AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0306210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306210 MtrunA17_Chr6g0459071 99.673 306 1 0 1 306 1 306 0.0 630
Msa0306210 MtrunA17_Chr6g0459091 93.160 307 20 1 1 306 1 307 0.0 592
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306210 AT3G27240.1 87.255 306 39 0 1 306 2 307 0.0 510
Msa0306210 AT5G40810.1 86.275 306 42 0 1 306 2 307 0.0 509
Msa0306210 AT5G40810.2 92.692 260 19 0 47 306 1 260 1.56e-168 468

Find 109 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGGTGTCTCAGGTCTTT+TGG 0.163244 2_3:+64823811 Msa0306210:CDS
TTTATATATGAAACTGTTAT+TGG 0.165636 2_3:+64826753 Msa0306210:three_prime_UTR
TTAAGAGCCCTTGCTTTAAT+TGG 0.175578 2_3:+64823788 Msa0306210:CDS
TTCTGTAACTCCAACGAATT+TGG 0.201397 2_3:-64826391 None:intergenic
ACTTGCAGATGGGATTTAAA+TGG 0.252277 2_3:+64826195 Msa0306210:intron
TGGATATTGCTGTATAATAA+AGG 0.298145 2_3:+64826859 Msa0306210:three_prime_UTR
GAGTGTCAGAATGTTCTTAT+TGG 0.313681 2_3:+64826618 Msa0306210:three_prime_UTR
TAAAATGCATCTCACATATA+TGG 0.326001 2_3:-64826453 None:intergenic
ATGGATATTTGTACTTTCAT+TGG 0.329694 2_3:+64826214 Msa0306210:CDS
AGAATGTTCTTATTGGAAAC+TGG 0.336407 2_3:+64826625 Msa0306210:three_prime_UTR
ATGGCTCCACCAGGGAAATA+AGG 0.352039 2_3:-64825848 None:intergenic
TATGTGTTTGCTCTCCTAAC+TGG 0.353553 2_3:+64825200 Msa0306210:CDS
TTAGACATTTGTTAAGTGAT+TGG 0.359787 2_3:+64826553 Msa0306210:three_prime_UTR
AATTAAAGCAAGGGCTCTTA+AGG 0.362156 2_3:-64823786 None:intergenic
GAATTTGGCATGACGAGAAT+TGG 0.369422 2_3:-64826376 None:intergenic
CTACATACACTTATATAATC+TGG 0.372083 2_3:+64826526 Msa0306210:three_prime_UTR
ACAACATAATAAAATTGAAT+TGG 0.376817 2_3:-64826663 None:intergenic
TAGACATTTGTTAAGTGATT+GGG 0.377081 2_3:+64826554 Msa0306210:three_prime_UTR
AACATCTCACCCTCATCATT+GGG 0.377350 2_3:-64824961 None:intergenic
GTCTCAAAGAAAGACGGTTC+TGG 0.381617 2_3:+64823746 Msa0306210:CDS
TTAATTGGAGCTGGTGTCTC+AGG 0.388344 2_3:+64823803 Msa0306210:CDS
TTCTTACCAGAGAATGAGAT+TGG 0.400483 2_3:-64821775 None:intergenic
AAAGCGATCACTGAGTTTAC+CGG 0.403522 2_3:-64824992 None:intergenic
AAACATCTCACCCTCATCAT+TGG 0.411590 2_3:-64824962 None:intergenic
TTTGATATCATACCGTGATT+TGG 0.414012 2_3:+64824873 Msa0306210:CDS
CATTACAATCCTTATTTCCC+TGG 0.414300 2_3:+64825839 Msa0306210:CDS
GCAGCTGATTCATTTGCATA+TGG 0.415455 2_3:-64825021 None:intergenic
