Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400610 | XP_013457744.2 | 88.978 | 871 | 56 | 4 | 1 | 835 | 1 | 867 | 0.0 | 1518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400610 | sp|M1BJF6|JOKA2_SOLTU | 41.485 | 916 | 398 | 26 | 1 | 835 | 3 | 861 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400610 | A0A396ID03 | 88.978 | 871 | 56 | 4 | 1 | 835 | 1 | 867 | 0.0 | 1518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa1400610 | 0.810762 | 9.812403e-51 | -8.615850e-47 |
| Msa0016670 | Msa1400610 | -0.834799 | 2.432156e-56 | -8.615850e-47 |
| Msa0021810 | Msa1400610 | -0.800783 | 1.225410e-48 | -8.615850e-47 |
| Msa0032260 | Msa1400610 | -0.800413 | 1.458303e-48 | -8.615850e-47 |
| Msa0032840 | Msa1400610 | 0.850528 | 1.602402e-60 | -8.615850e-47 |
| Msa0040690 | Msa1400610 | -0.825570 | 4.361277e-54 | -8.615850e-47 |
| Msa0041620 | Msa1400610 | -0.807375 | 5.212664e-50 | -8.615850e-47 |
| Msa0049650 | Msa1400610 | 0.816332 | 5.840013e-52 | -8.615850e-47 |
| Msa0052610 | Msa1400610 | -0.810437 | 1.153445e-50 | -8.615850e-47 |
| Msa0053570 | Msa1400610 | -0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0074320 | Msa1400610 | -0.813406 | 2.600773e-51 | -8.615850e-47 |
| Msa0074950 | Msa1400610 | 0.837612 | 4.690707e-57 | -8.615850e-47 |
| Msa0085360 | Msa1400610 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa0094580 | Msa1400610 | -0.804303 | 2.304907e-49 | -8.615850e-47 |
| Msa0097850 | Msa1400610 | -0.811049 | 8.500842e-51 | -8.615850e-47 |
| Msa0099190 | Msa1400610 | -0.820342 | 7.214814e-53 | -8.615850e-47 |
| Msa0114540 | Msa1400610 | 0.831005 | 2.133042e-55 | -8.615850e-47 |
| Msa1360980 | Msa1400610 | -0.802571 | 5.266124e-49 | -8.615850e-47 |
| Msa1363330 | Msa1400610 | -0.812706 | 3.704065e-51 | -8.615850e-47 |
| Msa1364470 | Msa1400610 | 0.819443 | 1.158356e-52 | -8.615850e-47 |
| Msa1374120 | Msa1400610 | -0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa1376090 | Msa1400610 | 0.871178 | 8.330962e-67 | -8.615850e-47 |
| Msa1377540 | Msa1400610 | 0.852548 | 4.295307e-61 | -8.615850e-47 |
| Msa1386600 | Msa1400610 | -0.814015 | 1.910628e-51 | -8.615850e-47 |
| Msa1386710 | Msa1400610 | -0.806821 | 6.827649e-50 | -8.615850e-47 |
| Msa1400610 | Msa1403930 | 0.832580 | 8.715023e-56 | -8.615850e-47 |
| Msa1400610 | Msa1410430 | 0.809939 | 1.476539e-50 | -8.615850e-47 |
| Msa1400610 | Msa1410760 | 0.823519 | 1.326276e-53 | -8.615850e-47 |
| Msa1400610 | Msa1411400 | 0.811488 | 6.827109e-51 | -8.615850e-47 |
| Msa1400610 | Msa1421700 | -0.804887 | 1.741173e-49 | -8.615850e-47 |
| Msa1400610 | Msa1429360 | 0.838511 | 2.753363e-57 | -8.615850e-47 |
| Msa1400610 | Msa1433890 | 0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa1400610 | Msa1447110 | -0.809416 | 1.913017e-50 | -8.615850e-47 |
| Msa1400610 | Msa1449910 | -0.811400 | 7.135505e-51 | -8.615850e-47 |
| Msa1400610 | Msa1461490 | -0.810985 | 8.780162e-51 | -8.615850e-47 |
| Msa1400610 | Msa1465680 | -0.806971 | 6.347411e-50 | -8.615850e-47 |
| Msa0615440 | Msa1400610 | -0.814734 | 1.324968e-51 | -8.615850e-47 |
| Msa0619470 | Msa1400610 | -0.818963 | 1.489684e-52 | -8.615850e-47 |
| Msa0619510 | Msa1400610 | -0.811506 | 6.767554e-51 | -8.615850e-47 |
| Msa0661190 | Msa1400610 | 0.812211 | 4.751581e-51 | -8.615850e-47 |
| Msa0679700 | Msa1400610 | -0.827378 | 1.617033e-54 | -8.615850e-47 |
| Msa0692080 | Msa1400610 | -0.803944 | 2.737733e-49 | -8.615850e-47 |
| Msa0698490 | Msa1400610 | -0.813195 | 2.894540e-51 | -8.615850e-47 |
| Msa0698660 | Msa1400610 | -0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0702340 | Msa1400610 | -0.812466 | 4.181044e-51 | -8.615850e-47 |
| Msa0702590 | Msa1400610 | -0.803688 | 3.093038e-49 | -8.615850e-47 |
| Msa0702660 | Msa1400610 | -0.812452 | 4.210291e-51 | -8.615850e-47 |
| Msa0704660 | Msa1400610 | -0.800086 | 1.699339e-48 | -8.615850e-47 |
| Msa0715010 | Msa1400610 | 0.807501 | 4.901841e-50 | -8.615850e-47 |
| Msa0750920 | Msa1400610 | -0.811156 | 8.061234e-51 | -8.615850e-47 |
| Msa0754720 | Msa1400610 | 0.804165 | 2.462891e-49 | -8.615850e-47 |
| Msa0756630 | Msa1400610 | 0.811139 | 8.127395e-51 | -8.615850e-47 |
| Msa0760380 | Msa1400610 | -0.828784 | 7.417221e-55 | -8.615850e-47 |
| Msa0836660 | Msa1400610 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0125770 | Msa1400610 | -0.837380 | 5.378678e-57 | -8.615850e-47 |
| Msa0136070 | Msa1400610 | -0.812038 | 5.183179e-51 | -8.615850e-47 |
| Msa0136100 | Msa1400610 | -0.815289 | 9.975680e-52 | -8.615850e-47 |
| Msa0138970 | Msa1400610 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0143240 | Msa1400610 | 0.806822 | 6.825243e-50 | -8.615850e-47 |
| Msa0147000 | Msa1400610 | 0.814041 | 1.885132e-51 | -8.615850e-47 |
| Msa0156650 | Msa1400610 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
| Msa0177700 | Msa1400610 | 0.809772 | 1.604298e-50 | -8.615850e-47 |
| Msa0187690 | Msa1400610 | -0.807655 | 4.546278e-50 | -8.615850e-47 |
| Msa0197520 | Msa1400610 | -0.809336 | 1.989856e-50 | -8.615850e-47 |
| Msa0219250 | Msa1400610 | 0.824939 | 6.149469e-54 | -8.615850e-47 |
| Msa0222920 | Msa1400610 | -0.855048 | 8.193174e-62 | -8.615850e-47 |
| Msa0225740 | Msa1400610 | -0.800655 | 1.301845e-48 | -8.615850e-47 |
| Msa0227400 | Msa1400610 | -0.805141 | 1.540717e-49 | -8.615850e-47 |
| Msa0229130 | Msa1400610 | -0.811026 | 8.599391e-51 | -8.615850e-47 |
| Msa0230550 | Msa1400610 | 0.847966 | 8.275708e-60 | -8.615850e-47 |
| Msa1224840 | Msa1400610 | -0.809361 | 1.965500e-50 | -8.615850e-47 |
| Msa1245940 | Msa1400610 | 0.991785 | 1.586843e-189 | -8.615850e-47 |
| Msa1246530 | Msa1400610 | 0.826451 | 2.694066e-54 | -8.615850e-47 |
| Msa1249200 | Msa1400610 | 0.806495 | 8.003133e-50 | -8.615850e-47 |
| Msa1253930 | Msa1400610 | 0.816637 | 4.990796e-52 | -8.615850e-47 |
| Msa1254370 | Msa1400610 | 0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa1256850 | Msa1400610 | -0.800232 | 1.587644e-48 | -8.615850e-47 |
| Msa1259070 | Msa1400610 | 0.990685 | 8.008138e-184 | -8.615850e-47 |
| Msa1269580 | Msa1400610 | 0.841664 | 4.143814e-58 | -8.615850e-47 |
| Msa1294610 | Msa1400610 | 0.823270 | 1.515733e-53 | -8.615850e-47 |
| Msa1307660 | Msa1400610 | 0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa1317810 | Msa1400610 | 0.819598 | 1.067831e-52 | -8.615850e-47 |
| Msa1332870 | Msa1400610 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0367470 | Msa1400610 | -0.822733 | 2.022762e-53 | -8.615850e-47 |
| Msa0369050 | Msa1400610 | -0.819030 | 1.438520e-52 | -8.615850e-47 |
| Msa0370160 | Msa1400610 | 0.827928 | 1.193088e-54 | -8.615850e-47 |
| Msa0386920 | Msa1400610 | -0.827417 | 1.583028e-54 | -8.615850e-47 |
| Msa0414950 | Msa1400610 | 0.839592 | 1.445237e-57 | -8.615850e-47 |
| Msa0415130 | Msa1400610 | -0.810232 | 1.276561e-50 | -8.615850e-47 |
| Msa0416400 | Msa1400610 | -0.805974 | 1.029954e-49 | -8.615850e-47 |
| Msa0417610 | Msa1400610 | 0.806178 | 9.330035e-50 | -8.615850e-47 |
| Msa0421780 | Msa1400610 | 0.839588 | 1.448509e-57 | -8.615850e-47 |
| Msa0428240 | Msa1400610 | -0.813324 | 2.711112e-51 | -8.615850e-47 |
| Msa0436280 | Msa1400610 | 0.841490 | 4.604829e-58 | -8.615850e-47 |
| Msa0437510 | Msa1400610 | -0.813297 | 2.748228e-51 | -8.615850e-47 |
| Msa0437690 | Msa1400610 | 0.842685 | 2.223528e-58 | -8.615850e-47 |
| Msa0459770 | Msa1400610 | 0.802750 | 4.837189e-49 | -8.615850e-47 |
| Msa0460020 | Msa1400610 | -0.832241 | 1.057935e-55 | -8.615850e-47 |
| Msa0467900 | Msa1400610 | 0.818806 | 1.617587e-52 | -8.615850e-47 |
| Msa0467960 | Msa1400610 | 0.829509 | 4.948269e-55 | -8.615850e-47 |
| Msa0469910 | Msa1400610 | 0.826771 | 2.259932e-54 | -8.615850e-47 |
| Msa0474590 | Msa1400610 | -0.828817 | 7.279729e-55 | -8.615850e-47 |
| Msa1004900 | Msa1400610 | 0.821104 | 4.820541e-53 | -8.615850e-47 |
| Msa1022970 | Msa1400610 | -0.811682 | 6.195475e-51 | -8.615850e-47 |
| Msa1041520 | Msa1400610 | -0.810669 | 1.027472e-50 | -8.615850e-47 |
| Msa1061720 | Msa1400610 | -0.821486 | 3.936633e-53 | -8.615850e-47 |
| Msa1069660 | Msa1400610 | 0.832278 | 1.035520e-55 | -8.615850e-47 |
| Msa1076810 | Msa1400610 | 0.815439 | 9.238966e-52 | -8.615850e-47 |
| Msa1079370 | Msa1400610 | 0.840626 | 7.764876e-58 | -8.615850e-47 |
| Msa1081560 | Msa1400610 | -0.802466 | 5.537288e-49 | -8.615850e-47 |
| Msa1082700 | Msa1400610 | -0.825569 | 4.364275e-54 | -8.615850e-47 |
| Msa1094540 | Msa1400610 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa1104140 | Msa1400610 | -0.816328 | 5.851390e-52 | -8.615850e-47 |
| Msa0242680 | Msa1400610 | -0.817502 | 3.189637e-52 | -8.615850e-47 |
| Msa0258880 | Msa1400610 | 0.824758 | 6.786058e-54 | -8.615850e-47 |
| Msa0259860 | Msa1400610 | 0.820439 | 6.854599e-53 | -8.615850e-47 |
