163667-18163686 | Msa0318970:three_prime_UTR | 40.0% | |
| ATACATTTCCACCACAAACC+TGG | - | chr2_4:18163678-18163697 | None:intergenic | 40.0% | |
| GGGGTATAAGAGAGATGATC+TGG | - | chr2_4:18158902-18158921 | None:intergenic | 45.0% | |
| !!! | GGTCTTTTTTGGTGGCTGTA+AGG | + | chr2_4:18159671-18159690 | Msa0318970:intron | 45.0% |
| ATGTAGAGAAGTGGGATGTC+CGG | + | chr2_4:18159842-18159861 | Msa0318970:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | - | chr2_4:18159904-18159923 | None:intergenic | 45.0% |
| !!! | GAATAAGCCCCTTGTTTTCC+AGG | + | chr2_4:18160267-18160286 | Msa0318970:CDS | 45.0% |
| AGCCTGTACCTGGAAAACAA+GGG | - | chr2_4:18160278-18160297 | None:intergenic | 45.0% | |
| AAGCCTGTACCTGGAAAACA+AGG | - | chr2_4:18160279-18160298 | None:intergenic | 45.0% | |
| TCATCAGCCCATTGTTAGCA+AGG | + | chr2_4:18160504-18160523 | Msa0318970:CDS | 45.0% | |
| GGACCTTCCTTGCTAACAAT+GGG | - | chr2_4:18160514-18160533 | None:intergenic | 45.0% | |
| GGTGGGCAATACCAGTTATT+TGG | + | chr2_4:18161176-18161195 | Msa0318970:CDS | 45.0% | |
| !! | CTGTCCTCATATAGCTCTGA+TGG | + | chr2_4:18161249-18161268 | Msa0318970:CDS | 45.0% |
| !! | TCCTCATATAGCTCTGATGG+TGG | + | chr2_4:18161252-18161271 | Msa0318970:CDS | 45.0% |
| ACCACCATCAGAGCTATATG+AGG | - | chr2_4:18161256-18161275 | None:intergenic | 45.0% | |
| !! | ATAGCTCTGATGGTGGTTCT+TGG | + | chr2_4:18161259-18161278 | Msa0318970:CDS | 45.0% |
| CAGAGAGAGATCTAACCAGT+AGG | - | chr2_4:18161350-18161369 | None:intergenic | 45.0% | |
| !! | ATGCCGGTTTCCCTAAAAAC+AGG | + | chr2_4:18161465-18161484 | Msa0318970:intron | 45.0% |
| !! | TGCCGGTTTCCCTAAAAACA+GGG | + | chr2_4:18161466-18161485 | Msa0318970:intron | 45.0% |
| !!! | CACCCTGTTTTTAGGGAAAC+CGG | - | chr2_4:18161471-18161490 | None:intergenic | 45.0% |
| !! | GTGAGACACACCCTGTTTTT+AGG | - | chr2_4:18161479-18161498 | None:intergenic | 45.0% |
| CAAGTCTCAAACCATCCATG+GGG | - | chr2_4:18161758-18161777 | None:intergenic | 45.0% | |
| !! | CAAAACGGACTAAAAAGGCG+AGG | - | chr2_4:18162035-18162054 | None:intergenic | 45.0% |
| AAAGGATGACTGACATCCAC+AGG | - | chr2_4:18162106-18162125 | None:intergenic | 45.0% | |
| AATCACCATGGGCACAACAT+TGG | + | chr2_4:18162332-18162351 | Msa0318970:intron | 45.0% | |
| ! | CAACATTGGCTGTTTGAAGC+CGG | + | chr2_4:18162346-18162365 | Msa0318970:intron | 45.0% |
| TTTATTTGGCGGTGGCTTAC+TGG | + | chr2_4:18162815-18162834 | Msa0318970:CDS | 45.0% | |
| TTATTTGGCGGTGGCTTACT+GGG | + | chr2_4:18162816-18162835 | Msa0318970:CDS | 45.0% | |
| TTTCGGGGATGTTCAGTCTT+TGG | - | chr2_4:18162888-18162907 | None:intergenic | 45.0% | |
| !! | GCTTTTACCTTCAGGTTTCG+GGG | - | chr2_4:18162903-18162922 | None:intergenic | 45.0% |
| !!! | AGGGAAGTGCTTTTACCTTC+AGG | - | chr2_4:18162911-18162930 | None:intergenic | 45.0% |
| TTCCCTTCCTCCTTTAACTG+TGG | + | chr2_4:18162925-18162944 | Msa0318970:intron | 45.0% | |
| CATCCACAGTTAAAGGAGGA+AGG | - | chr2_4:18162931-18162950 | None:intergenic | 45.0% | |
