Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411400 | sp|Q9M9G6|CTF64_ARATH | 36.342 | 421 | 187 | 14 | 2 | 418 | 114 | 457 | 2.13e-46 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411400 | A0A072VPL6 | 92.081 | 442 | 13 | 3 | 2 | 421 | 131 | 572 | 0.0 | 785 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1400610 | Msa1411400 | 0.811488 | 6.827109e-51 | -8.615850e-47 |
| Msa1411400 | Msa1429360 | 0.809199 | 2.129660e-50 | -8.615850e-47 |
| Msa1411400 | Msa1439890 | 0.995806 | 4.270113e-220 | -8.615850e-47 |
| Msa1411400 | Msa1442220 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
| Msa1411400 | Msa1449910 | -0.802776 | 4.778747e-49 | -8.615850e-47 |
| Msa0125370 | Msa1411400 | 0.857140 | 1.999355e-62 | -8.615850e-47 |
| Msa0177700 | Msa1411400 | 0.818021 | 2.435818e-52 | -8.615850e-47 |
| Msa0178030 | Msa1411400 | 0.996271 | 1.928609e-225 | -8.615850e-47 |
| Msa0196020 | Msa1411400 | 0.812195 | 4.790826e-51 | -8.615850e-47 |
| Msa1259070 | Msa1411400 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa1269580 | Msa1411400 | 0.818826 | 1.600629e-52 | -8.615850e-47 |
| Msa0374250 | Msa1411400 | -0.815283 | 1.001031e-51 | -8.615850e-47 |
| Msa0436280 | Msa1411400 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0437510 | Msa1411400 | -0.807107 | 5.941968e-50 | -8.615850e-47 |
| Msa0469790 | Msa1411400 | -0.809360 | 1.966861e-50 | -8.615850e-47 |
| Msa0469820 | Msa1411400 | -0.810183 | 1.307998e-50 | -8.615850e-47 |
| Msa1069660 | Msa1411400 | 0.815157 | 1.067423e-51 | -8.615850e-47 |
| Msa1079370 | Msa1411400 | 0.801874 | 7.329669e-49 | -8.615850e-47 |
| Msa1208890 | Msa1411400 | 0.804575 | 2.022541e-49 | -8.615850e-47 |
| Msa0515380 | Msa1411400 | -0.810406 | 1.170847e-50 | -8.615850e-47 |
| Msa0586850 | Msa1411400 | -0.801161 | 1.025801e-48 | -8.615850e-47 |
| Msa0882440 | Msa1411400 | 0.835143 | 1.991539e-56 | -8.615850e-47 |
| Msa0947530 | Msa1411400 | 0.843466 | 1.377377e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411400 | MtrunA17_Chr1g0201001 | 92.081 | 442 | 13 | 3 | 2 | 421 | 131 | 572 | 0.0 | 785 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1411400 | AT1G71800.1 | 36.342 | 421 | 187 | 14 | 2 | 418 | 114 | 457 | 2.17e-47 | 169 |
Find 171 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTCCTCTAGATTTCA+TGG | 0.180877 | tig0023765:-20358 | Msa1411400:five_prime_UTR |
| CCTGCATTTGTTGTCATTCC+TGG | 0.191571 | tig0023765:+18849 | None:intergenic |
| TAGCTGACTCCTGGACATTT+TGG | 0.227036 | tig0023765:+18499 | None:intergenic |
| GATGGTCGTGTAAAGGATTC+TGG | 0.241286 | tig0023765:+15330 | None:intergenic |
| TTGGCCAGATGCAAAGTTAA+AGG | 0.247257 | tig0023765:+18518 | None:intergenic |
| CTTCAGGGTTATGAAATTAA+TGG | 0.257732 | tig0023765:-19879 | Msa1411400:five_prime_UTR |
| ATGCAGCAGCTATTTATTTC+CGG | 0.258112 | tig0023765:-14278 | Msa1411400:three_prime_UTR |
| ACTTGGCCTTCTTGAATATA+AGG | 0.269471 | tig0023765:+16353 | None:intergenic |
| CTCGCCAGCTGTTGCTTTCA+AGG | 0.272367 | tig0023765:-18345 | Msa1411400:CDS |
| AAGTGCTCGCAGGAATCTTC+AGG | 0.286972 | tig0023765:-19895 | Msa1411400:five_prime_UTR |
| TTTGATCTGAAACTTGTCTA+AGG | 0.312889 | tig0023765:+16489 | None:intergenic |
| TTAGTTACTGATAGAGAAAC+TGG | 0.317848 | tig0023765:-19969 | Msa1411400:five_prime_UTR |
| GGAATATTTACTACTACTTT+TGG | 0.323679 | tig0023765:+15398 | None:intergenic |
| TTCAATCTAGTGAGCTTTGA+TGG | 0.338386 | tig0023765:+15312 | None:intergenic |
| TCCCAACATCGCACTGTCTT+TGG | 0.343999 | tig0023765:-20324 | Msa1411400:intron |
| GATTTCGCGGAGAATGATAA+AGG | 0.353032 | tig0023765:-19840 | Msa1411400:five_prime_UTR |
| ATTAGCATTTGATGTAGATT+AGG | 0.355203 | tig0023765:-14184 | Msa1411400:three_prime_UTR |
| ATGACCTGTTGTTGCTGCTC+TGG | 0.359697 | tig0023765:+14371 | None:intergenic |
| GTTTCTGTCAAACCATCTTC+CGG | 0.360423 | tig0023765:+14225 | None:intergenic |
| GTGGCTGGTCTACCTCCTTA+TGG | 0.363208 | tig0023765:-16404 | Msa1411400:CDS |
| CCAACTCAATTTCCGGAAGA+TGG | 0.368592 | tig0023765:-14237 | Msa1411400:three_prime_UTR |
| GACGGAAGGGGTCTCTCTGC+TGG | 0.371801 | tig0023765:-15288 | Msa1411400:CDS |
| TGATCCTTTAACTTTGCATC+TGG | 0.378313 | tig0023765:-18522 | Msa1411400:CDS |
| GGCATCCCGTCAAATCAAAA+TGG | 0.382688 | tig0023765:-18572 | Msa1411400:CDS |
| GAGTGCCGCACATCTGCTTT+AGG | 0.383249 | tig0023765:+15192 | None:intergenic |
| TGAGATAATCTCAGAGCTTA+AGG | 0.385361 | tig0023765:-18474 | Msa1411400:intron |
| TGATCTCGTACACGCTCATT+TGG | 0.386751 | tig0023765:+14055 | None:intergenic |
| GCTGGCCCCTCCATGCCATC+TGG | 0.387717 | tig0023765:-15480 | Msa1411400:CDS |
| TTCCAACGCTCTTGAGGATT+GGG | 0.393799 | tig0023765:-15421 | Msa1411400:CDS |
| CTGCTCCAGGCTGTACAAAA+TGG | 0.394055 | tig0023765:+16231 | None:intergenic |
| CGTTAGGCCTCCATTTCAAC+AGG | 0.395720 | tig0023765:-16153 | Msa1411400:CDS |
| TCTGAAACTTGTCTAAGGTT+TGG | 0.398069 | tig0023765:+16494 | None:intergenic |
| GTTGAATTTGCCTGTTGAAA+TGG | 0.398282 | tig0023765:+16143 | None:intergenic |
| CTTCCAACGCTCTTGAGGAT+TGG | 0.405295 | tig0023765:-15422 | Msa1411400:CDS |
| GATCTCGCTTAAGCGCTTGT+TGG | 0.409240 | tig0023765:+14342 | None:intergenic |
| GAAACGAGGCATGCGGTTGC+TGG | 0.411669 | tig0023765:+16111 | None:intergenic |
| GGACAGAGCAAGTTGCAGTT+TGG | 0.411864 | tig0023765:-16383 | Msa1411400:CDS |
| GTAGTAAAGAGGAAGAAGAT+TGG | 0.428537 | tig0023765:-20396 | Msa1411400:five_prime_UTR |
| CATGACAGTTGCAGCTGTTA+CGG | 0.434365 | tig0023765:+18622 | None:intergenic |
| TGCTACAGAGGAACAGCTTA+AGG | 0.435110 | tig0023765:-20180 | Msa1411400:five_prime_UTR |
| TGGGATGATCCGTTGGAAAC+AGG | 0.435584 | tig0023765:+15252 | None:intergenic |
| TTACGGATTCTGTGAGTATA+CGG | 0.438452 | tig0023765:-19934 | Msa1411400:five_prime_UTR |
| CTACAACAACCAGTACTTGT+TGG | 0.440488 | tig0023765:-16089 | Msa1411400:CDS |
| CTAGGAACTGAAGGGTTATG+AGG | 0.441421 | tig0023765:+16320 | None:intergenic |
| TTCTCTTCTTCGTCGAAGAT+CGG | 0.441601 | tig0023765:-20453 | Msa1411400:five_prime_UTR |
| AGCAGCTCAACATCAACCTA+TGG | 0.442434 | tig0023765:-18657 | Msa1411400:CDS |
| GCGGATTCCCCTTGAACAGC+TGG | 0.443023 | tig0023765:+18683 | None:intergenic |
| GAAACAAAACATACCATTTG+AGG | 0.444720 | tig0023765:+16766 | None:intergenic |
| AGTTACCTAAAACTGATAAC+AGG | 0.450631 | tig0023765:+20137 | None:intergenic |
| AAAGCAACAGCTGGCGAGAC+AGG | 0.453850 | tig0023765:+18350 | None:intergenic |
| TGCAACTTGCTCTGTCCATA+AGG | 0.455902 | tig0023765:+16389 | None:intergenic |
| GCTCTAGGTGGTGCTCAGAC+TGG | 0.462210 | tig0023765:-18593 | Msa1411400:CDS |
| CTATTTATTTCCGGCGAATG+TGG | 0.469691 | tig0023765:-14269 | Msa1411400:three_prime_UTR |
| ACCAAAGACAGTGCGATGTT+GGG | 0.470255 | tig0023765:+20323 | None:intergenic |
| TTGCAGTCTTTAATGAATGA+AGG | 0.472823 | tig0023765:-16464 | Msa1411400:CDS |
| AAATTACTCTGCCCTGCTCC+AGG | 0.474984 | tig0023765:+16218 | None:intergenic |
| AATAATAATAATAATTATGC+TGG | 0.477702 | tig0023765:-13998 | Msa1411400:three_prime_UTR |
| GGAATTCTGGGCTGCAGAGG+AGG | 0.480025 | tig0023765:+16275 | None:intergenic |
| GCCACCAGAGCAGCAACAAC+AGG | 0.482149 | tig0023765:-14375 | Msa1411400:CDS |
| TATGAGGGAGAGTGCTGACT+TGG | 0.485477 | tig0023765:+16336 | None:intergenic |
| TACCAAAGACAGTGCGATGT+TGG | 0.485985 | tig0023765:+20322 | None:intergenic |
| TGTCTCACATAATATTCATA+TGG | 0.488387 | tig0023765:-16057 | Msa1411400:intron |
| GCAGGCATCCCAGCTGTTCA+AGG | 0.491886 | tig0023765:-18692 | Msa1411400:CDS |
| AACAGCTTAAGGAAATTTGT+CGG | 0.492117 | tig0023765:-20169 | Msa1411400:five_prime_UTR |
| TCACAGAATCCGTAACCCTT+AGG | 0.492474 | tig0023765:+19942 | None:intergenic |
| ACATTGGTTCCGACTGTGGC+TGG | 0.494341 | tig0023765:-16419 | Msa1411400:CDS |
| TAGAGAAACTGGGAAACCTA+AGG | 0.494630 | tig0023765:-19958 | Msa1411400:five_prime_UTR |
| ACCTGTTGTTGCTGCTCTGG+TGG | 0.497396 | tig0023765:+14374 | None:intergenic |
| ATTTCGCGGAGAATGATAAA+GGG | 0.497809 | tig0023765:-19839 | Msa1411400:five_prime_UTR |