GCGCCATCATTAAGCATCTT+AGG 0.416554 2_3:-64825878 None:intergenic
AGTACCTGAGCTTCGGTAGC+AGG 0.443562 2_3:-64825923 None:intergenic
AAAGACGGTTCTGGCTCTAC+TGG 0.446521 2_3:+64823755 Msa0306210:CDS
GCCCTTGCTTTAATTGGAGC+TGG 0.448077 2_3:+64823794 Msa0306210:CDS
CCGCATACTATCGTCGTCTT+CGG 0.462299 2_3:+64826249 Msa0306210:CDS
GAAACTCCAATCTCATTCTC+TGG 0.472075 2_3:+64821769 Msa0306210:CDS
TGAGATGGAAGAGCGAAAAC+TGG 0.475157 2_3:+64826098 Msa0306210:CDS
GATACTTATACCAACATACT+TGG 0.476088 2_3:-64826788 None:intergenic
TCAGCTGCTAGGTTTGCTAA+TGG 0.483837 2_3:+64825036 Msa0306210:CDS
ATACTTATACCAACATACTT+GGG 0.486119 2_3:-64826787 None:intergenic
TATCAAAGACATGGAATGGC+AGG 0.507429 2_3:-64824857 None:intergenic
TCTCGTCATGCCAAATTCGT+TGG 0.509698 2_3:+64826381 Msa0306210:three_prime_UTR
TCATAAAAGTACCTGAGCTT+CGG 0.512637 2_3:-64825930 None:intergenic
GGCATGGCAATGGCTCCACC+AGG 0.514815 2_3:-64825857 None:intergenic
TTGGTAATAAGACTTAGATC+AGG 0.519781 2_3:-64825072 None:intergenic
ACCGTCTTTCTTTGAGACAA+TGG 0.522311 2_3:-64823741 None:intergenic
AGAAGAAGAGGTAAAGGCTA+TGG 0.524696 2_3:+64824912 Msa0306210:CDS
AATACACATGTTTGAGAAGA+GGG 0.527196 2_3:-64826484 None:intergenic
GTACCTGAGCTTCGGTAGCA+GGG 0.529146 2_3:-64825922 None:intergenic
GGCTATGGCAGCTGAGATTG+AGG 0.530766 2_3:+64824927 Msa0306210:CDS
ATATAAGTGTATGTAGGTCC+TGG 0.537436 2_3:-64826519 None:intergenic
ATGATATCAAAGACATGGAA+TGG 0.537539 2_3:-64824861 None:intergenic
GCTGAGATTGAGGTGGAAGA+TGG 0.539723 2_3:+64824937 Msa0306210:CDS
GATTCATTTGCATATGGCTG+AGG 0.541130 2_3:-64825015 None:intergenic
TACCCCTGCTACCGAAGCTC+AGG 0.543312 2_3:+64825919 Msa0306210:CDS
ATAATAATGTAGATCAGAGA+AGG 0.546231 2_3:+64825812 Msa0306210:intron
ACAGTCTGAACAGAGATGGC+TGG 0.550214 2_3:+64821719 None:intergenic
TTACACAGAAGAAGAGGTAA+AGG 0.552168 2_3:+64824906 Msa0306210:CDS
GAATATACCGAAATACCAGC+AGG 0.552545 2_3:-64825236 None:intergenic
TACAATCCTTATTTCCCTGG+TGG 0.554688 2_3:+64825842 Msa0306210:CDS
AAGCGATCACTGAGTTTACC+GGG 0.554889 2_3:-64824991 None:intergenic
TCGCATCTCCACACTATCCA+TGG 0.559094 2_3:+64823876 Msa0306210:CDS
TGTTCTTAAGTCTCGCAAGT+TGG 0.563450 2_3:+64826277 Msa0306210:CDS
AAGACTTAGATCAGGAGGAT+AGG 0.563590 2_3:-64825064 None:intergenic
TTGGGCAGCAGAACCTGAGA+TGG 0.563754 2_3:+64826083 Msa0306210:CDS
CAGATTATATAAGTGTATGT+AGG 0.566337 2_3:-64826525 None:intergenic
AGGATTCCCTCGTGAGGCCA+TGG 0.566894 2_3:-64823893 None:intergenic
