AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0124320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124320 MtrunA17_Chr1g0185241 95.768 1796 76 0 106 1901 1 1796 0.0 3424
Msa0124320 MtrunA17_Chr7g0260161 66.403 1137 365 6 109 1240 2 1126 0.0 1412
Msa0124320 MtrunA17_Chr1g0204981 40.190 1794 1004 17 109 1875 2 1753 0.0 1090
Msa0124320 MtrunA17_Chr5g0394641 35.197 1824 988 23 109 1901 2 1662 0.0 869
Msa0124320 MtrunA17_Chr5g0432781 75.862 87 21 0 115 201 16 102 6.80e-40 158
Msa0124320 MtrunA17_Chr5g0412211 58.120 117 43 1 120 236 10 120 3.42e-39 160
Msa0124320 MtrunA17_Chr8g0367521 50.427 117 52 1 120 236 10 120 8.74e-34 142
Msa0124320 MtrunA17_Chr5g0427501 56.000 100 44 0 120 219 10 109 1.67e-32 138
Msa0124320 MtrunA17_Chr3g0132861 33.333 360 165 15 129 457 14 329 5.13e-27 120
Msa0124320 MtrunA17_Chr7g0268631 54.945 91 38 2 121 208 53 143 1.96e-25 110
Msa0124320 MtrunA17_Chr1g0196081 52.174 92 43 1 106 196 1 92 6.24e-24 108
Msa0124320 MtrunA17_Chr3g0107891 26.824 425 243 13 143 556 15 382 1.15e-20 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124320 AT1G03080.3 46.641 1801 869 17 113 1897 6 1730 0.0 1363
Msa0124320 AT1G03080.1 46.641 1801 869 17 113 1897 6 1730 0.0 1363
Msa0124320 AT1G03080.2 46.641 1801 869 17 113 1897 6 1730 0.0 1363
Msa0124320 AT3G22790.1 38.119 1818 997 22 109 1895 2 1722 0.0 1001
Msa0124320 AT3G22790.3 38.119 1818 997 22 109 1895 2 1722 0.0 1001
Msa0124320 AT3G22790.2 38.119 1818 997 22 109 1895 2 1722 0.0 1001
Msa0124320 AT4G14760.4 36.048 1817 1026 27 109 1899 2 1708 0.0 925
Msa0124320 AT4G14760.2 36.048 1817 1026 27 109 1899 2 1708 0.0 925
Msa0124320 AT4G14760.3 36.048 1817 1026 27 109 1899 2 1708 0.0 925
Msa0124320 AT4G14760.1 36.048 1817 1026 27 109 1899 2 1708 0.0 925
Msa0124320 AT4G02710.1 50.909 605 256 6 114 709 7 579 1.19e-174 561
Msa0124320 AT4G02710.1 29.833 838 414 28 1126 1897 379 1108 1.59e-55 213
Msa0124320 AT1G09720.1 32.426 404 210 12 120 516 10 357 2.02e-37 154
Msa0124320 AT2G22560.1 61.165 103 40 0 120 222 10 112 3.24e-37 153
Msa0124320 AT5G10500.1 43.529 170 77 5 120 277 10 172 1.11e-36 151
Msa0124320 AT1G58215.1 35.521 259 135 5 120 378 10 236 1.65e-36 151
Msa0124320 AT2G30500.2 65.169 89 31 0 116 204 17 105 3.74e-35 142
Msa0124320 AT2G30500.1 65.169 89 31 0 116 204 17 105 3.74e-35 142
Msa0124320 AT2G30500.3 65.169 89 31 0 116 204 16 104 4.35e-35 142
Msa0124320 AT5G58320.1 67.073 82 27 0 122 203 23 104 8.23e-32 133
Msa0124320 AT5G58320.4 67.073 82 27 0 122 203 23 104 8.23e-32 133
Msa0124320 AT5G58320.5 67.073 82 27 0 122 203 23 104 9.90e-32 133
Msa0124320 AT5G58320.2 67.073 82 27 0 122 203 23 104 9.90e-32 133
Msa0124320 AT1G03470.2 54.444 90 40 1 122 210 8 97 5.28e-25 107
Msa0124320 AT1G03470.3 54.444 90 40 1 122 210 8 97 5.28e-25 107
Msa0124320 AT1G03470.1 54.444 90 40 1 122 210 8 97 5.28e-25 107
Msa0124320 AT1G03470.4 54.444 90 40 1 122 210 8 97 5.28e-25 107
Msa0124320 AT2G47920.2 52.941 85 40 0 122 206 11 95 8.72e-25 105
Msa0124320 AT2G47920.1 52.941 85 40 0 122 206 11 95 8.72e-25 105
Msa0124320 AT5G58320.3 65.574 61 21 0 143 203 1 61 3.34e-19 93.2
Msa0124320 AT4G03153.1 37.179 78 44 2 122 194 7 84 3.92e-12 68.2

Find 369 sgRNAs with CRISPR-Local

Find 604 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCCTTCACGTACATTTC+TGG 0.115044 1_3:-52029452 Msa0124320:CDS
TGACAAAATTATTTCTAAAT+TGG 0.144547 1_3:-52027070 Msa0124320:CDS
CGTGAAGGGTGGCGTGTTTC+TGG 0.149213 1_3:+52029463 None:intergenic
CCGACTTTGATCGGCCATTT+TGG 0.177913 1_3:+52024409 None:intergenic
TTTGGCAAGGGCTTTCTTTA+AGG 0.184761 1_3:+52029153 None:intergenic
TCATTTCAGACTCCAATTTC+TGG 0.189196 1_3:+52025951 None:intergenic
TTTCAGTTGTGGCTTGTAAT+TGG 0.194109 1_3:+52027643 None:intergenic
ATAATCCTTTCCTTAATTTC+TGG 0.195001 1_3:-52024084 Msa0124320:three_prime_UTR
GCTTAGTTTCTTCAAGTTCT+TGG 0.200127 1_3:+52025918 None:intergenic
AACAGAAAATGGGGAGTTTA+AGG 0.200914 1_3:-52025147 Msa0124320:CDS
AAAGGAGATTGAACAGAAAA+TGG 0.204127 1_3:-52025158 Msa0124320:CDS
ACTGGCTCTTATGGTAAAAT+TGG 0.208254 1_3:-52027835 Msa0124320:CDS
TGAACAGAAGTGTCTTCTTT+TGG 0.240171 1_3:-52028477 Msa0124320:CDS
CTCGGAAAATAACAACCTTT+TGG 0.259509 1_3:-52027607 Msa0124320:CDS
AGCAAGTTGGAAGGTGAAAA+TGG 0.270031 1_3:-52025677 Msa0124320:CDS
TTTGTCTATACAAACTTTGC+AGG 0.281682 1_3:-52028117 Msa0124320:CDS
AAAGAAAGCCCTTGCCAAAT+TGG 0.283355 1_3:-52029149 Msa0124320:CDS
AGACAACAAGAGTAGGGTTT+TGG 0.287245 1_3:-52024819 Msa0124320:CDS
AGATGAGAAACTGGCTCTTA+TGG 0.298270 1_3:-52027844 Msa0124320:CDS
AGTTGAGTGCCAGAGACTTT+TGG 0.300898 1_3:-52027109 Msa0124320:CDS
AGCACTTCAATCTCAGTTAC+AGG 0.301238 1_3:+52025115 None:intergenic
ATCTCAGTTACAGGATTATC+TGG 0.302699 1_3:+52025124 None:intergenic
CTCTGCAATGCTCTTCCCTT+TGG 0.304252 1_3:+52027316 None:intergenic
GGAAACCATGGAGAAGCTTT+TGG 0.306581 1_3:-52027814 Msa0124320:CDS
AAGGGAGTCGTCACTTAAAA+AGG 0.310090 1_3:-52027367 Msa0124320:CDS
AATCACCAATACAATGAAAA+TGG 0.310983 1_3:-52025334 Msa0124320:CDS
ATGCATTAAACCAGAAATTA+AGG 0.311862 1_3:+52024074 None:intergenic
GTCTTGTTCAAAGCAGAATT+AGG 0.315384 1_3:+52029367 None:intergenic
CATACCTGATTGGTTGAACT+TGG 0.316379 1_3:+52030870 None:intergenic
TGATCAAGCATGATGTCTTT+TGG 0.316570 1_3:+52025091 None:intergenic
GACCAAGCTGTTTAAGTTCC+TGG 0.318841 1_3:+52026380 None:intergenic
CCTCCTCGTATTCTTGTTCC+CGG 0.321840 1_3:+52027220 None:intergenic
ACAGTCTGAATTACAGTCTT+TGG 0.323979 1_3:-52028435 Msa0124320:CDS
ATTCTAGGAGAATGTATTCT+TGG 0.328024 1_3:-52030570 Msa0124320:CDS
GCGCCCAGAGCTTATGAAAA+TGG 0.333667 1_3:-52029656 Msa0124320:CDS
ATCAATTTGTAATTCCTTGT+TGG 0.333975 1_3:+52027266 None:intergenic
TCTCATTTCAACATTGGCTT+TGG 0.334784 1_3:+52025195 None:intergenic
TTGCCTCTTCATGTCTTTCA+AGG 0.336649 1_3:-52030660 Msa0124320:CDS
AAAAGCGGAGGCAGAAATTT+CGG 0.343350 1_3:-52029176 Msa0124320:CDS
TGATCCTCCTCTGCAGGTCT+TGG 0.345492 1_3:+52025257 None:intergenic
AGAGCAGTTTGAAGCTTCTC+AGG 0.354328 1_3:-52024672 Msa0124320:CDS
GCAGAAGTGTATCCAAGATT+TGG 0.357411 1_3:-52027154 Msa0124320:CDS
TGGCTCCAAGAAAATCTTAC+AGG 0.359859 1_3:-52030511 Msa0124320:intron
CGTTTGCGGGATTATCTCTA+TGG 0.360101 1_3:-52024380 Msa0124320:CDS
CTCGGAGACATTATCAAAAC+TGG 0.360801 1_3:-52028750 Msa0124320:CDS
CTCGGCCTCATGCAGATTCT+AGG 0.361327 1_3:-52030585 Msa0124320:CDS
TGAATTGGAACTAATGCATT+TGG 0.362141 1_3:-52027403 Msa0124320:CDS
TCCTTGGTGGAAAAGGAGTT+GGG 0.363324 1_3:-52024890 Msa0124320:CDS
TAACGAGAAGCAGAAAGAAT+TGG 0.364874 1_3:-52028381 Msa0124320:CDS
AAGTGAAGTGAACCAGAAAT+TGG 0.366159 1_3:-52025963 Msa0124320:CDS
TTCAGTTGTGGCTTGTAATT+GGG 0.366690 1_3:+52027644 None:intergenic
ATGAACTTAAGAATCTTTCC+AGG 0.368235 1_3:-52033704 Msa0124320:intron
TTCTTTCTCTGAAAAGATAC+TGG 0.370651 1_3:+52027488 None:intergenic
TCTGCAATGCTCTTCCCTTT+GGG 0.370955 1_3:+52027317 None:intergenic
GTCTCATGGAATCGAAACTA+TGG 0.372633 1_3:+52024272 None:intergenic
AAAGAGCCACAACAACTTAC+AGG 0.374862 1_3:-52026569 Msa0124320:CDS
TTTCTTCATCAAATCTTGTA+TGG 0.375447 1_3:+52024751 None:intergenic
AATGCAAATGCTGAAGAGTT+TGG 0.375718 1_3:+52028297 None:intergenic
GAAAGATTCTTAAGTTCATA+AGG 0.377137 1_3:+52033708 None:intergenic
AGCTTCAAACTGCTCTTTAA+CGG 0.377342 1_3:+52024679 None:intergenic
CTAATGCATTTGGAACTAAA+AGG 0.378484 1_3:-52027393 Msa0124320:CDS
CTGAGAAAATTAAAATACTA+AGG 0.379706 1_3:-52027005 Msa0124320:CDS
CACAGTAAAGTGGAAATACT+AGG 0.379881 1_3:-52028233 Msa0124320:CDS
CAAATTAGAAAGTGAAGAAA+TGG 0.382537 1_3:-52026293 Msa0124320:CDS
GGCCTTACACATGCACAAAA+AGG 0.383586 1_3:+52024320 None:intergenic
TGAAAAGCAACACAGTGAAT+TGG 0.385151 1_3:-52027418 Msa0124320:CDS
GCTTCAGTATCAGCAGAGTT+TGG 0.386532 1_3:-52029104 Msa0124320:CDS
AAGCAAAGAGAAAACCAAAA+TGG 0.387448 1_3:-52024423 Msa0124320:CDS
CTCAGCATTCAAGTCTGAAA+TGG 0.388959 1_3:+52027767 None:intergenic
ATCATCACAGGAATTTGATT+AGG 0.395077 1_3:+52029535 None:intergenic
GAATGATTGTGTTACATCTC+TGG 0.397164 1_3:-52025606 Msa0124320:CDS
ACAGAAGATTGCGGCAGAAC+CGG 0.397763 1_3:-52024975 Msa0124320:CDS
AAGTCGGAGAGTACGTTTGC+GGG 0.402704 1_3:-52024393 Msa0124320:CDS
CAGAAATCAATCACCCTTAG+TGG 0.404390 1_3:+52024295 None:intergenic
AAAGGTATTGGAAAAGAATC+AGG 0.405822 1_3:-52026683 Msa0124320:CDS
TGAAATTGAAGCTTTGAAGT+TGG 0.407629 1_3:-52028660 Msa0124320:CDS
ATCAATTGACTTGTCAGATT+AGG 0.409144 1_3:-52026201 Msa0124320:CDS
AATAGAGTTCCAAAAGGTAT+TGG 0.411187 1_3:-52026695 Msa0124320:CDS
AAGATCCCGACCCTCTACTA+TGG 0.413196 1_3:-52033820 Msa0124320:CDS
CTTGGAGAAAATAACCAATC+TGG 0.413296 1_3:-52028918 Msa0124320:CDS
GTCAATGAAACACTGCTTCA+AGG 0.413357 1_3:-52025791 Msa0124320:CDS
TGAAGATCTGAGTGAGGAGA+AGG 0.413615 1_3:-52026497 Msa0124320:CDS
AATAAATGAGATTGAACAAT+GGG 0.414358 1_3:-52025858 Msa0124320:CDS
TAAGTCCCAAGAACTCAAAA+TGG 0.415777 1_3:-52030531 Msa0124320:CDS
AGGAGATTCCTTGGTGGAAA+AGG 0.418420 1_3:-52024897 Msa0124320:CDS
CTTGGAGATAATTTCCAGTC+TGG 0.418588 1_3:-52028582 Msa0124320:CDS
TGTCAGCAGGAGGAGAGTTT+CGG 0.420215 1_3:-52024540 Msa0124320:CDS
GATTTAGATCCACAATGCTT+TGG 0.420477 1_3:-52027930 Msa0124320:CDS
GCATTTGCATTCTCAATCTC+AGG 0.422576 1_3:-52028285 Msa0124320:CDS
TCTCCAAGCATTGCTGATAT+CGG 0.423431 1_3:+52028597 None:intergenic
AAATCCAAGTTCAACCAATC+AGG 0.429129 1_3:-52030874 Msa0124320:intron
ATATCTGAATGTTCATCATA+TGG 0.430778 1_3:-52025067 Msa0124320:CDS
ATGTTTGTTGTATGTTTCCT+TGG 0.431712 1_3:+52024925 None:intergenic
GGTCCTTGTCTGAGGACAAT+TGG 0.433769 1_3:+52026011 None:intergenic
CAGCAAAGAGTTCTGCAGCC+TGG 0.434765 1_3:+52025831 None:intergenic
GGAGGACAGATTGAAGATAA+TGG 0.437055 1_3:-52026320 Msa0124320:CDS
AGCAAAGAGTTCTGCAGCCT+GGG 0.440991 1_3:+52025832 None:intergenic
ACAAGAATACGAGGAGGAAC+TGG 0.441470 1_3:-52027214 Msa0124320:CDS
TCATTCAAAGCACTGATAGC+TGG 0.441799 1_3:+52025623 None:intergenic
GACAATAGAGAAACTTGAAC+AGG 0.441947 1_3:-52028072 Msa0124320:CDS
ATAGTACATTTCCGCTCTCC+TGG 0.442846 1_3:+52029684 None:intergenic
AATCTTGTATGGTTATTTGA+AGG 0.446085 1_3:+52024762 None:intergenic
TCGAACAAGGTCCTGCTTCA+AGG 0.446933 1_3:+52028817 None:intergenic
CCCTCTTAGTACATCAAGTT+CGG 0.447589 1_3:+52027560 None:intergenic
AACGAGAAGCAGAAAGAATT+GGG 0.448624 1_3:-52028380 Msa0124320:CDS
ACATACAACAAACATCCTTC+AGG 0.449082 1_3:-52024917 Msa0124320:CDS
GAGGGTGCACTGTCTTCAGC+TGG 0.450914 1_3:-52024596 Msa0124320:CDS
CCATATACATGGAAAACTTA+AGG 0.454021 1_3:-52026893 Msa0124320:CDS