| TATCTCAGATAGCTGACTCC+TGG | 0.499165 | tig0023765:+18490 | None:intergenic |
| GAATGATAGAAATAAAGATC+AGG | 0.504557 | tig0023765:-19817 | Msa1411400:intron |
| ACAGCTTAAGGAAATTTGTC+GGG | 0.507959 | tig0023765:-20168 | Msa1411400:five_prime_UTR |
| AGGGATGGTCAACCCTCAAA+TGG | 0.511686 | tig0023765:-16779 | Msa1411400:intron |
| CGGAACGGAGAGTGTGGTGG+TGG | 0.512595 | tig0023765:-20433 | Msa1411400:five_prime_UTR |
| ATGAGCTACTTCCGAGAACA+TGG | 0.512604 | tig0023765:+15232 | None:intergenic |
| GGCAAAGAACTCAATTGCTC+TGG | 0.513370 | tig0023765:+14395 | None:intergenic |
| AACGGATCATCCCATGTTCT+CGG | 0.513720 | tig0023765:-15243 | Msa1411400:CDS |
| GAGCTTTGATGGTCGTGTAA+AGG | 0.516650 | tig0023765:+15323 | None:intergenic |
| TTGCAGGCTCAGATAATGCT+AGG | 0.516928 | tig0023765:-16799 | Msa1411400:intron |
| AAACAAAACATACCATTTGA+GGG | 0.517549 | tig0023765:+16767 | None:intergenic |
| GCTTTAGGAACTACAGGTAC+AGG | 0.520667 | tig0023765:+15207 | None:intergenic |
| TCAATTACGTGTTGATTTCG+CGG | 0.523375 | tig0023765:-19853 | Msa1411400:five_prime_UTR |
| TTCATTCATTAAAGACTGCA+AGG | 0.524671 | tig0023765:+16466 | None:intergenic |
| TGCATCTGGCCAAAATGTCC+AGG | 0.526981 | tig0023765:-18508 | Msa1411400:CDS |
| TCTCAGTTATTTAGCAAGGA+AGG | 0.527111 | tig0023765:-15453 | Msa1411400:CDS |
| ACTGGGAAACCTAAGGGTTA+CGG | 0.530546 | tig0023765:-19951 | Msa1411400:five_prime_UTR |
| TGTCTAAACATTTATTGTTG+CGG | 0.530996 | tig0023765:-14087 | Msa1411400:three_prime_UTR |
| CTCTGATCAACAATCTTCAC+AGG | 0.531715 | tig0023765:-15172 | Msa1411400:intron |
| ACATCTGCTTTAGGAACTAC+AGG | 0.532755 | tig0023765:+15201 | None:intergenic |
| CCATCTTCCGGAAATTGAGT+TGG | 0.536318 | tig0023765:+14237 | None:intergenic |
| GTTGAGCTTCCAACAAGTAC+TGG | 0.536853 | tig0023765:+16080 | None:intergenic |
| TTCAAGGCCACAGTTGCCCA+AGG | 0.536874 | tig0023765:-18329 | Msa1411400:CDS |
| ACGGAAGGGGTCTCTCTGCT+GGG | 0.537514 | tig0023765:-15287 | Msa1411400:CDS |
| GAATTTACGGTCAATTGACT+AGG | 0.537953 | tig0023765:+16302 | None:intergenic |
| TGAGTATACGGATGAAGAAA+CGG | 0.542840 | tig0023765:-19922 | Msa1411400:five_prime_UTR |
| TTGACACCTTATATTCAAGA+AGG | 0.544580 | tig0023765:-16359 | Msa1411400:CDS |
| AAAACAGACTCCACATCAGA+TGG | 0.548177 | tig0023765:+14443 | None:intergenic |
| GGTGGTGGAACAAACGCTTA+TGG | 0.549732 | tig0023765:-20418 | Msa1411400:five_prime_UTR |
| GCAAAACAGACCACATTCGC+CGG | 0.550798 | tig0023765:+14259 | None:intergenic |
| GTAAAGAGGAAGAAGATTGG+AGG | 0.552792 | tig0023765:-20393 | Msa1411400:five_prime_UTR |
| AAGGAAATTTGTCGGGAGGT+TGG | 0.553535 | tig0023765:-20161 | Msa1411400:five_prime_UTR |
| GTCAATTGACTAGGAACTGA+AGG | 0.554552 | tig0023765:+16311 | None:intergenic |
| TAGACCTTCCAACGCTCTTG+AGG | 0.555033 | tig0023765:-15427 | Msa1411400:CDS |
| CAGGCATCCCAGCTGTTCAA+GGG | 0.559124 | tig0023765:-18691 | Msa1411400:CDS |
| CTGAGAAACACCAGATGGCA+TGG | 0.559268 | tig0023765:+15470 | None:intergenic |
| GATCTTCGACGAAGAAGAGA+AGG | 0.559351 | tig0023765:+20455 | None:intergenic |
| CGGATTCCCCTTGAACAGCT+GGG | 0.559565 | tig0023765:+18684 | None:intergenic |
| GTGGCCTTGAAAGCAACAGC+TGG | 0.561370 | tig0023765:+18341 | None:intergenic |
| AAAGATCCTCAGAAACAAGC+AGG | 0.562950 | tig0023765:-18710 | Msa1411400:intron |
| GGCCCAATCCTCAAGAGCGT+TGG | 0.563373 | tig0023765:+15419 | None:intergenic |
| CACTAGATTGAATGACGGAA+GGG | 0.565314 | tig0023765:-15301 | Msa1411400:CDS |
| GAAACACCAGATGGCATGGA+GGG | 0.566701 | tig0023765:+15474 | None:intergenic |
| GAGAACATGGGATGATCCGT+TGG | 0.567413 | tig0023765:+15245 | None:intergenic |
| ACTGTCATGACTGCAGCTCT+AGG | 0.569230 | tig0023765:-18608 | Msa1411400:CDS |
| TGGTTGCTTTGATGATGTTG+AGG | 0.572185 | tig0023765:+16251 | None:intergenic |
| GGTTGCTTTGATGATGTTGA+GGG | 0.575174 | tig0023765:+16252 | None:intergenic |
| TGTTCCTCTGTAGCATCATA+CGG | 0.577567 | tig0023765:+20188 | None:intergenic |
| TGCAGGCTCAGATAATGCTA+GGG | 0.580236 | tig0023765:-16798 | Msa1411400:intron |
| TTAATGAATGAAGGCCACCT+TGG | 0.580341 | tig0023765:-16455 | Msa1411400:CDS |
| GCAAACATTGGTTCCGACTG+TGG | 0.580561 | tig0023765:-16423 | Msa1411400:CDS |
| TAGGAACTGAAGGGTTATGA+GGG | 0.582212 | tig0023765:+16321 | None:intergenic |
| AGAGAAACTGGGAAACCTAA+GGG | 0.583753 | tig0023765:-19957 | Msa1411400:five_prime_UTR |
| CTGTTGAAATGGAGGCCTAA+CGG | 0.584880 | tig0023765:+16154 | None:intergenic |
| TAATATACAAGCGACAGACT+TGG | 0.586624 | tig0023765:+14203 | None:intergenic |
| ATTGCAGCTTCCATCTGATG+TGG | 0.588345 | tig0023765:-14453 | Msa1411400:intron |
| AAACGCTTATGGTAGTAAAG+AGG | 0.588404 | tig0023765:-20407 | Msa1411400:five_prime_UTR |
| AAAAGGGCCTTGGGCAACTG+TGG | 0.590501 | tig0023765:+18322 | None:intergenic |
| CCATGAAATCTAGAGGAAGA+AGG | 0.592393 | tig0023765:+20358 | None:intergenic |
| GGCTCAGATAATGCTAGGGA+TGG | 0.592888 | tig0023765:-16794 | Msa1411400:CDS |
| CCAGGAATGACAACAAATGC+AGG | 0.593867 | tig0023765:-18849 | Msa1411400:intron |
| GCAGCTCAACATCAACCTAT+GGG | 0.597807 | tig0023765:-18656 | Msa1411400:CDS |
| TGGAGTAGAGAATACAGGCA+TGG | 0.598088 | tig0023765:-15364 | Msa1411400:intron |
| TGTTTCTCAGTTATTTAGCA+AGG | 0.599326 | tig0023765:-15457 | Msa1411400:CDS |
| AGTGCTCGCAGGAATCTTCA+GGG | 0.600783 | tig0023765:-19894 | Msa1411400:five_prime_UTR |
| TTGCTTTGATGATGTTGAGG+GGG | 0.603891 | tig0023765:+16254 | None:intergenic |
| ACTAGATTGAATGACGGAAG+GGG | 0.604842 | tig0023765:-15300 | Msa1411400:CDS |
| TCACTAGATTGAATGACGGA+AGG | 0.606926 | tig0023765:-15302 | Msa1411400:CDS |
| AAACGGCGTTAAGTGCTCGC+AGG | 0.607116 | tig0023765:-19905 | Msa1411400:five_prime_UTR |
| AAACACCAGATGGCATGGAG+GGG | 0.611101 | tig0023765:+15475 | None:intergenic |
| ATCTTCGACGAAGAAGAGAA+GGG | 0.613914 | tig0023765:+20456 | None:intergenic |
| AGGCATCCCAGCTGTTCAAG+GGG | 0.622558 | tig0023765:-18690 | Msa1411400:CDS |
| GAATTTGCCTGTTGAAATGG+AGG | 0.624335 | tig0023765:+16146 | None:intergenic |
| TGGTCAGACTCAGCAAACAT+TGG | 0.627121 | tig0023765:-16435 | Msa1411400:CDS |
| ACAGTGCGATGTTGGGACTG+AGG | 0.628763 | tig0023765:+20330 | None:intergenic |
| GGAGGTAGACCAGCCACAGT+CGG | 0.632403 | tig0023765:+16410 | None:intergenic |
| CAATCCTCAAGAGCGTTGGA+AGG | 0.638608 | tig0023765:+15423 | None:intergenic |
| GCTTAAGGAAATTTGTCGGG+AGG | 0.640077 | tig0023765:-20165 | Msa1411400:five_prime_UTR |
| GGGAATGGCTACACACAACA+AGG | 0.640493 | tig0023765:-18374 | Msa1411400:CDS |
| ACGGCAATATGAAGACCCAT+AGG | 0.645378 | tig0023765:+18641 | None:intergenic |
| GAAGATCGGAACGGAGAGTG+TGG | 0.646474 | tig0023765:-20439 | Msa1411400:five_prime_UTR |
| AAGCTCACTAGATTGAATGA+CGG | 0.654821 | tig0023765:-15306 | Msa1411400:CDS |
| GGAGCAGCCATGAAATCTAG+AGG | 0.660272 | tig0023765:+20351 | None:intergenic |
| TCAGACGTACCTGTTTCCAA+CGG | 0.662727 | tig0023765:-15261 | Msa1411400:CDS |
| TTGATGTTGAGCTGCTTGAG+CGG | 0.668086 | tig0023765:+18664 | None:intergenic |
| GATCGGAACGGAGAGTGTGG+TGG | 0.668884 | tig0023765:-20436 | Msa1411400:five_prime_UTR |
| TCAATTGACTAGGAACTGAA+GGG | 0.671116 | tig0023765:+16312 | None:intergenic |
| AGAAACACCAGATGGCATGG+AGG | 0.671498 | tig0023765:+15473 | None:intergenic |
| TGAGCTACTTCCGAGAACAT+GGG | 0.671623 | tig0023765:+15233 | None:intergenic |
| AACTTGCTCTGTCCATAAGG+AGG | 0.678416 | tig0023765:+16392 | None:intergenic |
| TTCTTCGTCGAAGATCGGAA+CGG | 0.680244 | tig0023765:-20448 | Msa1411400:five_prime_UTR |
| ATGCAGCACTCATAACACAC+TGG | 0.680734 | tig0023765:-14317 | Msa1411400:exon |
| TACTGGTTGTTGTAGAAACG+AGG | 0.682430 | tig0023765:+16097 | None:intergenic |
| AATAACTGAGAAACACCAGA+TGG | 0.684873 | tig0023765:+15465 | None:intergenic |
| TGTTGTAGAAACGAGGCATG+CGG | 0.697168 | tig0023765:+16104 | None:intergenic |
| GTCATGACTGCAGCTCTAGG+TGG | 0.698596 | tig0023765:-18605 | Msa1411400:CDS |
| TAGTTACTGATAGAGAAACT+GGG | 0.706301 | tig0023765:-19968 | Msa1411400:five_prime_UTR |