ATCATTAAGCATCTTAGGCA+TGG 0.575465 2_3:-64825873 None:intergenic
ATGCAAATGAATCAGCTGCT+AGG 0.576296 2_3:+64825025 Msa0306210:CDS
GGTGAGATGTTTACACGCCC+CGG 0.579989 2_3:+64824973 Msa0306210:CDS
CACCAGCTCCAATTAAAGCA+AGG 0.593167 2_3:-64823796 None:intergenic
AAATACACATGTTTGAGAAG+AGG 0.595794 2_3:-64826485 None:intergenic
TCAGCTGATGAAGCTGAGCA+TGG 0.598104 2_3:+64823851 Msa0306210:CDS
AATGAAGACCCCAAGTATGT+TGG 0.598413 2_3:+64826778 Msa0306210:three_prime_UTR
GTGTATGTAGGTCCTGGAGG+AGG 0.598701 2_3:-64826513 None:intergenic
TCCATTGTCTCAAAGAAAGA+CGG 0.601122 2_3:+64823740 Msa0306210:CDS
CATACTATCGTCGTCTTCGG+TGG 0.604083 2_3:+64826252 Msa0306210:CDS
GTAATAAGACTTAGATCAGG+AGG 0.606361 2_3:-64825069 None:intergenic
ACCAGCTCCAATTAAAGCAA+GGG 0.607014 2_3:-64823795 None:intergenic
ATCCACAGTCTGAACAGAGA+TGG 0.609865 2_3:+64821715 None:intergenic
TGTTGCTTACACAGAAGAAG+AGG 0.612813 2_3:+64824900 Msa0306210:CDS
TCGTGAGGCCATGGATAGTG+TGG 0.617512 2_3:-64823884 None:intergenic
ATATCATACCGTGATTTGGT+TGG 0.618625 2_3:+64824877 Msa0306210:CDS
AAGCATCTTAGGCATGGCAA+TGG 0.619124 2_3:-64825867 None:intergenic
TACTTATACCAACATACTTG+GGG 0.620209 2_3:-64826786 None:intergenic
GAGACAATGGATGATACAGA+AGG 0.620313 2_3:-64823728 None:intergenic
TACCTGAGCTTCGGTAGCAG+GGG 0.625058 2_3:-64825921 None:intergenic
GGCGCTGTTGAATATGAAGA+TGG 0.625884 2_3:+64825896 Msa0306210:CDS
ACACTATCCATGGCCTCACG+AGG 0.626043 2_3:+64823886 Msa0306210:CDS
ACGGTATGATATCAAAGACA+TGG 0.629932 2_3:-64824866 None:intergenic
ATGCCTAAGATGCTTAATGA+TGG 0.630986 2_3:+64825875 Msa0306210:CDS
GGAAGATGGCCCCAATGATG+AGG 0.644119 2_3:+64824951 Msa0306210:CDS
GCTGCTAGGTTTGCTAATGG+AGG 0.646946 2_3:+64825039 Msa0306210:CDS
AATATACCGAAATACCAGCA+GGG 0.651584 2_3:-64825235 None:intergenic
ATATACCGAAATACCAGCAG+GGG 0.655558 2_3:-64825234 None:intergenic
AAGCAACACCAACCAAATCA+CGG 0.657890 2_3:-64824885 None:intergenic
ATGGATAGTGTGGAGATGCG+AGG 0.659382 2_3:-64823874 None:intergenic
GTCTGAACAGAGATGGCTGG+AGG 0.660770 2_3:+64821722 None:intergenic
CACTATCCATGGCCTCACGA+GGG 0.662222 2_3:+64823887 Msa0306210:CDS
GAAGATGGCCCCAATGATGA+GGG 0.664245 2_3:+64824952 Msa0306210:CDS
ACATCTCACCCTCATCATTG+GGG 0.664508 2_3:-64824960 None:intergenic
TAAGTGTATGTAGGTCCTGG+AGG 0.685220 2_3:-64826516 None:intergenic
GTGTATAAACTTGATGACCA+CGG 0.686663 2_3:-64824822 None:intergenic
TATACCGAAATACCAGCAGG+GGG 0.699409 2_3:-64825233 None:intergenic