| Msa0264350 | Msa1400610 | -0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa0270170 | Msa1400610 | 0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa0277450 | Msa1400610 | -0.802028 | 6.811707e-49 | -8.615850e-47 |
| Msa0294560 | Msa1400610 | 0.813643 | 2.306940e-51 | -8.615850e-47 |
| Msa0302450 | Msa1400610 | -0.808025 | 3.793276e-50 | -8.615850e-47 |
| Msa0333720 | Msa1400610 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
| Msa0334350 | Msa1400610 | -0.804342 | 2.262041e-49 | -8.615850e-47 |
| Msa1127830 | Msa1400610 | -0.812197 | 4.784768e-51 | -8.615850e-47 |
| Msa1150500 | Msa1400610 | -0.818734 | 1.679275e-52 | -8.615850e-47 |
| Msa1163650 | Msa1400610 | 0.842315 | 2.787878e-58 | -8.615850e-47 |
| Msa1166010 | Msa1400610 | -0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa1166870 | Msa1400610 | -0.800406 | 1.462966e-48 | -8.615850e-47 |
| Msa1168950 | Msa1400610 | -0.807330 | 5.329071e-50 | -8.615850e-47 |
| Msa1169040 | Msa1400610 | -0.817519 | 3.162672e-52 | -8.615850e-47 |
| Msa1190890 | Msa1400610 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa1193950 | Msa1400610 | 0.857490 | 1.575866e-62 | -8.615850e-47 |
| Msa1201430 | Msa1400610 | 0.802706 | 4.939593e-49 | -8.615850e-47 |
| Msa1208890 | Msa1400610 | 0.994322 | 2.563511e-206 | -8.615850e-47 |
| Msa0508590 | Msa1400610 | -0.825822 | 3.800803e-54 | -8.615850e-47 |
| Msa0508630 | Msa1400610 | -0.824330 | 8.559146e-54 | -8.615850e-47 |
| Msa0509950 | Msa1400610 | 0.842757 | 2.127984e-58 | -8.615850e-47 |
| Msa0511310 | Msa1400610 | -0.802798 | 4.728967e-49 | -8.615850e-47 |
| Msa0519130 | Msa1400610 | -0.821467 | 3.975354e-53 | -8.615850e-47 |
| Msa0525340 | Msa1400610 | -0.802801 | 4.722722e-49 | -8.615850e-47 |
| Msa0526540 | Msa1400610 | -0.813904 | 2.021225e-51 | -8.615850e-47 |
| Msa0563260 | Msa1400610 | 0.829779 | 4.251861e-55 | -8.615850e-47 |
| Msa0576940 | Msa1400610 | -0.812918 | 3.329235e-51 | -8.615850e-47 |
| Msa0586850 | Msa1400610 | -0.802498 | 5.452495e-49 | -8.615850e-47 |
| Msa0850960 | Msa1400610 | -0.802275 | 6.060341e-49 | -8.615850e-47 |
| Msa0867050 | Msa1400610 | 0.807178 | 5.737323e-50 | -8.615850e-47 |
| Msa0882440 | Msa1400610 | 0.804598 | 2.000635e-49 | -8.615850e-47 |
| Msa0909000 | Msa1400610 | 0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0947530 | Msa1400610 | 0.848926 | 4.489838e-60 | -8.615850e-47 |
| Msa0970420 | Msa1400610 | -0.844809 | 6.006387e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400610 | MtrunA17_Chr4g0058461 | 88.978 | 871 | 56 | 4 | 1 | 835 | 1 | 867 | 0.0 | 1518 |
| Msa1400610 | MtrunA17_Chr4g0058471 | 65.517 | 87 | 30 | 0 | 1 | 87 | 1 | 87 | 2.87e-32 | 123 |
| Msa1400610 | MtrunA17_Chr4g0058521 | 63.158 | 95 | 32 | 2 | 3 | 95 | 8 | 101 | 7.39e-24 | 99.0 |
| Msa1400610 | MtrunA17_Chr4g0058511 | 55.814 | 86 | 38 | 0 | 1 | 86 | 32 | 117 | 6.19e-18 | 83.6 |
| Msa1400610 | MtrunA17_Chr4g0058491 | 62.500 | 56 | 21 | 0 | 32 | 87 | 1 | 56 | 1.46e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400610 | AT4G24690.1 | 41.594 | 690 | 282 | 24 | 187 | 835 | 92 | 701 | 6.14e-135 | 418 |
| Msa1400610 | AT4G24690.1 | 44.444 | 171 | 80 | 5 | 3 | 167 | 6 | 167 | 9.70e-32 | 132 |
Find 262 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATAGCCTCAAGCTCTTTA+AGG | 0.137794 | tig0022468:+27408 | None:intergenic |
| CAGGTGGAGCATTGGGATTT+TGG | 0.151370 | tig0022468:+27821 | None:intergenic |
| GCTGATTCAATTTCCAAAAT+TGG | 0.156394 | tig0022468:-29700 | Msa1400610:CDS |
| TAGAATAGACTGTCCAATTT+TGG | 0.173752 | tig0022468:+29687 | None:intergenic |
| GCTAGATAGTCGGTTCATTT+TGG | 0.204417 | tig0022468:-28531 | Msa1400610:CDS |
| GCTTTCCTTCTTCGTATCTA+TGG | 0.221649 | tig0022468:-30931 | Msa1400610:exon |
| TTCGCATTTCTCCATTTAAA+AGG | 0.223823 | tig0022468:-29015 | Msa1400610:CDS |
| TTGAAACGAGGTCCGGTTAT+TGG | 0.231297 | tig0022468:+28920 | None:intergenic |
| CTCCCTCTCTGTTGACTTAG+AGG | 0.241946 | tig0022468:-28372 | Msa1400610:intron |
| AAAATAGGTGGTGGTATCTT+TGG | 0.251206 | tig0022468:+28590 | None:intergenic |
| TCTCTCTCTGGACATAAATT+TGG | 0.269639 | tig0022468:-28130 | Msa1400610:CDS |
| AAACGAGCTTACAAATTCTT+TGG | 0.275467 | tig0022468:+28692 | None:intergenic |
| CATCAGCTTTAACAAAGTTT+AGG | 0.277942 | tig0022468:+29812 | None:intergenic |
| CATCATTTGCTTCAATGAAA+TGG | 0.285825 | tig0022468:-28787 | Msa1400610:CDS |
| CACAGTAGATTGTCCAGTTT+GGG | 0.296918 | tig0022468:+29375 | None:intergenic |
| ATAAATTTGGCCAACGTGTT+TGG | 0.300638 | tig0022468:-28117 | Msa1400610:CDS |
| ACCATTTGATTCACAGGTTC+AGG | 0.310807 | tig0022468:+27802 | None:intergenic |
| AACTCTGCGGTGTTCTTGAT+TGG | 0.317579 | tig0022468:-27313 | Msa1400610:CDS |
| TTCTTGGTTGCATTGTTATT+AGG | 0.318324 | tig0022468:+29124 | None:intergenic |
| ATTGCTTTACAGGCGAAATA+TGG | 0.319387 | tig0022468:-30162 | Msa1400610:intron |
| CCAAGGGAACTCAACTTGTT+TGG | 0.327817 | tig0022468:-28418 | Msa1400610:CDS |
| ATATGTATCTACCAGGTAAC+TGG | 0.329491 | tig0022468:+28170 | None:intergenic |
| TTACCCTTGTCATCACTAAC+AGG | 0.332971 | tig0022468:+29181 | None:intergenic |
| GAAACCTAAAGTAGGGTTCT+TGG | 0.340305 | tig0022468:+29108 | None:intergenic |
| ATTGCAGGGGCTGAGGCGGC+AGG | 0.341825 | tig0022468:+27715 | None:intergenic |
| TAAATTTGGCCAACGTGTTT+GGG | 0.345801 | tig0022468:-28116 | Msa1400610:CDS |
| GCAACCAAGAACCCTACTTT+AGG | 0.347026 | tig0022468:-29112 | Msa1400610:CDS |
| CTACTGTGAAATCCCCTTAC+TGG | 0.349049 | tig0022468:-29360 | Msa1400610:CDS |
| AGAGTATGTGTCCCAGAAAA+TGG | 0.350776 | tig0022468:+29067 | None:intergenic |
| TCACAGTAGATTGTCCAGTT+TGG | 0.361864 | tig0022468:+29374 | None:intergenic |
| CCATCTCGTGTAGCTCTTCA+AGG | 0.362269 | tig0022468:+27282 | None:intergenic |
| TAAGGAACAGAGGCAGGAAT+TGG | 0.372232 | tig0022468:-27776 | Msa1400610:CDS |
| ATCTTAACATGGCTGGGTTG+AGG | 0.372436 | tig0022468:-30089 | Msa1400610:CDS |
| AACATTCCCAGGAGATCTTA+AGG | 0.372829 | tig0022468:+29507 | None:intergenic |
| CACCAGAATGATTGATCATC+TGG | 0.373848 | tig0022468:+29917 | None:intergenic |
| TGATGCTTTGCAAGCTCTGC+CGG | 0.380326 | tig0022468:-29794 | Msa1400610:CDS |
| TATTCAGATATGAACATCTT+GGG | 0.383029 | tig0022468:+28715 | None:intergenic |
| ACTGATTCAATTTCCCAAAC+TGG | 0.383587 | tig0022468:-29388 | Msa1400610:CDS |
| CCTTAAAGAGCTTGAGGCTA+TGG | 0.384896 | tig0022468:-27408 | Msa1400610:CDS |
| CCGGCTGCTCCCTCTTTCTC+TGG | 0.385339 | tig0022468:-27548 | Msa1400610:CDS |
| AAGCATCAAACGTGTTGTTA+TGG | 0.390196 | tig0022468:-26664 | Msa1400610:CDS |
| ATCTTTGTGAATGCAGTAGA+TGG | 0.397744 | tig0022468:+28476 | None:intergenic |
| CAACGTGAGATTGGCCTTGA+GGG | 0.398310 | tig0022468:+29662 | None:intergenic |
| CCGGCTGCTCCCTCTTTCTC+TGG | 0.400791 | tig0022468:-27577 | Msa1400610:CDS |
| CCAGAGAAAGAGGGAGCAGC+CGG | 0.401212 | tig0022468:+27577 | None:intergenic |
| CCGGCTGGTCCCTCTTTCTC+TGG | 0.402017 | tig0022468:-27518 | Msa1400610:CDS |
| TGGTACTCTATTTACGTTAG+TGG | 0.403339 | tig0022468:+29219 | None:intergenic |
| CGATTGGATCTTAACATGGC+TGG | 0.403836 | tig0022468:-30096 | Msa1400610:CDS |
| ACAGGTTCAGGTGGAGCATT+GGG | 0.405280 | tig0022468:+27814 | None:intergenic |
| CAAGGCCAATCTCACGTTGC+TGG | 0.405746 | tig0022468:-29658 | Msa1400610:CDS |
| GTTGAAGTTTGCGGAATGGC+TGG | 0.405848 | tig0022468:+27488 | None:intergenic |
| ATCATTTGCTTCAATGAAAT+GGG | 0.406447 | tig0022468:-28786 | Msa1400610:CDS |
| GGAGGAACATTGAGATCAAC+CGG | 0.409586 | tig0022468:+29259 | None:intergenic |
| TGGAGGATGGCATCTCTCTC+TGG | 0.412068 | tig0022468:-28142 | Msa1400610:CDS |
| ACGTGTTTGGGTCCTTATAC+AGG | 0.412921 | tig0022468:-28104 | Msa1400610:intron |
| CCAAACAAGTTGAGTTCCCT+TGG | 0.416793 | tig0022468:+28418 | None:intergenic |
| ACTGTCATCCTACCTGTATA+AGG | 0.417325 | tig0022468:+28092 | None:intergenic |
| CCGGGGATGGCCAGAGAAAG+AGG | 0.418241 | tig0022468:+27567 | None:intergenic |
| GCCATCCCCTTAAGATCTCC+TGG | 0.418255 | tig0022468:-29514 | Msa1400610:CDS |
| CCAGAGAAAGAGGGAGCAGC+CGG | 0.420571 | tig0022468:+27548 | None:intergenic |
| ACAAAGGTAGCTTCATTTGT+AGG | 0.422052 | tig0022468:+27742 | None:intergenic |
| GTTGTTATGGATTTACTCAA+TGG | 0.424118 | tig0022468:-26651 | Msa1400610:CDS |
| TCCTGTTTGTTTCTGTGTCA+CGG | 0.426335 | tig0022468:+26709 | None:intergenic |
| AGATGTTATATATGTTTAGT+TGG | 0.427727 | tig0022468:-26605 | Msa1400610:three_prime_UTR |
| TGTGAATCAAATGGTTGATA+AGG | 0.428331 | tig0022468:-27794 | Msa1400610:CDS |
| GGAACTCAACTTGTTTGGAT+TGG | 0.429588 | tig0022468:-28413 | Msa1400610:CDS |
| GAAGGTGACACTGAAATTGC+AGG | 0.431036 | tig0022468:+27700 | None:intergenic |
| TGTTTCAAATTCTGTGCTAC+AGG | 0.434650 | tig0022468:-29473 | Msa1400610:CDS |
| GAATAAAGAGCCTCGCGTAT+TGG | 0.436479 | tig0022468:+29769 | None:intergenic |
| AAAATATAGTCTGAAGTCAT+AGG | 0.436772 | tig0022468:+26416 | None:intergenic |
| TTCTCTGGCACATCCCCGGC+TGG | 0.437116 | tig0022468:-27533 | Msa1400610:CDS |
| GACTTTGCATGCTTCGAAAG+AGG | 0.438676 | tig0022468:+28557 | None:intergenic |