CGAGAACATGCAAAGTTTGA+AGG 0.456022 1_3:-52029310 Msa0124320:CDS
ACTAAGGGTTGGGCTGCATC+AGG 0.456344 1_3:-52026989 Msa0124320:CDS
AATCCGAGGAGAATGTTAGA+AGG 0.457192 1_3:-52028712 Msa0124320:CDS
AGAAAGAATTGGGTAAACTT+TGG 0.459899 1_3:-52028370 Msa0124320:CDS
TGGATGCCTCCAAAAGTCTC+TGG 0.460089 1_3:+52027100 None:intergenic
GGTGTTCAACTCTGAAACTA+AGG 0.460564 1_3:+52027464 None:intergenic
ACAGTCTTTGGCACACAAGA+TGG 0.460791 1_3:-52028423 Msa0124320:CDS
AATCTCTCTCATTTCAACAT+TGG 0.461008 1_3:+52025189 None:intergenic
TGGAAGTCGAGGAGAGGATC+TGG 0.462169 1_3:+52025277 None:intergenic
TTCCTTGGTGGAAAAGGAGT+TGG 0.465144 1_3:-52024891 Msa0124320:CDS
TCTTCAGTACCAGGAATGCT+TGG 0.465314 1_3:-52028936 Msa0124320:CDS
AAGGGACATGTTGTGTCAAA+AGG 0.465459 1_3:-52026173 Msa0124320:CDS
TTCATCTTCCAATTTGGCAA+GGG 0.465948 1_3:+52029141 None:intergenic
AGAAATTTACTGTCTTAAAG+AGG 0.466254 1_3:-52028009 Msa0124320:CDS
TTCAGACTTGAATGCTGAGT+TGG 0.467174 1_3:-52027763 Msa0124320:CDS
ACGTACTCTCCGACTTTGAT+CGG 0.469466 1_3:+52024400 None:intergenic
GAGAGATATGATCATGCAAC+TGG 0.470348 1_3:-52029598 Msa0124320:CDS
AAGCAAAGGAGAAGAGAGAA+TGG 0.471002 1_3:-52026644 Msa0124320:CDS
AAGGAGATTGAACAGAAAAT+GGG 0.472263 1_3:-52025157 Msa0124320:CDS
TGCCAAATTGGAAGATGAAA+AGG 0.472473 1_3:-52029137 Msa0124320:CDS
CTCTTTAACGGTATCATACT+CGG 0.473317 1_3:+52024691 None:intergenic
TTTCATCTTCCAATTTGGCA+AGG 0.473728 1_3:+52029140 None:intergenic
TTTCATTGATCCTCCTCTGC+AGG 0.474372 1_3:+52025251 None:intergenic
TTTACCAATGGTTACTTCCA+TGG 0.474662 1_3:-52029503 Msa0124320:CDS
ATTTCTCCACAAGCAGAGAC+TGG 0.475100 1_3:+52027700 None:intergenic
AGAACTCTTTGCTGAACTGC+AGG 0.476323 1_3:-52025822 Msa0124320:CDS
ATGTGTAAGGCCACCCACTA+AGG 0.476331 1_3:-52024309 Msa0124320:CDS
TCTCTGGAGATGCAGACTCT+TGG 0.476423 1_3:-52025590 Msa0124320:CDS
ACAAGATTTGATGAAGAAAG+TGG 0.476941 1_3:-52024747 Msa0124320:CDS
AGTTGAAGTTCGAGACTTGA+AGG 0.477091 1_3:-52028999 Msa0124320:CDS
TGATCATATGCTTGAGTTGT+GGG 0.477759 1_3:-52025014 Msa0124320:CDS
CAATGGAGGCCGTGGCACTA+AGG 0.478761 1_3:-52029230 Msa0124320:CDS
TTGCTCTTCAAGTTTCCCCT+TGG 0.479611 1_3:+52026048 None:intergenic
CGCCACCATAGTAGAGGGTC+GGG 0.480896 1_3:+52033815 None:intergenic
GAAAGAATTAGTTAGCAAGT+TGG 0.480981 1_3:-52025690 Msa0124320:CDS
AAGCTATGATTGACGAGGTC+AGG 0.481190 1_3:-52027959 Msa0124320:CDS
AAATTAAAATACTAAGGGTT+GGG 0.482199 1_3:-52026999 Msa0124320:CDS
CTTGTCAGATTAGGAATGAA+AGG 0.482780 1_3:-52026192 Msa0124320:CDS
TCGCAATCTCTCCTCTTGTA+AGG 0.483536 1_3:+52028343 None:intergenic
AAAATTAAAATACTAAGGGT+TGG 0.484576 1_3:-52027000 Msa0124320:CDS
TTTCTTCAAGTTCTTGGTGT+AGG 0.485996 1_3:+52025924 None:intergenic
TCCACAATGCTTTGGCTCAT+CGG 0.486153 1_3:-52027922 Msa0124320:CDS
TCATCAGAATCAGATGAGAT+TGG 0.487254 1_3:-52024566 Msa0124320:CDS
GAGGCACAAACATGTACAAA+AGG 0.487970 1_3:+52024181 None:intergenic
CAACAACACTATGACGATGA+TGG 0.489271 1_3:-52033770 Msa0124320:CDS
GGAGAATGTATTCTTGGTGG+TGG 0.490065 1_3:-52030564 Msa0124320:CDS
GCAAGTTGGAAGGTGAAAAT+GGG 0.490099 1_3:-52025676 Msa0124320:CDS
ACATCCTTCAGGAGATTCCT+TGG 0.492799 1_3:-52024906 Msa0124320:CDS
TTGAGTTCTTGGGACTTATG+TGG 0.494173 1_3:+52030536 None:intergenic
AATTCTGCTTTGAACAAGAC+AGG 0.495904 1_3:-52029364 Msa0124320:CDS
GGTTTCTCTATATTCCCAAA+GGG 0.496528 1_3:-52027331 Msa0124320:CDS
ACCGAACTTGATGTACTAAG+AGG 0.498597 1_3:-52027561 Msa0124320:CDS
TTATCTTCAATCTGTCCTCC+AGG 0.499024 1_3:+52026323 None:intergenic
TGTTCGAGTAGAAGCTGAAA+AGG 0.499162 1_3:-52028801 Msa0124320:CDS
ATCAACTCTTGCTGCTGAGA+AGG 0.501753 1_3:-52027679 Msa0124320:CDS
TTGGAAGATGAAAAGGAAGC+TGG 0.501921 1_3:-52029130 Msa0124320:CDS
CATTCAAAGCACTGATAGCT+GGG 0.502438 1_3:+52025624 None:intergenic
GTATCCAAGATTTGGAGAAA+AGG 0.502936 1_3:-52027146 Msa0124320:CDS
GAACGAATGTCTCGTGGGAC+AGG 0.503530 1_3:+52026449 None:intergenic
GTTCATCATATGGAGTAAGC+AGG 0.507177 1_3:-52025057 Msa0124320:CDS
AAAGTCTCTGGCACTCAACT+AGG 0.508091 1_3:+52027112 None:intergenic
TTTGGAACTAAAAGGAGAAA+GGG 0.508114 1_3:-52027385 Msa0124320:CDS
GTTTGAAGGGCATGCTCGAA+GGG 0.510650 1_3:-52029296 Msa0124320:CDS
ATGAGATTGGAAGTGTCAGC+AGG 0.511099 1_3:-52024553 Msa0124320:CDS
GTATATGGTTCAGGAGAGTT+CGG 0.512260 1_3:+52026908 None:intergenic
TCAAAAGCATATTCTTGTGA+AGG 0.513350 1_3:-52030685 Msa0124320:CDS
ATTTGGAACTAAAAGGAGAA+AGG 0.513777 1_3:-52027386 Msa0124320:CDS
TCAATGAAACACTGCTTCAA+GGG 0.516063 1_3:-52025790 Msa0124320:CDS
GACCGTCAAAATGAAGAGCT+TGG 0.516532 1_3:-52025992 Msa0124320:CDS
AGATGAAGATCAATCTGTTA+CGG 0.516564 1_3:-52025302 Msa0124320:CDS
GTCTTAAAGCATCTATAGAA+AGG 0.518320 1_3:+52024224 None:intergenic
GGGTTTAACATGAGATGGGA+GGG 0.519000 1_3:-52033859 None:intergenic
ACTATTGAGAAGAGTACAAA+GGG 0.519100 1_3:-52024722 Msa0124320:CDS
GAGTGAGGAGAAGGGTAACT+TGG 0.520153 1_3:-52026488 Msa0124320:CDS
CTCCAGGAACTTAAACAGCT+TGG 0.521410 1_3:-52026382 Msa0124320:CDS
ATTTCTGGTTCACTTCACTT+AGG 0.521928 1_3:+52025966 None:intergenic
CTAGGAGAATGTATTCTTGG+TGG 0.522313 1_3:-52030567 Msa0124320:CDS
TTGCATGTTCTCGAGGGATG+AGG 0.522687 1_3:+52029320 None:intergenic
GAAGATCTGAGTGAGGAGAA+GGG 0.523252 1_3:-52026496 Msa0124320:CDS
TGAAAGAAGATGCAAAGTGC+CGG 0.523437 1_3:-52027239 Msa0124320:CDS
AATAGGACAACTTCAGTTGG+AGG 0.523913 1_3:-52024492 Msa0124320:CDS
GGAAGCGGTAGTGAAATTAC+AGG 0.525734 1_3:-52028978 Msa0124320:CDS
GATCCTTCTAACATTCTCCT+CGG 0.528353 1_3:+52028709 None:intergenic
AAGATGCAGATTCCTTTGCC+AGG 0.529544 1_3:-52029702 Msa0124320:CDS
CTCTTGTTGTCTTCTTCACG+TGG 0.530973 1_3:+52024830 None:intergenic
TCAAACTTTGCATGTTCTCG+AGG 0.532172 1_3:+52029313 None:intergenic
GAGGATCAATGAAATTTCAA+TGG 0.535025 1_3:-52025242 Msa0124320:CDS
CAAACTTTGCATGTTCTCGA+GGG 0.536244 1_3:+52029314 None:intergenic
TTTCTCCAAAAGCTTCTCCA+TGG 0.536701 1_3:+52027809 None:intergenic
CAGTCTTTGGCACACAAGAT+GGG 0.537044 1_3:-52028422 Msa0124320:CDS
TTGAAGACTCTTGACATTCA+CGG 0.537474 1_3:-52026964 Msa0124320:CDS
AGAGAGTTTATGTTCCAGAC+TGG 0.538887 1_3:+52028568 None:intergenic
GAAAGAAGATGCAAAGTGCC+GGG 0.539689 1_3:-52027238 Msa0124320:CDS
AAAGAATCAGGAGTTGAAGT+TGG 0.539926 1_3:-52026671 Msa0124320:CDS
TTTCAAGGAAAGCCACCACT+TGG 0.540917 1_3:-52026845 Msa0124320:CDS
TGCTGACTTTCACAGTAAAG+TGG 0.541759 1_3:-52028243 Msa0124320:CDS
ATCTTCAAATCTTCCCATCA+AGG 0.542230 1_3:+52026513 None:intergenic
TATGGTAAAATTGGAAACCA+TGG 0.542629 1_3:-52027826 Msa0124320:CDS
TGAAGTTGAGTCCTTGAAGC+AGG 0.543245 1_3:-52028828 Msa0124320:CDS
ATTCTTCACCAGCTTGCGGT+TGG 0.543654 1_3:+52024625 None:intergenic
AATCCTTGAAAGACATGAAG+AGG 0.543702 1_3:+52030657 None:intergenic
AGTGAAATTACAGGCTGAAA+GGG 0.543796 1_3:-52028969 Msa0124320:CDS
TTTGCAAGAAGAGGCTAGGA+TGG 0.543818 1_3:-52024153 Msa0124320:three_prime_UTR
TAAACTCTCTTGTGCTGAAG+AGG 0.543918 1_3:-52028555 Msa0124320:CDS
AACAACACTATGACGATGAT+GGG 0.544118 1_3:-52033769 Msa0124320:CDS
AAGAACTTGACGAGGAGTCC+AGG 0.545697 1_3:-52026747 Msa0124320:CDS
GTCTCCATGGAAGTAACCAT+TGG 0.546135 1_3:+52029499 None:intergenic
TTATAGGGCATACCGTGCAT+TGG 0.546838 1_3:-52029623 Msa0124320:CDS
GAGAGAGATTCAAGAAGCAA+AGG 0.548343 1_3:-52025176 Msa0124320:CDS
CTACATTCTTCACCAGCTTG+CGG 0.548502 1_3:+52024621 None:intergenic
TAGTGAAATTACAGGCTGAA+AGG 0.549622 1_3:-52028970 Msa0124320:CDS
CAGAGGAAAAGTAAATGTGT+TGG 0.551361 1_3:-52027733 Msa0124320:CDS
AGTACGTGGCTCTGTCTCCA+TGG 0.551953 1_3:+52029486 None:intergenic
AGTTTGAAGGGCATGCTCGA+AGG 0.552929 1_3:-52029297 Msa0124320:CDS
AACATGCCAGTCTCTGCTTG+TGG 0.554765 1_3:-52027706 Msa0124320:CDS
ACAGAAAGCGGTGATGGCTA+CGG 0.554953 1_3:-52030611 Msa0124320:CDS
TGAAACACTGCTTCAAGGGA+AGG 0.555869 1_3:-52025786 Msa0124320:CDS
CGGTGATGGCTACGGCGACT+CGG 0.556718 1_3:-52030603 Msa0124320:CDS
TCGTCAAAGAAGAGCATCCA+AGG 0.556762 1_3:-52024942 Msa0124320:CDS
TTTCCAATTGTCCTCAGACA+AGG 0.557165 1_3:-52026014 Msa0124320:CDS
AACTTGAAGAAACTAAGCTA+AGG 0.557889 1_3:-52025913 Msa0124320:CDS
AGCTACTCTTCTTCAGTACC+AGG 0.558355 1_3:-52028945 Msa0124320:CDS
AATCAGAACTGAATTCTCAA+TGG 0.559228 1_3:+52026822 None:intergenic
TACTAAACTTAATGAAGAGA+AGG 0.559579 1_3:-52028633 Msa0124320:CDS
CATTTCCGCTCTCCTGGCAA+AGG 0.561069 1_3:+52029690 None:intergenic
GAGCTAAACAATGGAGGCCG+TGG 0.561432 1_3:-52029238 Msa0124320:CDS
TTGTCAGATTAGGAATGAAA+GGG 0.562439 1_3:-52026191 Msa0124320:CDS
CGGTTCAGAAAATAATAACC+TGG 0.562555 1_3:-52026341 Msa0124320:CDS
AATAGAACAGAAAGCGGTGA+TGG 0.562775 1_3:-52030617 Msa0124320:CDS
GGAGAGATTGCGATTCATTG+AGG 0.563227 1_3:-52028333 Msa0124320:CDS
GATTAGATATGATGATGCCA+AGG 0.563374 1_3:-52026065 Msa0124320:CDS
AAATCGTCTGTAATCATCAC+AGG 0.564387 1_3:+52029523 None:intergenic
GAGTGATCCGTCATGCTCAT+CGG 0.564535 1_3:-52029576 Msa0124320:CDS
TGGTTTCTCTATATTCCCAA+AGG 0.566371 1_3:-52027332 Msa0124320:CDS
GAATAAATGAGATTGAACAA+TGG 0.568780 1_3:-52025859 Msa0124320:CDS
ATTGCAAATAGAGTTCCAAA+AGG 0.569956 1_3:-52026701 Msa0124320:CDS
TTTCAGCTTCTACTCGAACA+AGG 0.570464 1_3:+52028804 None:intergenic
CCTCATGTATTTGCAAGAAG+AGG 0.570845 1_3:-52024162 Msa0124320:three_prime_UTR
TGAAAAGCTTGAGAAGCTCT+CGG 0.571597 1_3:-52027625 Msa0124320:CDS
TGAAGATGAAGTGGCCAACA+AGG 0.572143 1_3:-52027280 Msa0124320:CDS
TGTATTTGCAAGAAGAGGCT+AGG 0.572781 1_3:-52024157 Msa0124320:three_prime_UTR
ATTAGGAAATGCTTCAGCCA+TGG 0.574632 1_3:+52029552 None:intergenic
ACTTTGGAGTTCCTTACAAG+AGG 0.576282 1_3:-52028354 Msa0124320:CDS
GATACAGTCTAAGCAGTTCA+CGG 0.576419 1_3:-52026725 Msa0124320:CDS
GAAAACAGAATTGCAAAGAA+CGG 0.576863 1_3:-52026101 Msa0124320:CDS
CCAAAATGGCCGATCAAAGT+CGG 0.576997 1_3:-52024409 Msa0124320:CDS
ACTCTCCTGAACCATATACA+TGG 0.577550 1_3:-52026904 Msa0124320:CDS
TGAGAAAATTAAAATACTAA+GGG 0.577739 1_3:-52027004 Msa0124320:CDS
GGAAAAGTAAATGTGTTGGA+AGG 0.577807 1_3:-52027729 Msa0124320:CDS
AAGATTTGAAGATCTGAGTG+AGG 0.578270 1_3:-52026503 Msa0124320:CDS
GTCTCTGGCACTCAACTAGG+AGG 0.578682 1_3:+52027115 None:intergenic
GAATTAGTTAGCAAGTTGGA+AGG 0.579453 1_3:-52025686 Msa0124320:CDS
GTTCGATGCCAACCGCAAGC+TGG 0.581375 1_3:-52024633 Msa0124320:CDS
TCCTTCAGGAGATTCCTTGG+TGG 0.582609 1_3:-52024903 Msa0124320:CDS
CTTTGACGACGATCTACTGC+CGG 0.582777 1_3:+52024956 None:intergenic
AACATGAGATGGGAGGGAAT+CGG 0.583323 1_3:-52033853 None:intergenic
GGTCAAGAACTTGATAAGCT+CGG 0.584047 1_3:-52026361 Msa0124320:CDS
TATTCAAAAGCAAGATGATG+TGG 0.584365 1_3:-52027037 Msa0124320:CDS
