Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0125370 | Msa0882440 | 0.808119 | 3.621628e-50 | -8.615850e-47 |
| Msa0177700 | Msa0882440 | 0.807733 | 4.376761e-50 | -8.615850e-47 |
| Msa0178030 | Msa0882440 | 0.825243 | 5.213508e-54 | -8.615850e-47 |
| Msa0436280 | Msa0882440 | 0.813112 | 3.018698e-51 | -8.615850e-47 |
| Msa0882440 | Msa0947530 | 0.878595 | 2.473818e-69 | -8.615850e-47 |
| Msa0882440 | Msa1069660 | 0.818769 | 1.648778e-52 | -8.615850e-47 |
| Msa0882440 | Msa1208890 | 0.806405 | 8.358303e-50 | -8.615850e-47 |
| Msa0882440 | Msa1269580 | 0.819425 | 1.169129e-52 | -8.615850e-47 |
| Msa0882440 | Msa1400610 | 0.804598 | 2.000635e-49 | -8.615850e-47 |
| Msa0882440 | Msa1411400 | 0.835143 | 1.991539e-56 | -8.615850e-47 |
| Msa0882440 | Msa1429360 | 0.811743 | 6.010674e-51 | -8.615850e-47 |
| Msa0882440 | Msa1439890 | 0.821642 | 3.622346e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 89 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATATTGGAAATCTTATA+TGG | 0.259129 | 6_1:-31748183 | Msa0882440:three_prime_UTR |
| CTACCCGCCGCCGGGTTATC+CGG | 0.293634 | 6_1:-31751404 | Msa0882440:CDS |
| TATTTGTACAAGTACTATAT+TGG | 0.294863 | 6_1:-31748196 | Msa0882440:three_prime_UTR |
| TGCGGTGGCGGCGGCGGTGG+TGG | 0.308701 | 6_1:+31751373 | None:intergenic |
| AGGAAGTTGCTTCTGTCCTT+TGG | 0.313782 | 6_1:-31748384 | Msa0882440:three_prime_UTR |
| TGGTTTAACAGATGATGATA+TGG | 0.319388 | 6_1:-31748163 | Msa0882440:three_prime_UTR |
| GTAACTGTGGGACCTATTAT+TGG | 0.341017 | 6_1:+31751736 | None:intergenic |
| GGCGGTGGTCCCGGTGGTGG+TGG | 0.347849 | 6_1:+31751445 | None:intergenic |
| GTCATCTTCTCACCAATAAT+AGG | 0.360165 | 6_1:-31751748 | Msa0882440:five_prime_UTR |
| TGATGCGGTGGCGGCGGCGG+TGG | 0.384162 | 6_1:+31751370 | None:intergenic |
| GGTCCCGGTGGTGGTGGGTA+TGG | 0.385679 | 6_1:+31751451 | None:intergenic |
| TGAGGCGGAGCAGGAGGCGG+TGG | 0.402195 | 6_1:+31751265 | None:intergenic |
| GGCGGAGCAGGAGGCGGTGG+TGG | 0.403106 | 6_1:+31751268 | None:intergenic |
| CTTCTGTCCTTTGGAACACT+TGG | 0.407106 | 6_1:-31748375 | Msa0882440:three_prime_UTR |
| TGGTGATGCGGTGGCGGCGG+CGG | 0.408476 | 6_1:+31751367 | None:intergenic |
| CAGCACCATCATGGTGATCC+TGG | 0.420067 | 6_1:-31751214 | Msa0882440:CDS |
| ACGAAAGAAAGAGAGATCAT+AGG | 0.428271 | 6_1:+31751772 | None:intergenic |
| CCGGGGTGATGCGGTGGCTG+CGG | 0.432184 | 6_1:+31751334 | None:intergenic |
| GCGGTGGCGGCGGCGGTGGT+GGG | 0.433271 | 6_1:+31751374 | None:intergenic |
| CCACCGTATGATTCATATCA+AGG | 0.436074 | 6_1:-31751310 | Msa0882440:CDS |
| TGAGGCGGTGGTCCCGGTGG+TGG | 0.441469 | 6_1:+31751442 | None:intergenic |
| TTGTGGTACTGAGGCGGAGC+AGG | 0.446270 | 6_1:+31751256 | None:intergenic |
| TATTATAGTACTGTGAGATA+TGG | 0.446541 | 6_1:-31748315 | Msa0882440:three_prime_UTR |
| TGGTGGTGGTGATGCGGTGG+CGG | 0.452304 | 6_1:+31751361 | None:intergenic |
| TGGTGGTGATGCGGTGGCGG+CGG | 0.456657 | 6_1:+31751364 | None:intergenic |
| TACTGAGGCGGAGCAGGAGG+CGG | 0.464290 | 6_1:+31751262 | None:intergenic |
| GGTGGAGGATAATTACTCAT+TGG | 0.464871 | 6_1:+31751597 | None:intergenic |
| GCGGTGGTCCCGGTGGTGGT+GGG | 0.468822 | 6_1:+31751446 | None:intergenic |
| TGAAGCAACATTTCTACATC+GGG | 0.475323 | 6_1:+31748346 | None:intergenic |
| TGTTGATGAGGCGGTGGTCC+CGG | 0.476188 | 6_1:+31751436 | None:intergenic |
| GTTGTTCCTTCCTCCGTGGA+TGG | 0.478346 | 6_1:-31751189 | Msa0882440:intron |
| GGCGGTGGTGGGAAGCCTCC+CGG | 0.478520 | 6_1:+31751385 | None:intergenic |
| TACCCGCCGCCGGGTTATCC+GGG | 0.485088 | 6_1:-31751403 | Msa0882440:CDS |
| ATATGAATCATACGGTGGAC+CGG | 0.489356 | 6_1:+31751315 | None:intergenic |
| TATGAATCATACGGTGGACC+GGG | 0.494665 | 6_1:+31751316 | None:intergenic |
| CGTGGTTTCAAGAAATGAAA+GGG | 0.500139 | 6_1:+31751661 | None:intergenic |
| GTGGCTGCGGACCGTGGTGG+TGG | 0.500571 | 6_1:+31751347 | None:intergenic |
| CTCCTGCTACGTACAAATCC+TGG | 0.508185 | 6_1:-31748256 | Msa0882440:three_prime_UTR |
| GATGCGGTGGCTGCGGACCG+TGG | 0.509012 | 6_1:+31751341 | None:intergenic |
| TGTGAGATATGGTAAGTGTT+TGG | 0.528311 | 6_1:-31748304 | Msa0882440:three_prime_UTR |
| TACGGTGGACCGGGGTGATG+CGG | 0.533310 | 6_1:+31751325 | None:intergenic |