| TAGTTCCTAAAGCAGATGTG+CGG | 0.707036 | tig0023765:-15197 | Msa1411400:CDS |
| GTTGCTTTGATGATGTTGAG+GGG | 0.707097 | tig0023765:+16253 | None:intergenic |
| CATACCGTATGATGCTACAG+AGG | 0.722663 | tig0023765:-20192 | Msa1411400:five_prime_UTR |
| TTTGCTGAGTCTGACCAAGG+TGG | 0.729027 | tig0023765:+16441 | None:intergenic |
| ATGTTTGCTGAGTCTGACCA+AGG | 0.742426 | tig0023765:+16438 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTTTTATGTTAAAAAA+AGG | - | tig0023765:14373-14392 | Msa1411400:CDS | 10.0% |
| !!! | AAAAAATTGATTTTTTATGT+TGG | - | tig0023765:14438-14457 | Msa1411400:CDS | 10.0% |
| !!! | AAAAATTGATTTTTTATGTT+GGG | - | tig0023765:14439-14458 | Msa1411400:CDS | 10.0% |
| !! | AAACTAAATCATATATAAAT+AGG | + | tig0023765:17568-17587 | None:intergenic | 10.0% |
| !!! | TGTTAATCTTTTTAATAAAT+TGG | - | tig0023765:19403-19422 | Msa1411400:intron | 10.0% |
| !! | AATAATAATAATAATTATGC+TGG | - | tig0023765:20465-20484 | Msa1411400:five_prime_UTR | 10.0% |
| !!! | TATTGATAACTCAATTTAAT+TGG | + | tig0023765:15370-15389 | None:intergenic | 15.0% |
| !! | AAATTGAAAAATATGAACAA+AGG | + | tig0023765:16596-16615 | None:intergenic | 15.0% |
| !! | TAATACAATTTACATTTACT+AGG | - | tig0023765:16872-16891 | Msa1411400:intron | 15.0% |
| !! | AAAACTATTATATAGATAGA+TGG | + | tig0023765:17250-17269 | None:intergenic | 15.0% |
| !!! | TATATATGATTTAGTTTCAT+TGG | - | tig0023765:17571-17590 | Msa1411400:intron | 15.0% |
| !! | AAACATTAATCTCTAAATAT+AGG | + | tig0023765:17598-17617 | None:intergenic | 15.0% |
| !!! | TTTAATTTATATTTTAACCG+CGG | - | tig0023765:18593-18612 | Msa1411400:CDS | 15.0% |
| !!! | TTTTTTTTTTGAGAAAGTAA+TGG | - | tig0023765:18832-18851 | Msa1411400:intron | 15.0% |
| !! | TTACTACTACTTAAATAATT+AGG | - | tig0023765:19442-19461 | Msa1411400:intron | 15.0% |
| !! | TAAGAACAAAAACAAAAGAT+AGG | + | tig0023765:14181-14200 | None:intergenic | 20.0% |
| !!! | TGTTATAAATTCCTTTGTTT+GGG | + | tig0023765:14868-14887 | None:intergenic | 20.0% |
| !! | ATGTTATAAATTCCTTTGTT+TGG | + | tig0023765:14869-14888 | None:intergenic | 20.0% |
| !!! | TGAAGGATAATTATTTTGTA+AGG | + | tig0023765:15120-15139 | None:intergenic | 20.0% |
| !!! | ATATGAAATTGATTTCACAT+TGG | - | tig0023765:15308-15327 | Msa1411400:CDS | 20.0% |
| !! | TAACGGTAAAAAGAAAAAAA+AGG | + | tig0023765:15733-15752 | None:intergenic | 20.0% |
| !!! | ATAGTTTTATACCTGAAAAA+GGG | + | tig0023765:16160-16179 | None:intergenic | 20.0% |
| !!! | TATAGTTTTATACCTGAAAA+AGG | + | tig0023765:16161-16180 | None:intergenic | 20.0% |
| !! | CCTATATTTACAATAATCTT+GGG | + | tig0023765:16720-16739 | None:intergenic | 20.0% |
| !! | CCAAGATTATTGTAAATATA+GGG | - | tig0023765:16718-16737 | Msa1411400:intron | 20.0% |
| !! | TTGGAATTAGTATTAGTATT+GGG | + | tig0023765:16997-17016 | None:intergenic | 20.0% |
| !! | ATTCGTCTATTTATAGAATA+GGG | - | tig0023765:17404-17423 | Msa1411400:intron | 20.0% |
| !! | ATAACAACAAAATCTAACTT+GGG | + | tig0023765:17464-17483 | None:intergenic | 20.0% |
| !! | ACTTTATTGAATATAGAGTT+TGG | - | tig0023765:17510-17529 | Msa1411400:intron | 20.0% |
| !! | CTTTATTGAATATAGAGTTT+GGG | - | tig0023765:17511-17530 | Msa1411400:intron | 20.0% |
| !!! | TTACATTTTTTTGTAATTGC+AGG | - | tig0023765:17648-17667 | Msa1411400:intron | 20.0% |
| !! | TGGAATTTAATCAAGAAAAA+AGG | + | tig0023765:17727-17746 | None:intergenic | 20.0% |
| !!! | TTGATTAAATTCCATTTTCA+TGG | - | tig0023765:17733-17752 | Msa1411400:intron | 20.0% |
| !! | AAAATAACACAAGCAAAATT+TGG | + | tig0023765:18458-18477 | None:intergenic | 20.0% |
| !! | CTAACTAATAATTGTTATCT+TGG | - | tig0023765:19486-19505 | Msa1411400:intron | 20.0% |
| !! | GAGATATTAAATTCTAATGT+AGG | - | tig0023765:19571-19590 | Msa1411400:intron | 20.0% |
| !!! | GATATTTTGAATGAATGATT+TGG | - | tig0023765:19645-19664 | Msa1411400:intron | 20.0% |
| !! | CAGCTTATAAAAATTATAAG+TGG | + | tig0023765:19700-19719 | None:intergenic | 20.0% |
| !! | TTTACGACAATTTTTGTAGT+TGG | - | tig0023765:14245-14264 | Msa1411400:three_prime_UTR | 25.0% |
| !! | TTACGACAATTTTTGTAGTT+GGG | - | tig0023765:14246-14265 | Msa1411400:three_prime_UTR | 25.0% |
| !! | TTTTTATGTGTTTGTAGTTG+TGG | - | tig0023765:14397-14416 | Msa1411400:CDS | 25.0% |
| !! | TTTTATGTGTTTGTAGTTGT+GGG | - | tig0023765:14398-14417 | Msa1411400:CDS | 25.0% |
| ! | GAATGATAGAAATAAAGATC+AGG | - | tig0023765:14646-14665 | Msa1411400:intron | 25.0% |
| ! | ATAAAGATCAGGTATATTGT+TGG | - | tig0023765:14657-14676 | Msa1411400:intron | 25.0% |
| !! | ATCTTTGCATTGTTTTCTTT+TGG | - | tig0023765:14703-14722 | Msa1411400:intron | 25.0% |
| !! | TCTTTGCATTGTTTTCTTTT+GGG | - | tig0023765:14704-14723 | Msa1411400:intron | 25.0% |
| ! | GTATGTCTTTACAAAAAGTT+AGG | + | tig0023765:14951-14970 | None:intergenic | 25.0% |
| ! | ATCCTTCATTAAAGTTTCAA+TGG | - | tig0023765:15132-15151 | Msa1411400:intron | 25.0% |
| ! | TACCATTGAAACTTTAATGA+AGG | + | tig0023765:15137-15156 | None:intergenic | 25.0% |
| !!! | CTATTATTTTTGTAACAGCT+TGG | + | tig0023765:15399-15418 | None:intergenic | 25.0% |
| !!! | TTGTATGTTTTAGATTTCCT+TGG | - | tig0023765:16270-16289 | Msa1411400:CDS | 25.0% |
| ! | AATAACTAAGATAGTTGTAG+TGG | - | tig0023765:16455-16474 | Msa1411400:CDS | 25.0% |
| ! | ATAACTAAGATAGTTGTAGT+GGG | - | tig0023765:16456-16475 | Msa1411400:CDS | 25.0% |
| !!! | TATCTGTCTGGTTTTTTTTT+TGG | + | tig0023765:16526-16545 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACCAGACAGAT+AGG | - | tig0023765:16525-16544 | Msa1411400:intron | 25.0% |
| ! | AAAAAAAAACCAGACAGATA+GGG | - | tig0023765:16526-16545 | Msa1411400:intron | 25.0% |
| ! | CCCAAGATTATTGTAAATAT+AGG | - | tig0023765:16717-16736 | Msa1411400:intron | 25.0% |
| ! | CCCTATATTTACAATAATCT+TGG | + | tig0023765:16721-16740 | None:intergenic | 25.0% |
| ! | GTTGGAATTAGTATTAGTAT+TGG | + | tig0023765:16998-17017 | None:intergenic | 25.0% |
| ! | CTAGAAAAAAAAGCAACATT+TGG | + | tig0023765:17084-17103 | None:intergenic | 25.0% |
| !!! | CAAATGTTGCTTTTTTTTCT+AGG | - | tig0023765:17082-17101 | Msa1411400:intron | 25.0% |
| ! | CATTCGTCTATTTATAGAAT+AGG | - | tig0023765:17403-17422 | Msa1411400:intron | 25.0% |
| ! | CATAACAACAAAATCTAACT+TGG | + | tig0023765:17465-17484 | None:intergenic | 25.0% |
| ! | AAACAAAACATACCATTTGA+GGG | + | tig0023765:17699-17718 | None:intergenic | 25.0% |
| ! | ACAAAAATTTGCCATGAAAA+TGG | + | tig0023765:17747-17766 | None:intergenic | 25.0% |
| ! | TGTCTCACATAATATTCATA+TGG | - | tig0023765:18406-18425 | Msa1411400:intron | 25.0% |
| ! | CCTGTTTAATAAATGAAGTT+AGG | + | tig0023765:18964-18983 | None:intergenic | 25.0% |
| ! | CCTAACTTCATTTATTAAAC+AGG | - | tig0023765:18961-18980 | Msa1411400:intron | 25.0% |
| !! | GGAATATTTACTACTACTTT+TGG | + | tig0023765:19068-19087 | None:intergenic | 25.0% |
| !! | AAATATTCCAACGTATCTTT+TGG | - | tig0023765:19079-19098 | Msa1411400:intron | 25.0% |
| ! | CTACTACTTAAATAATTAGG+TGG | - | tig0023765:19445-19464 | Msa1411400:intron | 25.0% |
| !!! | TTTTTAAGAGCCAGTTTTTT+GGG | + | tig0023765:19546-19565 | None:intergenic | 25.0% |
| ! | TTCATTCAAAATATCAGATG+AGG | + | tig0023765:19640-19659 | None:intergenic | 25.0% |
| ! | TTTCACCATTAAAATGCATT+GGG | + | tig0023765:19728-19747 | None:intergenic | 25.0% |
| ! | ATTTCACCATTAAAATGCAT+TGG | + | tig0023765:19729-19748 | None:intergenic | 25.0% |
| ! | ATTGTGAAAAAAACTTGAGA+GGG | + | tig0023765:19763-19782 | None:intergenic | 25.0% |
| ! | AATTGTGAAAAAAACTTGAG+AGG | + | tig0023765:19764-19783 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTCACAATTGAG+AGG | - | tig0023765:19767-19786 | Msa1411400:intron | 25.0% |
| !!! | ATGAGGAGAGTATTTAAAAA+TGG | - | tig0023765:19805-19824 | Msa1411400:intron | 25.0% |
| !!! | TGAGGAGAGTATTTAAAAAT+GGG | - | tig0023765:19806-19825 | Msa1411400:intron | 25.0% |
| ! | AGTATTTAAAAATGGGGAAT+AGG | - | tig0023765:19813-19832 | Msa1411400:intron | 25.0% |
| ! | ATGTTGAAAACAAAACATGA+GGG | + | tig0023765:19872-19891 | None:intergenic | 25.0% |