ACTTCCAAGACCTGCAGAGG+AGG 0.584918 1_3:-52025261 Msa0124320:CDS
ACAGTAAAGTGGAAATACTA+GGG 0.585668 1_3:-52028232 Msa0124320:CDS
CATATCTCTCGGCCAATGCA+CGG 0.585936 1_3:+52029611 None:intergenic
ACTTGAAGAAACTAAGCTAA+GGG 0.587700 1_3:-52025912 Msa0124320:CDS
GATTACAGACGATTTACCAA+TGG 0.589018 1_3:-52029515 Msa0124320:CDS
TGTTCAATATAAACAGTGCT+CGG 0.589370 1_3:-52028768 Msa0124320:CDS
AGACGAGAACTCAAAGCTGA+AGG 0.593652 1_3:-52027886 Msa0124320:CDS
TGTGTAAGGCCACCCACTAA+GGG 0.594039 1_3:-52024308 Msa0124320:CDS
GAGAATGTATTCTTGGTGGT+GGG 0.594656 1_3:-52030563 Msa0124320:CDS
TTCATCATATGGAGTAAGCA+GGG 0.596850 1_3:-52025056 Msa0124320:CDS
GAACTGCTTAGACTGTATCC+TGG 0.596877 1_3:+52026729 None:intergenic
AGTTCGAGACTTGAAGGAAG+CGG 0.597526 1_3:-52028993 Msa0124320:CDS
GAGTCCAGAAATGTACGTGA+AGG 0.597584 1_3:+52029448 None:intergenic
AGCACTGTTTATATTGAACA+AGG 0.598291 1_3:+52028771 None:intergenic
TCTCCGATATCAGCAATGCT+TGG 0.598439 1_3:-52028600 Msa0124320:CDS
TCCACCAAGGAATCTCCTGA+AGG 0.599034 1_3:+52024902 None:intergenic
ATTAGATATGATGATGCCAA+GGG 0.599366 1_3:-52026064 Msa0124320:CDS
ACCGATGAGCCAAAGCATTG+TGG 0.599969 1_3:+52027921 None:intergenic
CTAAGTTATGAAGTACATGA+AGG 0.600656 1_3:-52025881 Msa0124320:CDS
GTCTGAACGCGTGACAAAAG+CGG 0.600691 1_3:-52029191 Msa0124320:CDS
TAGATTGAACGAATGTCTCG+TGG 0.601109 1_3:+52026443 None:intergenic
GAAGTTGAATGAAGATGAAG+TGG 0.602243 1_3:-52027289 Msa0124320:CDS
TTAAACCAGAAATTAAGGAA+AGG 0.604257 1_3:+52024079 None:intergenic
TACAACAATAGAACAGAAAG+CGG 0.606213 1_3:-52030623 Msa0124320:CDS
ACTCTCTTGTGCTGAAGAGG+AGG 0.606683 1_3:-52028552 Msa0124320:CDS
TGAAGAAGACAACAAGAGTA+GGG 0.607872 1_3:-52024825 Msa0124320:CDS
GAGAACATGCAAAGTTTGAA+GGG 0.608059 1_3:-52029309 Msa0124320:CDS
CCGTCATGCTCATCGGACCA+TGG 0.608652 1_3:-52029569 Msa0124320:CDS
AGTTGCATGATCATATCTCT+CGG 0.608938 1_3:+52029600 None:intergenic
CCGAACTTGATGTACTAAGA+GGG 0.609912 1_3:-52027560 Msa0124320:CDS
CCTTGGTGGAAAAGGAGTTG+GGG 0.610602 1_3:-52024889 Msa0124320:CDS
AGAAATCAATCACCCTTAGT+GGG 0.613247 1_3:+52024296 None:intergenic
TTTCTGGTTTAATGCATGTG+TGG 0.615030 1_3:-52024068 Msa0124320:three_prime_UTR
AGACATGAGCCTTAGTGCCA+CGG 0.616789 1_3:+52029221 None:intergenic
GTGAAGAAGACAACAAGAGT+AGG 0.617580 1_3:-52024826 Msa0124320:CDS
AATTCTCAATGGCCAAGTGG+TGG 0.618262 1_3:+52026833 None:intergenic
ACATGTATCAGCTAGCTCAA+AGG 0.618865 1_3:+52025763 None:intergenic
GGAGAGATTAAAAGAATCCG+AGG 0.620033 1_3:-52028726 Msa0124320:CDS
TCGACTTCCAAGACCTGCAG+AGG 0.620118 1_3:-52025264 Msa0124320:CDS
GCTGGTGAAGAATGTAGAAG+AGG 0.621692 1_3:-52024615 Msa0124320:CDS
AGGGTGCACTGTCTTCAGCT+GGG 0.621875 1_3:-52024595 Msa0124320:CDS
TCATATGGAGTAAGCAGGGG+AGG 0.622148 1_3:-52025052 Msa0124320:CDS
GCTGAGTTGGATAGTGTCAG+AGG 0.622351 1_3:-52027750 Msa0124320:CDS
TGGGTTTAACATGAGATGGG+AGG 0.622716 1_3:-52033860 None:intergenic
GACAGTAGTGAGCTAAACAA+TGG 0.623240 1_3:-52029247 Msa0124320:CDS
GCGCCACCATAGTAGAGGGT+CGG 0.624854 1_3:+52033814 None:intergenic
CATAAACTACTCGAAAGACA+TGG 0.625322 1_3:-52025726 Msa0124320:CDS
CTGGTGAAGAATGTAGAAGA+GGG 0.626232 1_3:-52024614 Msa0124320:CDS
AACTATTGAGAAGAGTACAA+AGG 0.627089 1_3:-52024723 Msa0124320:CDS
TCATCGCGCCACCATAGTAG+AGG 0.627091 1_3:+52033809 None:intergenic
TCTGCAGGTCTTGGAAGTCG+AGG 0.629376 1_3:+52025266 None:intergenic
AAAGTCGGAGAGTACGTTTG+CGG 0.631783 1_3:-52024394 Msa0124320:CDS
AGATTGGAAGTGTCAGCAGG+AGG 0.632038 1_3:-52024550 Msa0124320:CDS
GTGCTGAAGAGGAGGTGCGT+AGG 0.632311 1_3:-52028544 Msa0124320:CDS
ATCTTTCAGAATTTGCTGAG+TGG 0.633785 1_3:+52027443 None:intergenic
AATAGAGAAACTTGAACAGG+AGG 0.633802 1_3:-52028069 Msa0124320:CDS
ATGCACAGATATGGACGTCA+AGG 0.634287 1_3:-52029752 Msa0124320:intron
AGTCCAGAAATGTACGTGAA+GGG 0.635028 1_3:+52029449 None:intergenic
CTTGGTGGAAAAGGAGTTGG+GGG 0.636806 1_3:-52024888 Msa0124320:CDS
ATGATCATATGCTTGAGTTG+TGG 0.638104 1_3:-52025015 Msa0124320:CDS
CCTCTTCTTGCAAATACATG+AGG 0.639106 1_3:+52024162 None:intergenic
GTGTAAAGCATGAAACGTCT+TGG 0.641708 1_3:+52026129 None:intergenic
ATCCCGACCCTCTACTATGG+TGG 0.641928 1_3:-52033817 Msa0124320:CDS
TGGCGTGTTTCTGGAGTACG+TGG 0.644024 1_3:+52029472 None:intergenic
TTGAAGTTGGCAATAAGCAA+AGG 0.644687 1_3:-52026658 Msa0124320:CDS
AGATTCCTTTGCCAGGAGAG+CGG 0.644786 1_3:-52029695 Msa0124320:CDS
CTGAATTCTCAATGGCCAAG+TGG 0.645914 1_3:+52026830 None:intergenic
GATTGAACAATGGGAAACCC+AGG 0.647429 1_3:-52025849 Msa0124320:CDS
GGCTTGTAATTGGGAAAACA+AGG 0.647839 1_3:+52027653 None:intergenic
CCAGAAATGTACGTGAAGGG+TGG 0.648595 1_3:+52029452 None:intergenic
TCTCTGGCACTCAACTAGGA+GGG 0.649901 1_3:+52027116 None:intergenic
TTGAAGGGCATGCTCGAAGG+GGG 0.652093 1_3:-52029294 Msa0124320:CDS
CCATGGTCCGATGAGCATGA+CGG 0.652603 1_3:+52029569 None:intergenic
TGATAAGACACAGAAGATTG+CGG 0.653033 1_3:-52024984 Msa0124320:CDS
CATCGCGCCACCATAGTAGA+GGG 0.653203 1_3:+52033810 None:intergenic
AGGTCTTGGAAGTCGAGGAG+AGG 0.656348 1_3:+52025271 None:intergenic
AGATTGAACGAATGTCTCGT+GGG 0.658399 1_3:+52026444 None:intergenic
GCACTGTTTATATTGAACAA+GGG 0.661257 1_3:+52028772 None:intergenic
AGGAGATTGAACAGAAAATG+GGG 0.663420 1_3:-52025156 Msa0124320:CDS
ATCACGTAAACAGTCTCTAG+AGG 0.664145 1_3:-52028201 Msa0124320:CDS
ATGGTGGCGCGATGACGAGT+CGG 0.666278 1_3:-52033801 Msa0124320:CDS
AATCAATCACCCTTAGTGGG+TGG 0.666883 1_3:+52024299 None:intergenic
TTTGAAGGGCATGCTCGAAG+GGG 0.668153 1_3:-52029295 Msa0124320:CDS
AAATTCTAAGATAGACGATG+AGG 0.670513 1_3:-52028519 Msa0124320:CDS
AACAGAATTGCAAAGAACGG+CGG 0.672848 1_3:-52026098 Msa0124320:CDS
AGATCTCAAGAAGAATGTCA+CGG 0.675887 1_3:-52024853 Msa0124320:CDS
GGAGACATTATCAAAACTGG+AGG 0.678725 1_3:-52028747 Msa0124320:CDS
TTCAGAAAATAATAACCTGG+AGG 0.680325 1_3:-52026338 Msa0124320:CDS
TGAACGCGTGACAAAAGCGG+AGG 0.680546 1_3:-52029188 Msa0124320:CDS
AAAGCTGAAGGAGACATGTG+AGG 0.682253 1_3:-52027874 Msa0124320:CDS
AGTAGTGAGCTAAACAATGG+AGG 0.683313 1_3:-52029244 Msa0124320:CDS
GTTTCGGAACAAGCGCAGAG+AGG 0.691187 1_3:-52024524 Msa0124320:CDS
TGAAGTGCACAGATTCAATG+AGG 0.691968 1_3:-52028177 Msa0124320:CDS
TCATCATATGGAGTAAGCAG+GGG 0.695084 1_3:-52025055 Msa0124320:CDS
TGTGTGGATATACTTACAGT+GGG 0.695323 1_3:-52024052 Msa0124320:three_prime_UTR
ATTCTCCTAGAATCTGCATG+AGG 0.703605 1_3:+52030580 None:intergenic
TTGTAATTGGGAAAACAAGG+TGG 0.707343 1_3:+52027656 None:intergenic
ACATGAAGCTATGATTGACG+AGG 0.712320 1_3:-52027964 Msa0124320:CDS
GTGCCGGGAACAAGAATACG+AGG 0.714394 1_3:-52027223 Msa0124320:CDS
ATGTGTGGATATACTTACAG+TGG 0.727011 1_3:-52024053 Msa0124320:three_prime_UTR
TTAGATATGATGATGCCAAG+GGG 0.730033 1_3:-52026063 Msa0124320:CDS
CCGGGAACAAGAATACGAGG+AGG 0.762245 1_3:-52027220 Msa0124320:CDS
TGGGTTGTTAACAATGACAG+TGG 0.776737 1_3:-52033750 Msa0124320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTGTTGA+AGG - chr1_3:52025088-52025107 Msa0124320:CDS 10.0%
!! AAAAAATTATTTGTATTAGT+TGG + chr1_3:52026094-52026113 None:intergenic 10.0%
!!! ATTGATAATATAATTAAAGA+AGG - chr1_3:52026206-52026225 Msa0124320:CDS 10.0%
!!! TTTATTTTTTGTTTTTACTT+TGG + chr1_3:52026352-52026371 None:intergenic 10.0%
!!! TTATTTTTTTACTTTCATTT+TGG - chr1_3:52026522-52026541 Msa0124320:CDS 10.0%
!! AATAAAGTTAAATTCATTTG+AGG - chr1_3:52024492-52024511 Msa0124320:CDS 15.0%
!!! ATTTTTAACTTTGTTTTACA+TGG - chr1_3:52024817-52024836 Msa0124320:CDS 15.0%
!!! TCTATTCTTTAATTTTTTGA+AGG - chr1_3:52024979-52024998 Msa0124320:CDS 15.0%
!! ATAATTGTATATGTTTCATA+TGG + chr1_3:52025903-52025922 None:intergenic 15.0%
!! TTGGTATTAAAGATTATTAA+AGG + chr1_3:52026166-52026185 None:intergenic 15.0%
!!! AAATAATCAAAATTTTATGG+CGG + chr1_3:52026508-52026527 None:intergenic 15.0%
!!! TCATTTTCTATTGTATTTAT+TGG - chr1_3:52026908-52026927 Msa0124320:CDS 15.0%
!!! ATTTTTTTAGAGTATTGAAA+TGG - chr1_3:52027666-52027685 Msa0124320:CDS 15.0%
!! TACTATAAAAATCCATATAA+CGG + chr1_3:52027818-52027837 None:intergenic 15.0%
!!! TGACAAAATTATTTCTAAAT+TGG - chr1_3:52030806-52030825 Msa0124320:intron 15.0%
!! TGAGAAAATTAAAATACTAA+GGG - chr1_3:52030872-52030891 Msa0124320:intron 15.0%
!! GAAATTAAATAAATACTGGT+AGG + chr1_3:52024736-52024755 None:intergenic 20.0%
!! TTGGGAAATTAAATAAATAC+TGG + chr1_3:52024740-52024759 None:intergenic 20.0%
!! TTTACATGGATAAAATTCTA+CGG - chr1_3:52024831-52024850 Msa0124320:CDS 20.0%
!!! AAAAAAAGTGTCTCTTTTAA+TGG - chr1_3:52025040-52025059 Msa0124320:CDS 20.0%
!!! CTAAGGTTTTTTGATAAATA+AGG - chr1_3:52025239-52025258 Msa0124320:CDS 20.0%
!! GTTCTTACGTAATATAATAA+TGG - chr1_3:52025309-52025328 Msa0124320:CDS 20.0%
!!! AATTTTGACTCAATAAATGA+CGG - chr1_3:52025371-52025390 Msa0124320:intron 20.0%
!! ATAAAGAAACCATATCTTTA+CGG + chr1_3:52025507-52025526 None:intergenic 20.0%
!! TACTCTATTTAACTAAAGTA+CGG + chr1_3:52025558-52025577 None:intergenic 20.0%
!! TGACTAAAAATATTTACACT+TGG - chr1_3:52025781-52025800 Msa0124320:CDS 20.0%
!!! TTAACAAAAGTTGATGTTTT+TGG - chr1_3:52025857-52025876 Msa0124320:CDS 20.0%
!!! GATGTTTTTGGTTAAAAAAT+TGG - chr1_3:52025869-52025888 Msa0124320:CDS 20.0%
!! TAATTAGTACTATTTGTCAT+TGG + chr1_3:52026185-52026204 None:intergenic 20.0%
!!! ATGTAGTTTTTTCAGTTATA+TGG - chr1_3:52026707-52026726 Msa0124320:CDS 20.0%
!! TTGATTTACAATAAGTATGA+TGG - chr1_3:52026841-52026860 Msa0124320:CDS 20.0%
!! TGATTTACAATAAGTATGAT+GGG - chr1_3:52026842-52026861 Msa0124320:CDS 20.0%
!! CATTAATTTATCCTATACTA+CGG + chr1_3:52027523-52027542 None:intergenic 20.0%
!!! GTTTTTACATTAAACTTCAA+AGG - chr1_3:52027542-52027561 Msa0124320:CDS 20.0%
!!! CATTTTTTTTAAACTACAAG+TGG - chr1_3:52027839-52027858 Msa0124320:CDS 20.0%
!! GTTTGTATTATATGAGTTAT+TGG - chr1_3:52028021-52028040 Msa0124320:CDS 20.0%
!!! GTTCATTTTATCAAAAGAAA+TGG - chr1_3:52028470-52028489 Msa0124320:CDS 20.0%
!!! AATAATTTTGTCAGACATTT+TGG + chr1_3:52030799-52030818 None:intergenic 20.0%
!! CTGAGAAAATTAAAATACTA+AGG - chr1_3:52030871-52030890 Msa0124320:intron 20.0%
!! AAAATTAAAATACTAAGGGT+TGG - chr1_3:52030876-52030895 Msa0124320:CDS 20.0%
!! AAATTAAAATACTAAGGGTT+GGG - chr1_3:52030877-52030896 Msa0124320:CDS 20.0%
!! AATAAATGAGATTGAACAAT+GGG - chr1_3:52032018-52032037 Msa0124320:intron 20.0%
!! TAAAGAAAGGAAATAATAGT+TGG + chr1_3:52032463-52032482 None:intergenic 20.0%
!! CAAATTATATGCATAAAGAA+AGG + chr1_3:52032476-52032495 None:intergenic 20.0%
!! AAAAAGATGAGAAAAAGAAA+CGG + chr1_3:52033756-52033775 None:intergenic 20.0%