AAGCGTGATCATATGAACTG+AGG 0.699683 2_3:-64823913 None:intergenic
TATGGCAGCTGAGATTGAGG+TGG 0.700807 2_3:+64824930 Msa0306210:CDS
GCATGGCAATGGCTCCACCA+GGG 0.715609 2_3:-64825856 None:intergenic
GAACTGAGGATTCCCTCGTG+AGG 0.723147 2_3:-64823899 None:intergenic
CCGAAGACGACGATAGTATG+CGG 0.728381 2_3:-64826249 None:intergenic
AGCGATCACTGAGTTTACCG+GGG 0.742025 2_3:-64824990 None:intergenic
TGTATGGACAGGATTCGCCG+TGG 0.758824 2_3:+64824805 Msa0306210:intron
ATACCGAAATACCAGCAGGG+GGG 0.810875 2_3:-64825232 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTATTTATAGAAATAAA+AGG - chr2_3:64824639-64824658 None:intergenic 10.0%
!! TAATAATTATCTATCAATTT+AGG + chr2_3:64825990-64826009 Msa0306210:intron 10.0%
!!! CTAATTTTATACGTAATTAT+GGG - chr2_3:64822958-64822977 None:intergenic 15.0%
!! AGAATAAATTTAAACTCTAA+AGG - chr2_3:64823276-64823295 None:intergenic 15.0%
!! TTAATACTATAAATAGGAAT+CGG + chr2_3:64823315-64823334 Msa0306210:intron 15.0%
!!! GTGAATATTTTTTATTGTTA+TGG + chr2_3:64823592-64823611 Msa0306210:intron 15.0%
!!! AATATTTTTTATTGTTATGG+TGG + chr2_3:64823595-64823614 Msa0306210:intron 15.0%
!!! GCATTAAATATTTTACAAAT+TGG - chr2_3:64825458-64825477 None:intergenic 15.0%
!! ATTTATAAAAAGATTACTGT+TGG + chr2_3:64826342-64826361 Msa0306210:three_prime_UTR 15.0%
!! ACAACATAATAAAATTGAAT+TGG - chr2_3:64826666-64826685 None:intergenic 15.0%
!! TTTATATATGAAACTGTTAT+TGG + chr2_3:64826753-64826772 Msa0306210:three_prime_UTR 15.0%
!!! TATAAAAGTATCATGAATAG+AGG - chr2_3:64821807-64821826 None:intergenic 20.0%
!!! ATTTTAAATCCCATAAGATA+AGG - chr2_3:64821855-64821874 None:intergenic 20.0%
!! AAGATAAATTCGAAAATGAA+AGG + chr2_3:64822298-64822317 Msa0306210:intron 20.0%
!! ATTAGGTTCTATCATTTAAT+GGG + chr2_3:64822413-64822432 Msa0306210:intron 20.0%
!! GAAAACAAAACAAAACAATT+TGG - chr2_3:64822458-64822477 None:intergenic 20.0%
!!! TCTATTTTATTCTGGTAAAT+AGG + chr2_3:64822842-64822861 Msa0306210:intron 20.0%
!!! TCTTATTTAACTACTTAGTA+TGG + chr2_3:64822916-64822935 Msa0306210:intron 20.0%
!!! CCTAATTTTATACGTAATTA+TGG - chr2_3:64822959-64822978 None:intergenic 20.0%
!! CCATAATTACGTATAAAATT+AGG + chr2_3:64822956-64822975 Msa0306210:intron 20.0%
!! ACTGAAAAAAATTAGGTAAT+TGG + chr2_3:64823035-64823054 Msa0306210:intron 20.0%
!! CTGAAAAAAATTAGGTAATT+GGG + chr2_3:64823036-64823055 Msa0306210:intron 20.0%
!! GTAAATTAAACATTTACCTA+TGG - chr2_3:64824059-64824078 None:intergenic 20.0%