| ACTCAACTTGTTTGGATTGG+AGG | 0.441260 | tig0022468:-28410 | Msa1400610:CDS |
| AAAGTTAGATTCGCATCAGC+AGG | 0.441418 | tig0022468:+30039 | None:intergenic |
| AATTGAATCAGTGGAATTAG+AGG | 0.443200 | tig0022468:+29399 | None:intergenic |
| TCTTAACATGGCTGGGTTGA+GGG | 0.444485 | tig0022468:-30088 | Msa1400610:CDS |
| TACCACCAGCAACGTGAGAT+TGG | 0.445557 | tig0022468:+29653 | None:intergenic |
| CGAAATATGGAGATGCCCTC+AGG | 0.446041 | tig0022468:-30149 | Msa1400610:CDS |
| GGATTCTTCTCTCGTTATCA+AGG | 0.446865 | tig0022468:-30910 | Msa1400610:intron |
| GAGCTTGTACCAATTGCAAC+AGG | 0.448357 | tig0022468:+29331 | None:intergenic |
| CATTCCGCAAACTTCAACTC+TGG | 0.450561 | tig0022468:-27483 | Msa1400610:CDS |
| CCAGAAAATGGACAGTCAAT+AGG | 0.454035 | tig0022468:+29079 | None:intergenic |
| CACAGGTTCAGGTGGAGCAT+TGG | 0.454919 | tig0022468:+27813 | None:intergenic |
| ACAAATGAAGCTACCTTTGT+CGG | 0.458001 | tig0022468:-27739 | Msa1400610:CDS |
| TTTACGTTAGTGGATGAGTA+AGG | 0.458086 | tig0022468:+29229 | None:intergenic |
| GTATTCAGATATGAACATCT+TGG | 0.458334 | tig0022468:+28714 | None:intergenic |
| TTATCAACCATTTGATTCAC+AGG | 0.459634 | tig0022468:+27796 | None:intergenic |
| GTCCAGATGATCAATCATTC+TGG | 0.463564 | tig0022468:-29919 | Msa1400610:CDS |
| CAGGTTGAGTCTAAAATTGC+GGG | 0.464751 | tig0022468:-29289 | Msa1400610:CDS |
| GGCTCTAGTGGAGGTGCTAG+TGG | 0.465069 | tig0022468:-29877 | Msa1400610:CDS |
| TTTAGGAGTGACAGATTCAC+TGG | 0.467029 | tig0022468:+29609 | None:intergenic |
| TCAGCAATATTTGCTAGCAC+TGG | 0.467080 | tig0022468:+29718 | None:intergenic |
| CCAGAGAAAGAGGGACCAGC+CGG | 0.467720 | tig0022468:+27518 | None:intergenic |
| ACTCTGCGGTGTTCTTGATT+GGG | 0.468201 | tig0022468:-27312 | Msa1400610:CDS |
| CGGGGATGTGCCAGAGAAAG+AGG | 0.468555 | tig0022468:+27538 | None:intergenic |
| TGGGGCTGCGCCAGAGAAAG+AGG | 0.468968 | tig0022468:+27508 | None:intergenic |
| AAAGAGGGAGCAGCCGGGGA+TGG | 0.470010 | tig0022468:+27554 | None:intergenic |
| TTGGTGTTGGTAGCTCTGAA+TGG | 0.475753 | tig0022468:-27900 | Msa1400610:CDS |
| TGTGGAGTGTATCCAATAAC+CGG | 0.475772 | tig0022468:-28932 | Msa1400610:CDS |
| TACTGTGAAATCCCCTTACT+GGG | 0.475999 | tig0022468:-29359 | Msa1400610:CDS |
| TTGGTAGCTCTGAATGGCCT+CGG | 0.477438 | tig0022468:-27894 | Msa1400610:CDS |
| GCATCCAGAGTTGAAGTTTG+CGG | 0.479595 | tig0022468:+27479 | None:intergenic |
| CTTTAACAAAGTTTAGGAAA+GGG | 0.480571 | tig0022468:+29818 | None:intergenic |
| CTCTTTCTCTGGCACATCCC+CGG | 0.481260 | tig0022468:-27537 | Msa1400610:CDS |
| ACGAAGAAGGAAAGCGAAGA+AGG | 0.482083 | tig0022468:+30939 | None:intergenic |
| CTTAAAGAGCTTGAGGCTAT+GGG | 0.484713 | tig0022468:-27407 | Msa1400610:CDS |
| TCTGATGCTGGTGGCTCTAG+TGG | 0.484789 | tig0022468:-29889 | Msa1400610:CDS |
| TTGAAGTTTGCGGAATGGCT+GGG | 0.486247 | tig0022468:+27489 | None:intergenic |
| ACATTCCCAGGAGATCTTAA+GGG | 0.486983 | tig0022468:+29508 | None:intergenic |
| CTAGCATAGTCACTGGCATT+GGG | 0.489217 | tig0022468:+29550 | None:intergenic |
| CACTGAAATTGCAGGGGCTG+AGG | 0.489264 | tig0022468:+27708 | None:intergenic |
| TTTAGGAAAGGGTCTGAGAC+AGG | 0.490112 | tig0022468:+29829 | None:intergenic |
| TGAGGCTATGGGTTTCAAGC+AGG | 0.491156 | tig0022468:-27396 | Msa1400610:CDS |
| CTACTGCATTCACAAAGATC+TGG | 0.496939 | tig0022468:-28472 | Msa1400610:CDS |
| CAGAGAAAGAGGGACCAGCC+GGG | 0.497692 | tig0022468:+27519 | None:intergenic |
| TCCGTGACACAGAAACAAAC+AGG | 0.498645 | tig0022468:-26710 | Msa1400610:CDS |
| TCTAGCATAGTCACTGGCAT+TGG | 0.500215 | tig0022468:+29549 | None:intergenic |
| AAGGAACAGAGGCAGGAATT+GGG | 0.502089 | tig0022468:-27775 | Msa1400610:CDS |
| TATCAATGTTCAACCTATTG+AGG | 0.502390 | tig0022468:-27863 | Msa1400610:CDS |
| TCTGTCACTCCTAAAGCAAA+AGG | 0.510808 | tig0022468:-29601 | Msa1400610:CDS |
| AGATAATGATCTTGTGGAAG+AGG | 0.510946 | tig0022468:-27435 | Msa1400610:CDS |
| CAGAGAAAGAGGGAGCAGCC+GGG | 0.511097 | tig0022468:+27549 | None:intergenic |
| GCAGGTTGATTTAAACAAAG+AGG | 0.511557 | tig0022468:-27378 | Msa1400610:CDS |
| CCTCTTTCTCTGGCCATCCC+CGG | 0.512414 | tig0022468:-27567 | Msa1400610:CDS |
| GGTTGATAAGGAACAGAGGC+AGG | 0.513182 | tig0022468:-27782 | Msa1400610:CDS |
| GAGAATGACAGATTACAATC+TGG | 0.514264 | tig0022468:-27351 | Msa1400610:CDS |
| TTGCAGGGGCTGAGGCGGCA+GGG | 0.515093 | tig0022468:+27716 | None:intergenic |
| AGAGCCTCGCGTATTGGCTC+CGG | 0.515321 | tig0022468:+29775 | None:intergenic |
| ACGTCAAGCTCTTTCTCTAC+AGG | 0.519273 | tig0022468:+28214 | None:intergenic |
| GATTGGATCTTAACATGGCT+GGG | 0.519526 | tig0022468:-30095 | Msa1400610:CDS |
| CAGAGAAAGAGGGAGCAGCC+GGG | 0.519706 | tig0022468:+27578 | None:intergenic |
| AGACAGGAGGATATGTCAAA+GGG | 0.520390 | tig0022468:+29845 | None:intergenic |
| AAGAAGAAGCTTTAGCGTAC+CGG | 0.520617 | tig0022468:+31069 | None:intergenic |
| TAGCGTTAATAGCGGCTCAC+CGG | 0.521967 | tig0022468:-31088 | Msa1400610:five_prime_UTR |
| TAAAATTGCGGGAGTTTCCC+CGG | 0.522427 | tig0022468:-29278 | Msa1400610:CDS |
| GGAACTTGTCTCGAAGATGC+AGG | 0.522795 | tig0022468:+29421 | None:intergenic |
| CATTCAATGCCACCTCCTCT+AGG | 0.523514 | tig0022468:-29043 | Msa1400610:CDS |
| TGAAATTGCAGGGGCTGAGG+CGG | 0.524012 | tig0022468:+27711 | None:intergenic |
| GGATTTACTCAATGGAGAGT+AGG | 0.524594 | tig0022468:-26643 | Msa1400610:exon |
| TTTGGATTTGAAACGAGGTC+CGG | 0.524974 | tig0022468:+28913 | None:intergenic |
| ACCTGAACCTGTGAATCAAA+TGG | 0.525429 | tig0022468:-27803 | Msa1400610:CDS |
| TTTAGAGCGCCCCAGTTACC+TGG | 0.526761 | tig0022468:-28181 | Msa1400610:CDS |
| GCTCACTCTGATGCATTGAA+TGG | 0.527413 | tig0022468:-28986 | Msa1400610:CDS |
| AGAGAAAGAGGGAGCAGCCG+GGG | 0.528363 | tig0022468:+27579 | None:intergenic |
| TTGAATATTCCCCTTGGTGT+TGG | 0.532493 | tig0022468:-27913 | Msa1400610:CDS |
| GCTTTAACAAAGTTTAGGAA+AGG | 0.533743 | tig0022468:+29817 | None:intergenic |
| GGAGCACTGAAACCTAAAGT+AGG | 0.534494 | tig0022468:+29100 | None:intergenic |
| CTGGTAGATACATATCATAC+TGG | 0.536570 | tig0022468:-28162 | Msa1400610:CDS |
| AAGCACAGATAATGATCTTG+TGG | 0.539260 | tig0022468:-27441 | Msa1400610:CDS |
| TTTAGACTCAACCTGTCGAC+TGG | 0.539536 | tig0022468:+29297 | None:intergenic |
| TGTCATAGACGGAACAATGA+TGG | 0.540855 | tig0022468:-28501 | Msa1400610:CDS |
| CGAAAGTTTCCTAGAGGAGG+TGG | 0.541922 | tig0022468:+29034 | None:intergenic |
| AGAATCCATAGATACGAAGA+AGG | 0.548262 | tig0022468:+30926 | None:intergenic |
| CAAACAAGTTGAGTTCCCTT+GGG | 0.548283 | tig0022468:+28419 | None:intergenic |
| AGAGAAAGAGGGAGCAGCCG+GGG | 0.548629 | tig0022468:+27550 | None:intergenic |
| TTGGATGTTAATGTCATAGA+CGG | 0.549049 | tig0022468:-28512 | Msa1400610:CDS |
| TCAGATTGATTATATCAGAA+TGG | 0.550265 | tig0022468:-28760 | Msa1400610:CDS |
| CACGAACATTGAAGCGCCTG+AGG | 0.551408 | tig0022468:+30133 | None:intergenic |
| AGAGAAAGAGGGACCAGCCG+GGG | 0.554370 | tig0022468:+27520 | None:intergenic |
| TCTGGTGCTAAATCTGATGC+TGG | 0.555805 | tig0022468:-29901 | Msa1400610:CDS |
| GGTTGCAAATCAAGATAGAA+TGG | 0.556980 | tig0022468:+26368 | None:intergenic |
| TGAAGTTTGCGGAATGGCTG+GGG | 0.557993 | tig0022468:+27490 | None:intergenic |
| CAGTATGATATGTATCTACC+AGG | 0.558081 | tig0022468:+28163 | None:intergenic |
| TATGTATCTACCAGGTAACT+GGG | 0.559766 | tig0022468:+28171 | None:intergenic |
| ATCTGGCGGATGCGCAACAA+TGG | 0.559803 | tig0022468:-28455 | Msa1400610:CDS |
| TCTACAGGTACACCGTCCTC+AGG | 0.560554 | tig0022468:+28229 | None:intergenic |
| CGGGGATGGCCAGAGAAAGA+GGG | 0.560609 | tig0022468:+27568 | None:intergenic |
| CAGAGTTGAAGTTTGCGGAA+TGG | 0.561176 | tig0022468:+27484 | None:intergenic |
| GTGGATGAGTAAGGATTGCA+TGG | 0.561344 | tig0022468:+29238 | None:intergenic |
| CCTTGAAGAGCTACACGAGA+TGG | 0.562183 | tig0022468:-27282 | Msa1400610:intron |
| TTCAAATTCTGTGCTACAGG+AGG | 0.562592 | tig0022468:-29470 | Msa1400610:CDS |
| CCCAGGAGATCTTAAGGGGA+TGG | 0.564848 | tig0022468:+29513 | None:intergenic |
| TTGAGATATGTTGATGAGGA+TGG | 0.568310 | tig0022468:-30018 | Msa1400610:CDS |
| TCTTTATTCGTCATTTGCAA+AGG | 0.570245 | tig0022468:-29755 | Msa1400610:CDS |
| GCAACGTGAGATTGGCCTTG+AGG | 0.571363 | tig0022468:+29661 | None:intergenic |
| GGCACTTCAGTGTGGCCCAA+GGG | 0.572964 | tig0022468:-28434 | Msa1400610:CDS |
| TGTGGATGAGAATAATCGAT+TGG | 0.573157 | tig0022468:-30112 | Msa1400610:CDS |
| CTAACAGGGACTGCTGATGA+AGG | 0.574980 | tig0022468:+29196 | None:intergenic |
| AGTGACTATGCTAGATCTAG+TGG | 0.575122 | tig0022468:-29541 | Msa1400610:CDS |
| GAGACAGGAGGATATGTCAA+AGG | 0.575364 | tig0022468:+29844 | None:intergenic |
| GAGCACTGAAACCTAAAGTA+GGG | 0.576966 | tig0022468:+29101 | None:intergenic |
| GGCTCTCCTTAAAGAGCTTG+AGG | 0.577007 | tig0022468:-27414 | Msa1400610:CDS |
| ATTGAATGGCATGTTTCACA+AGG | 0.578053 | tig0022468:-28972 | Msa1400610:CDS |
| CACACTTTGGATTTGAAACG+AGG | 0.578382 | tig0022468:+28908 | None:intergenic |
| AAGGTGACACTGAAATTGCA+GGG | 0.578453 | tig0022468:+27701 | None:intergenic |