! GAAAGATTCTTAAGTTCATA+AGG + chr1_3:52024171-52024190 None:intergenic 25.0%
! ATTTATAAAAACACAACACG+AGG + chr1_3:52024315-52024334 None:intergenic 25.0%
!!! TCGTGTTGTGTTTTTATAAA+TGG - chr1_3:52024314-52024333 Msa0124320:CDS 25.0%
! AAATAAATACTGGTAGGAAT+TGG + chr1_3:52024730-52024749 None:intergenic 25.0%
! TTACATGGATAAAATTCTAC+GGG - chr1_3:52024832-52024851 Msa0124320:CDS 25.0%
! ACTATAAGCGAAAAGAAATT+TGG + chr1_3:52024865-52024884 None:intergenic 25.0%
!! TTTCTTTTCGCTTATAGTAA+TGG - chr1_3:52024867-52024886 Msa0124320:CDS 25.0%
!!! TTAATTTTTTGAAGGAACAG+TGG - chr1_3:52024987-52025006 Msa0124320:CDS 25.0%
!! TTTAGAGAAAAGTTAGTCTA+AGG - chr1_3:52025280-52025299 Msa0124320:CDS 25.0%
! AAAAAATGTCCGTAAAGATA+TGG - chr1_3:52025495-52025514 Msa0124320:intron 25.0%
!! TGAGATTAAGTGTTGTATTT+GGG + chr1_3:52025668-52025687 None:intergenic 25.0%
!! ATGAGATTAAGTGTTGTATT+TGG + chr1_3:52025669-52025688 None:intergenic 25.0%
! ATACAACACTTAATCTCATA+TGG - chr1_3:52025670-52025689 Msa0124320:CDS 25.0%
! ACAATACTTCAAATATACTC+CGG - chr1_3:52025810-52025829 Msa0124320:CDS 25.0%
! TCTATCTATAAGGCAAATTT+AGG - chr1_3:52025834-52025853 Msa0124320:CDS 25.0%
! GTATATGTTTCATATGAATC+TGG + chr1_3:52026004-52026023 None:intergenic 25.0%
! TTATTTGTATTAGTTGGACT+TGG + chr1_3:52026088-52026107 None:intergenic 25.0%
!!! TTTACTTTGGCTTTTGATTT+TGG + chr1_3:52026339-52026358 None:intergenic 25.0%
! ATGACACTAAATTTCATCAT+AGG - chr1_3:52026459-52026478 Msa0124320:CDS 25.0%
! AACTTAAGATCAAAGTTAAG+TGG + chr1_3:52026605-52026624 None:intergenic 25.0%
!! GAATTTTGTTCATTCAGTTT+TGG - chr1_3:52026966-52026985 Msa0124320:CDS 25.0%
! AAAAAGAAAACATACCTGAT+TGG + chr1_3:52027019-52027038 None:intergenic 25.0%
! ATGTATATTTCATCAATGTC+TGG - chr1_3:52027696-52027715 Msa0124320:CDS 25.0%
!! GATTTTATTAAGCCGTTATA+TGG - chr1_3:52027803-52027822 Msa0124320:CDS 25.0%
! AAATATGGTCATATCTTTCT+CGG + chr1_3:52028055-52028074 None:intergenic 25.0%
!!! AAATGGTTGAAGAGTTTTAT+AGG - chr1_3:52028237-52028256 Msa0124320:CDS 25.0%
!!! AATGGTTGAAGAGTTTTATA+GGG - chr1_3:52028238-52028257 Msa0124320:CDS 25.0%
!! AGAAATATTTTTCTCCAGAT+TGG + chr1_3:52028975-52028994 None:intergenic 25.0%
!! AAATATTTCTTTTGCTCAGA+AGG - chr1_3:52028985-52029004 Msa0124320:CDS 25.0%
! TACTAAACTTAATGAAGAGA+AGG - chr1_3:52029243-52029262 Msa0124320:CDS 25.0%
! AGAAATTTACTGTCTTAAAG+AGG - chr1_3:52029867-52029886 Msa0124320:intron 25.0%
!! CAAATAGTGAATTTTCCAAA+AGG + chr1_3:52030287-52030306 None:intergenic 25.0%
! ATCAATTTGTAATTCCTTGT+TGG + chr1_3:52030613-52030632 None:intergenic 25.0%
!!! GTTTTTCAGAGATAATATTC+TGG + chr1_3:52031475-52031494 None:intergenic 25.0%
! CAAATTAGAAAGTGAAGAAA+TGG - chr1_3:52031583-52031602 Msa0124320:intron 25.0%
! GAATAAATGAGATTGAACAA+TGG - chr1_3:52032017-52032036 Msa0124320:intron 25.0%
! TGACATATTGTTTCAGTATT+TGG - chr1_3:52032347-52032366 Msa0124320:intron 25.0%
!! TTTTCTTTTAATGTAATGCC+AGG - chr1_3:52032378-52032397 Msa0124320:intron 25.0%
! AAAATCATCAATAAATGACC+TGG + chr1_3:52032399-52032418 None:intergenic 25.0%
! AATCACCAATACAATGAAAA+TGG - chr1_3:52032542-52032561 Msa0124320:intron 25.0%
! ATATCTGAATGTTCATCATA+TGG - chr1_3:52032809-52032828 Msa0124320:intron 25.0%
! AATCTTGTATGGTTATTTGA+AGG + chr1_3:52033117-52033136 None:intergenic 25.0%
! TTTCTTCATCAAATCTTGTA+TGG + chr1_3:52033128-52033147 None:intergenic 25.0%
! ATAATCCTTTCCTTAATTTC+TGG - chr1_3:52033792-52033811 Msa0124320:CDS 25.0%
! TTAAACCAGAAATTAAGGAA+AGG + chr1_3:52033800-52033819 None:intergenic 25.0%
! ATGCATTAAACCAGAAATTA+AGG + chr1_3:52033805-52033824 None:intergenic 25.0%
ATGAACTTAAGAATCTTTCC+AGG - chr1_3:52024172-52024191 Msa0124320:three_prime_UTR 30.0%
AATTTCTTACCCAAATAGAG+AGG - chr1_3:52024350-52024369 Msa0124320:CDS 30.0%
!! CATAATGGACTAAAATTCGA+CGG + chr1_3:52024459-52024478 None:intergenic 30.0%
!! GAATTTTAGTCCATTATGGA+GGG - chr1_3:52024461-52024480 Msa0124320:CDS 30.0%
!!! GATCTATTTTTATGTGTGAC+TGG + chr1_3:52024597-52024616 None:intergenic 30.0%
CACACATAAAAATAGATCAC+CGG - chr1_3:52024599-52024618 Msa0124320:CDS 30.0%
GTACTATTATTAGTCACAGT+TGG + chr1_3:52024652-52024671 None:intergenic 30.0%
!! ATATTTTTAAGGGTCATGCT+AGG + chr1_3:52024769-52024788 None:intergenic 30.0%
TACATGGATAAAATTCTACG+GGG - chr1_3:52024833-52024852 Msa0124320:CDS 30.0%
! CTGACATGTAAATTAGTCTA+AGG - chr1_3:52025222-52025241 Msa0124320:CDS 30.0%
!! GTTGTATTTGGGTGTTTTTA+AGG + chr1_3:52025657-52025676 None:intergenic 30.0%
AACACTTAATCTCATATGGA+TGG - chr1_3:52025674-52025693 Msa0124320:CDS 30.0%
ATTTGCCTTATAGATAGAAC+CGG + chr1_3:52025832-52025851 None:intergenic 30.0%
!!! CTTTTTTAGGTGAATGTATC+AGG + chr1_3:52026059-52026078 None:intergenic 30.0%
AGGTTACAAGTCAAATTCAA+AGG + chr1_3:52026146-52026165 None:intergenic 30.0%
ATTGTATTTATTGGACGATC+AGG - chr1_3:52026917-52026936 Msa0124320:CDS 30.0%
TGAACAAAATTCTGATATGC+TGG + chr1_3:52026958-52026977 None:intergenic 30.0%
TCTCAAATTGATTGATCTGA+AGG + chr1_3:52027048-52027067 None:intergenic 30.0%
TTCTGTGTGTATTCATTGAT+TGG + chr1_3:52027138-52027157 None:intergenic 30.0%
! TCAAAAGCATATTCTTGTGA+AGG - chr1_3:52027191-52027210 Msa0124320:CDS 30.0%
TACAACAATAGAACAGAAAG+CGG - chr1_3:52027253-52027272 Msa0124320:CDS 30.0%
! ATTCTAGGAGAATGTATTCT+TGG - chr1_3:52027306-52027325 Msa0124320:CDS 30.0%
! CATTACCTGTAAGATTTTCT+TGG + chr1_3:52027373-52027392 None:intergenic 30.0%
! TGTTTTCTTATCCGTAGTAT+AGG - chr1_3:52027509-52027528 Msa0124320:CDS 30.0%
ATGCCTTAAATGTTATTCTG+TGG - chr1_3:52027625-52027644 Msa0124320:CDS 30.0%
CTTCCACAGAATAACATTTA+AGG + chr1_3:52027631-52027650 None:intergenic 30.0%
AATCTGTTTCAGTTTCACTT+TGG - chr1_3:52027745-52027764 Msa0124320:CDS 30.0%
GCAACATCTATGGTTATAAA+AGG + chr1_3:52027924-52027943 None:intergenic 30.0%
TATCATTGAGATAAGTTCAG+AGG + chr1_3:52028097-52028116 None:intergenic 30.0%
ATCATCACAGGAATTTGATT+AGG + chr1_3:52028344-52028363 None:intergenic 30.0%
! TTCCTTTTCATCTTCCAATT+TGG + chr1_3:52028744-52028763 None:intergenic 30.0%
GCACTGTTTATATTGAACAA+GGG + chr1_3:52029107-52029126 None:intergenic 30.0%
AGCACTGTTTATATTGAACA+AGG + chr1_3:52029108-52029127 None:intergenic 30.0%
TGTTCAATATAAACAGTGCT+CGG - chr1_3:52029108-52029127 Msa0124320:CDS 30.0%
!! AAATTCTAAGATAGACGATG+AGG - chr1_3:52029357-52029376 Msa0124320:CDS 30.0%
AGAAAGAATTGGGTAAACTT+TGG - chr1_3:52029506-52029525 Msa0124320:CDS 30.0%
ACAGTAAAGTGGAAATACTA+GGG - chr1_3:52029644-52029663 Msa0124320:CDS 30.0%
TTTGTCTATACAAACTTTGC+AGG - chr1_3:52029759-52029778 Msa0124320:intron 30.0%
TATGGTAAAATTGGAAACCA+TGG - chr1_3:52030050-52030069 Msa0124320:intron 30.0%
! AAAAGATACTGGACTTTTCA+TGG + chr1_3:52030380-52030399 None:intergenic 30.0%
! TTCTTTCTCTGAAAAGATAC+TGG + chr1_3:52030391-52030410 None:intergenic 30.0%
TGAATTGGAACTAATGCATT+TGG - chr1_3:52030473-52030492 Msa0124320:intron 30.0%
! CTAATGCATTTGGAACTAAA+AGG - chr1_3:52030483-52030502 Msa0124320:intron 30.0%
! ATTTGGAACTAAAAGGAGAA+AGG - chr1_3:52030490-52030509 Msa0124320:intron 30.0%
! TTTGGAACTAAAAGGAGAAA+GGG - chr1_3:52030491-52030510 Msa0124320:intron 30.0%
TATTCAAAAGCAAGATGATG+TGG - chr1_3:52030839-52030858 Msa0124320:intron 30.0%
! CCTTAAGTTTTCCATGTATA+TGG + chr1_3:52030986-52031005 None:intergenic 30.0%
CCATATACATGGAAAACTTA+AGG - chr1_3:52030983-52031002 Msa0124320:intron 30.0%
AATCAGAACTGAATTCTCAA+TGG + chr1_3:52031057-52031076 None:intergenic 30.0%
ATTGCAAATAGAGTTCCAAA+AGG - chr1_3:52031175-52031194 Msa0124320:intron 30.0%
! AATAGAGTTCCAAAAGGTAT+TGG - chr1_3:52031181-52031200 Msa0124320:intron 30.0%
! GATTCTTTTCCAATACCTTT+TGG + chr1_3:52031193-52031212 None:intergenic 30.0%
!! AAAGGTATTGGAAAAGAATC+AGG - chr1_3:52031193-52031212 Msa0124320:intron 30.0%
!!! TTTTTTCCTGTAAGTTGTTG+TGG + chr1_3:52031316-52031335 None:intergenic 30.0%
! TATTATCTCTGAAAAACTCC+AGG - chr1_3:52031478-52031497 Msa0124320:intron 30.0%
TTCAGAAAATAATAACCTGG+AGG - chr1_3:52031538-52031557 Msa0124320:intron 30.0%
!! ATCAATTGACTTGTCAGATT+AGG - chr1_3:52031675-52031694 Msa0124320:intron 30.0%
TTGTCAGATTAGGAATGAAA+GGG - chr1_3:52031685-52031704 Msa0124320:intron 30.0%
!! TCAAAAGGAAAAAGTGCTTT+CGG - chr1_3:52031718-52031737 Msa0124320:intron 30.0%
! TCTTTGCAATTCTGTTTTCT+CGG + chr1_3:52031774-52031793 None:intergenic 30.0%
GAAAACAGAATTGCAAAGAA+CGG - chr1_3:52031775-52031794 Msa0124320:intron 30.0%
! ATTAGATATGATGATGCCAA+GGG - chr1_3:52031812-52031831 Msa0124320:intron 30.0%
AACTTGAAGAAACTAAGCTA+AGG - chr1_3:52031963-52031982 Msa0124320:intron 30.0%
ACTTGAAGAAACTAAGCTAA+GGG - chr1_3:52031964-52031983 Msa0124320:intron 30.0%
CTAAGTTATGAAGTACATGA+AGG - chr1_3:52031995-52032014 Msa0124320:intron 30.0%
GAAAGAATTAGTTAGCAAGT+TGG - chr1_3:52032186-52032205 Msa0124320:intron 30.0%
AAACAATATGTCAATACCTC+TGG + chr1_3:52032340-52032359 None:intergenic 30.0%
!! ATTGATGATTTTGTGACGAA+AGG - chr1_3:52032407-52032426 Msa0124320:intron 30.0%
!! TTGATGATTTTGTGACGAAA+GGG - chr1_3:52032408-52032427 Msa0124320:intron 30.0%
TAGTTGGTTACAAGTAGAAA+AGG + chr1_3:52032447-52032466 None:intergenic 30.0%
! CCAAATTTTTAACCTGGAAA+TGG + chr1_3:52032520-52032539 None:intergenic 30.0%
CCATTTCCAGGTTAAAAATT+TGG - chr1_3:52032517-52032536 Msa0124320:intron 30.0%
! GATTCACCAAATTTTTAACC+TGG + chr1_3:52032526-52032545 None:intergenic 30.0%
! GTTGACCATTTTCATTGTAT+TGG + chr1_3:52032550-52032569 None:intergenic 30.0%
AGATGAAGATCAATCTGTTA+CGG - chr1_3:52032574-52032593 Msa0124320:intron 30.0%
GAGGATCAATGAAATTTCAA+TGG - chr1_3:52032634-52032653 Msa0124320:intron 30.0%
AATCTCTCTCATTTCAACAT+TGG + chr1_3:52032690-52032709 None:intergenic 30.0%
AAAGGAGATTGAACAGAAAA+TGG - chr1_3:52032718-52032737 Msa0124320:intron 30.0%
AAGGAGATTGAACAGAAAAT+GGG - chr1_3:52032719-52032738 Msa0124320:intron 30.0%
!! ATGTTTGTTGTATGTTTCCT+TGG + chr1_3:52032954-52032973 None:intergenic 30.0%
ACAAGATTTGATGAAGAAAG+TGG - chr1_3:52033129-52033148 Msa0124320:intron 30.0%
! AACTATTGAGAAGAGTACAA+AGG - chr1_3:52033153-52033172 Msa0124320:intron 30.0%
! ACTATTGAGAAGAGTACAAA+GGG - chr1_3:52033154-52033173 Msa0124320:intron 30.0%
AAAAATAGGACAACTTCAGT+TGG - chr1_3:52033381-52033400 Msa0124320:intron 30.0%
AAGCAAAGAGAAAACCAAAA+TGG - chr1_3:52033453-52033472 Msa0124320:intron 30.0%
!! TTTCTTCTTCTTTTGGTTGT+TGG + chr1_3:52033533-52033552 None:intergenic 30.0%
!! AAGGTGTTTTCTTCTTCTTT+TGG + chr1_3:52033540-52033559 None:intergenic 30.0%