!! GCTGAAAAAAATTAAAACTA+GGG - chr2_3:64824100-64824119 None:intergenic 20.0%
!! TGGTTAAAAACTTAAAATCT+TGG + chr2_3:64824179-64824198 Msa0306210:intron 20.0%
!! AGAATAAAACAAAGCAATAA+AGG - chr2_3:64824672-64824691 None:intergenic 20.0%
!! AGTTCAGATTAAATATATGA+TGG - chr2_3:64824731-64824750 None:intergenic 20.0%
!!! ATATATTAGCTGATTTTGTA+TGG + chr2_3:64824789-64824808 Msa0306210:intron 20.0%
!! TTCATACTATATAAAACCTA+AGG - chr2_3:64825126-64825145 None:intergenic 20.0%
!!! CTGTATTTAGTCTTAAAAAA+AGG - chr2_3:64825271-64825290 None:intergenic 20.0%
!!! CATTTAAAAGCACAATTTTT+TGG - chr2_3:64825367-64825386 None:intergenic 20.0%
!! TATTGAAAGAAAATCATCTA+TGG - chr2_3:64825507-64825526 None:intergenic 20.0%
!! AAATAAAAAACAAAGCTTGA+AGG - chr2_3:64826326-64826345 None:intergenic 20.0%
!! TTATCTTCAGTAAAGAAAAA+AGG + chr2_3:64826588-64826607 Msa0306210:three_prime_UTR 20.0%
!! TATCTTCAGTAAAGAAAAAA+GGG + chr2_3:64826589-64826608 Msa0306210:three_prime_UTR 20.0%
!! GAATGGAAAATGAATAAAAA+TGG + chr2_3:64826839-64826858 Msa0306210:three_prime_UTR 20.0%
!!! GTGTTTTTCAACAATTATTG+AGG + chr2_3:64821744-64821763 Msa0306210:CDS 25.0%
!!! TTTTTCAACAATTATTGAGG+AGG + chr2_3:64821747-64821766 Msa0306210:CDS 25.0%
!!! ATTTTGTTATACATATGCGA+GGG + chr2_3:64821915-64821934 Msa0306210:intron 25.0%
!! CAACAGTTTTACTGATAAAT+TGG - chr2_3:64822037-64822056 None:intergenic 25.0%
! CAATTTATCAGTAAAACTGT+TGG + chr2_3:64822035-64822054 Msa0306210:intron 25.0%
! ATGATAAACTAGTAATGCAA+GGG - chr2_3:64822176-64822195 None:intergenic 25.0%
! AATGATAAACTAGTAATGCA+AGG - chr2_3:64822177-64822196 None:intergenic 25.0%
! CATTAAATGATAGAACCTAA+TGG - chr2_3:64822414-64822433 None:intergenic 25.0%
! CATTAGGTTCTATCATTTAA+TGG + chr2_3:64822412-64822431 Msa0306210:intron 25.0%
! TGTCTTAATTTACTCTCAAA+TGG + chr2_3:64822517-64822536 Msa0306210:intron 25.0%
!! ACAGTATGTCTATTTTATTC+TGG + chr2_3:64822834-64822853 Msa0306210:intron 25.0%
! AGTAGTTAAATAAGATCATG+AGG - chr2_3:64822911-64822930 None:intergenic 25.0%
!!! TACCTAATTTTTTTCAGTCA+GGG - chr2_3:64823033-64823052 None:intergenic 25.0%
!!! TTACCTAATTTTTTTCAGTC+AGG - chr2_3:64823034-64823053 None:intergenic 25.0%
!! TATCCAAGTTTAACTTTAGA+TGG + chr2_3:64823446-64823465 Msa0306210:intron 25.0%
!! AATCCATCTAAAGTTAAACT+TGG - chr2_3:64823452-64823471 None:intergenic 25.0%