| CGGAGGAAGGAACAACAACC+AGG | 0.534624 | 6_1:+31751196 | None:intergenic |
| CCGTGGTGGTGGTGATGCGG+TGG | 0.537457 | 6_1:+31751358 | None:intergenic |
| ATCTCCATACCCACCACCAC+CGG | 0.541477 | 6_1:-31751455 | Msa0882440:CDS |
| GGTGGACCGGGGTGATGCGG+TGG | 0.541946 | 6_1:+31751328 | None:intergenic |
| GGGAAGCCTCCCGGATAACC+CGG | 0.548656 | 6_1:+31751394 | None:intergenic |
| CACATACCATCCACGGAGGA+AGG | 0.550018 | 6_1:+31751183 | None:intergenic |
| TGGTACTGAGGCGGAGCAGG+AGG | 0.552034 | 6_1:+31751259 | None:intergenic |
| ACGTGGTTTCAAGAAATGAA+AGG | 0.558009 | 6_1:+31751660 | None:intergenic |
| GTTGATCATCAGCACCATCA+TGG | 0.569251 | 6_1:-31751223 | Msa0882440:CDS |
| TTGAAGCAACATTTCTACAT+CGG | 0.572403 | 6_1:+31748345 | None:intergenic |
| GAAATTGAAGTACCTGGTGG+AGG | 0.572975 | 6_1:+31751582 | None:intergenic |
| CCTCCCGGATAACCCGGCGG+CGG | 0.573744 | 6_1:+31751400 | None:intergenic |
| TCTCCATACCCACCACCACC+GGG | 0.573788 | 6_1:-31751454 | Msa0882440:CDS |
| CACCGTATGATTCATATCAA+GGG | 0.577288 | 6_1:-31751309 | Msa0882440:CDS |
| TACCCTTGATATGAATCATA+CGG | 0.583534 | 6_1:+31751307 | None:intergenic |
| TCGTGATGTTGATGAGGCGG+TGG | 0.588874 | 6_1:+31751430 | None:intergenic |
| CAAGGTTGAAGAAGTGAATG+TGG | 0.596144 | 6_1:+31751711 | None:intergenic |
| AACAACCAGGATCACCATGA+TGG | 0.605913 | 6_1:+31751209 | None:intergenic |
| GGTTGTTGTTCCTTCCTCCG+TGG | 0.606362 | 6_1:-31751193 | Msa0882440:CDS |
| GATCAACATGCTGGTAGTTG+TGG | 0.608648 | 6_1:+31751239 | None:intergenic |
| TTGCTGCTGTTGTGTACTAG+AGG | 0.613174 | 6_1:-31748443 | Msa0882440:CDS |
| GACATAACCAAGTGTTCCAA+AGG | 0.620452 | 6_1:+31748368 | None:intergenic |
| ACATAACTTGTGTACAGACC+AGG | 0.631737 | 6_1:+31748238 | None:intergenic |
| GGACCGTGGTGGTGGTGATG+CGG | 0.633108 | 6_1:+31751355 | None:intergenic |
| TAGCCTTCGTGATGTTGATG+AGG | 0.638840 | 6_1:+31751424 | None:intergenic |
| CCGCAGCCACCGCATCACCC+CGG | 0.640771 | 6_1:-31751334 | Msa0882440:CDS |
| CCTTCGTGATGTTGATGAGG+CGG | 0.649399 | 6_1:+31751427 | None:intergenic |
| ATGAGTAATTATCCTCCACC+AGG | 0.650427 | 6_1:-31751594 | Msa0882440:intron |
| TACACAACAGCAGCAAAGCG+CGG | 0.654455 | 6_1:+31748450 | None:intergenic |
| TGTACACAAGTTATGTCATG+TGG | 0.656175 | 6_1:-31748231 | Msa0882440:three_prime_UTR |
| TGATGAGGCGGTGGTCCCGG+TGG | 0.660213 | 6_1:+31751439 | None:intergenic |
| GCGGTGGCTGCGGACCGTGG+TGG | 0.666817 | 6_1:+31751344 | None:intergenic |
| GGTGCTGATGATCAACATGC+TGG | 0.667336 | 6_1:+31751230 | None:intergenic |
| TCTTCTATGAAAAGTGAACG+TGG | 0.670299 | 6_1:+31751643 | None:intergenic |
| ATTGCAGAATGAATAACACA+AGG | 0.674346 | 6_1:+31751693 | None:intergenic |
| TTGGCACGGGTATCATGCTG+TGG | 0.674921 | 6_1:-31751825 | None:intergenic |
| CCGCCGCCGGGTTATCCGGG+AGG | 0.680818 | 6_1:-31751400 | Msa0882440:CDS |
| TGCTGGTAGTTGTGGTACTG+AGG | 0.681231 | 6_1:+31751247 | None:intergenic |
| ATGAATCATACGGTGGACCG+GGG | 0.683185 | 6_1:+31751317 | None:intergenic |
| CCTTGATATGAATCATACGG+TGG | 0.688053 | 6_1:+31751310 | None:intergenic |
| AGTGAATGTGGAAGTAACTG+TGG | 0.693025 | 6_1:+31751723 | None:intergenic |
| GCACGGGTATCATGCTGTGG+TGG | 0.693037 | 6_1:-31751822 | Msa0882440:five_prime_UTR |
| TGGTAGTTGTGGTACTGAGG+CGG | 0.704398 | 6_1:+31751250 | None:intergenic |
| CCACCGCATCACCACCACCA+CGG | 0.717904 | 6_1:-31751358 | Msa0882440:CDS |
| CCGCCTCATCAACATCACGA+AGG | 0.733794 | 6_1:-31751427 | Msa0882440:CDS |
| GTGAATGTGGAAGTAACTGT+GGG | 0.743616 | 6_1:+31751724 | None:intergenic |
| AAGCCTCCCGGATAACCCGG+CGG | 0.754419 | 6_1:+31751397 | None:intergenic |
| AAAACACATACCATCCACGG+AGG | 0.785912 | 6_1:+31751179 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTAAATTAATATTTG+TGG | - | chr6_1:31749882-31749901 | Msa0882440:intron | 10.0% |
| !!! | AATTGAATTGAATTTTGTTA+GGG | - | chr6_1:31748444-31748463 | Msa0882440:CDS | 15.0% |
| !! | AATCATTTATAGTAAAAACA+CGG | + | chr6_1:31749610-31749629 | None:intergenic | 15.0% |
| !! | TAAATTACTTGATCTATTAA+AGG | + | chr6_1:31749961-31749980 | None:intergenic | 15.0% |
| !!! | TCAATTTTAAAATGTAACTA+AGG | + | chr6_1:31750995-31751014 | None:intergenic | 15.0% |
| !!! | TTAGTTACATTTTAAAATTG+AGG | - | chr6_1:31750994-31751013 | Msa0882440:intron | 15.0% |