| !! | GAATGGTGATTTTATATATC+AGG | + | tig0023765:19974-19993 | None:intergenic | 25.0% |
| ! | TTGAGCAAAGATAATAAGAA+TGG | + | tig0023765:19991-20010 | None:intergenic | 25.0% |
| ! | ATTAGCATTTGATGTAGATT+AGG | - | tig0023765:20279-20298 | Msa1411400:intron | 25.0% |
| ! | TGTCTAAACATTTATTGTTG+CGG | - | tig0023765:20376-20395 | Msa1411400:five_prime_UTR | 25.0% |
| AACAGCTTAAGGAAATTTGT+CGG | - | tig0023765:14294-14313 | Msa1411400:three_prime_UTR | 30.0% | |
| AGTTACCTAAAACTGATAAC+AGG | + | tig0023765:14329-14348 | None:intergenic | 30.0% | |
| TTAGTTACTGATAGAGAAAC+TGG | - | tig0023765:14494-14513 | Msa1411400:intron | 30.0% | |
| TAGTTACTGATAGAGAAACT+GGG | - | tig0023765:14495-14514 | Msa1411400:intron | 30.0% | |
| CTTCAGGGTTATGAAATTAA+TGG | - | tig0023765:14584-14603 | Msa1411400:intron | 30.0% | |
| !!! | GTTTTCTTTTGGGTTTTGTT+AGG | - | tig0023765:14714-14733 | Msa1411400:intron | 30.0% |
| !!! | TTTTTAAAGCTCCCAAACAA+AGG | - | tig0023765:14854-14873 | Msa1411400:intron | 30.0% |
| ATTGTATTTACTATTCCCCA+TGG | - | tig0023765:15012-15031 | Msa1411400:intron | 30.0% | |
| CTCACATTGATCAATATGTT+TGG | + | tig0023765:15253-15272 | None:intergenic | 30.0% | |
| CTATACGAGCATGAAAAAAT+GGG | + | tig0023765:15510-15529 | None:intergenic | 30.0% | |
| !! | AGGAACATTTTAATCCATGA+TGG | + | tig0023765:15566-15585 | None:intergenic | 30.0% |
| ! | TTCCTTTTTCTTTTACTGCA+GGG | - | tig0023765:15581-15600 | Msa1411400:intron | 30.0% |
| AAAGGAGAAAATGAAAACAC+AGG | + | tig0023765:15715-15734 | None:intergenic | 30.0% | |
| !! | TGTTTCTGAGGATCTTTTAA+CGG | + | tig0023765:15750-15769 | None:intergenic | 30.0% |
| !!! | TGCAAACCATTTTGATTTGA+CGG | + | tig0023765:15900-15919 | None:intergenic | 30.0% |
| !!! | AAGCTAACTTCTTTTTTTCC+TGG | - | tig0023765:16025-16044 | Msa1411400:intron | 30.0% |
| AGTCAAGAAAAAGATTATCC+AGG | + | tig0023765:16046-16065 | None:intergenic | 30.0% | |
| !! | CTTGTTTGTTGTTGTTATGA+TGG | - | tig0023765:16064-16083 | Msa1411400:CDS | 30.0% |
| ATGCACAAAGGAATTGAAAT+GGG | + | tig0023765:16193-16212 | None:intergenic | 30.0% | |
| !! | TTGTATGTTTTAGATGTCCT+TGG | - | tig0023765:16354-16373 | Msa1411400:CDS | 30.0% |
| CAAACATATAGTCAGAATGA+AGG | + | tig0023765:16387-16406 | None:intergenic | 30.0% | |
| ! | TGATTTGAAATCAGACAGAT+AGG | - | tig0023765:16482-16501 | Msa1411400:CDS | 30.0% |
| ! | GATTTGAAATCAGACAGATA+GGG | - | tig0023765:16483-16502 | Msa1411400:CDS | 30.0% |
| GCAAAAGAAGAATGAATCAT+TGG | - | tig0023765:16566-16585 | Msa1411400:intron | 30.0% | |
| ATGTTGAAATCTGACCTTAA+AGG | - | tig0023765:16646-16665 | Msa1411400:intron | 30.0% | |
| TTGGATATTCTCTAGATTCA+TGG | - | tig0023765:16928-16947 | Msa1411400:intron | 30.0% | |
| TTTGAACACACAATTGTTCT+GGG | - | tig0023765:17316-17335 | Msa1411400:intron | 30.0% | |
| TATAAATAGACGAATGCTCA+AGG | + | tig0023765:17399-17418 | None:intergenic | 30.0% | |
| AGAGAGATCAGAAATAACTT+AGG | + | tig0023765:17439-17458 | None:intergenic | 30.0% | |
| GGTTAAAACTTTCAACTTAG+AGG | + | tig0023765:17547-17566 | None:intergenic | 30.0% | |
| GAAACAAAACATACCATTTG+AGG | + | tig0023765:17700-17719 | None:intergenic | 30.0% | |
| CTAAATCAAATCCTAAGTCA+CGG | + | tig0023765:17773-17792 | None:intergenic | 30.0% | |
| ! | GTGACTTAGGATTTGATTTA+GGG | - | tig0023765:17772-17791 | Msa1411400:intron | 30.0% |
| CAGAGGCAGTAATAAAATAT+TGG | + | tig0023765:17893-17912 | None:intergenic | 30.0% | |
| AAAACATATCTACTCTTCAG+AGG | + | tig0023765:17910-17929 | None:intergenic | 30.0% | |
| TTCATTCATTAAAGACTGCA+AGG | + | tig0023765:18000-18019 | None:intergenic | 30.0% | |
| TTGCAGTCTTTAATGAATGA+AGG | - | tig0023765:17999-18018 | Msa1411400:intron | 30.0% | |
| TTGACACCTTATATTCAAGA+AGG | - | tig0023765:18104-18123 | Msa1411400:intron | 30.0% | |
| TGTTCAAAACACTCAAATCT+AGG | + | tig0023765:18501-18520 | None:intergenic | 30.0% | |
| !! | TGAGTGTTTTGAACAATGTA+TGG | - | tig0023765:18506-18525 | Msa1411400:CDS | 30.0% |
| !! | GAGTGTTTTGAACAATGTAT+GGG | - | tig0023765:18507-18526 | Msa1411400:CDS | 30.0% |
| TTAGAATGTACTACGCATTT+AGG | - | tig0023765:18548-18567 | Msa1411400:CDS | 30.0% | |
| ACTTCATTTATTAAACAGGC+TGG | - | tig0023765:18965-18984 | Msa1411400:intron | 30.0% | |
| TGTTTCTCAGTTATTTAGCA+AGG | - | tig0023765:19006-19025 | Msa1411400:intron | 30.0% | |
| GAAAATTACTCATTGTCACT+TGG | + | tig0023765:19347-19366 | None:intergenic | 30.0% | |
| !! | CATGAATTTGTTAGATGCTT+TGG | - | tig0023765:19372-19391 | Msa1411400:intron | 30.0% |
| TTTGTTAGATGCTTTGGTAT+TGG | - | tig0023765:19378-19397 | Msa1411400:intron | 30.0% | |
| GTGAAAATTTCCCAAAAAAC+TGG | - | tig0023765:19533-19552 | Msa1411400:intron | 30.0% | |
| !! | CTTTTTAAGAGCCAGTTTTT+TGG | + | tig0023765:19547-19566 | None:intergenic | 30.0% |
| ! | AAAATATCAGATGAGGTGTT+GGG | + | tig0023765:19633-19652 | None:intergenic | 30.0% |
| TTCTCACCATTAAAATGCAT+TGG | - | tig0023765:19671-19690 | Msa1411400:intron | 30.0% | |
| TAAATACTCTCCTCATTCAA+CGG | + | tig0023765:19801-19820 | None:intergenic | 30.0% | |
| !! | GAGGAGAGTATTTAAAAATG+GGG | - | tig0023765:19807-19826 | Msa1411400:intron | 30.0% |
| ATTTAAAAATGGGGAATAGG+AGG | - | tig0023765:19816-19835 | Msa1411400:intron | 30.0% | |
| TGTTGAAAACAAAACATGAG+GGG | + | tig0023765:19871-19890 | None:intergenic | 30.0% | |
| CATGTTGAAAACAAAACATG+AGG | + | tig0023765:19873-19892 | None:intergenic | 30.0% | |
| !!! | TGTTTTGTTTTCAACATGAG+AGG | - | tig0023765:19875-19894 | Msa1411400:five_prime_UTR | 30.0% |
| ACATGGATCAAATAAGATTG+TGG | + | tig0023765:19940-19959 | None:intergenic | 30.0% | |
| AAACGCTTATGGTAGTAAAG+AGG | - | tig0023765:14056-14075 | Msa1411400:three_prime_UTR | 35.0% | |
| GTAGTAAAGAGGAAGAAGAT+TGG | - | tig0023765:14067-14086 | Msa1411400:three_prime_UTR | 35.0% | |
| ACAGCTTAAGGAAATTTGTC+GGG | - | tig0023765:14295-14314 | Msa1411400:three_prime_UTR | 35.0% | |
| ! | TTGGTCCTGTTATCAGTTTT+AGG | - | tig0023765:14321-14340 | Msa1411400:exon | 35.0% |
| TTACGGATTCTGTGAGTATA+CGG | - | tig0023765:14529-14548 | Msa1411400:intron | 35.0% | |
| TGAGTATACGGATGAAGAAA+CGG | - | tig0023765:14541-14560 | Msa1411400:intron | 35.0% | |
| !! | TCAATTACGTGTTGATTTCG+CGG | - | tig0023765:14610-14629 | Msa1411400:intron | 35.0% |
| ATTTCGCGGAGAATGATAAA+GGG | - | tig0023765:14624-14643 | Msa1411400:intron | 35.0% | |
| CAGGTATATTGTTGGAACTT+CGG | - | tig0023765:14665-14684 | Msa1411400:intron | 35.0% | |
| ! | AAAGAAAAGGGAAGGGTTTT+TGG | - | tig0023765:14756-14775 | Msa1411400:intron | 35.0% |
| ! | AAGAAAAGGGAAGGGTTTTT+GGG | - | tig0023765:14757-14776 | Msa1411400:intron | 35.0% |
| !! | CTTTTAGGAGGGAAGAAAAA+TGG | + | tig0023765:14894-14913 | None:intergenic | 35.0% |
| ! | TCATCTACTGCACTTCTTTT+AGG | + | tig0023765:14909-14928 | None:intergenic | 35.0% |
| GCCAAAGTGACTTATCATTT+GGG | + | tig0023765:15038-15057 | None:intergenic | 35.0% | |
| TGCCAAAGTGACTTATCATT+TGG | + | tig0023765:15039-15058 | None:intergenic | 35.0% | |
| !! | AGACAACTTTTTCTCCCAAA+TGG | - | tig0023765:15181-15200 | Msa1411400:CDS | 35.0% |
| TCCCAAATGGCTCATAATTT+GGG | - | tig0023765:15194-15213 | Msa1411400:CDS | 35.0% | |
| TCCCAAATTATGAGCCATTT+GGG | + | tig0023765:15198-15217 | None:intergenic | 35.0% | |
| ATCCCAAATTATGAGCCATT+TGG | + | tig0023765:15199-15218 | None:intergenic | 35.0% | |
| AAATGGCTCATAATTTGGGA+TGG | - | tig0023765:15198-15217 | Msa1411400:CDS | 35.0% | |
| TTGATCAATGTGAGACCAAA+AGG | - | tig0023765:15259-15278 | Msa1411400:CDS | 35.0% | |
| ! | GAGTAGTAACTGTTTCCTTT+TGG | + | tig0023765:15277-15296 | None:intergenic | 35.0% |
| CCTATACGAGCATGAAAAAA+TGG | + | tig0023765:15511-15530 | None:intergenic | 35.0% | |
| !!! | CCATTTTTTCATGCTCGTAT+AGG | - | tig0023765:15508-15527 | Msa1411400:intron | 35.0% |
| GCTTAATTTCAGTTCCATCA+TGG | - | tig0023765:15549-15568 | Msa1411400:intron | 35.0% | |
| ! | GTTCCTTTTTCTTTTACTGC+AGG | - | tig0023765:15580-15599 | Msa1411400:intron | 35.0% |