| CTGAACTTGAATATTCCCCT+TGG | 0.578935 | tig0022468:-27919 | Msa1400610:CDS |
| ATTTGATTCACAGGTTCAGG+TGG | 0.578969 | tig0022468:+27805 | None:intergenic |
| GGGGTCCGTTGTGATGGTTG+TGG | 0.582288 | tig0022468:-28950 | Msa1400610:CDS |
| TGTTGATGAGGATGGCGACT+TGG | 0.583892 | tig0022468:-30010 | Msa1400610:CDS |
| TGAGGCGGCAGGGCCGACAA+AGG | 0.585780 | tig0022468:+27726 | None:intergenic |
| TGGCACTTCAGTGTGGCCCA+AGG | 0.586891 | tig0022468:-28435 | Msa1400610:CDS |
| GAAGGTCGATGCATCTCTCA+AGG | 0.588481 | tig0022468:-27968 | Msa1400610:intron |
| AGTTTGGGAAATTGAATCAG+TGG | 0.589643 | tig0022468:+29390 | None:intergenic |
| TTGAATATCCCAGGTTCCTG+AGG | 0.592600 | tig0022468:-28245 | Msa1400610:intron |
| CTTGGGGAACGAAAAGATGC+AGG | 0.597899 | tig0022468:+28732 | None:intergenic |
| CAGTCTATTCTAAACCCTCA+AGG | 0.600178 | tig0022468:-29676 | Msa1400610:CDS |
| AACCTCTAAGTCAACAGAGA+GGG | 0.600363 | tig0022468:+28370 | None:intergenic |
| TGGCGACTTGGTGAATCTTG+TGG | 0.604928 | tig0022468:-29998 | Msa1400610:CDS |
| GGGGATGTGCCAGAGAAAGA+GGG | 0.605312 | tig0022468:+27539 | None:intergenic |
| ACAGGTTGAGTCTAAAATTG+CGG | 0.605495 | tig0022468:-29290 | Msa1400610:CDS |
| CCATCCCCTTAAGATCTCCT+GGG | 0.605783 | tig0022468:-29513 | Msa1400610:CDS |
| CTGTGAAATCCCCTTACTGG+GGG | 0.606740 | tig0022468:-29357 | Msa1400610:CDS |
| CATTCCCAGGAGATCTTAAG+GGG | 0.607259 | tig0022468:+29509 | None:intergenic |
| GGGGCTGCGCCAGAGAAAGA+GGG | 0.607968 | tig0022468:+27509 | None:intergenic |
| AGTCCCTGTTAGTGATGACA+AGG | 0.614739 | tig0022468:-29185 | Msa1400610:CDS |
| AGGTCCGCAGTCTCCATGTG+TGG | 0.614993 | tig0022468:-29581 | Msa1400610:CDS |
| ATTGAATCAGTGGAATTAGA+GGG | 0.618823 | tig0022468:+29400 | None:intergenic |
| GGCCAATCTCACGTTGCTGG+TGG | 0.619129 | tig0022468:-29655 | Msa1400610:CDS |
| GATGCTGGTGGCTCTAGTGG+AGG | 0.620357 | tig0022468:-29886 | Msa1400610:CDS |
| ACTAGATCTAGCATAGTCAC+TGG | 0.623545 | tig0022468:+29543 | None:intergenic |
| TTCAGAGCTACCAACACCAA+GGG | 0.624349 | tig0022468:+27903 | None:intergenic |
| TGAATGGCATGTTTCACAAG+GGG | 0.625755 | tig0022468:-28970 | Msa1400610:CDS |
| CAGGCGCTTCAATGTTCGTG+TGG | 0.626475 | tig0022468:-30130 | Msa1400610:CDS |
| CTGCATTCACAAAGATCTGG+CGG | 0.628230 | tig0022468:-28469 | Msa1400610:CDS |
| TAATCGATTGGATCTTAACA+TGG | 0.630522 | tig0022468:-30100 | Msa1400610:CDS |
| ATTCAGATATGAACATCTTG+GGG | 0.630633 | tig0022468:+28716 | None:intergenic |
| ATATCCCAGGTTCCTGAGGA+CGG | 0.631323 | tig0022468:-28241 | Msa1400610:intron |
| ATACATATCATACTGGAGGA+TGG | 0.631704 | tig0022468:-28155 | Msa1400610:CDS |
| ATGCGAAAGTTTCCTAGAGG+AGG | 0.632193 | tig0022468:+29031 | None:intergenic |
| GCTATTAACGCTAAATGAAG+CGG | 0.635016 | tig0022468:+31098 | None:intergenic |
| TTGAATGGCATGTTTCACAA+GGG | 0.637056 | tig0022468:-28971 | Msa1400610:CDS |
| TCGTGTAGCTCTTCAAGGAG+AGG | 0.639515 | tig0022468:+27287 | None:intergenic |
| AACTTTGAGATATGTTGATG+AGG | 0.640200 | tig0022468:-30022 | Msa1400610:CDS |
| CTTGTACCAATTGCAACAGG+AGG | 0.643181 | tig0022468:+29334 | None:intergenic |
| GTAGATACATATCATACTGG+AGG | 0.647336 | tig0022468:-28159 | Msa1400610:CDS |
| TCAATGCATCAGAGTGAGCG+TGG | 0.647531 | tig0022468:+28990 | None:intergenic |
| TAAATCGTCTATTGATGACA+AGG | 0.648030 | tig0022468:-29161 | Msa1400610:CDS |
| TACCCTTGTCATCACTAACA+GGG | 0.648629 | tig0022468:+29182 | None:intergenic |
| AACACTAAATAATCGCTGCT+AGG | 0.648861 | tig0022468:-26566 | Msa1400610:three_prime_UTR |
| CAAAGTCTAAGCTAGATAGT+CGG | 0.651873 | tig0022468:-28541 | Msa1400610:CDS |
| GGTGCTAAATCTGATGCTGG+TGG | 0.654255 | tig0022468:-29898 | Msa1400610:CDS |
| GAGGAACATTGAGATCAACC+GGG | 0.658453 | tig0022468:+29260 | None:intergenic |
| GCTTCATTTAGCGTTAATAG+CGG | 0.661723 | tig0022468:-31096 | Msa1400610:five_prime_UTR |
| AAGTTAGATTCGCATCAGCA+GGG | 0.661745 | tig0022468:+30040 | None:intergenic |
| ACGAACATTGAAGCGCCTGA+GGG | 0.664144 | tig0022468:+30134 | None:intergenic |
| ACAGGGACTGCTGATGAAGG+TGG | 0.672158 | tig0022468:+29199 | None:intergenic |
| ATTCAGAGCTACCAACACCA+AGG | 0.681533 | tig0022468:+27902 | None:intergenic |
| AGGAAAGGGTCTGAGACAGG+AGG | 0.683595 | tig0022468:+29832 | None:intergenic |
| AAATGGTTGATAAGGAACAG+AGG | 0.684433 | tig0022468:-27786 | Msa1400610:CDS |
| GAATCCACACATGGAGACTG+CGG | 0.686458 | tig0022468:+29577 | None:intergenic |
| TTAGGAGTGACAGATTCACT+GGG | 0.687144 | tig0022468:+29610 | None:intergenic |
| AGGAGGATATGTCAAAGGGG+TGG | 0.690825 | tig0022468:+29849 | None:intergenic |
| GCAACAATGGCACTTCAGTG+TGG | 0.692755 | tig0022468:-28442 | Msa1400610:CDS |
| AAATCGTCTATTGATGACAA+GGG | 0.693123 | tig0022468:-29160 | Msa1400610:CDS |
| ACATTGATATCTATAATCCG+AGG | 0.697429 | tig0022468:+27877 | None:intergenic |
| AAACCTCTAAGTCAACAGAG+AGG | 0.699177 | tig0022468:+28369 | None:intergenic |
| TTGGGAGCAGAATCCACACA+TGG | 0.699336 | tig0022468:+29568 | None:intergenic |
| ACTGTGAAATCCCCTTACTG+GGG | 0.699540 | tig0022468:-29358 | Msa1400610:CDS |
| AGGTGACACTGAAATTGCAG+GGG | 0.705414 | tig0022468:+27702 | None:intergenic |
| GAATGGCATGTTTCACAAGG+GGG | 0.707414 | tig0022468:-28969 | Msa1400610:CDS |
| TCAGAGCTACCAACACCAAG+GGG | 0.709272 | tig0022468:+27904 | None:intergenic |
| GGGAACGAAAAGATGCAGGA+CGG | 0.713231 | tig0022468:+28736 | None:intergenic |
| GAAATGCGAAAGTTTCCTAG+AGG | 0.713272 | tig0022468:+29028 | None:intergenic |
| ACACTCCACAACCATCACAA+CGG | 0.720187 | tig0022468:+28945 | None:intergenic |
| GATGAGTAAGGATTGCATGG+AGG | 0.721249 | tig0022468:+29241 | None:intergenic |
| GTCCCTGTTAGTGATGACAA+GGG | 0.724027 | tig0022468:-29184 | Msa1400610:CDS |
| ATGTATCTACCAGGTAACTG+GGG | 0.725191 | tig0022468:+28172 | None:intergenic |
| AGGAACATTGAGATCAACCG+GGG | 0.730566 | tig0022468:+29261 | None:intergenic |
| CAGTCAATTGATGAACTCTG+CGG | 0.730626 | tig0022468:-27326 | Msa1400610:CDS |
| GACAGGAGGATATGTCAAAG+GGG | 0.732984 | tig0022468:+29846 | None:intergenic |
| GTATAAGGACCCAAACACGT+TGG | 0.738449 | tig0022468:+28107 | None:intergenic |
| GTGACACAGAAACAAACAGG+AGG | 0.742203 | tig0022468:-26707 | Msa1400610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTTTTTATTATTA+CGG | - | tig0022468:27088-27107 | Msa1400610:intron | 0.0% |
| !!! | ATTTAGTTTATTTTTTCATT+TGG | - | tig0022468:30242-30261 | Msa1400610:intron | 10.0% |
| !! | AATTAATTAAGTAAATCAAA+AGG | - | tig0022468:30288-30307 | Msa1400610:intron | 10.0% |
| !! | CAAAATAATGAAACATAAAT+TGG | + | tig0022468:26623-26642 | None:intergenic | 15.0% |
| !!! | CAATTTATGTTTCATTATTT+TGG | - | tig0022468:26621-26640 | Msa1400610:three_prime_UTR | 15.0% |
| !!! | GATTATATTGTTTTCAATAT+TGG | - | tig0022468:26768-26787 | Msa1400610:intron | 15.0% |
| !! | TATCAAAACAATAAAACTAA+GGG | + | tig0022468:26854-26873 | None:intergenic | 15.0% |
| !! | TTATCAAAACAATAAAACTA+AGG | + | tig0022468:26855-26874 | None:intergenic | 15.0% |
| !! | TTACATCTTTACATATAAAA+TGG | - | tig0022468:27264-27283 | Msa1400610:intron | 15.0% |
| !! | AAGAATATTATTAAACCATT+AGG | + | tig0022468:29465-29484 | None:intergenic | 15.0% |
| !! | AACATAAATTGGAAAAAGAA+GGG | + | tig0022468:26612-26631 | None:intergenic | 20.0% |
| !! | AAACATAAATTGGAAAAAGA+AGG | + | tig0022468:26613-26632 | None:intergenic | 20.0% |
| !!! | GGTTCAATATTAGTTTATTA+GGG | - | tig0022468:27109-27128 | Msa1400610:intron | 20.0% |
| !!! | GTTCAATATTAGTTTATTAG+GGG | - | tig0022468:27110-27129 | Msa1400610:intron | 20.0% |
| !! | AAATAAATTCCAATGAAATG+TGG | + | tig0022468:27209-27228 | None:intergenic | 20.0% |
| !!! | TATTTTAAAATGCTGCTTTT+AGG | - | tig0022468:28612-28631 | Msa1400610:intron | 20.0% |
| !!! | ATTTTAAAATGCTGCTTTTA+GGG | - | tig0022468:28613-28632 | Msa1400610:intron | 20.0% |
| !! | TTCAAACAAAATATCAGATA+GGG | + | tig0022468:29215-29234 | None:intergenic | 20.0% |
| !! | ATTCAAACAAAATATCAGAT+AGG | + | tig0022468:29216-29235 | None:intergenic | 20.0% |
| !! | TTTGAGTCAAAAATTTATAC+AGG | + | tig0022468:29429-29448 | None:intergenic | 20.0% |
| !!! | TTAATGTTTAAAATTGCACT+GGG | + | tig0022468:30334-30353 | None:intergenic | 20.0% |
| !!! | TTTTACTTTTTGTTACAAGA+GGG | + | tig0022468:30409-30428 | None:intergenic | 20.0% |
| !!! | ATTTTACTTTTTGTTACAAG+AGG | + | tig0022468:30410-30429 | None:intergenic | 20.0% |
| !! | CTTGTAACAAAAAGTAAAAT+AGG | - | tig0022468:30410-30429 | Msa1400610:intron | 20.0% |
| !! | TAAAGAATTTGTATCATAAC+AGG | + | tig0022468:30452-30471 | None:intergenic | 20.0% |
| !!! | AGTACGAAATTTTATTGATT+AGG | + | tig0022468:30500-30519 | None:intergenic | 20.0% |
| !! | AGATGTTATATATGTTTAGT+TGG | - | tig0022468:30870-30889 | Msa1400610:intron | 20.0% |
| !! | AGCAAATTTTCATTCTGTTA+GGG | - | tig0022468:26458-26477 | Msa1400610:three_prime_UTR | 25.0% |
| ! | ACATAAATTGGAAAAAGAAG+GGG | + | tig0022468:26611-26630 | None:intergenic | 25.0% |
| !! | TAATCGTTATGATTTTGTGA+CGG | - | tig0022468:26723-26742 | Msa1400610:intron | 25.0% |