| !!! | CTGAAATAAAACAATTTTAA+AGG | + | chr6_1:31751333-31751352 | None:intergenic | 15.0% |
| !!! | GAATTGAATTGAATTTTGTT+AGG | - | chr6_1:31748443-31748462 | Msa0882440:CDS | 20.0% |
| !! | ACTTAAAAATGGTTATACTA+AGG | + | chr6_1:31749018-31749037 | None:intergenic | 20.0% |
| !!! | CAATCTCAATTTTAATCAAA+TGG | - | chr6_1:31749706-31749725 | Msa0882440:intron | 20.0% |
| !! | TAAGAAAAATACTAGATACA+AGG | - | chr6_1:31749931-31749950 | Msa0882440:intron | 20.0% |
| !! | AAGAAAAATACTAGATACAA+GGG | - | chr6_1:31749932-31749951 | Msa0882440:intron | 20.0% |
| !! | ATAGATCAAGTAATTTACTA+AGG | - | chr6_1:31749964-31749983 | Msa0882440:intron | 20.0% |
| !!! | TACATTTTTCGCTATAATAT+TGG | - | chr6_1:31750068-31750087 | Msa0882440:intron | 20.0% |
| !! | TCAATTGTTATATCATTATG+TGG | + | chr6_1:31750102-31750121 | None:intergenic | 20.0% |
| !! | AGGATTGATAAATTTAACTA+AGG | + | chr6_1:31750702-31750721 | None:intergenic | 20.0% |
| !! | TTAGTTAAATTTATCAATCC+TGG | - | chr6_1:31750701-31750720 | Msa0882440:intron | 20.0% |
| !!! | CTATTTTCTCAAATTATTAC+CGG | - | chr6_1:31750888-31750907 | Msa0882440:intron | 20.0% |
| !!! | AACTAAGGATTCAATTTTAA+AGG | + | chr6_1:31750980-31750999 | None:intergenic | 20.0% |
| !! | AGGATTGATAAATTTAACTA+AGG | + | chr6_1:31750702-31750721 | None:intergenic | 20.0% |
| !! | TTAGTTAAATTTATCAATCC+TGG | - | chr6_1:31750701-31750720 | Msa0882440:intron | 20.0% |
| !! | GCATTAACATTTCATATTAA+AGG | - | chr6_1:31751161-31751180 | Msa0882440:intron | 20.0% |
| !!! | CTATTTTCTCAAATTATTAC+CGG | - | chr6_1:31750888-31750907 | Msa0882440:intron | 20.0% |
| !! | TATTTGTACAAGTACTATAT+TGG | - | chr6_1:31751731-31751750 | Msa0882440:five_prime_UTR | 20.0% |
| !! | ACTATATTGGAAATCTTATA+TGG | - | chr6_1:31751744-31751763 | Msa0882440:five_prime_UTR | 20.0% |
| !! | AATTGAATTTTGTTAGGGTT+TGG | - | chr6_1:31748449-31748468 | Msa0882440:CDS | 25.0% |
| !!! | TATCAAGGGTATTTTGATAA+CGG | - | chr6_1:31748632-31748651 | Msa0882440:intron | 25.0% |
| !! | TTCAAAGTAACTGACTTAAT+GGG | + | chr6_1:31748860-31748879 | None:intergenic | 25.0% |
| !! | TTTCAAAGTAACTGACTTAA+TGG | + | chr6_1:31748861-31748880 | None:intergenic | 25.0% |
| ! | TTATTTGACTACCAGAAATT+TGG | - | chr6_1:31749094-31749113 | Msa0882440:intron | 25.0% |
| ! | TATTTGACTACCAGAAATTT+GGG | - | chr6_1:31749095-31749114 | Msa0882440:intron | 25.0% |
| ! | AATAAGATTATCCATTCTTC+TGG | - | chr6_1:31749764-31749783 | Msa0882440:intron | 25.0% |
| ! | TATAACAATTGAATAAGCAG+AGG | - | chr6_1:31750110-31750129 | Msa0882440:intron | 25.0% |
| ! | ATACTATATATGTAGCACAT+AGG | + | chr6_1:31750274-31750293 | None:intergenic | 25.0% |
| !!! | TGGATCAATACTTTTTCTTT+TGG | - | chr6_1:31750429-31750448 | Msa0882440:intron | 25.0% |
| !! | TTTTATTGTCCTCCTAATTT+TGG | - | chr6_1:31750453-31750472 | Msa0882440:intron | 25.0% |
| ! | CTAATAATCTCACCAAAATT+AGG | + | chr6_1:31750468-31750487 | None:intergenic | 25.0% |
| !!! | CTAATTTTGGTGAGATTATT+AGG | - | chr6_1:31750466-31750485 | Msa0882440:intron | 25.0% |
| ! | GCACTAACATTTCATATTAA+AGG | - | chr6_1:31750808-31750827 | Msa0882440:intron | 25.0% |
| ! | AATTAAAACCATAAACACGA+TGG | + | chr6_1:31751415-31751434 | None:intergenic | 25.0% |
| ! | TATTATAGTACTGTGAGATA+TGG | - | chr6_1:31751612-31751631 | Msa0882440:exon | 25.0% |
| ATTGCAGAATGAATAACACA+AGG | + | chr6_1:31748237-31748256 | None:intergenic | 30.0% | |
| TACCCTTGATATGAATCATA+CGG | + | chr6_1:31748623-31748642 | None:intergenic | 30.0% | |
| ! | TCAAAGTAACTGACTTAATG+GGG | + | chr6_1:31748859-31748878 | None:intergenic | 30.0% |
| ATTTAGCAAACAGTTCAGTT+TGG | - | chr6_1:31748924-31748943 | Msa0882440:intron | 30.0% | |
| ! | AAACTGAACCTAAAGGTTTT+AGG | + | chr6_1:31748993-31749012 | None:intergenic | 30.0% |
| CATGCATACTCACTTAAAAA+TGG | + | chr6_1:31749029-31749048 | None:intergenic | 30.0% | |
| TTAAGTGAGTATGCATGTAT+AGG | - | chr6_1:31749032-31749051 | Msa0882440:intron | 30.0% | |
| TAAGTGAGTATGCATGTATA+GGG | - | chr6_1:31749033-31749052 | Msa0882440:intron | 30.0% | |
| TCTTAAATTATTACTGCCAG+TGG | - | chr6_1:31749371-31749390 | Msa0882440:intron | 30.0% | |
| GACAGAGATAATCTTATGAA+GGG | + | chr6_1:31749814-31749833 | None:intergenic | 30.0% | |