| !!! | GCAAACCATTTTGATTTGAC+GGG | + | tig0023765:15899-15918 | None:intergenic | 35.0% |
| ! | TGATCCTTTAACTTTGCATC+TGG | - | tig0023765:15941-15960 | Msa1411400:intron | 35.0% |
| TGAGATAATCTCAGAGCTTA+AGG | - | tig0023765:15989-16008 | Msa1411400:intron | 35.0% | |
| !! | TTTGTTGTTGTTATGATGGC+AGG | - | tig0023765:16068-16087 | Msa1411400:CDS | 35.0% |
| ! | TTGTTGTTGTTATGATGGCA+GGG | - | tig0023765:16069-16088 | Msa1411400:CDS | 35.0% |
| CATGCACAAAGGAATTGAAA+TGG | + | tig0023765:16194-16213 | None:intergenic | 35.0% | |
| AGAATGAAGGAATATAGCCA+AGG | + | tig0023765:16374-16393 | None:intergenic | 35.0% | |
| ! | TTGATCTTGTCAGACTTGTT+AGG | + | tig0023765:16672-16691 | None:intergenic | 35.0% |
| AATAATCTTGGGACTAACTG+TGG | + | tig0023765:16709-16728 | None:intergenic | 35.0% | |
| ! | ATATAGGGAGAGAGTTTTTC+TGG | - | tig0023765:16733-16752 | Msa1411400:intron | 35.0% |
| AGAATATCCAACATGCACTT+AGG | + | tig0023765:16919-16938 | None:intergenic | 35.0% | |
| GAGTTGCAGCAATTATATTC+AGG | + | tig0023765:16975-16994 | None:intergenic | 35.0% | |
| ATACTAATTCCAACTCTCCA+TGG | - | tig0023765:17004-17023 | Msa1411400:intron | 35.0% | |
| AGAGATGGACAGATAGTATT+GGG | + | tig0023765:17041-17060 | None:intergenic | 35.0% | |
| AAGAGATGGACAGATAGTAT+TGG | + | tig0023765:17042-17061 | None:intergenic | 35.0% | |
| TAACCTACTACAAGTCTCTA+AGG | + | tig0023765:17128-17147 | None:intergenic | 35.0% | |
| TAGAGACTTGTAGTAGGTTA+TGG | - | tig0023765:17128-17147 | Msa1411400:intron | 35.0% | |
| AGAGACTTGTAGTAGGTTAT+GGG | - | tig0023765:17129-17148 | Msa1411400:intron | 35.0% | |
| !! | GTTGTTCTAGGATCTATGTA+TGG | - | tig0023765:17167-17186 | Msa1411400:intron | 35.0% |
| GCTCAAGGAAGTCAATTATA+TGG | + | tig0023765:17225-17244 | None:intergenic | 35.0% | |
| TATAGATAGATGGATGCTCA+AGG | + | tig0023765:17240-17259 | None:intergenic | 35.0% | |
| !! | GAGATTGGTTTATATGCACA+AGG | + | tig0023765:17282-17301 | None:intergenic | 35.0% |
| AACCAATCTCATAATGTGAC+AGG | - | tig0023765:17292-17311 | Msa1411400:intron | 35.0% | |
| CTTTGAACACACAATTGTTC+TGG | - | tig0023765:17315-17334 | Msa1411400:intron | 35.0% | |
| !! | ATTGTTCTGGGATCTATGTA+TGG | - | tig0023765:17328-17347 | Msa1411400:intron | 35.0% |
| TATGTATGGTTCACAGCAAT+TGG | - | tig0023765:17342-17361 | Msa1411400:intron | 35.0% | |
| GCTCAAGGAAGTCAATTAAA+TGG | + | tig0023765:17384-17403 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCATCCGTGACTT+AGG | - | tig0023765:17759-17778 | Msa1411400:intron | 35.0% |
| ! | CGTGACTTAGGATTTGATTT+AGG | - | tig0023765:17771-17790 | Msa1411400:intron | 35.0% |
| CAGTTAAAAGCTTCGGAAAT+TGG | + | tig0023765:17803-17822 | None:intergenic | 35.0% | |
| CCATGTTCAGTTAAAAGCTT+CGG | + | tig0023765:17810-17829 | None:intergenic | 35.0% | |
| ! | ACTTGGCCTTCTTGAATATA+AGG | + | tig0023765:18113-18132 | None:intergenic | 35.0% |
| TCAATTGACTAGGAACTGAA+GGG | + | tig0023765:18154-18173 | None:intergenic | 35.0% | |
| GAATTTACGGTCAATTGACT+AGG | + | tig0023765:18164-18183 | None:intergenic | 35.0% | |
| GTTGAATTTGCCTGTTGAAA+TGG | + | tig0023765:18323-18342 | None:intergenic | 35.0% | |
| !!! | TATTTTAACCGCGGTTTGTA+TGG | - | tig0023765:18602-18621 | Msa1411400:CDS | 35.0% |
| TCTCTCTTATACTATGCTAC+AGG | + | tig0023765:18641-18660 | None:intergenic | 35.0% | |
| GTGTGTATCAATCACATGTT+TGG | + | tig0023765:18673-18692 | None:intergenic | 35.0% | |
| AACTAAGAGCAATTCCAATG+TGG | - | tig0023765:18696-18715 | Msa1411400:CDS | 35.0% | |
| ACTAAGAGCAATTCCAATGT+GGG | - | tig0023765:18697-18716 | Msa1411400:CDS | 35.0% | |
| ! | TGGCTTTTACATGTAGTACT+TGG | + | tig0023765:18858-18877 | None:intergenic | 35.0% |
| AGAGTAGAATGAAGAGAGAT+TGG | + | tig0023765:18878-18897 | None:intergenic | 35.0% | |
| AATAACTGAGAAACACCAGA+TGG | + | tig0023765:19001-19020 | None:intergenic | 35.0% | |
| TCTCAGTTATTTAGCAAGGA+AGG | - | tig0023765:19010-19029 | Msa1411400:intron | 35.0% | |
| !!! | TCTTTTGGAGTAGAGAATAC+AGG | - | tig0023765:19094-19113 | Msa1411400:intron | 35.0% |
| ! | TTCAATCTAGTGAGCTTTGA+TGG | + | tig0023765:19154-19173 | None:intergenic | 35.0% |
| AAGCTCACTAGATTGAATGA+CGG | - | tig0023765:19157-19176 | Msa1411400:intron | 35.0% | |
| CAAAATATCAGATGAGGTGT+TGG | + | tig0023765:19634-19653 | None:intergenic | 35.0% | |
| ! | TGGTGTCCAATGCATTTTAA+TGG | + | tig0023765:19680-19699 | None:intergenic | 35.0% |
| ! | TAGAGCCCAATGCATTTTAA+TGG | - | tig0023765:19720-19739 | Msa1411400:intron | 35.0% |
| AAAAACTTGAGAGGGTTATG+TGG | + | tig0023765:19755-19774 | None:intergenic | 35.0% | |
| GTTGAAAACAAAACATGAGG+GGG | + | tig0023765:19870-19889 | None:intergenic | 35.0% | |
| ATCAGAATAGCAGCATTAGA+CGG | + | tig0023765:19909-19928 | None:intergenic | 35.0% | |
| ATGCAGCAGCTATTTATTTC+CGG | - | tig0023765:20185-20204 | Msa1411400:five_prime_UTR | 35.0% | |
| ! | TGTTTTGCCAACTCAATTTC+CGG | - | tig0023765:20219-20238 | Msa1411400:intron | 35.0% |
| TAATATACAAGCGACAGACT+TGG | + | tig0023765:20263-20282 | None:intergenic | 35.0% | |
| ATCTTCGACGAAGAAGAGAA+GGG | + | tig0023765:14010-14029 | None:intergenic | 40.0% | |
| TTCTCTTCTTCGTCGAAGAT+CGG | - | tig0023765:14010-14029 | Msa1411400:three_prime_UTR | 40.0% | |
| GTAAAGAGGAAGAAGATTGG+AGG | - | tig0023765:14070-14089 | Msa1411400:three_prime_UTR | 40.0% | |
| CCATGAAATCTAGAGGAAGA+AGG | + | tig0023765:14108-14127 | None:intergenic | 40.0% | |
| CCTTCTTCCTCTAGATTTCA+TGG | - | tig0023765:14105-14124 | Msa1411400:three_prime_UTR | 40.0% | |
| TGTTCCTCTGTAGCATCATA+CGG | + | tig0023765:14278-14297 | None:intergenic | 40.0% | |
| TAGAGAAACTGGGAAACCTA+AGG | - | tig0023765:14505-14524 | Msa1411400:intron | 40.0% | |
| AGAGAAACTGGGAAACCTAA+GGG | - | tig0023765:14506-14525 | Msa1411400:intron | 40.0% | |
| GATTTCGCGGAGAATGATAA+AGG | - | tig0023765:14623-14642 | Msa1411400:intron | 40.0% | |
| !!! | CTTTTGGGTTTTGTTAGGAC+TGG | - | tig0023765:14719-14738 | Msa1411400:intron | 40.0% |
| TTTGTTAGGACTGGATGTTG+AGG | - | tig0023765:14728-14747 | Msa1411400:intron | 40.0% | |
| TTGTTAGGACTGGATGTTGA+GGG | - | tig0023765:14729-14748 | Msa1411400:intron | 40.0% | |
| ! | AGAAAAGGGAAGGGTTTTTG+GGG | - | tig0023765:14758-14777 | Msa1411400:intron | 40.0% |
| !! | CTACTGCACTTCTTTTAGGA+GGG | + | tig0023765:14905-14924 | None:intergenic | 40.0% |
| ! | TCTACTGCACTTCTTTTAGG+AGG | + | tig0023765:14906-14925 | None:intergenic | 40.0% |
| ACCCTGAAAGTCATGCATTA+TGG | - | tig0023765:14973-14992 | Msa1411400:intron | 40.0% | |
| CCCATAATGCATGACTTTCA+GGG | + | tig0023765:14977-14996 | None:intergenic | 40.0% | |
| CCCTGAAAGTCATGCATTAT+GGG | - | tig0023765:14974-14993 | Msa1411400:intron | 40.0% | |
| ACCCATAATGCATGACTTTC+AGG | + | tig0023765:14978-14997 | None:intergenic | 40.0% | |
| TGACTTATCATTTGGGCCAT+GGG | + | tig0023765:15031-15050 | None:intergenic | 40.0% | |
| GCCCAAATGATAAGTCACTT+TGG | - | tig0023765:15034-15053 | Msa1411400:intron | 40.0% | |
| CTCCCAAATGGCTCATAATT+TGG | - | tig0023765:15193-15212 | Msa1411400:CDS | 40.0% | |
| !! | TGAAAAAATGGGTTGGAAGG+TGG | + | tig0023765:15499-15518 | None:intergenic | 40.0% |
| !! | GCATGAAAAAATGGGTTGGA+AGG | + | tig0023765:15502-15521 | None:intergenic | 40.0% |
| ACGAGCATGAAAAAATGGGT+TGG | + | tig0023765:15506-15525 | None:intergenic | 40.0% | |
| GACCCTGCAGTAAAAGAAAA+AGG | + | tig0023765:15586-15605 | None:intergenic | 40.0% | |
| AAAGATCCTCAGAAACAAGC+AGG | - | tig0023765:15753-15772 | Msa1411400:intron | 40.0% | |
| TTGGCCAGATGCAAAGTTAA+AGG | + | tig0023765:15948-15967 | None:intergenic | 40.0% | |
| TCAGAGCTTAAGGTAAGTAC+TGG | - | tig0023765:15999-16018 | Msa1411400:intron | 40.0% | |
| CAGAGCTTAAGGTAAGTACT+GGG | - | tig0023765:16000-16019 | Msa1411400:intron | 40.0% | |
| TATACCTGAAAAAGGGCCTT+GGG | + | tig0023765:16153-16172 | None:intergenic | 40.0% | |
| TTATACCTGAAAAAGGGCCT+TGG | + | tig0023765:16154-16173 | None:intergenic | 40.0% | |
| AGAATGAAGGGATATAGCCA+AGG | + | tig0023765:16290-16309 | None:intergenic | 40.0% | |