| !!! | TTGTTTTGATAATCAGAACA+AGG | - | tig0022468:26863-26882 | Msa1400610:intron | 25.0% |
| ! | TTTACTCCTAACATGATAAT+CGG | - | tig0022468:26979-26998 | Msa1400610:intron | 25.0% |
| ! | ATAAATCCGATTATCATGTT+AGG | + | tig0022468:26988-27007 | None:intergenic | 25.0% |
| ! | AACATGATAATCGGATTTAT+TGG | - | tig0022468:26988-27007 | Msa1400610:intron | 25.0% |
| !! | CGGTTCAATATTAGTTTATT+AGG | - | tig0022468:27108-27127 | Msa1400610:intron | 25.0% |
| ! | ATCTTTACATATAAAATGGC+CGG | - | tig0022468:27268-27287 | Msa1400610:intron | 25.0% |
| ! | GTCATTTATTATTGCTTTAC+AGG | - | tig0022468:27303-27322 | Msa1400610:CDS | 25.0% |
| ! | CTTTAACAAAGTTTAGGAAA+GGG | + | tig0022468:27660-27679 | None:intergenic | 25.0% |
| !! | TAGTTTTCTTTTCTGCATAA+TGG | + | tig0022468:28659-28678 | None:intergenic | 25.0% |
| ! | ATCATTTGCTTCAATGAAAT+GGG | - | tig0022468:28689-28708 | Msa1400610:intron | 25.0% |
| ! | TCAGATTGATTATATCAGAA+TGG | - | tig0022468:28715-28734 | Msa1400610:CDS | 25.0% |
| ! | TATTCAGATATGAACATCTT+GGG | + | tig0022468:28763-28782 | None:intergenic | 25.0% |
| !! | TTTATACCTTCTCTCTTTTA+TGG | - | tig0022468:28851-28870 | Msa1400610:intron | 25.0% |
| !!! | ATATTTTGTTTGAATATCCC+AGG | - | tig0022468:29221-29240 | Msa1400610:CDS | 25.0% |
| !! | AAACACATTTTTCTTCCTAA+TGG | - | tig0022468:29447-29466 | Msa1400610:CDS | 25.0% |
| !! | CTTAATGTTTAAAATTGCAC+TGG | + | tig0022468:30335-30354 | None:intergenic | 25.0% |
| !! | TTATGAAAGTTGATCTCATA+AGG | + | tig0022468:30550-30569 | None:intergenic | 25.0% |
| ! | AATAAAAGCAACACATTCAT+TGG | + | tig0022468:30654-30673 | None:intergenic | 25.0% |
| !!! | TGTTGCTTTTATTGTTCTTT+TGG | - | tig0022468:30661-30680 | Msa1400610:intron | 25.0% |
| ! | AATAAAAGCAACACATTCAT+TGG | + | tig0022468:30654-30673 | None:intergenic | 25.0% |
| !!! | TTTTTTGCTTAATGACTGAT+GGG | - | tig0022468:30726-30745 | Msa1400610:intron | 25.0% |
| !! | AAAATATAGTCTGAAGTCAT+AGG | + | tig0022468:31062-31081 | None:intergenic | 25.0% |
| ! | CAGCAAATTTTCATTCTGTT+AGG | - | tig0022468:26457-26476 | Msa1400610:three_prime_UTR | 30.0% |
| ! | ATTTTCATTCTGTTAGGGTT+AGG | - | tig0022468:26463-26482 | Msa1400610:three_prime_UTR | 30.0% |
| ! | TTTTCATTCTGTTAGGGTTA+GGG | - | tig0022468:26464-26483 | Msa1400610:three_prime_UTR | 30.0% |
| !!! | ATTTTTGTTGTTTCATGCAC+TGG | - | tig0022468:26664-26683 | Msa1400610:CDS | 30.0% |
| AAATTGTTGAATTGCTAGTG+AGG | - | tig0022468:26895-26914 | Msa1400610:intron | 30.0% | |
| !!! | AATTTTTTTGCACTAGAACG+TGG | - | tig0022468:26941-26960 | Msa1400610:intron | 30.0% |
| !!! | ATTTTTTTGCACTAGAACGT+GGG | - | tig0022468:26942-26961 | Msa1400610:intron | 30.0% |
| ATATTCTCAATCATGGGATA+AGG | + | tig0022468:27061-27080 | None:intergenic | 30.0% | |
| TTATCCCATGATTGAGAATA+TGG | - | tig0022468:27060-27079 | Msa1400610:intron | 30.0% | |
| CTATCCATATTCTCAATCAT+GGG | + | tig0022468:27067-27086 | None:intergenic | 30.0% | |
| ACTATCCATATTCTCAATCA+TGG | + | tig0022468:27068-27087 | None:intergenic | 30.0% | |
| ! | AGTTTATTAGGGGTATATGT+TGG | - | tig0022468:27120-27139 | Msa1400610:intron | 30.0% |
| TATATGTTGGATTGAAGACA+AGG | - | tig0022468:27133-27152 | Msa1400610:intron | 30.0% | |
| AAATGACATGATATGAAGTC+CGG | + | tig0022468:27290-27309 | None:intergenic | 30.0% | |
| TAATCGATTGGATCTTAACA+TGG | - | tig0022468:27375-27394 | Msa1400610:CDS | 30.0% | |
| !! | AACTTTGAGATATGTTGATG+AGG | - | tig0022468:27453-27472 | Msa1400610:CDS | 30.0% |
| GCTTTAACAAAGTTTAGGAA+AGG | + | tig0022468:27661-27680 | None:intergenic | 30.0% | |
| ! | CATCAGCTTTAACAAAGTTT+AGG | + | tig0022468:27666-27685 | None:intergenic | 30.0% |
| TCTTTATTCGTCATTTGCAA+AGG | - | tig0022468:27720-27739 | Msa1400610:CDS | 30.0% | |
| ! | GCTGATTCAATTTCCAAAAT+TGG | - | tig0022468:27775-27794 | Msa1400610:CDS | 30.0% |
| ! | TAGAATAGACTGTCCAATTT+TGG | + | tig0022468:27791-27810 | None:intergenic | 30.0% |
| !!! | TTAGTTTTAACAACATTCCC+AGG | + | tig0022468:27982-28001 | None:intergenic | 30.0% |
| ATTGAATCAGTGGAATTAGA+GGG | + | tig0022468:28078-28097 | None:intergenic | 30.0% | |
| AATTGAATCAGTGGAATTAG+AGG | + | tig0022468:28079-28098 | None:intergenic | 30.0% | |
| ! | TAAATCGTCTATTGATGACA+AGG | - | tig0022468:28314-28333 | Msa1400610:intron | 30.0% |
| ! | AAATCGTCTATTGATGACAA+GGG | - | tig0022468:28315-28334 | Msa1400610:intron | 30.0% |
| ! | TTCTTGGTTGCATTGTTATT+AGG | + | tig0022468:28354-28373 | None:intergenic | 30.0% |
| TTCGCATTTCTCCATTTAAA+AGG | - | tig0022468:28460-28479 | Msa1400610:CDS | 30.0% | |
| CATCATTTGCTTCAATGAAA+TGG | - | tig0022468:28688-28707 | Msa1400610:intron | 30.0% | |
| ATTCAGATATGAACATCTTG+GGG | + | tig0022468:28762-28781 | None:intergenic | 30.0% | |
| GTATTCAGATATGAACATCT+TGG | + | tig0022468:28764-28783 | None:intergenic | 30.0% | |
| AAACGAGCTTACAAATTCTT+TGG | + | tig0022468:28786-28805 | None:intergenic | 30.0% | |
| !!! | AGAGGTCCTGTTTTAAAAAT+AGG | + | tig0022468:28903-28922 | None:intergenic | 30.0% |
| TTGGATGTTAATGTCATAGA+CGG | - | tig0022468:28963-28982 | Msa1400610:CDS | 30.0% | |
| !! | AATTTAATTAGCCTTTCCCT+AGG | - | tig0022468:29161-29180 | Msa1400610:CDS | 30.0% |
| ACATTGATATCTATAATCCG+AGG | + | tig0022468:29601-29620 | None:intergenic | 30.0% | |
| TATCAATGTTCAACCTATTG+AGG | - | tig0022468:29612-29631 | Msa1400610:CDS | 30.0% | |
| TGAAAAACATCATCCTCAAT+AGG | + | tig0022468:29628-29647 | None:intergenic | 30.0% | |
| TTATCAACCATTTGATTCAC+AGG | + | tig0022468:29682-29701 | None:intergenic | 30.0% | |
| ! | TGTGAATCAAATGGTTGATA+AGG | - | tig0022468:29681-29700 | Msa1400610:CDS | 30.0% |
| !!! | TACGCTTCATGTTTTAATTG+TGG | + | tig0022468:30377-30396 | None:intergenic | 30.0% |
| !!! | GTGTTGCTTTTATTGTTTTG+TGG | - | tig0022468:30699-30718 | Msa1400610:intron | 30.0% |
| !!! | CTTTTTTGCTTAATGACTGA+TGG | - | tig0022468:30725-30744 | Msa1400610:intron | 30.0% |
| ! | TTTTTGCTTAATGACTGATG+GGG | - | tig0022468:30727-30746 | Msa1400610:intron | 30.0% |
| GTTGTTATGGATTTACTCAA+TGG | - | tig0022468:30824-30843 | Msa1400610:intron | 30.0% | |
| !!! | GAGAGTAGGTTTTAATTACA+TGG | - | tig0022468:30846-30865 | Msa1400610:intron | 30.0% |
| CATTCATGAGAAAAAAAGGT+TGG | + | tig0022468:31131-31150 | None:intergenic | 30.0% | |
| GCTATTAACGCTAAATGAAG+CGG | + | tig0022468:26380-26399 | None:intergenic | 35.0% | |
| GCTTCATTTAGCGTTAATAG+CGG | - | tig0022468:26379-26398 | Msa1400610:three_prime_UTR | 35.0% | |
| AGAATCCATAGATACGAAGA+AGG | + | tig0022468:26552-26571 | None:intergenic | 35.0% | |
| ! | GGTTAATTAGGTTTTGCATG+TGG | - | tig0022468:26691-26710 | Msa1400610:CDS | 35.0% |
| ! | ACACTCCTAATTGAAGGTTT+TGG | - | tig0022468:27026-27045 | Msa1400610:intron | 35.0% |
| CCTAACCAAAACCTTCAATT+AGG | + | tig0022468:27034-27053 | None:intergenic | 35.0% | |
| !!! | CCTAATTGAAGGTTTTGGTT+AGG | - | tig0022468:27031-27050 | Msa1400610:intron | 35.0% |
| !! | AAGGATCCAGTAGGTTTTAT+TGG | - | tig0022468:27152-27171 | Msa1400610:intron | 35.0% |
| ATCACACCAATAAAACCTAC+TGG | + | tig0022468:27161-27180 | None:intergenic | 35.0% | |
| GATGTCTATCCACATTTCAT+TGG | - | tig0022468:27197-27216 | Msa1400610:intron | 35.0% | |
| ATTGCTTTACAGGCGAAATA+TGG | - | tig0022468:27313-27332 | Msa1400610:CDS | 35.0% | |
| TGTGGATGAGAATAATCGAT+TGG | - | tig0022468:27363-27382 | Msa1400610:CDS | 35.0% | |
| ! | TTGAGATATGTTGATGAGGA+TGG | - | tig0022468:27457-27476 | Msa1400610:CDS | 35.0% |
| TGTTTCAAATTCTGTGCTAC+AGG | - | tig0022468:28002-28021 | Msa1400610:intron | 35.0% | |
| AGTTTGGGAAATTGAATCAG+TGG | + | tig0022468:28088-28107 | None:intergenic | 35.0% | |
| ! | ACTGATTCAATTTCCCAAAC+TGG | - | tig0022468:28087-28106 | Msa1400610:intron | 35.0% |
| ! | ACAGGTTGAGTCTAAAATTG+CGG | - | tig0022468:28185-28204 | Msa1400610:CDS | 35.0% |
| ! | TTTACGTTAGTGGATGAGTA+AGG | + | tig0022468:28249-28268 | None:intergenic | 35.0% |
| TGGTACTCTATTTACGTTAG+TGG | + | tig0022468:28259-28278 | None:intergenic | 35.0% | |
| !! | CTATTGACTGTCCATTTTCT+GGG | - | tig0022468:28397-28416 | Msa1400610:CDS | 35.0% |
| ATTGAATGGCATGTTTCACA+AGG | - | tig0022468:28503-28522 | Msa1400610:CDS | 35.0% | |
| TTGAATGGCATGTTTCACAA+GGG | - | tig0022468:28504-28523 | Msa1400610:CDS | 35.0% | |
| ! | AAAGAAGTGTACTCACACTT+TGG | + | tig0022468:28583-28602 | None:intergenic | 35.0% |
| ! | AAAATAGGTGGTGGTATCTT+TGG | + | tig0022468:28888-28907 | None:intergenic | 35.0% |
| !!! | CCTGTTTTAAAAATAGGTGG+TGG | + | tig0022468:28897-28916 | None:intergenic | 35.0% |
| !!! | CCACCACCTATTTTTAAAAC+AGG | - | tig0022468:28894-28913 | Msa1400610:intron | 35.0% |
| !!! | GGTCCTGTTTTAAAAATAGG+TGG | + | tig0022468:28900-28919 | None:intergenic | 35.0% |
| CAAAGTCTAAGCTAGATAGT+CGG | - | tig0022468:28934-28953 | Msa1400610:CDS | 35.0% | |
| ATCTTTGTGAATGCAGTAGA+TGG | + | tig0022468:29002-29021 | None:intergenic | 35.0% | |
| CAACAGGTAAAACAAACCTA+GGG | + | tig0022468:29180-29199 | None:intergenic | 35.0% | |