| AGACAGAGATAATCTTATGA+AGG | + | chr6_1:31749815-31749834 | None:intergenic | 30.0% | |
| ! | TTTACTAAGGCAGTTTTTGA+TGG | - | chr6_1:31749977-31749996 | Msa0882440:intron | 30.0% |
| TATATCATTATGTGGTTCGA+AGG | + | chr6_1:31750094-31750113 | None:intergenic | 30.0% | |
| ! | ATTGTGTTTCTCCTTTTAAG+CGG | - | chr6_1:31750231-31750250 | Msa0882440:intron | 30.0% |
| ATATATGTAGCACATAGGTT+GGG | + | chr6_1:31750269-31750288 | None:intergenic | 30.0% | |
| TATATATGTAGCACATAGGT+TGG | + | chr6_1:31750270-31750289 | None:intergenic | 30.0% | |
| ATAATCTCACCAAAATTAGG+AGG | + | chr6_1:31750465-31750484 | None:intergenic | 30.0% | |
| AATTACCATGTAACCAAGTT+GGG | + | chr6_1:31750728-31750747 | None:intergenic | 30.0% | |
| TTAATGATGTGTCATCTATG+AGG | + | chr6_1:31750946-31750965 | None:intergenic | 30.0% | |
| AGATGACACATCATTAAACT+AGG | - | chr6_1:31750949-31750968 | Msa0882440:intron | 30.0% | |
| TTAATGATGTGTCATCTATG+AGG | + | chr6_1:31750946-31750965 | None:intergenic | 30.0% | |
| AGATGACACATCATTAAACT+AGG | - | chr6_1:31750949-31750968 | Msa0882440:intron | 30.0% | |
| TTGAAGCAACATTTCTACAT+CGG | + | chr6_1:31751585-31751604 | None:intergenic | 30.0% | |
| TGGTTTAACAGATGATGATA+TGG | - | chr6_1:31751764-31751783 | Msa0882440:five_prime_UTR | 30.0% | |
| ACGAAAGAAAGAGAGATCAT+AGG | + | chr6_1:31748158-31748177 | None:intergenic | 35.0% | |
| GTCATCTTCTCACCAATAAT+AGG | - | chr6_1:31748179-31748198 | Msa0882440:three_prime_UTR | 35.0% | |
| CGTGGTTTCAAGAAATGAAA+GGG | + | chr6_1:31748269-31748288 | None:intergenic | 35.0% | |
| ACGTGGTTTCAAGAAATGAA+AGG | + | chr6_1:31748270-31748289 | None:intergenic | 35.0% | |
| TCTTCTATGAAAAGTGAACG+TGG | + | chr6_1:31748287-31748306 | None:intergenic | 35.0% | |
| ! | GATAGAGAAATTGAAGTACC+TGG | + | chr6_1:31748354-31748373 | None:intergenic | 35.0% |
| CACCGTATGATTCATATCAA+GGG | - | chr6_1:31748618-31748637 | Msa0882440:intron | 35.0% | |
| AGAAAAACACATACCATCCA+CGG | + | chr6_1:31748754-31748773 | None:intergenic | 35.0% | |
| !!! | AACCTAAAGGTTTTAGGTAG+GGG | + | chr6_1:31748987-31749006 | None:intergenic | 35.0% |
| !!! | GAACCTAAAGGTTTTAGGTA+GGG | + | chr6_1:31748988-31749007 | None:intergenic | 35.0% |
| !!! | TGAACCTAAAGGTTTTAGGT+AGG | + | chr6_1:31748989-31749008 | None:intergenic | 35.0% |
| TAAGGCTAAACTGAACCTAA+AGG | + | chr6_1:31749000-31749019 | None:intergenic | 35.0% | |
| AAGTGTGGCTGCAAATATAA+AGG | - | chr6_1:31749147-31749166 | Msa0882440:intron | 35.0% | |
| TAAATTATTACTGCCAGTGG+CGG | - | chr6_1:31749374-31749393 | Msa0882440:intron | 35.0% | |
| TCATACTTCATAGCTTAACC+AGG | - | chr6_1:31749445-31749464 | Msa0882440:intron | 35.0% | |
| !!! | ATGGTTTTAATTAGCAGTCC+TGG | + | chr6_1:31749466-31749485 | None:intergenic | 35.0% |
| AGGACTGCTAATTAAAACCA+TGG | - | chr6_1:31749465-31749484 | Msa0882440:intron | 35.0% | |
| GGACTGCTAATTAAAACCAT+GGG | - | chr6_1:31749466-31749485 | Msa0882440:intron | 35.0% | |
| TATCCATTCTTCTGGTAGAA+TGG | - | chr6_1:31749772-31749791 | Msa0882440:intron | 35.0% | |
| TATCTCTGTCTCTGATAGAA+TGG | - | chr6_1:31749824-31749843 | Msa0882440:intron | 35.0% | |
| AATGTACGAGTTCTGTGTAT+TGG | - | chr6_1:31750024-31750043 | Msa0882440:intron | 35.0% | |
| ATGTACGAGTTCTGTGTATT+GGG | - | chr6_1:31750025-31750044 | Msa0882440:intron | 35.0% | |
| ! | TTGTGTTTCTCCTTTTAAGC+GGG | - | chr6_1:31750232-31750251 | Msa0882440:intron | 35.0% |
| ACTAGTACCAAACTAAGAAG+CGG | - | chr6_1:31750295-31750314 | Msa0882440:intron | 35.0% | |
| ATGTTTACCGCTTCTTAGTT+TGG | + | chr6_1:31750305-31750324 | None:intergenic | 35.0% | |
| TCCAATTCATGTCTTATCTC+AGG | + | chr6_1:31750350-31750369 | None:intergenic | 35.0% | |
| CTGTCGTATGCAATATTTGA+TGG | - | chr6_1:31750409-31750428 | Msa0882440:intron | 35.0% | |
| TTTGGTGAGATTATTAGGCA+AGG | - | chr6_1:31750471-31750490 | Msa0882440:intron | 35.0% | |
| TGCACAACTAAGTTATGTGT+TGG | - | chr6_1:31750494-31750513 | Msa0882440:intron | 35.0% | |
| ! | GAATCAACTACTGGTTGATT+AGG | + | chr6_1:31750521-31750540 | None:intergenic | 35.0% |
| ATTGTTAATGTGTTCGCCTT+GGG | + | chr6_1:31750674-31750693 | None:intergenic | 35.0% | |
| AATTGTTAATGTGTTCGCCT+TGG | + | chr6_1:31750675-31750694 | None:intergenic | 35.0% | |