ACAAAAAAGCTAATGTCTCA+TGG + chr1_3:52033621-52033640 None:intergenic 30.0%
! GTCTTAAAGCATCTATAGAA+AGG + chr1_3:52033655-52033674 None:intergenic 30.0%
AACAACACTATGACGATGAT+GGG - chr1_3:52024107-52024126 Msa0124320:three_prime_UTR 35.0%
AGTCAAAATGAGAGAGAAAG+AGG - chr1_3:52024209-52024228 Msa0124320:three_prime_UTR 35.0%
CGAGGAAAATCAAACATCAA+CGG + chr1_3:52024297-52024316 None:intergenic 35.0%
!! CGTCGAATTTTAGTCCATTA+TGG - chr1_3:52024457-52024476 Msa0124320:CDS 35.0%
!! CGAATTTTAGTCCATTATGG+AGG - chr1_3:52024460-52024479 Msa0124320:CDS 35.0%
AACACCATCCCTAATAATCA+CGG - chr1_3:52024906-52024925 Msa0124320:CDS 35.0%
TGCTTGATCCGTGATTATTA+GGG + chr1_3:52024917-52024936 None:intergenic 35.0%
!! GTATTTGGGTGTTTTTAAGG+AGG + chr1_3:52025654-52025673 None:intergenic 35.0%
TACGCTAGATACATAAGACA+TGG + chr1_3:52025718-52025737 None:intergenic 35.0%
ATACTCCGGTTCTATCTATA+AGG - chr1_3:52025824-52025843 Msa0124320:CDS 35.0%
!!! GACTTGGACTCTTCTTTTTT+AGG + chr1_3:52026072-52026091 None:intergenic 35.0%
!!! GCTTTTGATTTTGGTTAGCT+GGG + chr1_3:52026330-52026349 None:intergenic 35.0%
AAATCCAAGTTCAACCAATC+AGG - chr1_3:52027002-52027021 Msa0124320:CDS 35.0%
AATCCTTGAAAGACATGAAG+AGG + chr1_3:52027222-52027241 None:intergenic 35.0%
TAAGTCCCAAGAACTCAAAA+TGG - chr1_3:52027345-52027364 Msa0124320:CDS 35.0%
! TTCTTGACTTGACACATTCA+TGG - chr1_3:52027455-52027474 Msa0124320:CDS 35.0%
ATATTTCATCAATGTCTGGC+TGG - chr1_3:52027700-52027719 Msa0124320:CDS 35.0%
!! TTCACTTTGGAATGTTCTTC+TGG - chr1_3:52027758-52027777 Msa0124320:CDS 35.0%
! TGGAATGTTCTTCTGGTTAT+AGG - chr1_3:52027765-52027784 Msa0124320:CDS 35.0%
GTGTGGTGACATGATTTATT+TGG - chr1_3:52027947-52027966 Msa0124320:CDS 35.0%
! AAATTTCAGCTGTTTCCTTC+AGG - chr1_3:52027977-52027996 Msa0124320:CDS 35.0%
! AATTTCAGCTGTTTCCTTCA+GGG - chr1_3:52027978-52027997 Msa0124320:CDS 35.0%
ATTGAGATAAGTTCAGAGGA+TGG + chr1_3:52028093-52028112 None:intergenic 35.0%
! CAACCATTTTCATAAGCTCT+GGG + chr1_3:52028226-52028245 None:intergenic 35.0%
! TCAACCATTTTCATAAGCTC+TGG + chr1_3:52028227-52028246 None:intergenic 35.0%
AGTTGCATGATCATATCTCT+CGG + chr1_3:52028279-52028298 None:intergenic 35.0%
AAATCGTCTGTAATCATCAC+AGG + chr1_3:52028356-52028375 None:intergenic 35.0%
GATTACAGACGATTTACCAA+TGG - chr1_3:52028361-52028380 Msa0124320:CDS 35.0%
TTTACCAATGGTTACTTCCA+TGG - chr1_3:52028373-52028392 Msa0124320:CDS 35.0%
! GTCTTGTTCAAAGCAGAATT+AGG + chr1_3:52028512-52028531 None:intergenic 35.0%
! AATTCTGCTTTGAACAAGAC+AGG - chr1_3:52028512-52028531 Msa0124320:CDS 35.0%
GAGAACATGCAAAGTTTGAA+GGG - chr1_3:52028567-52028586 Msa0124320:CDS 35.0%
TTCATCTTCCAATTTGGCAA+GGG + chr1_3:52028738-52028757 None:intergenic 35.0%
TTTCATCTTCCAATTTGGCA+AGG + chr1_3:52028739-52028758 None:intergenic 35.0%
TGCCAAATTGGAAGATGAAA+AGG - chr1_3:52028739-52028758 Msa0124320:CDS 35.0%
TAGTGAAATTACAGGCTGAA+AGG - chr1_3:52028906-52028925 Msa0124320:CDS 35.0%
AGTGAAATTACAGGCTGAAA+GGG - chr1_3:52028907-52028926 Msa0124320:CDS 35.0%
! TTATTTTCTCCAAGCATTCC+TGG + chr1_3:52028952-52028971 None:intergenic 35.0%
CTTGGAGAAAATAACCAATC+TGG - chr1_3:52028958-52028977 Msa0124320:CDS 35.0%
!!! TGAACAGAAGTGTCTTCTTT+TGG - chr1_3:52029399-52029418 Msa0124320:CDS 35.0%
ACAGTCTGAATTACAGTCTT+TGG - chr1_3:52029441-52029460 Msa0124320:CDS 35.0%
TAACGAGAAGCAGAAAGAAT+TGG - chr1_3:52029495-52029514 Msa0124320:CDS 35.0%
AACGAGAAGCAGAAAGAATT+GGG - chr1_3:52029496-52029515 Msa0124320:CDS 35.0%
AATGCAAATGCTGAAGAGTT+TGG + chr1_3:52029582-52029601 None:intergenic 35.0%
CACAGTAAAGTGGAAATACT+AGG - chr1_3:52029643-52029662 Msa0124320:CDS 35.0%
GACAATAGAGAAACTTGAAC+AGG - chr1_3:52029804-52029823 Msa0124320:intron 35.0%
AATAGAGAAACTTGAACAGG+AGG - chr1_3:52029807-52029826 Msa0124320:intron 35.0%
GATTTAGATCCACAATGCTT+TGG - chr1_3:52029946-52029965 Msa0124320:intron 35.0%
! ACTGGCTCTTATGGTAAAAT+TGG - chr1_3:52030041-52030060 Msa0124320:intron 35.0%
CAGAGGAAAAGTAAATGTGT+TGG - chr1_3:52030143-52030162 Msa0124320:intron 35.0%
GGAAAAGTAAATGTGTTGGA+AGG - chr1_3:52030147-52030166 Msa0124320:intron 35.0%
TTGTAATTGGGAAAACAAGG+TGG + chr1_3:52030223-52030242 None:intergenic 35.0%
! TTCAGTTGTGGCTTGTAATT+GGG + chr1_3:52030235-52030254 None:intergenic 35.0%
! TTTCAGTTGTGGCTTGTAAT+TGG + chr1_3:52030236-52030255 None:intergenic 35.0%
! CTCGGAAAATAACAACCTTT+TGG - chr1_3:52030269-52030288 Msa0124320:intron 35.0%
!! ATCTTTCAGAATTTGCTGAG+TGG + chr1_3:52030436-52030455 None:intergenic 35.0%
TGAAAAGCAACACAGTGAAT+TGG - chr1_3:52030458-52030477 Msa0124320:intron 35.0%
TAAAAAGGTAGAAGAGCTAC+TGG - chr1_3:52030524-52030543 Msa0124320:CDS 35.0%
TGGTTTCTCTATATTCCCAA+AGG - chr1_3:52030544-52030563 Msa0124320:CDS 35.0%
GGTTTCTCTATATTCCCAAA+GGG - chr1_3:52030545-52030564 Msa0124320:CDS 35.0%
GAAGTTGAATGAAGATGAAG+TGG - chr1_3:52030587-52030606 Msa0124320:CDS 35.0%
GTATCCAAGATTTGGAGAAA+AGG - chr1_3:52030730-52030749 Msa0124320:intron 35.0%
! AGTTCCTTTTCTCCAAATCT+TGG + chr1_3:52030737-52030756 None:intergenic 35.0%
TTGAAGACTCTTGACATTCA+CGG - chr1_3:52030912-52030931 Msa0124320:CDS 35.0%
! GTTTTCCATGTATATGGTTC+AGG + chr1_3:52030980-52030999 None:intergenic 35.0%
! GTCTTTTGACACGATTTTCA+AGG - chr1_3:52031016-52031035 Msa0124320:intron 35.0%
AGAAAAACAAGAACTTGACG+AGG - chr1_3:52031121-52031140 Msa0124320:intron 35.0%
AAAGAATCAGGAGTTGAAGT+TGG - chr1_3:52031205-52031224 Msa0124320:intron 35.0%
TTGAAGTTGGCAATAAGCAA+AGG - chr1_3:52031218-52031237 Msa0124320:intron 35.0%
TGAAGAGAAAAACTCCTTGA+TGG - chr1_3:52031349-52031368 Msa0124320:intron 35.0%
GAAGAGAAAAACTCCTTGAT+GGG - chr1_3:52031350-52031369 Msa0124320:intron 35.0%
ATCTTCAAATCTTCCCATCA+AGG + chr1_3:52031366-52031385 None:intergenic 35.0%
AAGATTTGAAGATCTGAGTG+AGG - chr1_3:52031373-52031392 Msa0124320:intron 35.0%
CGGTTCAGAAAATAATAACC+TGG - chr1_3:52031535-52031554 Msa0124320:intron 35.0%
CTTGTCAGATTAGGAATGAA+AGG - chr1_3:52031684-52031703 Msa0124320:intron 35.0%
! GATTAGATATGATGATGCCA+AGG - chr1_3:52031811-52031830 Msa0124320:intron 35.0%
! TTAGATATGATGATGCCAAG+GGG - chr1_3:52031813-52031832 Msa0124320:intron 35.0%
! ATCCAAGCTCTTCATTTTGA+CGG + chr1_3:52031889-52031908 None:intergenic 35.0%
!! ATTTCTGGTTCACTTCACTT+AGG + chr1_3:52031913-52031932 None:intergenic 35.0%
AAGTGAAGTGAACCAGAAAT+TGG - chr1_3:52031913-52031932 Msa0124320:intron 35.0%
TCATTTCAGACTCCAATTTC+TGG + chr1_3:52031928-52031947 None:intergenic 35.0%
! TTTCTTCAAGTTCTTGGTGT+AGG + chr1_3:52031955-52031974 None:intergenic 35.0%
! GCTTAGTTTCTTCAAGTTCT+TGG + chr1_3:52031961-52031980 None:intergenic 35.0%
TCAATGAAACACTGCTTCAA+GGG - chr1_3:52032086-52032105 Msa0124320:intron 35.0%
CATAAACTACTCGAAAGACA+TGG - chr1_3:52032150-52032169 Msa0124320:intron 35.0%
! GAATTAGTTAGCAAGTTGGA+AGG - chr1_3:52032190-52032209 Msa0124320:intron 35.0%
GAATGATTGTGTTACATCTC+TGG - chr1_3:52032270-52032289 Msa0124320:intron 35.0%
TCATGACTATGAAAAACCAG+AGG - chr1_3:52032321-52032340 Msa0124320:intron 35.0%
TTGGTTACAAGTAGAAAAGG+AGG + chr1_3:52032444-52032463 None:intergenic 35.0%
GTTCTATAATCACCATTTCC+AGG - chr1_3:52032505-52032524 Msa0124320:intron 35.0%
!! TCTCATTTCAACATTGGCTT+TGG + chr1_3:52032684-52032703 None:intergenic 35.0%
AGGAGATTGAACAGAAAATG+GGG - chr1_3:52032720-52032739 Msa0124320:intron 35.0%
AACAGAAAATGGGGAGTTTA+AGG - chr1_3:52032729-52032748 Msa0124320:intron 35.0%
ATCTCAGTTACAGGATTATC+TGG + chr1_3:52032755-52032774 None:intergenic 35.0%
! TGATCAAGCATGATGTCTTT+TGG + chr1_3:52032788-52032807 None:intergenic 35.0%
TTCATCATATGGAGTAAGCA+GGG - chr1_3:52032820-52032839 Msa0124320:intron 35.0%
! ATGATCATATGCTTGAGTTG+TGG - chr1_3:52032861-52032880 Msa0124320:intron 35.0%
! TGATCATATGCTTGAGTTGT+GGG - chr1_3:52032862-52032881 Msa0124320:intron 35.0%
TGATAAGACACAGAAGATTG+CGG - chr1_3:52032892-52032911 Msa0124320:intron 35.0%
ACATACAACAAACATCCTTC+AGG - chr1_3:52032959-52032978 Msa0124320:intron 35.0%
AGATCTCAAGAAGAATGTCA+CGG - chr1_3:52033023-52033042 Msa0124320:intron 35.0%
TGAAGAAGACAACAAGAGTA+GGG - chr1_3:52033051-52033070 Msa0124320:intron 35.0%
CTCTTTAACGGTATCATACT+CGG + chr1_3:52033188-52033207 None:intergenic 35.0%
AGCTTCAAACTGCTCTTTAA+CGG + chr1_3:52033200-52033219 None:intergenic 35.0%
TCATCAGAATCAGATGAGAT+TGG - chr1_3:52033310-52033329 Msa0124320:intron 35.0%
CAGAGAGGATCAGAAAAAAT+AGG - chr1_3:52033367-52033386 Msa0124320:intron 35.0%
AGAAATCAATCACCCTTAGT+GGG + chr1_3:52033583-52033602 None:intergenic 35.0%
!! TTTCTGGTTTAATGCATGTG+TGG - chr1_3:52033808-52033827 Msa0124320:CDS 35.0%
ATGTGTGGATATACTTACAG+TGG - chr1_3:52033823-52033842 Msa0124320:CDS 35.0%
TGTGTGGATATACTTACAGT+GGG - chr1_3:52033824-52033843 Msa0124320:CDS 35.0%
CAACAACACTATGACGATGA+TGG - chr1_3:52024106-52024125 Msa0124320:three_prime_UTR 40.0%
TGGGTTGTTAACAATGACAG+TGG - chr1_3:52024126-52024145 Msa0124320:three_prime_UTR 40.0%
CAAAATGAGAGAGAAAGAGG+AGG - chr1_3:52024212-52024231 Msa0124320:three_prime_UTR 40.0%
GCAAAGCCTCATGAAATCAA+GGG - chr1_3:52024389-52024408 Msa0124320:CDS 40.0%
GACTAAAATTCGACGGTTAC+GGG + chr1_3:52024452-52024471 None:intergenic 40.0%
GGACTAAAATTCGACGGTTA+CGG + chr1_3:52024453-52024472 None:intergenic 40.0%
TTTAGTCCATTATGGAGGGT+AGG - chr1_3:52024465-52024484 Msa0124320:CDS 40.0%
!! TAGGAATTGGTCTTTGCTAG+GGG + chr1_3:52024717-52024736 None:intergenic 40.0%
!! GTAGGAATTGGTCTTTGCTA+GGG + chr1_3:52024718-52024737 None:intergenic 40.0%
GGTCATGCTAGGAATTGTTT+GGG + chr1_3:52024758-52024777 None:intergenic 40.0%
GTGATTATTAGGGATGGTGT+TGG + chr1_3:52024907-52024926 None:intergenic 40.0%
TGATCCGTGATTATTAGGGA+TGG + chr1_3:52024913-52024932 None:intergenic 40.0%
GTGCTTGATCCGTGATTATT+AGG + chr1_3:52024918-52024937 None:intergenic 40.0%
AATAATCACGGATCAAGCAC+CGG - chr1_3:52024918-52024937 Msa0124320:CDS 40.0%
ATAGCCGCAATTACCAAATC+TGG + chr1_3:52024944-52024963 None:intergenic 40.0%
!! TTTGGGTGTTTTTAAGGAGG+TGG + chr1_3:52025651-52025670 None:intergenic 40.0%
! AATGGCTTCAAAATAGTGGG+TGG + chr1_3:52026279-52026298 None:intergenic 40.0%
GCGAATGGCTTCAAAATAGT+GGG + chr1_3:52026282-52026301 None:intergenic 40.0%
AGCGAATGGCTTCAAAATAG+TGG + chr1_3:52026283-52026302 None:intergenic 40.0%
!!! ACTATTTTGAAGCCATTCGC+TGG - chr1_3:52026282-52026301 Msa0124320:CDS 40.0%
!!! TTGATTTTGGTTAGCTGGGT+TGG + chr1_3:52026326-52026345 None:intergenic 40.0%