| TCAACAGGTAAAACAAACCT+AGG | + | tig0022468:29181-29200 | None:intergenic | 35.0% | |
| TATGTATCTACCAGGTAACT+GGG | + | tig0022468:29307-29326 | None:intergenic | 35.0% | |
| ATATGTATCTACCAGGTAAC+TGG | + | tig0022468:29308-29327 | None:intergenic | 35.0% | |
| CAGTATGATATGTATCTACC+AGG | + | tig0022468:29315-29334 | None:intergenic | 35.0% | |
| CTGGTAGATACATATCATAC+TGG | - | tig0022468:29313-29332 | Msa1400610:CDS | 35.0% | |
| GTAGATACATATCATACTGG+AGG | - | tig0022468:29316-29335 | Msa1400610:CDS | 35.0% | |
| ATACATATCATACTGGAGGA+TGG | - | tig0022468:29320-29339 | Msa1400610:CDS | 35.0% | |
| TCTCTCTCTGGACATAAATT+TGG | - | tig0022468:29345-29364 | Msa1400610:CDS | 35.0% | |
| ATAAATTTGGCCAACGTGTT+TGG | - | tig0022468:29358-29377 | Msa1400610:CDS | 35.0% | |
| TAAATTTGGCCAACGTGTTT+GGG | - | tig0022468:29359-29378 | Msa1400610:CDS | 35.0% | |
| !! | TCAAGTATGATAGTGGAAGA+GGG | + | tig0022468:29489-29508 | None:intergenic | 35.0% |
| !! | TTCAAGTATGATAGTGGAAG+AGG | + | tig0022468:29490-29509 | None:intergenic | 35.0% |
| TCTTCCACTATCATACTTGA+AGG | - | tig0022468:29489-29508 | Msa1400610:CDS | 35.0% | |
| ! | TCATTTTATGATAGCTCGCA+AGG | - | tig0022468:29532-29551 | Msa1400610:CDS | 35.0% |
| !! | AAATGGTTGATAAGGAACAG+AGG | - | tig0022468:29689-29708 | Msa1400610:CDS | 35.0% |
| ACAAAGGTAGCTTCATTTGT+AGG | + | tig0022468:29736-29755 | None:intergenic | 35.0% | |
| ACAAATGAAGCTACCTTTGT+CGG | - | tig0022468:29736-29755 | Msa1400610:CDS | 35.0% | |
| !! | TACCCCATTATTGATTTCTC+TGG | - | tig0022468:29808-29827 | Msa1400610:CDS | 35.0% |
| TGCCAGAGAAATCAATAATG+GGG | + | tig0022468:29813-29832 | None:intergenic | 35.0% | |
| GTGCCAGAGAAATCAATAAT+GGG | + | tig0022468:29814-29833 | None:intergenic | 35.0% | |
| TGTGCCAGAGAAATCAATAA+TGG | + | tig0022468:29815-29834 | None:intergenic | 35.0% | |
| AAGCACAGATAATGATCTTG+TGG | - | tig0022468:30034-30053 | Msa1400610:CDS | 35.0% | |
| AGATAATGATCTTGTGGAAG+AGG | - | tig0022468:30040-30059 | Msa1400610:CDS | 35.0% | |
| !! | GCAGGTTGATTTAAACAAAG+AGG | - | tig0022468:30097-30116 | Msa1400610:CDS | 35.0% |
| GAGAATGACAGATTACAATC+TGG | - | tig0022468:30124-30143 | Msa1400610:CDS | 35.0% | |
| ! | AAGCATCAAACGTGTTGTTA+TGG | - | tig0022468:30811-30830 | Msa1400610:intron | 35.0% |
| AACACTAAATAATCGCTGCT+AGG | - | tig0022468:30909-30928 | Msa1400610:intron | 35.0% | |
| CCACAAAAAAAGATCAAGCA+AGG | + | tig0022468:30957-30976 | None:intergenic | 35.0% | |
| !!! | CCTTGCTTGATCTTTTTTTG+TGG | - | tig0022468:30954-30973 | Msa1400610:five_prime_UTR | 35.0% |
| GGTTGCAAATCAAGATAGAA+TGG | + | tig0022468:31110-31129 | None:intergenic | 35.0% | |
| ! | AAGAAGAAGCTTTAGCGTAC+CGG | + | tig0022468:26409-26428 | None:intergenic | 40.0% |
| GCTTTCCTTCTTCGTATCTA+TGG | - | tig0022468:26544-26563 | Msa1400610:three_prime_UTR | 40.0% | |
| GGATTCTTCTCTCGTTATCA+AGG | - | tig0022468:26565-26584 | Msa1400610:three_prime_UTR | 40.0% | |
| AGGGGAAAATTGAGATCGAT+CGG | + | tig0022468:26593-26612 | None:intergenic | 40.0% | |
| !! | TGCACTGGTTGTGGTTAATT+AGG | - | tig0022468:26679-26698 | Msa1400610:CDS | 40.0% |
| TCATGCACACTCCTAATTGA+AGG | - | tig0022468:27020-27039 | Msa1400610:intron | 40.0% | |
| ATTGAAGACAAGGATCCAGT+AGG | - | tig0022468:27143-27162 | Msa1400610:intron | 40.0% | |
| GATTGGATCTTAACATGGCT+GGG | - | tig0022468:27380-27399 | Msa1400610:CDS | 40.0% | |
| AAGTTAGATTCGCATCAGCA+GGG | + | tig0022468:27438-27457 | None:intergenic | 40.0% | |
| AAAGTTAGATTCGCATCAGC+AGG | + | tig0022468:27439-27458 | None:intergenic | 40.0% | |
| GTCCAGATGATCAATCATTC+TGG | - | tig0022468:27556-27575 | Msa1400610:CDS | 40.0% | |
| CACCAGAATGATTGATCATC+TGG | + | tig0022468:27561-27580 | None:intergenic | 40.0% | |
| AGACAGGAGGATATGTCAAA+GGG | + | tig0022468:27633-27652 | None:intergenic | 40.0% | |
| ! | TCAGCAATATTTGCTAGCAC+TGG | + | tig0022468:27760-27779 | None:intergenic | 40.0% |
| CAGTCTATTCTAAACCCTCA+AGG | - | tig0022468:27799-27818 | Msa1400610:CDS | 40.0% | |
| GGTGGTACAAGCTCAAAAAA+CGG | - | tig0022468:27838-27857 | Msa1400610:CDS | 40.0% | |
| TTAGGAGTGACAGATTCACT+GGG | + | tig0022468:27868-27887 | None:intergenic | 40.0% | |
| TTTAGGAGTGACAGATTCAC+TGG | + | tig0022468:27869-27888 | None:intergenic | 40.0% | |
| TCTGTCACTCCTAAAGCAAA+AGG | - | tig0022468:27874-27893 | Msa1400610:CDS | 40.0% | |
| ACTAGATCTAGCATAGTCAC+TGG | + | tig0022468:27935-27954 | None:intergenic | 40.0% | |
| AGTGACTATGCTAGATCTAG+TGG | - | tig0022468:27934-27953 | Msa1400610:CDS | 40.0% | |
| ACATTCCCAGGAGATCTTAA+GGG | + | tig0022468:27970-27989 | None:intergenic | 40.0% | |
| AACATTCCCAGGAGATCTTA+AGG | + | tig0022468:27971-27990 | None:intergenic | 40.0% | |
| TTCAAATTCTGTGCTACAGG+AGG | - | tig0022468:28005-28024 | Msa1400610:intron | 40.0% | |
| CACAGTAGATTGTCCAGTTT+GGG | + | tig0022468:28103-28122 | None:intergenic | 40.0% | |
| TCACAGTAGATTGTCCAGTT+TGG | + | tig0022468:28104-28123 | None:intergenic | 40.0% | |
| TACTGTGAAATCCCCTTACT+GGG | - | tig0022468:28116-28135 | Msa1400610:CDS | 40.0% | |
| ! | CAGGTTGAGTCTAAAATTGC+GGG | - | tig0022468:28186-28205 | Msa1400610:CDS | 40.0% |
| TACCCTTGTCATCACTAACA+GGG | + | tig0022468:28296-28315 | None:intergenic | 40.0% | |
| TTACCCTTGTCATCACTAAC+AGG | + | tig0022468:28297-28316 | None:intergenic | 40.0% | |
| GAAACCTAAAGTAGGGTTCT+TGG | + | tig0022468:28370-28389 | None:intergenic | 40.0% | |
| !! | GAGCACTGAAACCTAAAGTA+GGG | + | tig0022468:28377-28396 | None:intergenic | 40.0% |
| CCAGAAAATGGACAGTCAAT+AGG | + | tig0022468:28399-28418 | None:intergenic | 40.0% | |
| !! | CCTATTGACTGTCCATTTTC+TGG | - | tig0022468:28396-28415 | Msa1400610:CDS | 40.0% |
| AGAGTATGTGTCCCAGAAAA+TGG | + | tig0022468:28411-28430 | None:intergenic | 40.0% | |
| GAAATGCGAAAGTTTCCTAG+AGG | + | tig0022468:28450-28469 | None:intergenic | 40.0% | |
| TGAATGGCATGTTTCACAAG+GGG | - | tig0022468:28505-28524 | Msa1400610:CDS | 40.0% | |
| TGTGGAGTGTATCCAATAAC+CGG | - | tig0022468:28543-28562 | Msa1400610:CDS | 40.0% | |
| ! | TTTGGATTTGAAACGAGGTC+CGG | + | tig0022468:28565-28584 | None:intergenic | 40.0% |
| ! | CACACTTTGGATTTGAAACG+AGG | + | tig0022468:28570-28589 | None:intergenic | 40.0% |
| TCTGCACCATAAAAGAGAGA+AGG | + | tig0022468:28860-28879 | None:intergenic | 40.0% | |
| !! | GCTAGATAGTCGGTTCATTT+TGG | - | tig0022468:28944-28963 | Msa1400610:CDS | 40.0% |
| TGTCATAGACGGAACAATGA+TGG | - | tig0022468:28974-28993 | Msa1400610:CDS | 40.0% | |
| CTACTGCATTCACAAAGATC+TGG | - | tig0022468:29003-29022 | Msa1400610:CDS | 40.0% | |
| ! | CAAACAAGTTGAGTTCCCTT+GGG | + | tig0022468:29059-29078 | None:intergenic | 40.0% |
| ! | GGAACTCAACTTGTTTGGAT+TGG | - | tig0022468:29062-29081 | Msa1400610:CDS | 40.0% |
| ! | ACTCAACTTGTTTGGATTGG+AGG | - | tig0022468:29065-29084 | Msa1400610:CDS | 40.0% |
| AACCTCTAAGTCAACAGAGA+GGG | + | tig0022468:29108-29127 | None:intergenic | 40.0% | |
| AAACCTCTAAGTCAACAGAG+AGG | + | tig0022468:29109-29128 | None:intergenic | 40.0% | |
| GGTAAAACAAACCTAGGGAA+AGG | + | tig0022468:29175-29194 | None:intergenic | 40.0% | |
| ! | AGGGTATTCAGAAGATCAAC+AGG | + | tig0022468:29196-29215 | None:intergenic | 40.0% |
| ATGTATCTACCAGGTAACTG+GGG | + | tig0022468:29306-29325 | None:intergenic | 40.0% | |
| ACTGTCATCCTACCTGTATA+AGG | + | tig0022468:29386-29405 | None:intergenic | 40.0% | |
| TCGACCTTCAAGTATGATAG+TGG | + | tig0022468:29496-29515 | None:intergenic | 40.0% | |
| CTGAACTTGAATATTCCCCT+TGG | - | tig0022468:29556-29575 | Msa1400610:CDS | 40.0% | |
| ! | TTGAATATTCCCCTTGGTGT+TGG | - | tig0022468:29562-29581 | Msa1400610:CDS | 40.0% |
| ATTTGATTCACAGGTTCAGG+TGG | + | tig0022468:29673-29692 | None:intergenic | 40.0% | |
| ACCTGAACCTGTGAATCAAA+TGG | - | tig0022468:29672-29691 | Msa1400610:CDS | 40.0% | |
| ACCATTTGATTCACAGGTTC+AGG | + | tig0022468:29676-29695 | None:intergenic | 40.0% | |
| AAGGTGACACTGAAATTGCA+GGG | + | tig0022468:29777-29796 | None:intergenic | 40.0% | |
| ATGGGGTAAGAAATAGACGA+AGG | + | tig0022468:29796-29815 | None:intergenic | 40.0% | |
| CTTAAAGAGCTTGAGGCTAT+GGG | - | tig0022468:30068-30087 | Msa1400610:CDS | 40.0% | |
| CAGTCAATTGATGAACTCTG+CGG | - | tig0022468:30149-30168 | Msa1400610:CDS | 40.0% | |
| ATACCGTGACAGTGTGTTAT+TGG | + | tig0022468:30576-30595 | None:intergenic | 40.0% | |
| AGGTGATGATAGGGATGAAA+TGG | + | tig0022468:30613-30632 | None:intergenic | 40.0% | |
| CAGCAAAGTAGGTGATGATA+GGG | + | tig0022468:30622-30641 | None:intergenic | 40.0% | |
| GGATTATGAAGCAGCAAAGT+AGG | + | tig0022468:30633-30652 | None:intergenic | 40.0% | |
| ! | ACTGATGGGGTATTAATGCA+GGG | - | tig0022468:30740-30759 | Msa1400610:intron | 40.0% |
| !! | TCCTGTTTGTTTCTGTGTCA+CGG | + | tig0022468:30769-30788 | None:intergenic | 40.0% |
| AGGCTACTGATGAAAAACGA+TGG | - | tig0022468:30788-30807 | Msa1400610:intron | 40.0% | |
| GGATTTACTCAATGGAGAGT+AGG | - | tig0022468:30832-30851 | Msa1400610:intron | 40.0% | |