| CAATTACCATGTAACCAAGT+TGG | + | chr6_1:31750729-31750748 | None:intergenic | 35.0% | |
| CAACTTGGTTACATGGTAAT+TGG | - | chr6_1:31750727-31750746 | Msa0882440:intron | 35.0% | |
| TTCGCATATTATGAAGAGCA+GGG | + | chr6_1:31750762-31750781 | None:intergenic | 35.0% | |
| TTTCGCATATTATGAAGAGC+AGG | + | chr6_1:31750763-31750782 | None:intergenic | 35.0% | |
| GCTGAAAATGTAACCAAGTT+GGG | + | chr6_1:31751067-31751086 | None:intergenic | 35.0% | |
| AGCTGAAAATGTAACCAAGT+TGG | + | chr6_1:31751068-31751087 | None:intergenic | 35.0% | |
| ! | ACTTGGTTACATTTTCAGCT+TGG | - | chr6_1:31751068-31751087 | Msa0882440:intron | 35.0% |
| ! | GTTACATTTTCAGCTTGGAT+TGG | - | chr6_1:31751073-31751092 | Msa0882440:intron | 35.0% |
| !! | TTTCAGCTTGGATTGGTAAT+TGG | - | chr6_1:31751080-31751099 | Msa0882440:intron | 35.0% |
| TTCGCATATTATGAAGAGCA+GGG | + | chr6_1:31750762-31750781 | None:intergenic | 35.0% | |
| TTTCGCATATTATGAAGAGC+AGG | + | chr6_1:31750763-31750782 | None:intergenic | 35.0% | |
| ! | TTTCATATTAAAGGCGCATC+CGG | - | chr6_1:31751170-31751189 | Msa0882440:intron | 35.0% |
| TTAAAAGCAACCACATGTGT+CGG | + | chr6_1:31751216-31751235 | None:intergenic | 35.0% | |
| !!! | CAGAAGCAACTTCCTTTTTT+CGG | + | chr6_1:31751538-31751557 | None:intergenic | 35.0% |
| TGAAGCAACATTTCTACATC+GGG | + | chr6_1:31751584-31751603 | None:intergenic | 35.0% | |
| TGTGAGATATGGTAAGTGTT+TGG | - | chr6_1:31751623-31751642 | Msa0882440:five_prime_UTR | 35.0% | |
| TGTACACAAGTTATGTCATG+TGG | - | chr6_1:31751696-31751715 | Msa0882440:five_prime_UTR | 35.0% | |
| GTAACTGTGGGACCTATTAT+TGG | + | chr6_1:31748194-31748213 | None:intergenic | 40.0% | |
| GTGAATGTGGAAGTAACTGT+GGG | + | chr6_1:31748206-31748225 | None:intergenic | 40.0% | |
| AGTGAATGTGGAAGTAACTG+TGG | + | chr6_1:31748207-31748226 | None:intergenic | 40.0% | |
| CAAGGTTGAAGAAGTGAATG+TGG | + | chr6_1:31748219-31748238 | None:intergenic | 40.0% | |
| GGTGGAGGATAATTACTCAT+TGG | + | chr6_1:31748333-31748352 | None:intergenic | 40.0% | |
| ATGAGTAATTATCCTCCACC+AGG | - | chr6_1:31748333-31748352 | Msa0882440:three_prime_UTR | 40.0% | |
| ! | AGAGAAATTGAAGTACCTGG+TGG | + | chr6_1:31748351-31748370 | None:intergenic | 40.0% |
| ATATGAATCATACGGTGGAC+CGG | + | chr6_1:31748615-31748634 | None:intergenic | 40.0% | |
| CCTTGATATGAATCATACGG+TGG | + | chr6_1:31748620-31748639 | None:intergenic | 40.0% | |
| CCACCGTATGATTCATATCA+AGG | - | chr6_1:31748617-31748636 | Msa0882440:intron | 40.0% | |
| GTTGTGTCTAGTGTCTACTT+TGG | + | chr6_1:31748815-31748834 | None:intergenic | 40.0% | |
| GCAAACAGTTCAGTTTGGTT+CGG | - | chr6_1:31748929-31748948 | Msa0882440:intron | 40.0% | |
| !!! | TAAAGGTTTTAGGTAGGGGT+GGG | + | chr6_1:31748983-31749002 | None:intergenic | 40.0% |
| TATGGTGACACCCAAATTTC+TGG | + | chr6_1:31749108-31749127 | None:intergenic | 40.0% | |
| CAGTTGCAAACTGCGATTTA+TGG | + | chr6_1:31749126-31749145 | None:intergenic | 40.0% | |
| !!! | GGTTTTAGAGATCTCTGCAA+CGG | - | chr6_1:31749168-31749187 | Msa0882440:intron | 40.0% |
| !!! | GTTTTAGAGATCTCTGCAAC+GGG | - | chr6_1:31749169-31749188 | Msa0882440:intron | 40.0% |
| TATGTGACCTCCAAGTTACA+TGG | - | chr6_1:31749550-31749569 | Msa0882440:intron | 40.0% | |
| AACAACCGAATTGTTGTGTC+AGG | - | chr6_1:31749574-31749593 | Msa0882440:intron | 40.0% | |
| GAGTTTGTATGAGTGAGCAT+TGG | + | chr6_1:31749743-31749762 | None:intergenic | 40.0% | |
| TGTCCATTCTACCAGAAGAA+TGG | + | chr6_1:31749778-31749797 | None:intergenic | 40.0% | |
| AAATTATACGTGCGTGTGAG+AGG | - | chr6_1:31749847-31749866 | Msa0882440:intron | 40.0% | |
| AATTATACGTGCGTGTGAGA+GGG | - | chr6_1:31749848-31749867 | Msa0882440:intron | 40.0% | |
| CTACAGTTTACCCGCTTAAA+AGG | + | chr6_1:31750245-31750264 | None:intergenic | 40.0% | |
| TTCATGTCTTATCTCAGGCA+CGG | + | chr6_1:31750345-31750364 | None:intergenic | 40.0% | |
| GCCTGAGATAAGACATGAAT+TGG | - | chr6_1:31750346-31750365 | Msa0882440:intron | 40.0% | |
| !! | GTGAGTGTTGAATCAACTAC+TGG | + | chr6_1:31750530-31750549 | None:intergenic | 40.0% |
| TCGCATATTATGAAGAGCAG+GGG | + | chr6_1:31750761-31750780 | None:intergenic | 40.0% | |