| CTTCCTCCTTTAACTGTGGA+TGG | + | chr2_4:18162929-18162948 | Msa0318970:intron | 45.0% | |
| TTGCCATCCACAGTTAAAGG+AGG | - | chr2_4:18162935-18162954 | None:intergenic | 45.0% | |
| CAAGCCTAATCATCTTTCCC+TGG | + | chr2_4:18163334-18163353 | Msa0318970:intron | 45.0% | |
| GGTACTTCTGCAGAAAACCA+GGG | - | chr2_4:18163354-18163373 | None:intergenic | 45.0% | |
| TGGTACTTCTGCAGAAAACC+AGG | - | chr2_4:18163355-18163374 | None:intergenic | 45.0% | |
| TTGGGATCACTTCCTCACTT+TGG | + | chr2_4:18163410-18163429 | Msa0318970:CDS | 45.0% | |
| TGGGATCACTTCCTCACTTT+GGG | + | chr2_4:18163411-18163430 | Msa0318970:CDS | 45.0% | |
| !! | TTAGCATCCGCTTTTGAGGA+AGG | - | chr2_4:18163457-18163476 | None:intergenic | 45.0% |
| !! | GCTTTTAGCATCCGCTTTTG+AGG | - | chr2_4:18163461-18163480 | None:intergenic | 45.0% |
| GCTCCACAATTGATGTTTGC+GGG | + | chr2_4:18163574-18163593 | Msa0318970:three_prime_UTR | 45.0% | |
| CTCCACAATTGATGTTTGCG+GGG | + | chr2_4:18163575-18163594 | Msa0318970:three_prime_UTR | 45.0% | |
| AACCCCGCAAACATCAATTG+TGG | - | chr2_4:18163580-18163599 | None:intergenic | 45.0% | |
| !!! | TAAAAAAACAATTATTATTT+TGG | - | chr2_4:18163728-18163747 | None:intergenic | 5.0% |
| GAATCTAGCCGTTGACAGAC+TGG | - | chr2_4:18158844-18158863 | None:intergenic | 50.0% | |
| GCGTGTTGTGTTGAGTGATG+AGG | - | chr2_4:18158937-18158956 | None:intergenic | 50.0% | |
| TGGTCAAGTAGTCGAGTGTC+TGG | + | chr2_4:18159803-18159822 | Msa0318970:intron | 50.0% | |
| TGTAGAGAAGTGGGATGTCC+GGG | + | chr2_4:18159843-18159862 | Msa0318970:intron | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+AGG | + | chr2_4:18159905-18159924 | Msa0318970:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACA+GGG | + | chr2_4:18159906-18159925 | Msa0318970:intron | 50.0% | |
| TTTGGCGTTCAGCACCAAGA+TGG | + | chr2_4:18160219-18160238 | Msa0318970:intron | 50.0% | |
| AAAGTCCTGGGCAACCATCT+TGG | - | chr2_4:18160236-18160255 | None:intergenic | 50.0% | |
| GCCTGTACCTGGAAAACAAG+GGG | - | chr2_4:18160277-18160296 | None:intergenic | 50.0% | |
| ! | TTACGGGTTAAGCCTGTACC+TGG | - | chr2_4:18160288-18160307 | None:intergenic | 50.0% |
| CAGCCCATTGTTAGCAAGGA+AGG | + | chr2_4:18160508-18160527 | Msa0318970:CDS | 50.0% | |
| GGGACCTTCCTTGCTAACAA+TGG | - | chr2_4:18160515-18160534 | None:intergenic | 50.0% | |
| !! | TGTATCACTTGGTGTACGCG+TGG | + | chr2_4:18160597-18160616 | Msa0318970:intron | 50.0% |
| !! | GTATCACTTGGTGTACGCGT+GGG | + | chr2_4:18160598-18160617 | Msa0318970:intron | 50.0% |
| !! | TATCACTTGGTGTACGCGTG+GGG | + | chr2_4:18160599-18160618 | Msa0318970:intron | 50.0% |
| TATTGCCCACCAGACAGTGA+GGG | - | chr2_4:18161167-18161186 | None:intergenic | 50.0% | |
| GAGCTATATGAGGACAGCTG+AGG | - | chr2_4:18161246-18161265 | None:intergenic | 50.0% | |
| ! | AACCATCCATGGGGTGTTTG+TGG | - | chr2_4:18161749-18161768 | None:intergenic | 50.0% |