| ACGAAGAAGGAAAGCGAAGA+AGG | + | tig0022468:26539-26558 | None:intergenic | 45.0% | |
| !! | GTTGTTTCATGCACTGGTTG+TGG | - | tig0022468:26670-26689 | Msa1400610:CDS | 45.0% |
| AATTGCTAGTGAGGCATGCT+GGG | - | tig0022468:26904-26923 | Msa1400610:intron | 45.0% | |
| CGATTGGATCTTAACATGGC+TGG | - | tig0022468:27379-27398 | Msa1400610:CDS | 45.0% | |
| ATCTTAACATGGCTGGGTTG+AGG | - | tig0022468:27386-27405 | Msa1400610:CDS | 45.0% | |
| ! | TCTTAACATGGCTGGGTTGA+GGG | - | tig0022468:27387-27406 | Msa1400610:CDS | 45.0% |
| ! | TCTGGTGCTAAATCTGATGC+TGG | - | tig0022468:27574-27593 | Msa1400610:CDS | 45.0% |
| GACAGGAGGATATGTCAAAG+GGG | + | tig0022468:27632-27651 | None:intergenic | 45.0% | |
| GAGACAGGAGGATATGTCAA+AGG | + | tig0022468:27634-27653 | None:intergenic | 45.0% | |
| ! | TTTAGGAAAGGGTCTGAGAC+AGG | + | tig0022468:27649-27668 | None:intergenic | 45.0% |
| GAATAAAGAGCCTCGCGTAT+TGG | + | tig0022468:27709-27728 | None:intergenic | 45.0% | |
| CTAGCATAGTCACTGGCATT+GGG | + | tig0022468:27928-27947 | None:intergenic | 45.0% | |
| TCTAGCATAGTCACTGGCAT+TGG | + | tig0022468:27929-27948 | None:intergenic | 45.0% | |
| CATTCCCAGGAGATCTTAAG+GGG | + | tig0022468:27969-27988 | None:intergenic | 45.0% | |
| CTACTGTGAAATCCCCTTAC+TGG | - | tig0022468:28115-28134 | Msa1400610:CDS | 45.0% | |
| ACTGTGAAATCCCCTTACTG+GGG | - | tig0022468:28117-28136 | Msa1400610:CDS | 45.0% | |
| CTTGTACCAATTGCAACAGG+AGG | + | tig0022468:28144-28163 | None:intergenic | 45.0% | |
| GAGCTTGTACCAATTGCAAC+AGG | + | tig0022468:28147-28166 | None:intergenic | 45.0% | |
| AAAAAACGATGCCAGTCGAC+AGG | - | tig0022468:28167-28186 | Msa1400610:CDS | 45.0% | |
| TTTAGACTCAACCTGTCGAC+TGG | + | tig0022468:28181-28200 | None:intergenic | 45.0% | |
| TAAAATTGCGGGAGTTTCCC+CGG | - | tig0022468:28197-28216 | Msa1400610:CDS | 45.0% | |
| AGGAACATTGAGATCAACCG+GGG | + | tig0022468:28217-28236 | None:intergenic | 45.0% | |
| GAGGAACATTGAGATCAACC+GGG | + | tig0022468:28218-28237 | None:intergenic | 45.0% | |
| GGAGGAACATTGAGATCAAC+CGG | + | tig0022468:28219-28238 | None:intergenic | 45.0% | |
| GATGAGTAAGGATTGCATGG+AGG | + | tig0022468:28237-28256 | None:intergenic | 45.0% | |
| GTGGATGAGTAAGGATTGCA+TGG | + | tig0022468:28240-28259 | None:intergenic | 45.0% | |
| AGTCCCTGTTAGTGATGACA+AGG | - | tig0022468:28290-28309 | Msa1400610:intron | 45.0% | |
| GTCCCTGTTAGTGATGACAA+GGG | - | tig0022468:28291-28310 | Msa1400610:intron | 45.0% | |
| GCAACCAAGAACCCTACTTT+AGG | - | tig0022468:28363-28382 | Msa1400610:intron | 45.0% | |
| !! | GGAGCACTGAAACCTAAAGT+AGG | + | tig0022468:28378-28397 | None:intergenic | 45.0% |
| ATGCGAAAGTTTCCTAGAGG+AGG | + | tig0022468:28447-28466 | None:intergenic | 45.0% | |
| ! | TGAGCGTGGCTCCTTTTAAA+TGG | + | tig0022468:28474-28493 | None:intergenic | 45.0% |
| GCTCACTCTGATGCATTGAA+TGG | - | tig0022468:28489-28508 | Msa1400610:CDS | 45.0% | |
| GAATGGCATGTTTCACAAGG+GGG | - | tig0022468:28506-28525 | Msa1400610:CDS | 45.0% | |
| ACACTCCACAACCATCACAA+CGG | + | tig0022468:28533-28552 | None:intergenic | 45.0% | |
| TTGAAACGAGGTCCGGTTAT+TGG | + | tig0022468:28558-28577 | None:intergenic | 45.0% | |
| GACTTTGCATGCTTCGAAAG+AGG | + | tig0022468:28921-28940 | None:intergenic | 45.0% | |
| CTGCATTCACAAAGATCTGG+CGG | - | tig0022468:29006-29025 | Msa1400610:CDS | 45.0% | |
| ! | CCAAACAAGTTGAGTTCCCT+TGG | + | tig0022468:29060-29079 | None:intergenic | 45.0% |
| ! | CCAAGGGAACTCAACTTGTT+TGG | - | tig0022468:29057-29076 | Msa1400610:CDS | 45.0% |
| TTGAATATCCCAGGTTCCTG+AGG | - | tig0022468:29230-29249 | Msa1400610:CDS | 45.0% | |
| ACGTCAAGCTCTTTCTCTAC+AGG | + | tig0022468:29264-29283 | None:intergenic | 45.0% | |
| GTATAAGGACCCAAACACGT+TGG | + | tig0022468:29371-29390 | None:intergenic | 45.0% | |
| ACGTGTTTGGGTCCTTATAC+AGG | - | tig0022468:29371-29390 | Msa1400610:CDS | 45.0% | |
| GTTTGGGTCCTTATACAGGT+AGG | - | tig0022468:29375-29394 | Msa1400610:CDS | 45.0% | |
| TTCAGAGCTACCAACACCAA+GGG | + | tig0022468:29575-29594 | None:intergenic | 45.0% | |
| ATTCAGAGCTACCAACACCA+AGG | + | tig0022468:29576-29595 | None:intergenic | 45.0% | |
| !! | TTGGTGTTGGTAGCTCTGAA+TGG | - | tig0022468:29575-29594 | Msa1400610:CDS | 45.0% |
| !!! | AGGTGGAGCATTGGGATTTT+GGG | + | tig0022468:29656-29675 | None:intergenic | 45.0% |
| TAAGGAACAGAGGCAGGAAT+TGG | - | tig0022468:29699-29718 | Msa1400610:CDS | 45.0% | |
| AAGGAACAGAGGCAGGAATT+GGG | - | tig0022468:29700-29719 | Msa1400610:CDS | 45.0% | |
| AGGTGACACTGAAATTGCAG+GGG | + | tig0022468:29776-29795 | None:intergenic | 45.0% | |
| GAAGGTGACACTGAAATTGC+AGG | + | tig0022468:29778-29797 | None:intergenic | 45.0% | |
| TTGAAGTTTGCGGAATGGCT+GGG | + | tig0022468:29989-30008 | None:intergenic | 45.0% | |
| CAGAGTTGAAGTTTGCGGAA+TGG | + | tig0022468:29994-30013 | None:intergenic | 45.0% | |
| CATTCCGCAAACTTCAACTC+TGG | - | tig0022468:29992-30011 | Msa1400610:CDS | 45.0% | |
| GCATCCAGAGTTGAAGTTTG+CGG | + | tig0022468:29999-30018 | None:intergenic | 45.0% | |
| CCATAGCCTCAAGCTCTTTA+AGG | + | tig0022468:30070-30089 | None:intergenic | 45.0% | |
| CCTTAAAGAGCTTGAGGCTA+TGG | - | tig0022468:30067-30086 | Msa1400610:CDS | 45.0% | |
| AACTCTGCGGTGTTCTTGAT+TGG | - | tig0022468:30162-30181 | Msa1400610:intron | 45.0% | |
| ACTCTGCGGTGTTCTTGATT+GGG | - | tig0022468:30163-30182 | Msa1400610:intron | 45.0% | |
| GTGCCAATAACACACTGTCA+CGG | - | tig0022468:30570-30589 | Msa1400610:intron | 45.0% | |
| ATGAAATGGAGCACACGGAT+TGG | + | tig0022468:30599-30618 | None:intergenic | 45.0% | |
| TAGGGATGAAATGGAGCACA+CGG | + | tig0022468:30604-30623 | None:intergenic | 45.0% | |
| GCAGCAAAGTAGGTGATGAT+AGG | + | tig0022468:30623-30642 | None:intergenic | 45.0% | |
| ! | GACTGATGGGGTATTAATGC+AGG | - | tig0022468:30739-30758 | Msa1400610:intron | 45.0% |
| TCCGTGACACAGAAACAAAC+AGG | - | tig0022468:30765-30784 | Msa1400610:intron | 45.0% | |
| GTGACACAGAAACAAACAGG+AGG | - | tig0022468:30768-30787 | Msa1400610:intron | 45.0% | |
| TAGCGTTAATAGCGGCTCAC+CGG | - | tig0022468:26387-26406 | Msa1400610:three_prime_UTR | 50.0% | |
| GAATTGCTAGTGAGGCATGC+TGG | - | tig0022468:26903-26922 | Msa1400610:intron | 50.0% | |
| CGAAATATGGAGATGCCCTC+AGG | - | tig0022468:27326-27345 | Msa1400610:CDS | 50.0% | |
| ! | ACGAACATTGAAGCGCCTGA+GGG | + | tig0022468:27344-27363 | None:intergenic | 50.0% |
| ! | TGTTGATGAGGATGGCGACT+TGG | - | tig0022468:27465-27484 | Msa1400610:CDS | 50.0% |
| !! | TGGCGACTTGGTGAATCTTG+TGG | - | tig0022468:27477-27496 | Msa1400610:CDS | 50.0% |
| GGTGCTAAATCTGATGCTGG+TGG | - | tig0022468:27577-27596 | Msa1400610:CDS | 50.0% | |
| AGGAGGATATGTCAAAGGGG+TGG | + | tig0022468:27629-27648 | None:intergenic | 50.0% | |
| TGATGCTTTGCAAGCTCTGC+CGG | - | tig0022468:27681-27700 | Msa1400610:intron | 50.0% | |
| !! | CAACGTGAGATTGGCCTTGA+GGG | + | tig0022468:27816-27835 | None:intergenic | 50.0% |
| TACCACCAGCAACGTGAGAT+TGG | + | tig0022468:27825-27844 | None:intergenic | 50.0% | |
| ! | GACTGCGGACCTTTTGCTTT+AGG | + | tig0022468:27886-27905 | None:intergenic | 50.0% |
| GAATCCACACATGGAGACTG+CGG | + | tig0022468:27901-27920 | None:intergenic | 50.0% | |
| TTGGGAGCAGAATCCACACA+TGG | + | tig0022468:27910-27929 | None:intergenic | 50.0% | |
| CCATCCCCTTAAGATCTCCT+GGG | - | tig0022468:27962-27981 | Msa1400610:CDS | 50.0% | |
| GGAACTTGTCTCGAAGATGC+AGG | + | tig0022468:28057-28076 | None:intergenic | 50.0% | |
| CTGTGAAATCCCCTTACTGG+GGG | - | tig0022468:28118-28137 | Msa1400610:CDS | 50.0% | |
| CTAACAGGGACTGCTGATGA+AGG | + | tig0022468:28282-28301 | None:intergenic | 50.0% | |
| CATTCAATGCCACCTCCTCT+AGG | - | tig0022468:28432-28451 | Msa1400610:CDS | 50.0% | |
| CGAAAGTTTCCTAGAGGAGG+TGG | + | tig0022468:28444-28463 | None:intergenic | 50.0% | |
| TCAATGCATCAGAGTGAGCG+TGG | + | tig0022468:28488-28507 | None:intergenic | 50.0% | |
| GGGAACGAAAAGATGCAGGA+CGG | + | tig0022468:28742-28761 | None:intergenic | 50.0% | |
| CTTGGGGAACGAAAAGATGC+AGG | + | tig0022468:28746-28765 | None:intergenic | 50.0% | |
| GCAACAATGGCACTTCAGTG+TGG | - | tig0022468:29033-29052 | Msa1400610:CDS | 50.0% | |
| !! | CTCCCTCTCTGTTGACTTAG+AGG | - | tig0022468:29103-29122 | Msa1400610:CDS | 50.0% |
| ATATCCCAGGTTCCTGAGGA+CGG | - | tig0022468:29234-29253 | Msa1400610:CDS | 50.0% | |
| GAAGGTCGATGCATCTCTCA+AGG | - | tig0022468:29507-29526 | Msa1400610:CDS | 50.0% | |
| TCAGAGCTACCAACACCAAG+GGG | + | tig0022468:29574-29593 | None:intergenic | 50.0% | |
| !! | TTGGTAGCTCTGAATGGCCT+CGG | - | tig0022468:29581-29600 | Msa1400610:CDS | 50.0% |
| !!! | GGTGGAGCATTGGGATTTTG+GGG | + | tig0022468:29655-29674 | None:intergenic | 50.0% |
| !!! | CAGGTGGAGCATTGGGATTT+TGG | + | tig0022468:29657-29676 | None:intergenic | 50.0% |
| ! | ACAGGTTCAGGTGGAGCATT+GGG | + | tig0022468:29664-29683 | None:intergenic | 50.0% |
| !! | GGTTGATAAGGAACAGAGGC+AGG | - | tig0022468:29693-29712 | Msa1400610:CDS | 50.0% |