| GCTGCATAGTGTGTCATAAA+GGG | + | chr6_1:31750790-31750809 | None:intergenic | 40.0% | |
| TGCTGCATAGTGTGTCATAA+AGG | + | chr6_1:31750791-31750810 | None:intergenic | 40.0% | |
| ! | TTTCATATTAAAGGCGCGTC+CGG | - | chr6_1:31750817-31750836 | Msa0882440:intron | 40.0% |
| TTAAAAGCAACCACATGCGT+CGG | + | chr6_1:31750863-31750882 | None:intergenic | 40.0% | |
| TCGCATATTATGAAGAGCAG+GGG | + | chr6_1:31750761-31750780 | None:intergenic | 40.0% | |
| GCTGCATAGTGTGTCATAAA+GGG | + | chr6_1:31750790-31750809 | None:intergenic | 40.0% | |
| TGCTGCATAGTGTGTCATAA+AGG | + | chr6_1:31750791-31750810 | None:intergenic | 40.0% | |
| CTGATAAGCATGCCGAAAAA+AGG | - | chr6_1:31751523-31751542 | Msa0882440:intron | 40.0% | |
| GACATAACCAAGTGTTCCAA+AGG | + | chr6_1:31751562-31751581 | None:intergenic | 40.0% | |
| ! | ACATAACTTGTGTACAGACC+AGG | + | chr6_1:31751692-31751711 | None:intergenic | 40.0% |
| ! | GAAATTGAAGTACCTGGTGG+AGG | + | chr6_1:31748348-31748367 | None:intergenic | 45.0% |
| TAGCCTTCGTGATGTTGATG+AGG | + | chr6_1:31748506-31748525 | None:intergenic | 45.0% | |
| TATGAATCATACGGTGGACC+GGG | + | chr6_1:31748614-31748633 | None:intergenic | 45.0% | |
| GATCAACATGCTGGTAGTTG+TGG | + | chr6_1:31748691-31748710 | None:intergenic | 45.0% | |
| GTTGATCATCAGCACCATCA+TGG | - | chr6_1:31748704-31748723 | Msa0882440:intron | 45.0% | |
| AACAACCAGGATCACCATGA+TGG | + | chr6_1:31748721-31748740 | None:intergenic | 45.0% | |
| AAAACACATACCATCCACGG+AGG | + | chr6_1:31748751-31748770 | None:intergenic | 45.0% | |
| !!! | CTAAAGGTTTTAGGTAGGGG+TGG | + | chr6_1:31748984-31749003 | None:intergenic | 45.0% |
| CACCCCTACCTAAAACCTTT+AGG | - | chr6_1:31748982-31749001 | Msa0882440:intron | 45.0% | |
| GTTAGTGTTTGACACCGACA+CGG | - | chr6_1:31749312-31749331 | Msa0882440:intron | 45.0% | |
| ACAAACAACGTCTCTGCTTG+CGG | + | chr6_1:31749516-31749535 | None:intergenic | 45.0% | |
| GTTGTTGCCATGTAACTTGG+AGG | + | chr6_1:31749560-31749579 | None:intergenic | 45.0% | |
| TCGGTTGTTGCCATGTAACT+TGG | + | chr6_1:31749563-31749582 | None:intergenic | 45.0% | |
| GCAGAGGATACAATTCAGTC+TGG | - | chr6_1:31750126-31750145 | Msa0882440:intron | 45.0% | |
| TTCTACAATAACCAGCGAGC+AGG | - | chr6_1:31750185-31750204 | Msa0882440:intron | 45.0% | |
| TATCAATCCTGGACCCAACT+TGG | - | chr6_1:31750712-31750731 | Msa0882440:intron | 45.0% | |
| TATCAATCCTGGACCCAACT+TGG | - | chr6_1:31750712-31750731 | Msa0882440:intron | 45.0% | |
| ! | AATGTAACCAAGTTGGGTCC+AGG | + | chr6_1:31751061-31751080 | None:intergenic | 45.0% |
| GCTTCTCTCCATCGTGTTTA+TGG | - | chr6_1:31751404-31751423 | Msa0882440:CDS | 45.0% | |
| CCAAGCTGCAGTGTAAATGA+AGG | + | chr6_1:31751457-31751476 | None:intergenic | 45.0% | |
| CCTTCATTTACACTGCAGCT+TGG | - | chr6_1:31751454-31751473 | Msa0882440:CDS | 45.0% | |
| TTGCTGCTGTTGTGTACTAG+AGG | - | chr6_1:31751484-31751503 | Msa0882440:intron | 45.0% | |
| AGGAAGTTGCTTCTGTCCTT+TGG | - | chr6_1:31751543-31751562 | Msa0882440:intron | 45.0% | |
| !! | CTTCTGTCCTTTGGAACACT+TGG | - | chr6_1:31751552-31751571 | Msa0882440:intron | 45.0% |
| ! | CCTTCGTGATGTTGATGAGG+CGG | + | chr6_1:31748503-31748522 | None:intergenic | 50.0% |
| ATGAATCATACGGTGGACCG+GGG | + | chr6_1:31748613-31748632 | None:intergenic | 50.0% | |
| ! | TGGTAGTTGTGGTACTGAGG+CGG | + | chr6_1:31748680-31748699 | None:intergenic | 50.0% |
| TGCTGGTAGTTGTGGTACTG+AGG | + | chr6_1:31748683-31748702 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGATCAACATGC+TGG | + | chr6_1:31748700-31748719 | None:intergenic | 50.0% |
| GCAGTTTGCAACTGCAAGTG+TGG | - | chr6_1:31749132-31749151 | Msa0882440:intron | 50.0% | |
| !! | CAGAAGTGTCGGTGCTACAT+AGG | + | chr6_1:31749263-31749282 | None:intergenic | 50.0% |
| ! | ACGCCTTCGATCAGAAGTGT+CGG | + | chr6_1:31749274-31749293 | None:intergenic | 50.0% |
| !! | CACATGTGTCACTTCCGTGT+CGG | + | chr6_1:31749329-31749348 | None:intergenic | 50.0% |
| TTCGTGTCTCGTGTCTGAGT+CGG | - | chr6_1:31749411-31749430 | Msa0882440:intron | 50.0% | |
| CTGTGCACATTCATTGCCCA+TGG | + | chr6_1:31749485-31749504 | None:intergenic | 50.0% | |
| CAAACAACGTCTCTGCTTGC+GGG | + | chr6_1:31749515-31749534 | None:intergenic | 50.0% | |