| TGTGCTTGTGTCAGAATGAA+GGG | + | tig0023765:16302-16321 | None:intergenic | 40.0% | |
| TTGTGCTTGTGTCAGAATGA+AGG | + | tig0023765:16303-16322 | None:intergenic | 40.0% | |
| TGATGTCTAACTGCATGATG+AGG | - | tig0023765:16405-16424 | Msa1411400:CDS | 40.0% | |
| GATGTCTAACTGCATGATGA+GGG | - | tig0023765:16406-16425 | Msa1411400:CDS | 40.0% | |
| ATGTCTAACTGCATGATGAG+GGG | - | tig0023765:16407-16426 | Msa1411400:CDS | 40.0% | |
| ATCTTTCAACCCTATCTGTC+TGG | + | tig0023765:16495-16514 | None:intergenic | 40.0% | |
| TTCAACATCCAGCAAACTCA+CGG | + | tig0023765:16634-16653 | None:intergenic | 40.0% | |
| !! | TCAGACTTGTTAGGCCTTTA+AGG | + | tig0023765:16663-16682 | None:intergenic | 40.0% |
| TCCAACATGCACTTAGGAAT+CGG | + | tig0023765:16913-16932 | None:intergenic | 40.0% | |
| TAATTCCAACTCTCCATGGA+AGG | - | tig0023765:17008-17027 | Msa1411400:intron | 40.0% | |
| AACATTTGGAGATGAGCACA+TGG | + | tig0023765:17070-17089 | None:intergenic | 40.0% | |
| AGGATTTCTATGTTACGCCT+TGG | - | tig0023765:17102-17121 | Msa1411400:intron | 40.0% | |
| TGATCACACACAGTTGTTCT+AGG | - | tig0023765:17155-17174 | Msa1411400:intron | 40.0% | |
| TATGTATGGTTCGCAGCAAT+TGG | - | tig0023765:17181-17200 | Msa1411400:intron | 40.0% | |
| ATGTATGGTTCGCAGCAATT+GGG | - | tig0023765:17182-17201 | Msa1411400:intron | 40.0% | |
| AGCCTGTCACATTATGAGAT+TGG | + | tig0023765:17297-17316 | None:intergenic | 40.0% | |
| !! | CCGAAGCTTTTAACTGAACA+TGG | - | tig0023765:17807-17826 | Msa1411400:intron | 40.0% |
| TTAATGAATGAAGGCCACCT+TGG | - | tig0023765:18008-18027 | Msa1411400:intron | 40.0% | |
| TAGGAACTGAAGGGTTATGA+GGG | + | tig0023765:18145-18164 | None:intergenic | 40.0% | |
| GTCAATTGACTAGGAACTGA+AGG | + | tig0023765:18155-18174 | None:intergenic | 40.0% | |
| !! | CAGAGGAGGCTTTGAATTTA+CGG | + | tig0023765:18177-18196 | None:intergenic | 40.0% |
| !! | TTGCTTTGATGATGTTGAGG+GGG | + | tig0023765:18212-18231 | None:intergenic | 40.0% |
| !! | GTTGCTTTGATGATGTTGAG+GGG | + | tig0023765:18213-18232 | None:intergenic | 40.0% |
| !! | GGTTGCTTTGATGATGTTGA+GGG | + | tig0023765:18214-18233 | None:intergenic | 40.0% |
| !! | TGGTTGCTTTGATGATGTTG+AGG | + | tig0023765:18215-18234 | None:intergenic | 40.0% |
| GAATTTGCCTGTTGAAATGG+AGG | + | tig0023765:18320-18339 | None:intergenic | 40.0% | |
| ! | TACTGGTTGTTGTAGAAACG+AGG | + | tig0023765:18369-18388 | None:intergenic | 40.0% |
| CTACAACAACCAGTACTTGT+TGG | - | tig0023765:18374-18393 | Msa1411400:CDS | 40.0% | |
| AATGCACAAAGCAAGACTGA+TGG | + | tig0023765:18575-18594 | None:intergenic | 40.0% | |
| CAATTCCAATGTGGGTTCTT+AGG | - | tig0023765:18705-18724 | Msa1411400:intron | 40.0% | |
| GGTTCTTAGGAGTTCTTAGA+CGG | - | tig0023765:18718-18737 | Msa1411400:intron | 40.0% | |
| ATTCTACTCTTCTGCTTAGC+TGG | - | tig0023765:18888-18907 | Msa1411400:intron | 40.0% | |
| CTCTACTCCAAAAGATACGT+TGG | + | tig0023765:19089-19108 | None:intergenic | 40.0% | |
| ! | TCACTAGATTGAATGACGGA+AGG | - | tig0023765:19161-19180 | Msa1411400:intron | 40.0% |
| ! | CACTAGATTGAATGACGGAA+GGG | - | tig0023765:19162-19181 | Msa1411400:intron | 40.0% |
| ! | ACTAGATTGAATGACGGAAG+GGG | - | tig0023765:19163-19182 | Msa1411400:intron | 40.0% |
| !! | ACATCTGCTTTAGGAACTAC+AGG | + | tig0023765:19265-19284 | None:intergenic | 40.0% |
| TAGTTCCTAAAGCAGATGTG+CGG | - | tig0023765:19266-19285 | Msa1411400:intron | 40.0% | |
| CTCTGATCAACAATCTTCAC+AGG | - | tig0023765:19291-19310 | Msa1411400:intron | 40.0% | |
| CTTGGCATCTATGAATCATC+AGG | + | tig0023765:19329-19348 | None:intergenic | 40.0% | |
| AAAACAGACTCCACATCAGA+TGG | + | tig0023765:20023-20042 | None:intergenic | 40.0% | |
| CTATTTATTTCCGGCGAATG+TGG | - | tig0023765:20194-20213 | Msa1411400:five_prime_UTR | 40.0% | |
| GTTTCTGTCAAACCATCTTC+CGG | + | tig0023765:20241-20260 | None:intergenic | 40.0% | |
| GATCTTCGACGAAGAAGAGA+AGG | + | tig0023765:14011-14030 | None:intergenic | 45.0% | |
| TTCTTCGTCGAAGATCGGAA+CGG | - | tig0023765:14015-14034 | Msa1411400:three_prime_UTR | 45.0% | |
| ACCAAAGACAGTGCGATGTT+GGG | + | tig0023765:14143-14162 | None:intergenic | 45.0% | |
| TACCAAAGACAGTGCGATGT+TGG | + | tig0023765:14144-14163 | None:intergenic | 45.0% | |
| CATACCGTATGATGCTACAG+AGG | - | tig0023765:14271-14290 | Msa1411400:three_prime_UTR | 45.0% | |
| TGCTACAGAGGAACAGCTTA+AGG | - | tig0023765:14283-14302 | Msa1411400:three_prime_UTR | 45.0% | |
| GCTTAAGGAAATTTGTCGGG+AGG | - | tig0023765:14298-14317 | Msa1411400:three_prime_UTR | 45.0% | |
| AAGGAAATTTGTCGGGAGGT+TGG | - | tig0023765:14302-14321 | Msa1411400:three_prime_UTR | 45.0% | |
| ACTGGGAAACCTAAGGGTTA+CGG | - | tig0023765:14512-14531 | Msa1411400:intron | 45.0% | |
| TCACAGAATCCGTAACCCTT+AGG | + | tig0023765:14524-14543 | None:intergenic | 45.0% | |
| TGTTGAGGGAGGGAAAGAAA+AGG | - | tig0023765:14743-14762 | Msa1411400:intron | 45.0% | |
| GTTGAGGGAGGGAAAGAAAA+GGG | - | tig0023765:14744-14763 | Msa1411400:intron | 45.0% | |
| !!! | GGAAGGGTTTTTGGGGTTAA+GGG | - | tig0023765:14765-14784 | Msa1411400:intron | 45.0% |
| TTAAGGGAGGGAAAGGAGAA+TGG | - | tig0023765:14781-14800 | Msa1411400:intron | 45.0% | |
| ! | TCCCACCTTGTTTGAGTGAA+GGG | - | tig0023765:14818-14837 | Msa1411400:intron | 45.0% |
| AAGTCCCCTTCACTCAAACA+AGG | + | tig0023765:14826-14845 | None:intergenic | 45.0% | |
| GACTTATCATTTGGGCCATG+GGG | + | tig0023765:15030-15049 | None:intergenic | 45.0% | |
| GTGACTTATCATTTGGGCCA+TGG | + | tig0023765:15032-15051 | None:intergenic | 45.0% | |
| ! | TGGCTCATAATTTGGGATGG+AGG | - | tig0023765:15201-15220 | Msa1411400:CDS | 45.0% |
| ! | TTTCTTTTACTGCAGGGTCG+CGG | - | tig0023765:15587-15606 | Msa1411400:intron | 45.0% |
| !! | CCTGCATTTGTTGTCATTCC+TGG | + | tig0023765:15617-15636 | None:intergenic | 45.0% |
| CCAGGAATGACAACAAATGC+AGG | - | tig0023765:15614-15633 | Msa1411400:intron | 45.0% | |
| TTGATGTTGAGCTGCTTGAG+CGG | + | tig0023765:15802-15821 | None:intergenic | 45.0% | |
| AGCAGCTCAACATCAACCTA+TGG | - | tig0023765:15806-15825 | Msa1411400:intron | 45.0% | |
| GCAGCTCAACATCAACCTAT+GGG | - | tig0023765:15807-15826 | Msa1411400:intron | 45.0% | |
| ACGGCAATATGAAGACCCAT+AGG | + | tig0023765:15825-15844 | None:intergenic | 45.0% | |
| CATGACAGTTGCAGCTGTTA+CGG | + | tig0023765:15844-15863 | None:intergenic | 45.0% | |
| GGCATCCCGTCAAATCAAAA+TGG | - | tig0023765:15891-15910 | Msa1411400:intron | 45.0% | |
| !! | TAGCTGACTCCTGGACATTT+TGG | + | tig0023765:15967-15986 | None:intergenic | 45.0% |
| ! | TATCTCAGATAGCTGACTCC+TGG | + | tig0023765:15976-15995 | None:intergenic | 45.0% |
| GTTGTTATGATGGCAGGGAA+TGG | - | tig0023765:16074-16093 | Msa1411400:CDS | 45.0% | |
| GTGCTTGCATACATGCACAA+AGG | + | tig0023765:16205-16224 | None:intergenic | 45.0% | |
| TGTCTAACTGCATGATGAGG+GGG | - | tig0023765:16408-16427 | Msa1411400:CDS | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0023765:16830-16849 | Msa1411400:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0023765:16831-16850 | Msa1411400:intron | 45.0% |
| !! | ACTACAAGTCTCTAAGGCCA+AGG | + | tig0023765:17122-17141 | None:intergenic | 45.0% |
| ! | TGGCCTTAGAGACTTGTAGT+AGG | - | tig0023765:17122-17141 | Msa1411400:intron | 45.0% |
| TGTATGGTTCGCAGCAATTG+GGG | - | tig0023765:17183-17202 | Msa1411400:intron | 45.0% | |
| TTGCAGGCTCAGATAATGCT+AGG | - | tig0023765:17664-17683 | Msa1411400:intron | 45.0% | |
| TGCAGGCTCAGATAATGCTA+GGG | - | tig0023765:17665-17684 | Msa1411400:intron | 45.0% | |
| ! | ATGTTTGCTGAGTCTGACCA+AGG | + | tig0023765:18028-18047 | None:intergenic | 45.0% |
| TGGTCAGACTCAGCAAACAT+TGG | - | tig0023765:18028-18047 | Msa1411400:intron | 45.0% | |
| ! | AACTTGCTCTGTCCATAAGG+AGG | + | tig0023765:18074-18093 | None:intergenic | 45.0% |
| ! | TGCAACTTGCTCTGTCCATA+AGG | + | tig0023765:18077-18096 | None:intergenic | 45.0% |
| CTAGGAACTGAAGGGTTATG+AGG | + | tig0023765:18146-18165 | None:intergenic | 45.0% | |