| TGAAGTTTGCGGAATGGCTG+GGG | + | tig0022468:29988-30007 | None:intergenic | 50.0% | |
| GTTGAAGTTTGCGGAATGGC+TGG | + | tig0022468:29990-30009 | None:intergenic | 50.0% | |
| GGCTCTCCTTAAAGAGCTTG+AGG | - | tig0022468:30061-30080 | Msa1400610:CDS | 50.0% | |
| TGAGGCTATGGGTTTCAAGC+AGG | - | tig0022468:30079-30098 | Msa1400610:CDS | 50.0% | |
| TCGTGTAGCTCTTCAAGGAG+AGG | + | tig0022468:30191-30210 | None:intergenic | 50.0% | |
| CCATCTCGTGTAGCTCTTCA+AGG | + | tig0022468:30196-30215 | None:intergenic | 50.0% | |
| CCTTGAAGAGCTACACGAGA+TGG | - | tig0022468:30193-30212 | Msa1400610:intron | 50.0% | |
| ! | CACGAACATTGAAGCGCCTG+AGG | + | tig0022468:27345-27364 | None:intergenic | 55.0% |
| CAGGCGCTTCAATGTTCGTG+TGG | - | tig0022468:27345-27364 | Msa1400610:CDS | 55.0% | |
| !! | TCTGATGCTGGTGGCTCTAG+TGG | - | tig0022468:27586-27605 | Msa1400610:intron | 55.0% |
| ! | AGGAAAGGGTCTGAGACAGG+AGG | + | tig0022468:27646-27665 | None:intergenic | 55.0% |
| !! | GCAACGTGAGATTGGCCTTG+AGG | + | tig0022468:27817-27836 | None:intergenic | 55.0% |
| CAAGGCCAATCTCACGTTGC+TGG | - | tig0022468:27817-27836 | Msa1400610:CDS | 55.0% | |
| GCCATCCCCTTAAGATCTCC+TGG | - | tig0022468:27961-27980 | Msa1400610:CDS | 55.0% | |
| CCCAGGAGATCTTAAGGGGA+TGG | + | tig0022468:27965-27984 | None:intergenic | 55.0% | |
| ACAGGGACTGCTGATGAAGG+TGG | + | tig0022468:28279-28298 | None:intergenic | 55.0% | |
| ! | ATCTGGCGGATGCGCAACAA+TGG | - | tig0022468:29020-29039 | Msa1400610:CDS | 55.0% |
| TACACCGTCCTCAGGAACCT+GGG | + | tig0022468:29241-29260 | None:intergenic | 55.0% | |
| TCTACAGGTACACCGTCCTC+AGG | + | tig0022468:29249-29268 | None:intergenic | 55.0% | |
| ! | TTTAGAGCGCCCCAGTTACC+TGG | - | tig0022468:29294-29313 | Msa1400610:CDS | 55.0% |
| TGGAGGATGGCATCTCTCTC+TGG | - | tig0022468:29333-29352 | Msa1400610:CDS | 55.0% | |
| CACAGGTTCAGGTGGAGCAT+TGG | + | tig0022468:29665-29684 | None:intergenic | 55.0% | |
| TGAAATTGCAGGGGCTGAGG+CGG | + | tig0022468:29767-29786 | None:intergenic | 55.0% | |
| CACTGAAATTGCAGGGGCTG+AGG | + | tig0022468:29770-29789 | None:intergenic | 55.0% | |
| AGAGAAAGAGGGAGCAGCTG+GGG | + | tig0022468:29839-29858 | None:intergenic | 55.0% | |
| CAGAGAAAGAGGGAGCAGCT+GGG | + | tig0022468:29840-29859 | None:intergenic | 55.0% | |
| GGGGATGTGCCAGAGAAAGA+GGG | + | tig0022468:29939-29958 | None:intergenic | 55.0% | |
| CTCTTTCTCTGGCACATCCC+CGG | - | tig0022468:29938-29957 | Msa1400610:CDS | 55.0% | |
| !! | GATGCTGGTGGCTCTAGTGG+AGG | - | tig0022468:27589-27608 | Msa1400610:intron | 60.0% |
| !! | GGCTCTAGTGGAGGTGCTAG+TGG | - | tig0022468:27598-27617 | Msa1400610:intron | 60.0% |
| !! | AGAGCCTCGCGTATTGGCTC+CGG | + | tig0022468:27703-27722 | None:intergenic | 60.0% |
| GGCCAATCTCACGTTGCTGG+TGG | - | tig0022468:27820-27839 | Msa1400610:CDS | 60.0% | |
| AGGTCCGCAGTCTCCATGTG+TGG | - | tig0022468:27894-27913 | Msa1400610:CDS | 60.0% | |
| AACAGGAGGCCCCCAGTAAG+GGG | + | tig0022468:28130-28149 | None:intergenic | 60.0% | |
| CAACAGGAGGCCCCCAGTAA+GGG | + | tig0022468:28131-28150 | None:intergenic | 60.0% | |
| TGGGGGCCTCCTGTTGCAAT+TGG | - | tig0022468:28135-28154 | Msa1400610:CDS | 60.0% | |
| CACAAGGGGGTCCGTTGTGA+TGG | - | tig0022468:28519-28538 | Msa1400610:CDS | 60.0% | |
| GGGGTCCGTTGTGATGGTTG+TGG | - | tig0022468:28525-28544 | Msa1400610:CDS | 60.0% | |
| TGGCACTTCAGTGTGGCCCA+AGG | - | tig0022468:29040-29059 | Msa1400610:CDS | 60.0% | |
| GGCACTTCAGTGTGGCCCAA+GGG | - | tig0022468:29041-29060 | Msa1400610:CDS | 60.0% | |
| GTACACCGTCCTCAGGAACC+TGG | + | tig0022468:29242-29261 | None:intergenic | 60.0% | |
| CCAGAGAAAGAGGGAGCAGC+TGG | + | tig0022468:29841-29860 | None:intergenic | 60.0% | |
| CCAGCTGCTCCCTCTTTCTC+TGG | - | tig0022468:29838-29857 | Msa1400610:CDS | 60.0% | |
| AGAGAAAGAGGGAGCAGCCG+GGG | + | tig0022468:29869-29888 | None:intergenic | 60.0% | |
| CAGAGAAAGAGGGAGCAGCC+GGG | + | tig0022468:29870-29889 | None:intergenic | 60.0% | |
| CCAGAGAAAGAGGGAGCAGC+CGG | + | tig0022468:29841-29860 | None:intergenic | 60.0% | |
| GGGGCTGTGCCAGAGAAAGA+GGG | + | tig0022468:29880-29899 | None:intergenic | 60.0% | |
| CTCTTTCTCTGGCACAGCCC+CGG | - | tig0022468:29879-29898 | Msa1400610:CDS | 60.0% | |
| AGAGAAAGAGGGAGCAGCCG+GGG | + | tig0022468:29869-29888 | None:intergenic | 60.0% | |
| CAGAGAAAGAGGGAGCAGCC+GGG | + | tig0022468:29870-29889 | None:intergenic | 60.0% | |
| CCAGAGAAAGAGGGAGCAGC+CGG | + | tig0022468:29841-29860 | None:intergenic | 60.0% | |
| CGGGGATGGCCAGAGAAAGA+GGG | + | tig0022468:29910-29929 | None:intergenic | 60.0% | |
| CCTCTTTCTCTGGCCATCCC+CGG | - | tig0022468:29908-29927 | Msa1400610:CDS | 60.0% | |
| AGAGAAAGAGGGAGCAGCCG+GGG | + | tig0022468:29869-29888 | None:intergenic | 60.0% | |
| CAGAGAAAGAGGGAGCAGCC+GGG | + | tig0022468:29870-29889 | None:intergenic | 60.0% | |
| CCAGAGAAAGAGGGAGCAGC+CGG | + | tig0022468:29841-29860 | None:intergenic | 60.0% | |
| CGGGGATGTGCCAGAGAAAG+AGG | + | tig0022468:29940-29959 | None:intergenic | 60.0% | |
| AGAGAAAGAGGGACCAGCCG+GGG | + | tig0022468:29958-29977 | None:intergenic | 60.0% | |
| CAGAGAAAGAGGGACCAGCC+GGG | + | tig0022468:29959-29978 | None:intergenic | 60.0% | |
| CCAGAGAAAGAGGGACCAGC+CGG | + | tig0022468:29960-29979 | None:intergenic | 60.0% | |
| TCTGCCGGAGCCAATACGCG+AGG | - | tig0022468:27696-27715 | Msa1400610:intron | 65.0% | |
| GCAACAGGAGGCCCCCAGTA+AGG | + | tig0022468:28132-28151 | None:intergenic | 65.0% | |
| GGGGCTGCGCCAGAGAAAGA+GGG | + | tig0022468:29850-29869 | None:intergenic | 65.0% | |
| CTCTTTCTCTGGCGCAGCCC+CGG | - | tig0022468:29849-29868 | Msa1400610:CDS | 65.0% | |
| CCGGCTGCTCCCTCTTTCTC+TGG | - | tig0022468:29868-29887 | Msa1400610:CDS | 65.0% | |
| CGGGGCTGTGCCAGAGAAAG+AGG | + | tig0022468:29881-29900 | None:intergenic | 65.0% | |
| CCGGCTGCTCCCTCTTTCTC+TGG | - | tig0022468:29868-29887 | Msa1400610:CDS | 65.0% | |
| CCGGGGATGGCCAGAGAAAG+AGG | + | tig0022468:29911-29930 | None:intergenic | 65.0% | |
| AAAGAGGGAGCAGCCGGGGA+TGG | + | tig0022468:29924-29943 | None:intergenic | 65.0% | |
| CCGGCTGCTCCCTCTTTCTC+TGG | - | tig0022468:29868-29887 | Msa1400610:CDS | 65.0% | |
| TTCTCTGGCACATCCCCGGC+TGG | - | tig0022468:29942-29961 | Msa1400610:CDS | 65.0% | |
| ! | CCGGCTGGTCCCTCTTTCTC+TGG | - | tig0022468:29957-29976 | Msa1400610:CDS | 65.0% |
| GGGGCTGCGCCAGAGAAAGA+GGG | + | tig0022468:29850-29869 | None:intergenic | 65.0% | |
| TGGGGCTGCGCCAGAGAAAG+AGG | + | tig0022468:29970-29989 | None:intergenic | 65.0% | |
| TGAGGCGGCAGGGCCGACAA+AGG | + | tig0022468:29752-29771 | None:intergenic | 70.0% | |
| TTGCAGGGGCTGAGGCGGCA+GGG | + | tig0022468:29762-29781 | None:intergenic | 70.0% | |
| ATTGCAGGGGCTGAGGCGGC+AGG | + | tig0022468:29763-29782 | None:intergenic | 70.0% | |
| CGGGGCTGCGCCAGAGAAAG+AGG | + | tig0022468:29851-29870 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022468 | gene | 26346 | 31151 | 26346 | ID=Msa1400610;Name=Msa1400610 |
| tig0022468 | mRNA | 26346 | 31151 | 26346 | ID=Msa1400610-mRNA-1;Parent=Msa1400610;Name=Msa1400610-mRNA-1;_AED=0.25;_eAED=0.25;_QI=217|0.85|0.75|1|1|1|8|298|835 |
| tig0022468 | exon | 26346 | 26736 | 26346 | ID=Msa1400610-mRNA-1:exon:17771;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 27283 | 27601 | 27283 | ID=Msa1400610-mRNA-1:exon:17770;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 27700 | 27986 | 27700 | ID=Msa1400610-mRNA-1:exon:17769;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 28105 | 28254 | 28105 | ID=Msa1400610-mRNA-1:exon:17768;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 28373 | 28618 | 28373 | ID=Msa1400610-mRNA-1:exon:17767;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 28704 | 28830 | 28704 | ID=Msa1400610-mRNA-1:exon:17766;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 28911 | 30172 | 28911 | ID=Msa1400610-mRNA-1:exon:17765;Parent=Msa1400610-mRNA-1 |
| tig0022468 | exon | 30911 | 31151 | 30911 | ID=Msa1400610-mRNA-1:exon:17764;Parent=Msa1400610-mRNA-1 |
| tig0022468 | five_prime_UTR | 30935 | 31151 | 30935 | ID=Msa1400610-mRNA-1:five_prime_utr;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 30911 | 30934 | 30911 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 28911 | 30172 | 28911 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 28704 | 28830 | 28704 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 28373 | 28618 | 28373 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 28105 | 28254 | 28105 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 27700 | 27986 | 27700 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 27283 | 27601 | 27283 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | CDS | 26644 | 26736 | 26644 | ID=Msa1400610-mRNA-1:cds;Parent=Msa1400610-mRNA-1 |
| tig0022468 | three_prime_UTR | 26346 | 26643 | 26346 | ID=Msa1400610-mRNA-1:three_prime_utr;Parent=Msa1400610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