! AATAAGCTTATCATGAAAGA+TGG - chr2_3:64823551-64823570 None:intergenic 25.0%
!! ATTGTCATTGATTGTCATAT+TGG + chr2_3:64823568-64823587 Msa0306210:intron 25.0%
! TATTAGAAAAAGACATGATC+AGG - chr2_3:64823684-64823703 None:intergenic 25.0%
!!! AGTTTTTCCTTCGTTTTTTT+TGG + chr2_3:64823951-64823970 Msa0306210:intron 25.0%
! GTACGTTTAAGCAAAATAAA+AGG - chr2_3:64823983-64824002 None:intergenic 25.0%
! GGCTGAAAAAAATTAAAACT+AGG - chr2_3:64824101-64824120 None:intergenic 25.0%
!!! GTTTTAATTTTTTTCAGCCT+TGG + chr2_3:64824102-64824121 Msa0306210:intron 25.0%
! TTAAGAGAAATAGAGAAAGT+GGG + chr2_3:64824464-64824483 Msa0306210:intron 25.0%
! TCAGATTAAATATATGATGG+AGG - chr2_3:64824728-64824747 None:intergenic 25.0%
! AAATCATCTATGGTATCAAA+AGG - chr2_3:64825497-64825516 None:intergenic 25.0%
! TTCGATATAATACTTTCATG+TGG + chr2_3:64825543-64825562 Msa0306210:intron 25.0%
! ATATAATACTTTCATGTGGA+TGG + chr2_3:64825547-64825566 Msa0306210:intron 25.0%
! ATAATAATGTAGATCAGAGA+AGG + chr2_3:64825812-64825831 Msa0306210:intron 25.0%
!!! TTTTATTTGTTGTTGCAGAT+GGG + chr2_3:64826036-64826055 Msa0306210:intron 25.0%
! ATGGATATTTGTACTTTCAT+TGG + chr2_3:64826214-64826233 Msa0306210:CDS 25.0%
! TAAAATGCATCTCACATATA+TGG - chr2_3:64826456-64826475 None:intergenic 25.0%
! CAGATTATATAAGTGTATGT+AGG - chr2_3:64826528-64826547 None:intergenic 25.0%
! CTACATACACTTATATAATC+TGG + chr2_3:64826526-64826545 Msa0306210:three_prime_UTR 25.0%
!! TTAGACATTTGTTAAGTGAT+TGG + chr2_3:64826553-64826572 Msa0306210:three_prime_UTR 25.0%
!! TAGACATTTGTTAAGTGATT+GGG + chr2_3:64826554-64826573 Msa0306210:three_prime_UTR 25.0%
!!! TAAGTGATTGGGTTTATTTT+TGG + chr2_3:64826565-64826584 Msa0306210:three_prime_UTR 25.0%
! AGTAAAGAAAAAAGGGAAAA+GGG + chr2_3:64826596-64826615 Msa0306210:three_prime_UTR 25.0%
! ATACTTATACCAACATACTT+GGG - chr2_3:64826790-64826809 None:intergenic 25.0%
!!! CTGAATATTTCTTTTGAGAA+TGG + chr2_3:64826822-64826841 Msa0306210:three_prime_UTR 25.0%
! ATGTTTCTGACCTTATCTTA+TGG + chr2_3:64821842-64821861 Msa0306210:intron 30.0%
! TGTTTCTGACCTTATCTTAT+GGG + chr2_3:64821843-64821862 Msa0306210:intron 30.0%
!! GATTTTGTTATACATATGCG+AGG + chr2_3:64821914-64821933 Msa0306210:intron 30.0%
! AAATCAGAAGTTGTCTTTTC+TGG + chr2_3:64821938-64821957 Msa0306210:intron 30.0%
TCAACAAGCATTATAAGACA+AGG - chr2_3:64821998-64822017 None:intergenic 30.0%
! AATTTTGCAAAAGAGTTTCC+AGG + chr2_3:64822115-64822134 Msa0306210:intron 30.0%