| TGATGTTGAGGGGGAATTCT+GGG | + | tig0023765:18203-18222 | None:intergenic | 45.0% | |
| ATGATGTTGAGGGGGAATTC+TGG | + | tig0023765:18204-18223 | None:intergenic | 45.0% | |
| ! | AGCAACCATTTTGTACAGCC+TGG | - | tig0023765:18227-18246 | Msa1411400:intron | 45.0% |
| ! | ATTTTGTACAGCCTGGAGCA+GGG | - | tig0023765:18234-18253 | Msa1411400:intron | 45.0% |
| CTGTTGAAATGGAGGCCTAA+CGG | + | tig0023765:18312-18331 | None:intergenic | 45.0% | |
| TGTTGTAGAAACGAGGCATG+CGG | + | tig0023765:18362-18381 | None:intergenic | 45.0% | |
| GTTGAGCTTCCAACAAGTAC+TGG | + | tig0023765:18386-18405 | None:intergenic | 45.0% | |
| TTCCTTCTCCATACAAACCG+CGG | + | tig0023765:18613-18632 | None:intergenic | 45.0% | |
| GAACTCCTAAGAACCCACAT+TGG | + | tig0023765:18713-18732 | None:intergenic | 45.0% | |
| ! | CACCATTAGAGTACTCTGCA+TGG | - | tig0023765:18743-18762 | Msa1411400:intron | 45.0% |
| ! | TGCCATGCAGAGTACTCTAA+TGG | + | tig0023765:18748-18767 | None:intergenic | 45.0% |
| AGTACTCTGCATGGCATTCA+GGG | - | tig0023765:18752-18771 | Msa1411400:intron | 45.0% | |
| TGGCATTCAGGGTGGAAAAT+AGG | - | tig0023765:18763-18782 | Msa1411400:intron | 45.0% | |
| TTCCAACGCTCTTGAGGATT+GGG | - | tig0023765:19042-19061 | Msa1411400:intron | 45.0% | |
| TGGAGTAGAGAATACAGGCA+TGG | - | tig0023765:19099-19118 | Msa1411400:intron | 45.0% | |
| GATGGTCGTGTAAAGGATTC+TGG | + | tig0023765:19136-19155 | None:intergenic | 45.0% | |
| ! | GAGCTTTGATGGTCGTGTAA+AGG | + | tig0023765:19143-19162 | None:intergenic | 45.0% |
| TCAGACGTACCTGTTTCCAA+CGG | - | tig0023765:19202-19221 | Msa1411400:intron | 45.0% | |
| AACGGATCATCCCATGTTCT+CGG | - | tig0023765:19220-19239 | Msa1411400:intron | 45.0% | |
| TGAGCTACTTCCGAGAACAT+GGG | + | tig0023765:19233-19252 | None:intergenic | 45.0% | |
| ATGAGCTACTTCCGAGAACA+TGG | + | tig0023765:19234-19253 | None:intergenic | 45.0% | |
| !! | GCTTTAGGAACTACAGGTAC+AGG | + | tig0023765:19259-19278 | None:intergenic | 45.0% |
| GGTGGCAATAAGTGTATGAG+TGG | - | tig0023765:19463-19482 | Msa1411400:intron | 45.0% | |
| GGATCCAAATCCGTTGAATG+AGG | - | tig0023765:19788-19807 | Msa1411400:intron | 45.0% | |
| ! | CTCTCCTCATTCAACGGATT+TGG | + | tig0023765:19795-19814 | None:intergenic | 45.0% |
| TGGGGAATAGGAGGATTGAA+CGG | - | tig0023765:19825-19844 | Msa1411400:five_prime_UTR | 45.0% | |
| ATCAGGAATCGCTCGTTACA+TGG | + | tig0023765:19957-19976 | None:intergenic | 45.0% | |
| ATTGCAGCTTCCATCTGATG+TGG | - | tig0023765:20010-20029 | Msa1411400:intron | 45.0% | |
| GGCAAAGAACTCAATTGCTC+TGG | + | tig0023765:20071-20090 | None:intergenic | 45.0% | |
| ATGCAGCACTCATAACACAC+TGG | - | tig0023765:20146-20165 | Msa1411400:five_prime_UTR | 45.0% | |
| CCATCTTCCGGAAATTGAGT+TGG | + | tig0023765:20229-20248 | None:intergenic | 45.0% | |
| CCAACTCAATTTCCGGAAGA+TGG | - | tig0023765:20226-20245 | Msa1411400:intron | 45.0% | |
| TGATCTCGTACACGCTCATT+TGG | + | tig0023765:20411-20430 | None:intergenic | 45.0% | |
| !! | AAATGTAAATATTTATTTAA+TGG | + | tig0023765:17636-17655 | None:intergenic | 5.0% |
| !!! | AAAAAAAAATTCTTAAATTT+TGG | + | tig0023765:18813-18832 | None:intergenic | 5.0% |
| !! | TATTATTATTATTATTCTTA+TGG | + | tig0023765:20458-20477 | None:intergenic | 5.0% |
| !! | GGTGGTGGAACAAACGCTTA+TGG | - | tig0023765:14045-14064 | Msa1411400:three_prime_UTR | 50.0% |
| GGAGCAGCCATGAAATCTAG+AGG | + | tig0023765:14115-14134 | None:intergenic | 50.0% | |
| TCCCAACATCGCACTGTCTT+TGG | - | tig0023765:14139-14158 | Msa1411400:three_prime_UTR | 50.0% | |
| AAGTGCTCGCAGGAATCTTC+AGG | - | tig0023765:14568-14587 | Msa1411400:intron | 50.0% | |
| AGTGCTCGCAGGAATCTTCA+GGG | - | tig0023765:14569-14588 | Msa1411400:intron | 50.0% | |
| TTAGGACTGGATGTTGAGGG+AGG | - | tig0023765:14732-14751 | Msa1411400:intron | 50.0% | |
| TAGGACTGGATGTTGAGGGA+GGG | - | tig0023765:14733-14752 | Msa1411400:intron | 50.0% | |
| AGGGAGGGAAAGAAAAGGGA+AGG | - | tig0023765:14748-14767 | Msa1411400:intron | 50.0% | |
| GGGAGGGAAAGAAAAGGGAA+GGG | - | tig0023765:14749-14768 | Msa1411400:intron | 50.0% | |
| !!! | GGGAAGGGTTTTTGGGGTTA+AGG | - | tig0023765:14764-14783 | Msa1411400:intron | 50.0% |
| !!! | AGGGTTTTTGGGGTTAAGGG+AGG | - | tig0023765:14768-14787 | Msa1411400:intron | 50.0% |
| !!! | GGGTTTTTGGGGTTAAGGGA+GGG | - | tig0023765:14769-14788 | Msa1411400:intron | 50.0% |
| ! | TTTGGGGTTAAGGGAGGGAA+AGG | - | tig0023765:14774-14793 | Msa1411400:intron | 50.0% |
| ! | CTCCCACCTTGTTTGAGTGA+AGG | - | tig0023765:14817-14836 | Msa1411400:intron | 50.0% |
| CCCCTTCACTCAAACAAGGT+GGG | + | tig0023765:14822-14841 | None:intergenic | 50.0% | |
| ! | CCCACCTTGTTTGAGTGAAG+GGG | - | tig0023765:14819-14838 | Msa1411400:intron | 50.0% |
| TCCCCTTCACTCAAACAAGG+TGG | + | tig0023765:14823-14842 | None:intergenic | 50.0% | |
| ! | TTCTTTTACTGCAGGGTCGC+GGG | - | tig0023765:15588-15607 | Msa1411400:intron | 50.0% |
| ACTGTCATGACTGCAGCTCT+AGG | - | tig0023765:15855-15874 | Msa1411400:intron | 50.0% | |
| TGCATCTGGCCAAAATGTCC+AGG | - | tig0023765:15955-15974 | Msa1411400:intron | 50.0% | |
| GGGAATGGCTACACACAACA+AGG | - | tig0023765:16089-16108 | Msa1411400:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | tig0023765:16832-16851 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0023765:16829-16848 | Msa1411400:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | tig0023765:16835-16854 | Msa1411400:intron | 50.0% | |
| ! | GCCGATTCCTAAGTGCATGT+TGG | - | tig0023765:16909-16928 | Msa1411400:intron | 50.0% |
| TTCCAACTCTCCATGGAAGG+TGG | - | tig0023765:17011-17030 | Msa1411400:intron | 50.0% | |
| TTCCACCTTCCATGGAGAGT+TGG | + | tig0023765:17016-17035 | None:intergenic | 50.0% | |
| ATTGGGAGTTCCACCTTCCA+TGG | + | tig0023765:17024-17043 | None:intergenic | 50.0% | |
| AGCACATGGCTGTCAAGAGA+TGG | + | tig0023765:17056-17075 | None:intergenic | 50.0% | |
| GGCTCAGATAATGCTAGGGA+TGG | - | tig0023765:17669-17688 | Msa1411400:intron | 50.0% | |
| AGGGATGGTCAACCCTCAAA+TGG | - | tig0023765:17684-17703 | Msa1411400:intron | 50.0% | |
| TTTGCTGAGTCTGACCAAGG+TGG | + | tig0023765:18025-18044 | None:intergenic | 50.0% | |
| !! | GCAAACATTGGTTCCGACTG+TGG | - | tig0023765:18040-18059 | Msa1411400:intron | 50.0% |
| GGACAGAGCAAGTTGCAGTT+TGG | - | tig0023765:18080-18099 | Msa1411400:intron | 50.0% | |
| !! | TATGAGGGAGAGTGCTGACT+TGG | + | tig0023765:18130-18149 | None:intergenic | 50.0% |
| CTGCTCCAGGCTGTACAAAA+TGG | + | tig0023765:18235-18254 | None:intergenic | 50.0% | |
| ! | CATTTTGTACAGCCTGGAGC+AGG | - | tig0023765:18233-18252 | Msa1411400:intron | 50.0% |
| AAATTACTCTGCCCTGCTCC+AGG | + | tig0023765:18248-18267 | None:intergenic | 50.0% | |
| TTCCATACGTCCCCCAACTA+CGG | - | tig0023765:18277-18296 | Msa1411400:intron | 50.0% | |
| GAAAAACTGCCCGTAGTTGG+GGG | + | tig0023765:18290-18309 | None:intergenic | 50.0% | |
| GGAAAAACTGCCCGTAGTTG+GGG | + | tig0023765:18291-18310 | None:intergenic | 50.0% | |
| CGGAAAAACTGCCCGTAGTT+GGG | + | tig0023765:18292-18311 | None:intergenic | 50.0% | |
| ACGGAAAAACTGCCCGTAGT+TGG | + | tig0023765:18293-18312 | None:intergenic | 50.0% | |
| ! | CTACGGGCAGTTTTTCCGTT+AGG | - | tig0023765:18294-18313 | Msa1411400:intron | 50.0% |
| CGTTAGGCCTCCATTTCAAC+AGG | - | tig0023765:18310-18329 | Msa1411400:intron | 50.0% | |
| TCGTCCAGATGCAAGCTTTC+AGG | - | tig0023765:18430-18449 | Msa1411400:intron | 50.0% | |
| AACCGCGGTTTGTATGGAGA+AGG | - | tig0023765:18608-18627 | Msa1411400:CDS | 50.0% | |
| GAGTACTCTGCATGGCATTC+AGG | - | tig0023765:18751-18770 | Msa1411400:intron | 50.0% | |
| AAACACCAGATGGCATGGAG+GGG | + | tig0023765:18991-19010 | None:intergenic | 50.0% | |
| GAAACACCAGATGGCATGGA+GGG | + | tig0023765:18992-19011 | None:intergenic | 50.0% | |
| AGAAACACCAGATGGCATGG+AGG | + | tig0023765:18993-19012 | None:intergenic | 50.0% | |
| CTGAGAAACACCAGATGGCA+TGG | + | tig0023765:18996-19015 | None:intergenic | 50.0% | |
| TAGACCTTCCAACGCTCTTG+AGG | - | tig0023765:19036-19055 | Msa1411400:intron | 50.0% | |