| GCGAGCCTGACACAACAATT+CGG | + | chr6_1:31749582-31749601 | None:intergenic | 50.0% | |
| ACTAATTGTTGCCTGCTCGC+TGG | + | chr6_1:31750199-31750218 | None:intergenic | 50.0% | |
| GCGAGCAGGCAACAATTAGT+TGG | - | chr6_1:31750199-31750218 | Msa0882440:intron | 50.0% | |
| TAATGTGTTCGCCTTGGGAC+TGG | + | chr6_1:31750669-31750688 | None:intergenic | 50.0% | |
| ! | CATGTAACCAAGTTGGGTCC+AGG | + | chr6_1:31750722-31750741 | None:intergenic | 50.0% |
| CTGGACCCAACTTGGTTACA+TGG | - | chr6_1:31750720-31750739 | Msa0882440:intron | 50.0% | |
| TACACAACAGCAGCAAAGCG+CGG | + | chr6_1:31751480-31751499 | None:intergenic | 50.0% | |
| CTCCTGCTACGTACAAATCC+TGG | - | chr6_1:31751671-31751690 | Msa0882440:five_prime_UTR | 50.0% | |
| GACCAGGATTTGTACGTAGC+AGG | + | chr6_1:31751676-31751695 | None:intergenic | 50.0% | |
| ATCTCCATACCCACCACCAC+CGG | - | chr6_1:31748472-31748491 | Msa0882440:intron | 55.0% | |
| ! | TCGTGATGTTGATGAGGCGG+TGG | + | chr6_1:31748500-31748519 | None:intergenic | 55.0% |
| CCGCCTCATCAACATCACGA+AGG | - | chr6_1:31748500-31748519 | Msa0882440:intron | 55.0% | |
| CAGCACCATCATGGTGATCC+TGG | - | chr6_1:31748713-31748732 | Msa0882440:intron | 55.0% | |
| CGGAGGAAGGAACAACAACC+AGG | + | chr6_1:31748734-31748753 | None:intergenic | 55.0% | |
| ! | GGTTGTTGTTCCTTCCTCCG+TGG | - | chr6_1:31748734-31748753 | Msa0882440:intron | 55.0% |
| GTTGTTCCTTCCTCCGTGGA+TGG | - | chr6_1:31748738-31748757 | Msa0882440:intron | 55.0% | |
| CACATACCATCCACGGAGGA+AGG | + | chr6_1:31748747-31748766 | None:intergenic | 55.0% | |
| !! | GTTTTAGGTAGGGGTGGGCA+TGG | + | chr6_1:31748978-31748997 | None:intergenic | 55.0% |
| ! | GCACCGACACTTCTGATCGA+AGG | - | chr6_1:31749268-31749287 | Msa0882440:intron | 55.0% |
| GCTCACTACATCCAGTCCCA+AGG | - | chr6_1:31750655-31750674 | Msa0882440:intron | 55.0% | |
| !! | GTCGTGTTGGTGTTGGACAC+CGG | + | chr6_1:31750839-31750858 | None:intergenic | 55.0% |
| ACGGACACTGGACATGACAC+CGG | + | chr6_1:31750910-31750929 | None:intergenic | 55.0% | |
| TCCAGTGTCCGTGTTTGCGT+CGG | - | chr6_1:31750918-31750937 | Msa0882440:intron | 55.0% | |
| !! | ATGAGGCACCGACGCAAACA+CGG | + | chr6_1:31750929-31750948 | None:intergenic | 55.0% |
| !! | GTCGTGTTGGTGTTGGACAC+CGG | + | chr6_1:31750839-31750858 | None:intergenic | 55.0% |
| !! | TGTCGGTGTCGTGTTGGTGT+TGG | + | chr6_1:31751199-31751218 | None:intergenic | 55.0% |
| !! | CACATGTGTCGGTGTCGTGT+TGG | + | chr6_1:31751205-31751224 | None:intergenic | 55.0% |
| CAACACGACACCGACACATG+TGG | - | chr6_1:31751203-31751222 | Msa0882440:CDS | 55.0% | |
| ACGGACACTGGACATGACAC+CGG | + | chr6_1:31750910-31750929 | None:intergenic | 55.0% | |
| TCCAGTGTCCGTGTTTGCGT+CGG | - | chr6_1:31750918-31750937 | Msa0882440:intron | 55.0% | |
| !! | ATGAGGCACCGACGCAAACA+CGG | + | chr6_1:31750929-31750948 | None:intergenic | 55.0% |
| TCTCCATACCCACCACCACC+GGG | - | chr6_1:31748473-31748492 | Msa0882440:intron | 60.0% | |
| ! | TGTTGATGAGGCGGTGGTCC+CGG | + | chr6_1:31748494-31748513 | None:intergenic | 60.0% |
| ! | TTGTGGTACTGAGGCGGAGC+AGG | + | chr6_1:31748674-31748693 | None:intergenic | 60.0% |
| GGGTGGGCATGGTTCAGTTC+GGG | + | chr6_1:31748967-31748986 | None:intergenic | 60.0% | |
| GGGGTGGGCATGGTTCAGTT+CGG | + | chr6_1:31748968-31748987 | None:intergenic | 60.0% | |
| ACCAGATACGACACCGCCAC+TGG | + | chr6_1:31749390-31749409 | None:intergenic | 60.0% | |
| CGTCTCTGCTTGCGGGAGTA+AGG | + | chr6_1:31749508-31749527 | None:intergenic | 60.0% | |
| !! | CGTCGGTGTCGTGTTGGTGT+TGG | + | chr6_1:31750846-31750865 | None:intergenic | 60.0% |
| !! | CACATGCGTCGGTGTCGTGT+TGG | + | chr6_1:31750852-31750871 | None:intergenic | 60.0% |
| CAACACGACACCGACGCATG+TGG | - | chr6_1:31750850-31750869 | Msa0882440:intron | 60.0% | |
| ACCGACGCAAACACGGACAC+TGG | + | chr6_1:31750922-31750941 | None:intergenic | 60.0% | |
| ACCGACGCAAACACGGACAC+TGG | + | chr6_1:31750922-31750941 | None:intergenic | 60.0% | |
| AAGCCTCCCGGATAACCCGG+CGG | + | chr6_1:31748533-31748552 | None:intergenic | 65.0% | |
| GGGAAGCCTCCCGGATAACC+CGG | + | chr6_1:31748536-31748555 | None:intergenic | 65.0% | |
| !! | TGGTGGTGGTGATGCGGTGG+CGG | + | chr6_1:31748569-31748588 | None:intergenic | 65.0% |