!!! GGCTTTTGATTTTGGTTAGC+TGG + chr1_3:52026331-52026350 None:intergenic 40.0%
!! CTGTGTTTTTGCACAACTCA+CGG - chr1_3:52026418-52026437 Msa0124320:CDS 40.0%
TCACGGAGATCTAACTAACA+TGG - chr1_3:52026435-52026454 Msa0124320:CDS 40.0%
CACGGAGATCTAACTAACAT+GGG - chr1_3:52026436-52026455 Msa0124320:CDS 40.0%
! CATACCTGATTGGTTGAACT+TGG + chr1_3:52027009-52027028 None:intergenic 40.0%
AAGCAGAAACTGTGATGACT+TGG - chr1_3:52027156-52027175 Msa0124320:CDS 40.0%
TTGCCTCTTCATGTCTTTCA+AGG - chr1_3:52027216-52027235 Msa0124320:CDS 40.0%
AATAGAACAGAAAGCGGTGA+TGG - chr1_3:52027259-52027278 Msa0124320:CDS 40.0%
ATTCTCCTAGAATCTGCATG+AGG + chr1_3:52027299-52027318 None:intergenic 40.0%
CTAGGAGAATGTATTCTTGG+TGG - chr1_3:52027309-52027328 Msa0124320:CDS 40.0%
! GAGAATGTATTCTTGGTGGT+GGG - chr1_3:52027313-52027332 Msa0124320:CDS 40.0%
TTGAGTTCTTGGGACTTATG+TGG + chr1_3:52027343-52027362 None:intergenic 40.0%
!!! TGGAGCCATTTTGAGTTCTT+GGG + chr1_3:52027353-52027372 None:intergenic 40.0%
!!! TTGGAGCCATTTTGAGTTCT+TGG + chr1_3:52027354-52027373 None:intergenic 40.0%
TGGCTCCAAGAAAATCTTAC+AGG - chr1_3:52027365-52027384 Msa0124320:CDS 40.0%
CTTGACACATTCATGGTTTG+AGG - chr1_3:52027462-52027481 Msa0124320:CDS 40.0%
TATCTCGTGATGCACAGATA+TGG - chr1_3:52028115-52028134 Msa0124320:CDS 40.0%
GAGAGATATGATCATGCAAC+TGG - chr1_3:52028278-52028297 Msa0124320:CDS 40.0%
ATTAGGAAATGCTTCAGCCA+TGG + chr1_3:52028327-52028346 None:intergenic 40.0%
AGTCCAGAAATGTACGTGAA+GGG + chr1_3:52028430-52028449 None:intergenic 40.0%
CAAACTTTGCATGTTCTCGA+GGG + chr1_3:52028565-52028584 None:intergenic 40.0%
TCAAACTTTGCATGTTCTCG+AGG + chr1_3:52028566-52028585 None:intergenic 40.0%
CGAGAACATGCAAAGTTTGA+AGG - chr1_3:52028566-52028585 Msa0124320:CDS 40.0%
!!! GCTCAATTTTTTAGAGACGC+AGG - chr1_3:52028604-52028623 Msa0124320:CDS 40.0%
!!! CAATTTTTTAGAGACGCAGG+AGG - chr1_3:52028607-52028626 Msa0124320:CDS 40.0%
GACAGTAGTGAGCTAAACAA+TGG - chr1_3:52028629-52028648 Msa0124320:CDS 40.0%
AGTAGTGAGCTAAACAATGG+AGG - chr1_3:52028632-52028651 Msa0124320:CDS 40.0%
AAAAGCGGAGGCAGAAATTT+CGG - chr1_3:52028700-52028719 Msa0124320:CDS 40.0%
TTTGGCAAGGGCTTTCTTTA+AGG + chr1_3:52028726-52028745 None:intergenic 40.0%
AAAGAAAGCCCTTGCCAAAT+TGG - chr1_3:52028727-52028746 Msa0124320:CDS 40.0%
TTGGAAGATGAAAAGGAAGC+TGG - chr1_3:52028746-52028765 Msa0124320:CDS 40.0%
AGTTGAAGTTCGAGACTTGA+AGG - chr1_3:52028877-52028896 Msa0124320:CDS 40.0%
TTTCAGCTTCTACTCGAACA+AGG + chr1_3:52029075-52029094 None:intergenic 40.0%
TGTTCGAGTAGAAGCTGAAA+AGG - chr1_3:52029075-52029094 Msa0124320:CDS 40.0%
CTCGGAGACATTATCAAAAC+TGG - chr1_3:52029126-52029145 Msa0124320:CDS 40.0%
GGAGACATTATCAAAACTGG+AGG - chr1_3:52029129-52029148 Msa0124320:CDS 40.0%
GGAGAGATTAAAAGAATCCG+AGG - chr1_3:52029150-52029169 Msa0124320:CDS 40.0%
AATCCGAGGAGAATGTTAGA+AGG - chr1_3:52029164-52029183 Msa0124320:CDS 40.0%
GATCCTTCTAACATTCTCCT+CGG + chr1_3:52029170-52029189 None:intergenic 40.0%
! TCTCCAAGCATTGCTGATAT+CGG + chr1_3:52029282-52029301 None:intergenic 40.0%
CTTGGAGATAATTTCCAGTC+TGG - chr1_3:52029294-52029313 Msa0124320:CDS 40.0%
AGAGAGTTTATGTTCCAGAC+TGG + chr1_3:52029311-52029330 None:intergenic 40.0%
TAAACTCTCTTGTGCTGAAG+AGG - chr1_3:52029321-52029340 Msa0124320:CDS 40.0%
!! ACTTTGGAGTTCCTTACAAG+AGG - chr1_3:52029522-52029541 Msa0124320:CDS 40.0%
GCATTTGCATTCTCAATCTC+AGG - chr1_3:52029591-52029610 Msa0124320:CDS 40.0%
!! TGCTGACTTTCACAGTAAAG+TGG - chr1_3:52029633-52029652 Msa0124320:CDS 40.0%
ATCACGTAAACAGTCTCTAG+AGG - chr1_3:52029675-52029694 Msa0124320:CDS 40.0%
TGAAGTGCACAGATTCAATG+AGG - chr1_3:52029699-52029718 Msa0124320:CDS 40.0%
ACATGAAGCTATGATTGACG+AGG - chr1_3:52029912-52029931 Msa0124320:intron 40.0%
GGCTGAAAAAGATGAGAAAC+TGG - chr1_3:52030023-52030042 Msa0124320:intron 40.0%
! AGATGAGAAACTGGCTCTTA+TGG - chr1_3:52030032-52030051 Msa0124320:intron 40.0%
TTTCTCCAAAAGCTTCTCCA+TGG + chr1_3:52030070-52030089 None:intergenic 40.0%
CTCAGCATTCAAGTCTGAAA+TGG + chr1_3:52030112-52030131 None:intergenic 40.0%
TTCAGACTTGAATGCTGAGT+TGG - chr1_3:52030113-52030132 Msa0124320:intron 40.0%
GGCTTGTAATTGGGAAAACA+AGG + chr1_3:52030226-52030245 None:intergenic 40.0%
! CTTCTCAAGCTTTTCAGTTG+TGG + chr1_3:52030247-52030266 None:intergenic 40.0%
TGAAAAGCTTGAGAAGCTCT+CGG - chr1_3:52030251-52030270 Msa0124320:intron 40.0%
ACCGAACTTGATGTACTAAG+AGG - chr1_3:52030315-52030334 Msa0124320:intron 40.0%
CCCTCTTAGTACATCAAGTT+CGG + chr1_3:52030319-52030338 None:intergenic 40.0%
CCGAACTTGATGTACTAAGA+GGG - chr1_3:52030316-52030335 Msa0124320:intron 40.0%
! ACTTTTCATGGTCAAGTGAC+TGG + chr1_3:52030368-52030387 None:intergenic 40.0%
!! GGTGTTCAACTCTGAAACTA+AGG + chr1_3:52030415-52030434 None:intergenic 40.0%
AAGGGAGTCGTCACTTAAAA+AGG - chr1_3:52030509-52030528 Msa0124320:intron 40.0%
TGAAAGAAGATGCAAAGTGC+CGG - chr1_3:52030637-52030656 Msa0124320:CDS 40.0%
! GCAGAAGTGTATCCAAGATT+TGG - chr1_3:52030722-52030741 Msa0124320:intron 40.0%
GTATATGGTTCAGGAGAGTT+CGG + chr1_3:52030971-52030990 None:intergenic 40.0%
ACTCTCCTGAACCATATACA+TGG - chr1_3:52030972-52030991 Msa0124320:intron 40.0%
GATACAGTCTAAGCAGTTCA+CGG - chr1_3:52031151-52031170 Msa0124320:intron 40.0%
AAGCAAAGGAGAAGAGAGAA+TGG - chr1_3:52031232-52031251 Msa0124320:intron 40.0%
AAAGAGCCACAACAACTTAC+AGG - chr1_3:52031307-52031326 Msa0124320:intron 40.0%
AGATTGAACGAATGTCTCGT+GGG + chr1_3:52031435-52031454 None:intergenic 40.0%
TAGATTGAACGAATGTCTCG+TGG + chr1_3:52031436-52031455 None:intergenic 40.0%
GGTCAAGAACTTGATAAGCT+CGG - chr1_3:52031515-52031534 Msa0124320:intron 40.0%
TTATCTTCAATCTGTCCTCC+AGG + chr1_3:52031556-52031575 None:intergenic 40.0%
GGAGGACAGATTGAAGATAA+TGG - chr1_3:52031556-52031575 Msa0124320:intron 40.0%
AAGGGACATGTTGTGTCAAA+AGG - chr1_3:52031703-52031722 Msa0124320:intron 40.0%
GTGTAAAGCATGAAACGTCT+TGG + chr1_3:52031750-52031769 None:intergenic 40.0%
AACAGAATTGCAAAGAACGG+CGG - chr1_3:52031778-52031797 Msa0124320:intron 40.0%
TTTCCAATTGTCCTCAGACA+AGG - chr1_3:52031862-52031881 Msa0124320:intron 40.0%
GTCAATGAAACACTGCTTCA+AGG - chr1_3:52032085-52032104 Msa0124320:intron 40.0%
ACATGTATCAGCTAGCTCAA+AGG + chr1_3:52032116-52032135 None:intergenic 40.0%
! AGCAAGTTGGAAGGTGAAAA+TGG - chr1_3:52032199-52032218 Msa0124320:intron 40.0%
! GCAAGTTGGAAGGTGAAAAT+GGG - chr1_3:52032200-52032219 Msa0124320:intron 40.0%
!! CATTCAAAGCACTGATAGCT+GGG + chr1_3:52032255-52032274 None:intergenic 40.0%
!! TCATTCAAAGCACTGATAGC+TGG + chr1_3:52032256-52032275 None:intergenic 40.0%
GAGAGAGATTCAAGAAGCAA+AGG - chr1_3:52032700-52032719 Msa0124320:intron 40.0%
AGCACTTCAATCTCAGTTAC+AGG + chr1_3:52032764-52032783 None:intergenic 40.0%
GTTCATCATATGGAGTAAGC+AGG - chr1_3:52032819-52032838 Msa0124320:intron 40.0%
TCATCATATGGAGTAAGCAG+GGG - chr1_3:52032821-52032840 Msa0124320:intron 40.0%
GTGAAGAAGACAACAAGAGT+AGG - chr1_3:52033050-52033069 Msa0124320:intron 40.0%
! AGACAACAAGAGTAGGGTTT+TGG - chr1_3:52033057-52033076 Msa0124320:intron 40.0%
CTGGTGAAGAATGTAGAAGA+GGG - chr1_3:52033262-52033281 Msa0124320:intron 40.0%
AATAGGACAACTTCAGTTGG+AGG - chr1_3:52033384-52033403 Msa0124320:intron 40.0%
! CACCTTTTTGTGCATGTGTA+AGG - chr1_3:52033554-52033573 Msa0124320:intron 40.0%
CAGAAATCAATCACCCTTAG+TGG + chr1_3:52033584-52033603 None:intergenic 40.0%
GTCTCATGGAATCGAAACTA+TGG + chr1_3:52033607-52033626 None:intergenic 40.0%
GAGGCACAAACATGTACAAA+AGG + chr1_3:52033698-52033717 None:intergenic 40.0%
CCTCTTCTTGCAAATACATG+AGG + chr1_3:52033717-52033736 None:intergenic 40.0%
CCTCATGTATTTGCAAGAAG+AGG - chr1_3:52033714-52033733 Msa0124320:CDS 40.0%
TGTATTTGCAAGAAGAGGCT+AGG - chr1_3:52033719-52033738 Msa0124320:CDS 40.0%
GAATCTTTCCAGGTTCTGCA+AGG - chr1_3:52024182-52024201 Msa0124320:three_prime_UTR 45.0%
GGTGCAGATCCTCTCTATTT+GGG + chr1_3:52024362-52024381 None:intergenic 45.0%
AGGTGCAGATCCTCTCTATT+TGG + chr1_3:52024363-52024382 None:intergenic 45.0%
CGCAAAGCCTCATGAAATCA+AGG - chr1_3:52024388-52024407 Msa0124320:CDS 45.0%
TCCTCTCCCTTGATTTCATG+AGG + chr1_3:52024398-52024417 None:intergenic 45.0%
GTGACTAAGGTCAAATGCTG+TGG + chr1_3:52024625-52024644 None:intergenic 45.0%
!! GGTAGGAATTGGTCTTTGCT+AGG + chr1_3:52024719-52024738 None:intergenic 45.0%
GGGTCATGCTAGGAATTGTT+TGG + chr1_3:52024759-52024778 None:intergenic 45.0%
!! CAAAATAGTGGGTGGAGGAT+TGG + chr1_3:52026271-52026290 None:intergenic 45.0%
!!! ATTTTGGTTAGCTGGGTTGG+TGG + chr1_3:52026323-52026342 None:intergenic 45.0%
GGAGAATGTATTCTTGGTGG+TGG - chr1_3:52027312-52027331 Msa0124320:CDS 45.0%
ATGCTTCCTGTCTGTCTTTC+TGG - chr1_3:52027390-52027409 Msa0124320:CDS 45.0%
TGCATGTAGAATGTCCCTGA+AGG + chr1_3:52027995-52028014 None:intergenic 45.0%
ATGCACAGATATGGACGTCA+AGG - chr1_3:52028124-52028143 Msa0124320:CDS 45.0%
AAGATGCAGATTCCTTTGCC+AGG - chr1_3:52028174-52028193 Msa0124320:CDS 45.0%
ATAGTACATTTCCGCTCTCC+TGG + chr1_3:52028195-52028214 None:intergenic 45.0%
TTATAGGGCATACCGTGCAT+TGG - chr1_3:52028253-52028272 Msa0124320:CDS 45.0%
GTCTCCATGGAAGTAACCAT+TGG + chr1_3:52028380-52028399 None:intergenic 45.0%
GAGTCCAGAAATGTACGTGA+AGG + chr1_3:52028431-52028450 None:intergenic 45.0%
GCTTCAGTATCAGCAGAGTT+TGG - chr1_3:52028772-52028791 Msa0124320:CDS 45.0%
AGTTCGAGACTTGAAGGAAG+CGG - chr1_3:52028883-52028902 Msa0124320:CDS 45.0%
GGAAGCGGTAGTGAAATTAC+AGG - chr1_3:52028898-52028917 Msa0124320:CDS 45.0%
AGCTACTCTTCTTCAGTACC+AGG - chr1_3:52028931-52028950 Msa0124320:CDS 45.0%
TCTTCAGTACCAGGAATGCT+TGG - chr1_3:52028940-52028959 Msa0124320:CDS 45.0%
! TCTTTTGCTCAGAAGGATGC+AGG - chr1_3:52028992-52029011 Msa0124320:CDS 45.0%
TGAAGTTGAGTCCTTGAAGC+AGG - chr1_3:52029048-52029067 Msa0124320:CDS 45.0%
TCTCCGATATCAGCAATGCT+TGG - chr1_3:52029276-52029295 Msa0124320:CDS 45.0%
ACAGTCTTTGGCACACAAGA+TGG - chr1_3:52029453-52029472 Msa0124320:CDS 45.0%
CAGTCTTTGGCACACAAGAT+GGG - chr1_3:52029454-52029473 Msa0124320:CDS 45.0%
TCGCAATCTCTCCTCTTGTA+AGG + chr1_3:52029536-52029555 None:intergenic 45.0%
GGAGAGATTGCGATTCATTG+AGG - chr1_3:52029543-52029562 Msa0124320:CDS 45.0%
AAGCTATGATTGACGAGGTC+AGG - chr1_3:52029917-52029936 Msa0124320:intron 45.0%
! TCCACAATGCTTTGGCTCAT+CGG - chr1_3:52029954-52029973 Msa0124320:intron 45.0%
AGACGAGAACTCAAAGCTGA+AGG - chr1_3:52029990-52030009 Msa0124320:intron 45.0%
AAAGCTGAAGGAGACATGTG+AGG - chr1_3:52030002-52030021 Msa0124320:intron 45.0%