| TAAAAAGGCGAGGGTTGCCT+AGG | - | chr2_4:18162025-18162044 | None:intergenic | 50.0% | |
| GGTTTCTCACCTCACCAATC+AGG | + | chr2_4:18162144-18162163 | Msa0318970:intron | 50.0% | |
| AACAGCCAATGTTGTGCCCA+TGG | - | chr2_4:18162340-18162359 | None:intergenic | 50.0% | |
| TATTTCGCGGACTCCAGTTC+TGG | + | chr2_4:18162751-18162770 | Msa0318970:intron | 50.0% | |
| !! | ACTCCTGCTTTATTTGGCGG+TGG | + | chr2_4:18162807-18162826 | Msa0318970:CDS | 50.0% |
| AAGCCACCGCCAAATAAAGC+AGG | - | chr2_4:18162813-18162832 | None:intergenic | 50.0% | |
| GTTCAGTCTTTGGCTGACCA+TGG | - | chr2_4:18162878-18162897 | None:intergenic | 50.0% | |
| TGAACATCCCCGAAACCTGA+AGG | + | chr2_4:18162893-18162912 | Msa0318970:CDS | 50.0% | |
| GAGGCCCCTTCAAATAAGTC+TGG | - | chr2_4:18163184-18163203 | None:intergenic | 50.0% | |
| ATTTGAAGGGGCCTCTGCTA+AGG | + | chr2_4:18163189-18163208 | Msa0318970:intron | 50.0% | |
| TTTGAAGGGGCCTCTGCTAA+GGG | + | chr2_4:18163190-18163209 | Msa0318970:intron | 50.0% | |
| ! | TTGACAGACTGGCTGCATGG+GGG | - | chr2_4:18158833-18158852 | None:intergenic | 55.0% |
| ! | GTTGACAGACTGGCTGCATG+GGG | - | chr2_4:18158834-18158853 | None:intergenic | 55.0% |
| ! | CGTTGACAGACTGGCTGCAT+GGG | - | chr2_4:18158835-18158854 | None:intergenic | 55.0% |
| CCATGCAGCCAGTCTGTCAA+CGG | + | chr2_4:18158833-18158852 | Msa0318970:five_prime_UTR | 55.0% | |
| GTAGAGAAGTGGGATGTCCG+GGG | + | chr2_4:18159844-18159863 | Msa0318970:intron | 55.0% | |
| CCCTGTGAGCTTAGCTCAGT+TGG | - | chr2_4:18159909-18159928 | None:intergenic | 55.0% | |
| !!! | GCCCCTTGTTTTCCAGGTAC+AGG | + | chr2_4:18160273-18160292 | Msa0318970:intron | 55.0% |
| !! | ATCACTTGGTGTACGCGTGG+GGG | + | chr2_4:18160600-18160619 | Msa0318970:intron | 55.0% |
| GGAGATTGCTAGGCTAGGCT+AGG | + | chr2_4:18160624-18160643 | Msa0318970:intron | 55.0% | |
| TTGCTAGGCTAGGCTAGGCT+AGG | + | chr2_4:18160629-18160648 | Msa0318970:intron | 55.0% | |
| AGTCCTTGACCCTCACTGTC+TGG | + | chr2_4:18161155-18161174 | Msa0318970:intron | 55.0% | |
| CTTGACCCTCACTGTCTGGT+GGG | + | chr2_4:18161159-18161178 | Msa0318970:CDS | 55.0% | |
| GTATTGCCCACCAGACAGTG+AGG | - | chr2_4:18161168-18161187 | None:intergenic | 55.0% | |
| ! | CATCCATGGGGTGTTTGTGG+TGG | - | chr2_4:18161746-18161765 | None:intergenic | 55.0% |
| CACCACAAACACCCCATGGA+TGG | + | chr2_4:18161744-18161763 | Msa0318970:CDS | 55.0% | |
| GCTTCACCACGTTCCAGAAC+TGG | - | chr2_4:18162767-18162786 | None:intergenic | 55.0% | |
| AGCAGGAGTAGTTGAAGGGG+TGG | - | chr2_4:18162796-18162815 | None:intergenic | 55.0% | |
| ! | CCGTTGACAGACTGGCTGCA+TGG | - | chr2_4:18158836-18158855 | None:intergenic | 60.0% |
| GGCGCAGTTCTCATCGCTCA+CGG | + | chr2_4:18158995-18159014 | Msa0318970:five_prime_UTR | 60.0% | |
| GCAGTTCTCATCGCTCACGG+TGG | + | chr2_4:18158998-18159017 | Msa0318970:five_prime_UTR | 60.0% | |
| !! | GATCGAAGAAGCGCCGTGCA+CGG | - | chr2_4:18159033-18159052 | None:intergenic | 60.0% |