| CCACCGCATCACCACCACCA+CGG | - | chr6_1:31748569-31748588 | Msa0882440:intron | 65.0% | |
| !! | GGACCGTGGTGGTGGTGATG+CGG | + | chr6_1:31748575-31748594 | None:intergenic | 65.0% |
| TACGGTGGACCGGGGTGATG+CGG | + | chr6_1:31748605-31748624 | None:intergenic | 65.0% | |
| TACTGAGGCGGAGCAGGAGG+CGG | + | chr6_1:31748668-31748687 | None:intergenic | 65.0% | |
| ! | TGGTACTGAGGCGGAGCAGG+AGG | + | chr6_1:31748671-31748690 | None:intergenic | 65.0% |
| !! | GCCAGTGGCGGTGTCGTATC+TGG | - | chr6_1:31749386-31749405 | Msa0882440:intron | 65.0% |
| !! | GGTCCCGGTGGTGGTGGGTA+TGG | + | chr6_1:31748479-31748498 | None:intergenic | 70.0% |
| TGATGAGGCGGTGGTCCCGG+TGG | + | chr6_1:31748491-31748510 | None:intergenic | 70.0% | |
| TCACGAAGGCTACCCGCCGC+CGG | - | chr6_1:31748514-31748533 | Msa0882440:intron | 70.0% | |
| CTACCCGCCGCCGGGTTATC+CGG | - | chr6_1:31748523-31748542 | Msa0882440:intron | 70.0% | |
| TACCCGCCGCCGGGTTATCC+GGG | - | chr6_1:31748524-31748543 | Msa0882440:intron | 70.0% | |
| ! | TGGTGGTGATGCGGTGGCGG+CGG | + | chr6_1:31748566-31748585 | None:intergenic | 70.0% |
| !! | CCGTGGTGGTGGTGATGCGG+TGG | + | chr6_1:31748572-31748591 | None:intergenic | 70.0% |
| ! | GCGGTGGTCCCGGTGGTGGT+GGG | + | chr6_1:31748484-31748503 | None:intergenic | 75.0% |
| TGAGGCGGTGGTCCCGGTGG+TGG | + | chr6_1:31748488-31748507 | None:intergenic | 75.0% | |
| CACGAAGGCTACCCGCCGCC+GGG | - | chr6_1:31748515-31748534 | Msa0882440:intron | 75.0% | |
| CTCCCGGATAACCCGGCGGC+GGG | + | chr6_1:31748529-31748548 | None:intergenic | 75.0% | |
| CCTCCCGGATAACCCGGCGG+CGG | + | chr6_1:31748530-31748549 | None:intergenic | 75.0% | |
| !! | GGCGGTGGTGGGAAGCCTCC+CGG | + | chr6_1:31748545-31748564 | None:intergenic | 75.0% |
| ! | TGGTGATGCGGTGGCGGCGG+CGG | + | chr6_1:31748563-31748582 | None:intergenic | 75.0% |
| GTGGCTGCGGACCGTGGTGG+TGG | + | chr6_1:31748583-31748602 | None:intergenic | 75.0% | |
| GATGCGGTGGCTGCGGACCG+TGG | + | chr6_1:31748589-31748608 | None:intergenic | 75.0% | |
| CCGGGGTGATGCGGTGGCTG+CGG | + | chr6_1:31748596-31748615 | None:intergenic | 75.0% | |
| CCGCAGCCACCGCATCACCC+CGG | - | chr6_1:31748593-31748612 | Msa0882440:intron | 75.0% | |
| GGTGGACCGGGGTGATGCGG+TGG | + | chr6_1:31748602-31748621 | None:intergenic | 75.0% | |
| TGAGGCGGAGCAGGAGGCGG+TGG | + | chr6_1:31748665-31748684 | None:intergenic | 75.0% | |
| !! | GGCGGTGGTCCCGGTGGTGG+TGG | + | chr6_1:31748485-31748504 | None:intergenic | 80.0% |
| ! | CCGCCGCCGGGTTATCCGGG+AGG | - | chr6_1:31748527-31748546 | Msa0882440:intron | 80.0% |
| !! | TGATGCGGTGGCGGCGGCGG+TGG | + | chr6_1:31748560-31748579 | None:intergenic | 80.0% |
| ! | GCGGTGGCTGCGGACCGTGG+TGG | + | chr6_1:31748586-31748605 | None:intergenic | 80.0% |
| ! | GGCGGAGCAGGAGGCGGTGG+TGG | + | chr6_1:31748662-31748681 | None:intergenic | 80.0% |
| !! | GCGGTGGCGGCGGCGGTGGT+GGG | + | chr6_1:31748556-31748575 | None:intergenic | 85.0% |
| !! | TGCGGTGGCGGCGGCGGTGG+TGG | + | chr6_1:31748557-31748576 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 31748106 | 31751843 | 31748106 | ID=Msa0882440;Name=Msa0882440 |
| chr6_1 | mRNA | 31748106 | 31751843 | 31748106 | ID=Msa0882440-mRNA-1;Parent=Msa0882440;Name=Msa0882440-mRNA-1;_AED=0.24;_eAED=0.24;_QI=227|1|1|1|0.5|0.66|3|317|123 |
| chr6_1 | exon | 31748106 | 31748477 | 31748106 | ID=Msa0882440-mRNA-1:exon:7856;Parent=Msa0882440-mRNA-1 |
| chr6_1 | exon | 31751190 | 31751484 | 31751190 | ID=Msa0882440-mRNA-1:exon:7855;Parent=Msa0882440-mRNA-1 |
| chr6_1 | exon | 31751595 | 31751843 | 31751595 | ID=Msa0882440-mRNA-1:exon:7854;Parent=Msa0882440-mRNA-1 |
| chr6_1 | five_prime_UTR | 31751617 | 31751843 | 31751617 | ID=Msa0882440-mRNA-1:five_prime_utr;Parent=Msa0882440-mRNA-1 |
| chr6_1 | CDS | 31751595 | 31751616 | 31751595 | ID=Msa0882440-mRNA-1:cds;Parent=Msa0882440-mRNA-1 |
| chr6_1 | CDS | 31751190 | 31751484 | 31751190 | ID=Msa0882440-mRNA-1:cds;Parent=Msa0882440-mRNA-1 |
| chr6_1 | CDS | 31748423 | 31748477 | 31748423 | ID=Msa0882440-mRNA-1:cds;Parent=Msa0882440-mRNA-1 |
| chr6_1 | three_prime_UTR | 31748106 | 31748422 | 31748106 | ID=Msa0882440-mRNA-1:three_prime_utr;Parent=Msa0882440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