! GGAAACCATGGAGAAGCTTT+TGG - chr1_3:52030062-52030081 Msa0124320:intron 45.0%
ATTTCTCCACAAGCAGAGAC+TGG + chr1_3:52030179-52030198 None:intergenic 45.0%
ATCAACTCTTGCTGCTGAGA+AGG - chr1_3:52030197-52030216 Msa0124320:intron 45.0%
TCTGCAATGCTCTTCCCTTT+GGG + chr1_3:52030562-52030581 None:intergenic 45.0%
TGAAGATGAAGTGGCCAACA+AGG - chr1_3:52030596-52030615 Msa0124320:CDS 45.0%
! GAAAGAAGATGCAAAGTGCC+GGG - chr1_3:52030638-52030657 Msa0124320:CDS 45.0%
ACAAGAATACGAGGAGGAAC+TGG - chr1_3:52030662-52030681 Msa0124320:CDS 45.0%
AAAGTCTCTGGCACTCAACT+AGG + chr1_3:52030767-52030786 None:intergenic 45.0%
! AGTTGAGTGCCAGAGACTTT+TGG - chr1_3:52030767-52030786 Msa0124320:intron 45.0%
TTTCAAGGAAAGCCACCACT+TGG - chr1_3:52031031-52031050 Msa0124320:intron 45.0%
AATTCTCAATGGCCAAGTGG+TGG + chr1_3:52031046-52031065 None:intergenic 45.0%
CTGAATTCTCAATGGCCAAG+TGG + chr1_3:52031049-52031068 None:intergenic 45.0%
GAACTGCTTAGACTGTATCC+TGG + chr1_3:52031150-52031169 None:intergenic 45.0%
TGAAGATCTGAGTGAGGAGA+AGG - chr1_3:52031379-52031398 Msa0124320:intron 45.0%
GAAGATCTGAGTGAGGAGAA+GGG - chr1_3:52031380-52031399 Msa0124320:intron 45.0%
CTCCAGGAACTTAAACAGCT+TGG - chr1_3:52031494-52031513 Msa0124320:intron 45.0%
! GACCAAGCTGTTTAAGTTCC+TGG + chr1_3:52031499-52031518 None:intergenic 45.0%
! TTGCTCTTCAAGTTTCCCCT+TGG + chr1_3:52031831-52031850 None:intergenic 45.0%
!! ATTTTGACGGTCCTTGTCTG+AGG + chr1_3:52031876-52031895 None:intergenic 45.0%
GACCGTCAAAATGAAGAGCT+TGG - chr1_3:52031884-52031903 Msa0124320:intron 45.0%
GATTGAACAATGGGAAACCC+AGG - chr1_3:52032027-52032046 Msa0124320:intron 45.0%
AGAACTCTTTGCTGAACTGC+AGG - chr1_3:52032054-52032073 Msa0124320:intron 45.0%
TGAAACACTGCTTCAAGGGA+AGG - chr1_3:52032090-52032109 Msa0124320:intron 45.0%
TTTCATTGATCCTCCTCTGC+AGG + chr1_3:52032628-52032647 None:intergenic 45.0%
!! TCGTCAAAGAAGAGCATCCA+AGG - chr1_3:52032934-52032953 Msa0124320:intron 45.0%
ACATCCTTCAGGAGATTCCT+TGG - chr1_3:52032970-52032989 Msa0124320:intron 45.0%
AGGAGATTCCTTGGTGGAAA+AGG - chr1_3:52032979-52032998 Msa0124320:intron 45.0%
TTCCTTGGTGGAAAAGGAGT+TGG - chr1_3:52032985-52033004 Msa0124320:intron 45.0%
TCCTTGGTGGAAAAGGAGTT+GGG - chr1_3:52032986-52033005 Msa0124320:intron 45.0%
! CTCTTGTTGTCTTCTTCACG+TGG + chr1_3:52033049-52033068 None:intergenic 45.0%
! AGAGCAGTTTGAAGCTTCTC+AGG - chr1_3:52033204-52033223 Msa0124320:intron 45.0%
CTACATTCTTCACCAGCTTG+CGG + chr1_3:52033258-52033277 None:intergenic 45.0%
GCTGGTGAAGAATGTAGAAG+AGG - chr1_3:52033261-52033280 Msa0124320:intron 45.0%
!! ATGAGATTGGAAGTGTCAGC+AGG - chr1_3:52033323-52033342 Msa0124320:intron 45.0%
CCAAAATGGCCGATCAAAGT+CGG - chr1_3:52033467-52033486 Msa0124320:intron 45.0%
ACGTACTCTCCGACTTTGAT+CGG + chr1_3:52033479-52033498 None:intergenic 45.0%
! AAAGTCGGAGAGTACGTTTG+CGG - chr1_3:52033482-52033501 Msa0124320:intron 45.0%
CGTTTGCGGGATTATCTCTA+TGG - chr1_3:52033496-52033515 Msa0124320:intron 45.0%
GGCCTTACACATGCACAAAA+AGG + chr1_3:52033559-52033578 None:intergenic 45.0%
AATCAATCACCCTTAGTGGG+TGG + chr1_3:52033580-52033599 None:intergenic 45.0%
TTTGCAAGAAGAGGCTAGGA+TGG - chr1_3:52033723-52033742 Msa0124320:CDS 45.0%
!!! AGTAAATATTATATTTTTAA+GGG + chr1_3:52024779-52024798 None:intergenic 5.0%
!!! AAGTAAATATTATATTTTTA+AGG + chr1_3:52024780-52024799 None:intergenic 5.0%
!! ATATATAATGAAATTAAAAT+TGG - chr1_3:52025172-52025191 Msa0124320:CDS 5.0%
!!! AAAAAATAATCAAAATTTTA+TGG + chr1_3:52026511-52026530 None:intergenic 5.0%
!! ATTATCATAAAAAATAAATA+TGG + chr1_3:52028070-52028089 None:intergenic 5.0%
AAGATCCCGACCCTCTACTA+TGG - chr1_3:52024056-52024075 Msa0124320:three_prime_UTR 50.0%
GCCTCATGAAATCAAGGGAG+AGG - chr1_3:52024394-52024413 Msa0124320:CDS 50.0%
CATCCGTAACCGCTTTCCAA+CGG + chr1_3:52024422-52024441 None:intergenic 50.0%
AGTCCATTATGGAGGGTAGG+AGG - chr1_3:52024468-52024487 Msa0124320:CDS 50.0%
TTGCCTCCTACCCTCCATAA+TGG + chr1_3:52024474-52024493 None:intergenic 50.0%
CTAAGGTCAAATGCTGTGGC+CGG + chr1_3:52024621-52024640 None:intergenic 50.0%
!! CACAGTTGGTGTCGTGACTA+AGG + chr1_3:52024638-52024657 None:intergenic 50.0%
CCGCAATTACCAAATCTGGC+CGG + chr1_3:52024940-52024959 None:intergenic 50.0%
! CCGGCCAGATTTGGTAATTG+CGG - chr1_3:52024937-52024956 Msa0124320:CDS 50.0%
!! GGCTTCAAAATAGTGGGTGG+AGG + chr1_3:52026276-52026295 None:intergenic 50.0%
! TTTGAAGCCATTCGCTGGTG+AGG - chr1_3:52026287-52026306 Msa0124320:CDS 50.0%
TTGAAGCCATTCGCTGGTGA+GGG - chr1_3:52026288-52026307 Msa0124320:CDS 50.0%
! ACAGAAAGCGGTGATGGCTA+CGG - chr1_3:52027265-52027284 Msa0124320:CDS 50.0%
CCAAAGCCAGAAAGACAGAC+AGG + chr1_3:52027399-52027418 None:intergenic 50.0%
!! CCTGTCTGTCTTTCTGGCTT+TGG - chr1_3:52027396-52027415 Msa0124320:CDS 50.0%
ACCATAGATGTTGCAGCGTG+TGG - chr1_3:52027930-52027949 Msa0124320:CDS 50.0%
ACCACACGCTGCAACATCTA+TGG + chr1_3:52027934-52027953 None:intergenic 50.0%
AGATTCCTTTGCCAGGAGAG+CGG - chr1_3:52028181-52028200 Msa0124320:CDS 50.0%
GCGCCCAGAGCTTATGAAAA+TGG - chr1_3:52028220-52028239 Msa0124320:CDS 50.0%
CATATCTCTCGGCCAATGCA+CGG + chr1_3:52028268-52028287 None:intergenic 50.0%
GAGTGATCCGTCATGCTCAT+CGG - chr1_3:52028300-52028319 Msa0124320:CDS 50.0%
CCAGAAATGTACGTGAAGGG+TGG + chr1_3:52028427-52028446 None:intergenic 50.0%
CCACCCTTCACGTACATTTC+TGG - chr1_3:52028424-52028443 Msa0124320:CDS 50.0%
TTGCATGTTCTCGAGGGATG+AGG + chr1_3:52028559-52028578 None:intergenic 50.0%
! AGTTTGAAGGGCATGCTCGA+AGG - chr1_3:52028579-52028598 Msa0124320:CDS 50.0%
! GTTTGAAGGGCATGCTCGAA+GGG - chr1_3:52028580-52028599 Msa0124320:CDS 50.0%
! TTTGAAGGGCATGCTCGAAG+GGG - chr1_3:52028581-52028600 Msa0124320:CDS 50.0%
AGACATGAGCCTTAGTGCCA+CGG + chr1_3:52028658-52028677 None:intergenic 50.0%
GTCTGAACGCGTGACAAAAG+CGG - chr1_3:52028685-52028704 Msa0124320:CDS 50.0%
TCGAACAAGGTCCTGCTTCA+AGG + chr1_3:52029062-52029081 None:intergenic 50.0%
ACTCTCTTGTGCTGAAGAGG+AGG - chr1_3:52029324-52029343 Msa0124320:CDS 50.0%
!! ACCGATGAGCCAAAGCATTG+TGG + chr1_3:52029958-52029977 None:intergenic 50.0%
! GCTGAGTTGGATAGTGTCAG+AGG - chr1_3:52030126-52030145 Msa0124320:intron 50.0%
AACATGCCAGTCTCTGCTTG+TGG - chr1_3:52030170-52030189 Msa0124320:intron 50.0%
CTCTGCAATGCTCTTCCCTT+TGG + chr1_3:52030563-52030582 None:intergenic 50.0%
CCTCCTCGTATTCTTGTTCC+CGG + chr1_3:52030659-52030678 None:intergenic 50.0%
TCTCTGGCACTCAACTAGGA+GGG + chr1_3:52030763-52030782 None:intergenic 50.0%
! TGAGTGCCAGAGACTTTTGG+AGG - chr1_3:52030770-52030789 Msa0124320:intron 50.0%
TGGATGCCTCCAAAAGTCTC+TGG + chr1_3:52030779-52030798 None:intergenic 50.0%
AAGAACTTGACGAGGAGTCC+AGG - chr1_3:52031129-52031148 Msa0124320:intron 50.0%
GAGTGAGGAGAAGGGTAACT+TGG - chr1_3:52031388-52031407 Msa0124320:intron 50.0%
GGTCCTTGTCTGAGGACAAT+TGG + chr1_3:52031868-52031887 None:intergenic 50.0%
AGCAAAGAGTTCTGCAGCCT+GGG + chr1_3:52032047-52032066 None:intergenic 50.0%
! TCTCTGGAGATGCAGACTCT+TGG - chr1_3:52032286-52032305 Msa0124320:intron 50.0%
TCATATGGAGTAAGCAGGGG+AGG - chr1_3:52032824-52032843 Msa0124320:intron 50.0%
ACAGAAGATTGCGGCAGAAC+CGG - chr1_3:52032901-52032920 Msa0124320:intron 50.0%
CTTTGACGACGATCTACTGC+CGG + chr1_3:52032923-52032942 None:intergenic 50.0%
TCCTTCAGGAGATTCCTTGG+TGG - chr1_3:52032973-52032992 Msa0124320:intron 50.0%
TCCACCAAGGAATCTCCTGA+AGG + chr1_3:52032977-52032996 None:intergenic 50.0%
CCTTGGTGGAAAAGGAGTTG+GGG - chr1_3:52032987-52033006 Msa0124320:intron 50.0%
CTTGGTGGAAAAGGAGTTGG+GGG - chr1_3:52032988-52033007 Msa0124320:intron 50.0%
ATTCTTCACCAGCTTGCGGT+TGG + chr1_3:52033254-52033273 None:intergenic 50.0%
!! AGATTGGAAGTGTCAGCAGG+AGG - chr1_3:52033326-52033345 Msa0124320:intron 50.0%
TGTCAGCAGGAGGAGAGTTT+CGG - chr1_3:52033336-52033355 Msa0124320:intron 50.0%
! CCGACTTTGATCGGCCATTT+TGG + chr1_3:52033470-52033489 None:intergenic 50.0%
! AAGTCGGAGAGTACGTTTGC+GGG - chr1_3:52033483-52033502 Msa0124320:intron 50.0%
ATGTGTAAGGCCACCCACTA+AGG - chr1_3:52033567-52033586 Msa0124320:intron 50.0%
TGTGTAAGGCCACCCACTAA+GGG - chr1_3:52033568-52033587 Msa0124320:intron 50.0%
ATCCCGACCCTCTACTATGG+TGG - chr1_3:52024059-52024078 Msa0124320:three_prime_UTR 55.0%
CATCGCGCCACCATAGTAGA+GGG + chr1_3:52024069-52024088 None:intergenic 55.0%
TCATCGCGCCACCATAGTAG+AGG + chr1_3:52024070-52024089 None:intergenic 55.0%
GACTTCAGCCTTGCAGAACC+TGG + chr1_3:52024193-52024212 None:intergenic 55.0%
TCATGAGGCTTTGCGCTCTC+AGG + chr1_3:52024383-52024402 None:intergenic 55.0%
AATCAAGGGAGAGGAGCCGT+TGG - chr1_3:52024403-52024422 Msa0124320:CDS 55.0%
GAGCCGTTGGAAAGCGGTTA+CGG - chr1_3:52024416-52024435 Msa0124320:CDS 55.0%
CGTTGGAAAGCGGTTACGGA+TGG - chr1_3:52024420-52024439 Msa0124320:CDS 55.0%
ATGACGAGACAGTGACCTGG+GGG + chr1_3:52024694-52024713 None:intergenic 55.0%
GATGACGAGACAGTGACCTG+GGG + chr1_3:52024695-52024714 None:intergenic 55.0%
GGATGACGAGACAGTGACCT+GGG + chr1_3:52024696-52024715 None:intergenic 55.0%
!! GATCAAGCACCGGCCAGATT+TGG - chr1_3:52024928-52024947 Msa0124320:CDS 55.0%
TGAAGCCATTCGCTGGTGAG+GGG - chr1_3:52026289-52026308 Msa0124320:CDS 55.0%
TTTGTCCCCTCACCAGCGAA+TGG + chr1_3:52026297-52026316 None:intergenic 55.0%
CTCGGCCTCATGCAGATTCT+AGG - chr1_3:52027291-52027310 Msa0124320:CDS 55.0%
CATTTCCGCTCTCCTGGCAA+AGG + chr1_3:52028189-52028208 None:intergenic 55.0%
CCATGGTCCGATGAGCATGA+CGG + chr1_3:52028310-52028329 None:intergenic 55.0%
! AGTACGTGGCTCTGTCTCCA+TGG + chr1_3:52028393-52028412 None:intergenic 55.0%
!! TGGCGTGTTTCTGGAGTACG+TGG + chr1_3:52028407-52028426 None:intergenic 55.0%
! TTGAAGGGCATGCTCGAAGG+GGG - chr1_3:52028582-52028601 Msa0124320:CDS 55.0%
GAGCTAAACAATGGAGGCCG+TGG - chr1_3:52028638-52028657 Msa0124320:CDS 55.0%
TGAACGCGTGACAAAAGCGG+AGG - chr1_3:52028688-52028707 Msa0124320:CDS 55.0%
GTGCCGGGAACAAGAATACG+AGG - chr1_3:52030653-52030672 Msa0124320:CDS 55.0%
CCGGGAACAAGAATACGAGG+AGG - chr1_3:52030656-52030675 Msa0124320:CDS 55.0%
GTCTCTGGCACTCAACTAGG+AGG + chr1_3:52030764-52030783 None:intergenic 55.0%
ACTAAGGGTTGGGCTGCATC+AGG - chr1_3:52030887-52030906 Msa0124320:CDS 55.0%
GAACGAATGTCTCGTGGGAC+AGG + chr1_3:52031430-52031449 None:intergenic 55.0%
CAGCAAAGAGTTCTGCAGCC+TGG + chr1_3:52032048-52032067 None:intergenic 55.0%
TGGAAGTCGAGGAGAGGATC+TGG + chr1_3:52032602-52032621 None:intergenic 55.0%
AGGTCTTGGAAGTCGAGGAG+AGG + chr1_3:52032608-52032627 None:intergenic 55.0%