| CAGCACCAAGATGGTTGCCC+AGG | + | chr2_4:18160228-18160247 | Msa0318970:intron | 60.0% | |
| GGGGTGGAGATTGCTAGGCT+AGG | + | chr2_4:18160619-18160638 | Msa0318970:intron | 60.0% | |
| CCACCAGACAGTGAGGGTCA+AGG | - | chr2_4:18161161-18161180 | None:intergenic | 60.0% | |
| CCTTGACCCTCACTGTCTGG+TGG | + | chr2_4:18161158-18161177 | Msa0318970:CDS | 60.0% | |
| CTGCCACCACAAACACCCCA+TGG | + | chr2_4:18161740-18161759 | Msa0318970:CDS | 60.0% | |
| !! | CGGACTCCAGTTCTGGAACG+TGG | + | chr2_4:18162758-18162777 | Msa0318970:intron | 60.0% |
| GTGGTTCTCGCTGCCGTGCA+CGG | + | chr2_4:18159017-18159036 | Msa0318970:five_prime_UTR | 65.0% | |
| CAGGGCTGGGGTTTCAACCC+CGG | - | chr2_4:18159864-18159883 | None:intergenic | 65.0% | |
| !! | ACTTGGTGTACGCGTGGGGG+TGG | + | chr2_4:18160603-18160622 | Msa0318970:intron | 65.0% |
| GCGTGGGGGTGGAGATTGCT+AGG | + | chr2_4:18160614-18160633 | Msa0318970:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 18158817 | 18163756 | 18158817 | ID=Msa0318970;Name=Msa0318970 |
| chr2_4 | mRNA | 18158817 | 18163756 | 18158817 | ID=Msa0318970-mRNA-1;Parent=Msa0318970;Name=Msa0318970-mRNA-1;_AED=0.14;_eAED=0.14;_QI=290|1|1|1|0.83|0.71|7|270|237 |
| chr2_4 | exon | 18158817 | 18159099 | 18158817 | ID=Msa0318970-mRNA-1:exon:6775;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18160231 | 18160288 | 18160231 | ID=Msa0318970-mRNA-1:exon:6776;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18160469 | 18160561 | 18160469 | ID=Msa0318970-mRNA-1:exon:6777;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18161157 | 18161353 | 18161157 | ID=Msa0318970-mRNA-1:exon:6778;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18161710 | 18161815 | 18161710 | ID=Msa0318970-mRNA-1:exon:6779;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18162768 | 18162914 | 18162768 | ID=Msa0318970-mRNA-1:exon:6780;Parent=Msa0318970-mRNA-1 |
| chr2_4 | exon | 18163367 | 18163756 | 18163367 | ID=Msa0318970-mRNA-1:exon:6781;Parent=Msa0318970-mRNA-1 |
| chr2_4 | five_prime_UTR | 18158817 | 18159099 | 18158817 | ID=Msa0318970-mRNA-1:five_prime_utr;Parent=Msa0318970-mRNA-1 |
| chr2_4 | five_prime_UTR | 18160231 | 18160237 | 18160231 | ID=Msa0318970-mRNA-1:five_prime_utr;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18160238 | 18160288 | 18160238 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18160469 | 18160561 | 18160469 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18161157 | 18161353 | 18161157 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18161710 | 18161815 | 18161710 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18162768 | 18162914 | 18162768 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | CDS | 18163367 | 18163486 | 18163367 | ID=Msa0318970-mRNA-1:cds;Parent=Msa0318970-mRNA-1 |
| chr2_4 | three_prime_UTR | 18163487 | 18163756 | 18163487 | ID=Msa0318970-mRNA-1:three_prime_utr;Parent=Msa0318970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