| !! | CAATCCTCAAGAGCGTTGGA+AGG | + | tig0023765:19043-19062 | None:intergenic | 50.0% |
| CTTCCAACGCTCTTGAGGAT+TGG | - | tig0023765:19041-19060 | Msa1411400:intron | 50.0% | |
| TGGGATGATCCGTTGGAAAC+AGG | + | tig0023765:19214-19233 | None:intergenic | 50.0% | |
| GAGAACATGGGATGATCCGT+TGG | + | tig0023765:19221-19240 | None:intergenic | 50.0% | |
| GGAATAGGAGGATTGAACGG+TGG | - | tig0023765:19828-19847 | Msa1411400:five_prime_UTR | 50.0% | |
| ATGACCTGTTGTTGCTGCTC+TGG | + | tig0023765:20095-20114 | None:intergenic | 50.0% | |
| GATCTCGCTTAAGCGCTTGT+TGG | + | tig0023765:20124-20143 | None:intergenic | 50.0% | |
| GCAAAACAGACCACATTCGC+CGG | + | tig0023765:20207-20226 | None:intergenic | 50.0% | |
| GAAGATCGGAACGGAGAGTG+TGG | - | tig0023765:14024-14043 | Msa1411400:three_prime_UTR | 55.0% | |
| ACAGTGCGATGTTGGGACTG+AGG | + | tig0023765:14136-14155 | None:intergenic | 55.0% | |
| AAACGGCGTTAAGTGCTCGC+AGG | - | tig0023765:14558-14577 | Msa1411400:intron | 55.0% | |
| GGAGGGAAAGGAGAATGGCT+GGG | - | tig0023765:14786-14805 | Msa1411400:intron | 55.0% | |
| ! | TCTTTTACTGCAGGGTCGCG+GGG | - | tig0023765:15589-15608 | Msa1411400:intron | 55.0% |
| !! | GGGATGCCTGCTTGTTTCTG+AGG | + | tig0023765:15762-15781 | None:intergenic | 55.0% |
| CAGGCATCCCAGCTGTTCAA+GGG | - | tig0023765:15772-15791 | Msa1411400:intron | 55.0% | |
| AGGCATCCCAGCTGTTCAAG+GGG | - | tig0023765:15773-15792 | Msa1411400:intron | 55.0% | |
| CGGATTCCCCTTGAACAGCT+GGG | + | tig0023765:15782-15801 | None:intergenic | 55.0% | |
| !! | GTCATGACTGCAGCTCTAGG+TGG | - | tig0023765:15858-15877 | Msa1411400:intron | 55.0% |
| AAAGCAACAGCTGGCGAGAC+AGG | + | tig0023765:16116-16135 | None:intergenic | 55.0% | |
| !! | CTCGCCAGCTGTTGCTTTCA+AGG | - | tig0023765:16118-16137 | Msa1411400:CDS | 55.0% |
| ! | GTGGCCTTGAAAGCAACAGC+TGG | + | tig0023765:16125-16144 | None:intergenic | 55.0% |
| TTCAAGGCCACAGTTGCCCA+AGG | - | tig0023765:16134-16153 | Msa1411400:CDS | 55.0% | |
| AAAAGGGCCTTGGGCAACTG+TGG | + | tig0023765:16144-16163 | None:intergenic | 55.0% | |
| ! | GTTGCCCAAGGCCCTTTTTC+AGG | - | tig0023765:16146-16165 | Msa1411400:CDS | 55.0% |
| GCGATGATCCGTGAGTTTGC+TGG | - | tig0023765:16623-16642 | Msa1411400:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | tig0023765:16837-16856 | None:intergenic | 55.0% | |
| AGAAGCCGACCCCACTTAGT+GGG | + | tig0023765:16843-16862 | None:intergenic | 55.0% | |
| !! | ACATTGGTTCCGACTGTGGC+TGG | - | tig0023765:18044-18063 | Msa1411400:intron | 55.0% |
| !! | GTGGCTGGTCTACCTCCTTA+TGG | - | tig0023765:18059-18078 | Msa1411400:intron | 55.0% |
| GTAGTTGGGGGACGTATGGA+AGG | + | tig0023765:18278-18297 | None:intergenic | 55.0% | |
| TCCATACGTCCCCCAACTAC+GGG | - | tig0023765:18278-18297 | Msa1411400:intron | 55.0% | |
| GGCACCTGAAAGCTTGCATC+TGG | + | tig0023765:18437-18456 | None:intergenic | 55.0% | |
| ACTCTGCATGGCATTCAGGG+TGG | - | tig0023765:18755-18774 | Msa1411400:intron | 55.0% | |
| ! | GAGTGCCGCACATCTGCTTT+AGG | + | tig0023765:19274-19293 | None:intergenic | 55.0% |
| ACCTGTTGTTGCTGCTCTGG+TGG | + | tig0023765:20092-20111 | None:intergenic | 55.0% | |
| ! | GATCGGAACGGAGAGTGTGG+TGG | - | tig0023765:14027-14046 | Msa1411400:three_prime_UTR | 60.0% |
| GGGAGGGAAAGGAGAATGGC+TGG | - | tig0023765:14785-14804 | Msa1411400:intron | 60.0% | |
| GGGAAAGGAGAATGGCTGGG+AGG | - | tig0023765:14789-14808 | Msa1411400:intron | 60.0% | |
| ! | CTTTTACTGCAGGGTCGCGG+GGG | - | tig0023765:15590-15609 | Msa1411400:intron | 60.0% |
| GCAGGCATCCCAGCTGTTCA+AGG | - | tig0023765:15771-15790 | Msa1411400:intron | 60.0% | |
| GCGGATTCCCCTTGAACAGC+TGG | + | tig0023765:15783-15802 | None:intergenic | 60.0% | |
| ! | GCTCTAGGTGGTGCTCAGAC+TGG | - | tig0023765:15870-15889 | Msa1411400:intron | 60.0% |
| GAGAAGCCGACCCCACTTAG+TGG | + | tig0023765:16844-16863 | None:intergenic | 60.0% | |
| GGAGGTAGACCAGCCACAGT+CGG | + | tig0023765:18056-18075 | None:intergenic | 60.0% | |
| GGAATTCTGGGCTGCAGAGG+AGG | + | tig0023765:18191-18210 | None:intergenic | 60.0% | |
| GAAACGAGGCATGCGGTTGC+TGG | + | tig0023765:18355-18374 | None:intergenic | 60.0% | |
| ! | GGCCCAATCCTCAAGAGCGT+TGG | + | tig0023765:19047-19066 | None:intergenic | 60.0% |
| ACGGAAGGGGTCTCTCTGCT+GGG | - | tig0023765:19176-19195 | Msa1411400:intron | 60.0% | |
| GCCACCAGAGCAGCAACAAC+AGG | - | tig0023765:20088-20107 | Msa1411400:intron | 60.0% | |
| ! | CGGAACGGAGAGTGTGGTGG+TGG | - | tig0023765:14030-14049 | Msa1411400:three_prime_UTR | 65.0% |
| GGGGGAATTCTGGGCTGCAG+AGG | + | tig0023765:18194-18213 | None:intergenic | 65.0% | |
| GCCCGTAGTTGGGGGACGTA+TGG | + | tig0023765:18282-18301 | None:intergenic | 65.0% | |
| GACGGAAGGGGTCTCTCTGC+TGG | - | tig0023765:19175-19194 | Msa1411400:intron | 65.0% | |
| GCTGGCCCCTCCATGCCATC+TGG | - | tig0023765:18983-19002 | Msa1411400:intron | 70.0% | |
| ! | CTGCAGGGTCGCGGGGGACC+AGG | - | tig0023765:15596-15615 | Msa1411400:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023765 | gene | 13984 | 20501 | 13984 | ID=Msa1411400;Name=Msa1411400 |
| tig0023765 | mRNA | 13984 | 20501 | 13984 | ID=Msa1411400-mRNA-1;Parent=Msa1411400;Name=Msa1411400-mRNA-1;_AED=0.09;_eAED=0.09;_QI=459|0.63|0.58|1|0.63|0.66|12|341|421 |
| tig0023765 | exon | 13984 | 14468 | 13984 | ID=Msa1411400-mRNA-1:exon:20127;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 15173 | 15378 | 15173 | ID=Msa1411400-mRNA-1:exon:20126;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 15409 | 15502 | 15409 | ID=Msa1411400-mRNA-1:exon:20125;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 16058 | 16297 | 16058 | ID=Msa1411400-mRNA-1:exon:20124;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 16310 | 16525 | 16310 | ID=Msa1411400-mRNA-1:exon:20123;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 16780 | 16815 | 16780 | ID=Msa1411400-mRNA-1:exon:20122;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 18318 | 18395 | 18318 | ID=Msa1411400-mRNA-1:exon:20121;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 18475 | 18720 | 18475 | ID=Msa1411400-mRNA-1:exon:20120;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 18850 | 18883 | 18850 | ID=Msa1411400-mRNA-1:exon:20119;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 19818 | 19992 | 19818 | ID=Msa1411400-mRNA-1:exon:20118;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 20143 | 20221 | 20143 | ID=Msa1411400-mRNA-1:exon:20117;Parent=Msa1411400-mRNA-1 |
| tig0023765 | exon | 20325 | 20501 | 20325 | ID=Msa1411400-mRNA-1:exon:20116;Parent=Msa1411400-mRNA-1 |
| tig0023765 | five_prime_UTR | 20325 | 20501 | 20325 | ID=Msa1411400-mRNA-1:five_prime_utr;Parent=Msa1411400-mRNA-1 |
| tig0023765 | five_prime_UTR | 20143 | 20221 | 20143 | ID=Msa1411400-mRNA-1:five_prime_utr;Parent=Msa1411400-mRNA-1 |
| tig0023765 | five_prime_UTR | 19818 | 19992 | 19818 | ID=Msa1411400-mRNA-1:five_prime_utr;Parent=Msa1411400-mRNA-1 |
| tig0023765 | five_prime_UTR | 18856 | 18883 | 18856 | ID=Msa1411400-mRNA-1:five_prime_utr;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 18850 | 18855 | 18850 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 18475 | 18720 | 18475 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 18318 | 18395 | 18318 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 16780 | 16815 | 16780 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 16310 | 16525 | 16310 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 16058 | 16297 | 16058 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 15409 | 15502 | 15409 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 15173 | 15378 | 15173 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | CDS | 14325 | 14468 | 14325 | ID=Msa1411400-mRNA-1:cds;Parent=Msa1411400-mRNA-1 |
| tig0023765 | three_prime_UTR | 13984 | 14324 | 13984 | ID=Msa1411400-mRNA-1:three_prime_utr;Parent=Msa1411400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