TATCTATGACTGTTAGATGA+GGG - chr2_3:64822144-64822163 None:intergenic 30.0%
ATATCTATGACTGTTAGATG+AGG - chr2_3:64822145-64822164 None:intergenic 30.0%
TTAGTGTCAACTAAACTCTT+GGG - chr2_3:64822223-64822242 None:intergenic 30.0%
ATTAGTGTCAACTAAACTCT+TGG - chr2_3:64822224-64822243 None:intergenic 30.0%
GAATTAAGCTTGATCATAGT+TGG - chr2_3:64822361-64822380 None:intergenic 30.0%
GTTCTATCATTTAATGGGAT+TGG + chr2_3:64822418-64822437 Msa0306210:intron 30.0%
!! CAAATCATAAGGTATTGCTA+CGG - chr2_3:64822593-64822612 None:intergenic 30.0%
TTGTAGAGATGCAAATCATA+AGG - chr2_3:64822604-64822623 None:intergenic 30.0%
ATTGCAATTGTAGTCATGAT+AGG - chr2_3:64822628-64822647 None:intergenic 30.0%
TAAAATAGACATACTGTTGC+TGG - chr2_3:64822831-64822850 None:intergenic 30.0%
AGAAGATACTAGATTAGTAG+CGG - chr2_3:64822884-64822903 None:intergenic 30.0%
TATACGTAATTATGGGTGAA+AGG - chr2_3:64822951-64822970 None:intergenic 30.0%
AAAATTAGGTAATTGGGAGT+TGG + chr2_3:64823042-64823061 Msa0306210:intron 30.0%
!! TGTTCTAGAGTAACATGATT+TGG - chr2_3:64823228-64823247 None:intergenic 30.0%
!! GTAAATTCTTTTGACTGTTC+AGG + chr2_3:64823374-64823393 Msa0306210:intron 30.0%
! TTTTATAACAATGTGTCCCT+CGG + chr2_3:64823653-64823672 Msa0306210:intron 30.0%
GAATTGTCCAAAAAAAACGA+AGG - chr2_3:64823961-64823980 None:intergenic 30.0%
! CAAAACCATGAAAGCATAAT+AGG - chr2_3:64824141-64824160 None:intergenic 30.0%
!! ATTATGCTTTCATGGTTTTG+AGG + chr2_3:64824141-64824160 Msa0306210:intron 30.0%
! ATAGGACTCATCCTATTTTA+AGG + chr2_3:64824302-64824321 Msa0306210:intron 30.0%
!!! CTATTTTAAGGCTTTCTTCT+GGG + chr2_3:64824314-64824333 Msa0306210:intron 30.0%
GTTAAGAGAAATAGAGAAAG+TGG + chr2_3:64824463-64824482 Msa0306210:intron 30.0%
! GAATTTGTGTTATTGTTGAG+TGG + chr2_3:64824503-64824522 Msa0306210:intron 30.0%
AGAGAACATTAGTTCCTTTA+AGG + chr2_3:64824569-64824588 Msa0306210:intron 30.0%
ATGATATCAAAGACATGGAA+TGG - chr2_3:64824864-64824883 None:intergenic 30.0%
TTTGATATCATACCGTGATT+TGG + chr2_3:64824873-64824892 Msa0306210:CDS 30.0%
! TTGGTAATAAGACTTAGATC+AGG - chr2_3:64825075-64825094 None:intergenic 30.0%
GCAGAAAATTGACATTACTT+TGG - chr2_3:64825094-64825113 None:intergenic 30.0%
TTTCTGCTAGTAATTTCCTT+AGG + chr2_3:64825107-64825126 Msa0306210:intron 30.0%
AAGAATGCAAGTTACTGTAA+TGG - chr2_3:64825294-64825313 None:intergenic 30.0%
! TTGTGCTTTTAAATGTTGTG+TGG + chr2_3:64825372-64825391 Msa0306210:intron 30.0%