TCTGCAGGTCTTGGAAGTCG+AGG + chr1_3:52032613-52032632 None:intergenic 55.0%
TCGACTTCCAAGACCTGCAG+AGG - chr1_3:52032612-52032631 Msa0124320:intron 55.0%
ACTTCCAAGACCTGCAGAGG+AGG - chr1_3:52032615-52032634 Msa0124320:intron 55.0%
TGATCCTCCTCTGCAGGTCT+TGG + chr1_3:52032622-52032641 None:intergenic 55.0%
! CCCCAACTCCTTTTCCACCA+AGG + chr1_3:52032990-52033009 None:intergenic 55.0%
AGGGTGCACTGTCTTCAGCT+GGG - chr1_3:52033281-52033300 Msa0124320:intron 55.0%
GTTTCGGAACAAGCGCAGAG+AGG - chr1_3:52033352-52033371 Msa0124320:intron 55.0%
CGCCACCATAGTAGAGGGTC+GGG + chr1_3:52024064-52024083 None:intergenic 60.0%
GCGCCACCATAGTAGAGGGT+CGG + chr1_3:52024065-52024084 None:intergenic 60.0%
! ATGGTGGCGCGATGACGAGT+CGG - chr1_3:52024075-52024094 Msa0124320:three_prime_UTR 60.0%
GGAGAGGAGCCGTTGGAAAG+CGG - chr1_3:52024410-52024429 Msa0124320:CDS 60.0%
GAAAGCGGTTACGGATGGCG+TGG - chr1_3:52024425-52024444 Msa0124320:CDS 60.0%
ACTATCAAGAGCCACCCCCC+AGG - chr1_3:52024676-52024695 Msa0124320:CDS 60.0%
TGACGAGACAGTGACCTGGG+GGG + chr1_3:52024693-52024712 None:intergenic 60.0%
GGGATGACGAGACAGTGACC+TGG + chr1_3:52024697-52024716 None:intergenic 60.0%
CCGTCATGCTCATCGGACCA+TGG - chr1_3:52028307-52028326 Msa0124320:CDS 60.0%
CGTGAAGGGTGGCGTGTTTC+TGG + chr1_3:52028416-52028435 None:intergenic 60.0%
CAATGGAGGCCGTGGCACTA+AGG - chr1_3:52028646-52028665 Msa0124320:CDS 60.0%
! GTGCTGAAGAGGAGGTGCGT+AGG - chr1_3:52029332-52029351 Msa0124320:CDS 60.0%
GGTGGAAAAGGAGTTGGGGG+TGG - chr1_3:52032991-52033010 Msa0124320:intron 60.0%
GTTCGATGCCAACCGCAAGC+TGG - chr1_3:52033243-52033262 Msa0124320:intron 60.0%
! GAGGGTGCACTGTCTTCAGC+TGG - chr1_3:52033280-52033299 Msa0124320:intron 60.0%
! CGGTGATGGCTACGGCGACT+CGG - chr1_3:52027273-52027292 Msa0124320:CDS 65.0%
CGAGACAGTGACCTGGGGGG+TGG + chr1_3:52024690-52024709 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 52024031 52033867 52024031 ID=Msa0124320;Name=Msa0124320
chr1_3 mRNA 52024031 52033867 52024031 ID=Msa0124320-mRNA-1;Parent=Msa0124320;Name=Msa0124320-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.4|0.8|1|1|5|270|1901
chr1_3 exon 52024031 52025371 52024031 ID=Msa0124320-mRNA-1:exon:15956;Parent=Msa0124320-mRNA-1
chr1_3 exon 52025556 52029766 52025556 ID=Msa0124320-mRNA-1:exon:15955;Parent=Msa0124320-mRNA-1
chr1_3 exon 52030512 52030707 52030512 ID=Msa0124320-mRNA-1:exon:15954;Parent=Msa0124320-mRNA-1
chr1_3 exon 52030875 52030939 52030875 ID=Msa0124320-mRNA-1:exon:15953;Parent=Msa0124320-mRNA-1
chr1_3 exon 52033705 52033867 52033705 ID=Msa0124320-mRNA-1:exon:15952;Parent=Msa0124320-mRNA-1
chr1_3 CDS 52033705 52033867 52033705 ID=Msa0124320-mRNA-1:cds;Parent=Msa0124320-mRNA-1
chr1_3 CDS 52030875 52030939 52030875 ID=Msa0124320-mRNA-1:cds;Parent=Msa0124320-mRNA-1
chr1_3 CDS 52030512 52030707 52030512 ID=Msa0124320-mRNA-1:cds;Parent=Msa0124320-mRNA-1
chr1_3 CDS 52025556 52029766 52025556 ID=Msa0124320-mRNA-1:cds;Parent=Msa0124320-mRNA-1
chr1_3 CDS 52024301 52025371 52024301 ID=Msa0124320-mRNA-1:cds;Parent=Msa0124320-mRNA-1
chr1_3 three_prime_UTR 52024031 52024300 52024031 ID=Msa0124320-mRNA-1:three_prime_utr;Parent=Msa0124320-mRNA-1
Gene Sequence

>Msa0124320

ATGGGAGGGAATCGGCGACGACAACAAGATCCCGACCCTCTACTATGGTGGCGCGATGACGAGTCGGCACAGCGACAACAACACTATGACGATGATGGGTTGTTAACAATGACAGTGGCGTTGTGTTATAGCAACAACCTTATGAACTTAAGAATCTTTCCAGCATATCAGAATTTTGTTCATTCAGTTTTGGAATTTGAGAAAGAAAATCCAAGTTCAACCAATCAGTCAAAAGCATATTCTTGTGAAGGTTTTGCCTCTTCATGTCTTTCAAGGATTAATAAAGTACTTACAACAATAGAACAGAAAGCGGTGATGGCTACGGCGACTCGGCCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCCAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGACGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGTGCATTGGCCGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTGATGATTACAGACGATTTACCAATGGTTACTTCCATGGAGACAGAGCCACGTACTCCAGAAACACGCCACCCTTCACGTACATTTCTGGACTCAGATGAATCAGAAAAAGATGTTCATTTTATCAAAAGAAATGGAGCAGATAGTGAAGAACCTAATTCTGCTTTGAACAAGACAGGTTTAAGACAGCTCAATGATCTCCTCATCCCTCGAGAACATGCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGACAGTAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCATGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCGGAGGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAAGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTCTCAAAGAGTCGATGAACGAGCAAGCAAAGCAGAAGTTGAAGTTCGAGACTTGAAGGAAGCGGTAGTGAAATTACAGGCTGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACCAATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTTAACGAGCGTGCTACTAGAGCTGAAACTGAAGTTGAGTCCTTGAAGCAGGACCTTGTTCGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAGTGCTCGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAATGTTAGAAGGATCAATGAGCAAGCTAATTTAGCTGAAAATGAAATTGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTCCGATATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTCTTCTTTTGGAAACATCGAATCATGCTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAAAGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGAACTTAGAGCTCTTGCTGCTGACTTTCACAGTAAAGTGGAAATACTAGGGAATGTTGAATCACGTAAACAGTCTCTAGAGGATGAAGTGCACAGATTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCTATACAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAACTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATTGACGAGGTCAGGTCAGCTGATTTAGATCCACAATGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTATGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCCCAATTACAAGCCACAACTGAAAAGCTTGAGAAGCTCTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAGTACCGAACTTGATGTACTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTCACTTGACCATGAAAAGTCCAGTATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCAGCAAATTCTGAAAGATCTTGAAAAGCAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCGTCACTTAAAAAGGTAGAAGAGCTACTGGTTTCTCTATATTCCCAAAGGGAAGAGCATTGCAGAGTCTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATTGATATTCTGAAAGAAGATGCAAAGTGCCGGGAACAAGAATACGAGGAGGAACTGGATAGATCTCTAAATGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTCCTAGTTGAGTGCCAGAGACTTTTGGAGGCATCCAAAATGTCTGACAAAATTATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGGTTGGGCTGCATCAGGTGTTGAAGACTCTTGACATTCACGGCGAGAATTTCTTTGAAGATATGCTTGACGAAGACCGAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACACGATTTTCAAGGAAAGCCACCACTTGGCCATTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGAAACTGACTGTAGAAAATCTTGTGATAGAAAAACAAGAACTTGACGAGGAGTCCAGGATACAGTCTAAGCAGTTCACGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAAGAATCAGGAGTTGAAGTTGGCAATAAGCAAAGGAGAAGAGAGAATGGAAGCTATGACAACAGAAATAGTTAATCTACGCAAAGAGCTATCAAACTTTGAAAAGAGCCACAACAACTTACAGGAAAAAAGTTGCACGATACTTGAAGAGAAAAACTCCTTGATGGGAAGATTTGAAGATCTGAGTGAGGAGAAGGGTAACTTGGAAGAAGAACTTTGTGTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTGCGATTTACCAGAATATTATCTCTGAAAAACTCCAGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATAACCTGGAGGACAGATTGAAGATAATGGCACACAAATTAGAAAGTGAAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTGAAGTCAAATGTTGAATTGAATTTAGTTGAATCTATCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGACATGTTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACCGAGAAAACAGAATTGCAAAGAACGGCGGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCAAGCTAATCAAATTTTCCAATTGTCCTCAGACAAGGACCGTCAAAATGAAGAGCTTGGATGCCTAAGTGAAGTGAACCAGAAATTGGAGTCTGAAATGAAGTTCCTACACCAAGAACTTGAAGAAACTAAGCTAAGGGAAAAGAAGCTAAGTTATGAAGTACATGAAGGAATAAATGAGATTGAACAATGGGAAACCCAGGCTGCAGAACTCTTTGCTGAACTGCAGGTTTCTGCTGTCAATGAAACACTGCTTCAAGGGAAGGCCTTTGAGCTAGCTGATACATGTGAGCATCTTGAGAGCATAAACTACTCGAAAGACATGGAAAGAGAACAGCTGAAAGAATTAGTTAGCAAGTTGGAAGGTGAAAATGGGAAAATGTGTGATCAATTAGCTGCGTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTTACATCTCTGGAGATGCAGACTCTTGGAAATGCAAAACATCATGACTATGAAAAACCAGAGGTTAAAAATTTGGTGAATCACCAATACAATGAAAATGGTCAACAAGTAGATGAAGATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGGGGAGTTTAAGGCCAGATAATCCTGTAACTGAGATTGAAGTGCTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACTTCTGATAAGACACAGAAGATTGCGGCAGAACCGGCAGTAGATCGTCGTCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGACAACAAGAGTAGGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGTTTGAAGCTTCTCAGGAGACTGTAATGAAGTTGTTCGATGCCAACCGCAAGCTGGTGAAGAATGTAGAAGAGGGTGCACTGTCTTCAGCTGGGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTTCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCCGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGTGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGGCCACCCACTAAGGGTGATTGA
Protein sequence

>Msa0124320

MGGNRRRQQDPDPLLWWRDDESAQRQQHYDDDGLLTMTVALCYSNNLMNLRIFPAYQNFVHSVLEFEKENPSSTNQSKAYSCEGFASSCLSRINKVLTTIEQKAVMATATRPHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDVHFIKRNGADSEEPNSALNKTGLRQLNDLLIPREHAKFEGHARRGLNFLETQEDSSELNNGGRGTKAHVLSESERVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENSQRVDERASKAEVEVRDLKEAVVKLQAEREATLLQYQECLEKITNLEKNISFAQKDAGEFNERATRAETEVESLKQDLVRVEAEKEAALVQYKQCSETLSKLEERLKESEENVRRINEQANLAENEIEALKLEVTKLNEEKEDAALRYQQCLEIISSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHALQSELQSLAHKMGSQSEELNEKQKELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEELRALAADFHSKVEILGNVESRKQSLEDEVHRFNEENKILNELKISSSLSIQTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALMVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSENNNLLENSLFDVSTELDVLRGKSKILEDACQSLDHEKSSIFSEKEALVSELNTTQQILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKEDAKCREQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISKLETENIQKQDDVDSLSEKIKILRVGLHQVLKTLDIHGENFFEDMLDEDRTLLNHIHGKLKERKKSFDTIFKESHHLAIENSVLITFLEQLKLTVENLVIEKQELDEESRIQSKQFTALQIEFQKVLEKNQELKLAISKGEERMEAMTTEIVNLRKELSNFEKSHNNLQEKSCTILEEKNSLMGRFEDLSEEKGNLEEELCVLSHETFVQSNISAIYQNIISEKLQELKQLGQELDKLGSENNNLEDRLKIMAHKLESEEMENSHLKELFVKSNVELNLVESINDQLTCQIRNERDMLCQKEKVLSEAAKTFHALHTEKTELQRTAEDLKIRYDDAKGKLEEQANQIFQLSSDKDRQNEELGCLSEVNQKLESEMKFLHQELEETKLREKKLSYEVHEGINEIEQWETQAAELFAELQVSAVNETLLQGKAFELADTCEHLESINYSKDMEREQLKELVSKLEGENGKMCDQLAAYVPAISALNDCVTSLEMQTLGNAKHHDYEKPEVKNLVNHQYNENGQQVDEDQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMGSLRPDNPVTEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKIAAEPAVDRRQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEDNKSRVLERLDSDAQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQFEASQETVMKLFDANRKLVKNVEEGALSSAGRASSESDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGVTKTNNQKKKKTPFCACVRPPTKGD*