! ATTTTACAAATTGGTGTGCA+GGG - chr2_3:64825449-64825468 None:intergenic 30.0%
! TATTTTACAAATTGGTGTGC+AGG - chr2_3:64825450-64825469 None:intergenic 30.0%
GAAACATTAATATTGTGTGC+TGG - chr2_3:64825590-64825609 None:intergenic 30.0%
TTGTCAATCATGCACATATA+TGG + chr2_3:64825640-64825659 Msa0306210:intron 30.0%
!! TGCTCTTGATCTTTTGTTTA+TGG + chr2_3:64825778-64825797 Msa0306210:intron 30.0%
!!! CTTTTATTTGTTGTTGCAGA+TGG + chr2_3:64826035-64826054 Msa0306210:intron 30.0%
!! TTTATTTGTTGTTGCAGATG+GGG + chr2_3:64826037-64826056 Msa0306210:intron 30.0%
!!! ATGTTGTGTCATTTTTGTCT+TGG + chr2_3:64826064-64826083 Msa0306210:CDS 30.0%
!!! TGTTGTGTCATTTTTGTCTT+GGG + chr2_3:64826065-64826084 Msa0306210:CDS 30.0%
CTGATAGAAGACGAAAATAA+AGG - chr2_3:64826131-64826150 None:intergenic 30.0%
AATACACATGTTTGAGAAGA+GGG - chr2_3:64826487-64826506 None:intergenic 30.0%
AAATACACATGTTTGAGAAG+AGG - chr2_3:64826488-64826507 None:intergenic 30.0%
CAGTAAAGAAAAAAGGGAAA+AGG + chr2_3:64826595-64826614 Msa0306210:three_prime_UTR 30.0%
AGAATGTTCTTATTGGAAAC+TGG + chr2_3:64826625-64826644 Msa0306210:three_prime_UTR 30.0%
TACTTATACCAACATACTTG+GGG - chr2_3:64826789-64826808 None:intergenic 30.0%
GATACTTATACCAACATACT+TGG - chr2_3:64826791-64826810 None:intergenic 30.0%
TTCTTACCAGAGAATGAGAT+TGG - chr2_3:64821778-64821797 None:intergenic 35.0%
! GATTTAAAATTGAGACCCCT+AGG + chr2_3:64821865-64821884 Msa0306210:intron 35.0%
ATCTATGACTGTTAGATGAG+GGG - chr2_3:64822143-64822162 None:intergenic 35.0%
TGATCAAGCTTAATTCCGTT+AGG + chr2_3:64822365-64822384 Msa0306210:intron 35.0%
AAAACTGTGCAAGCTACAAA+TGG - chr2_3:64822704-64822723 None:intergenic 35.0%
!!! CTAATTTTTTTCAGTCAGGG+AGG - chr2_3:64823030-64823049 None:intergenic 35.0%
CTCCCTGACTGAAAAAAATT+AGG + chr2_3:64823028-64823047 Msa0306210:intron 35.0%
! CTAGAGTAACATGATTTGGA+GGG - chr2_3:64823224-64823243 None:intergenic 35.0%
! TCTAGAGTAACATGATTTGG+AGG - chr2_3:64823225-64823244 None:intergenic 35.0%
!!! TGTGTTTGCGAATTGGTTTT+TGG - chr2_3:64823253-64823272 None:intergenic 35.0%
AACTCAGTTGTAGTACTAAG+AGG - chr2_3:64823501-64823520 None:intergenic 35.0%
TAGTACTACAACTGAGTTCT+TGG + chr2_3:64823503-64823522 Msa0306210:intron 35.0%
TCCATTGTCTCAAAGAAAGA+CGG + chr2_3:64823740-64823759 Msa0306210:CDS 35.0%
AATTAAAGCAAGGGCTCTTA+AGG - chr2_3:64823789-64823808 None:intergenic 35.0%
TTAAGAGCCCTTGCTTTAAT+TGG + chr2_3:64823788-64823807 Msa0306210:CDS 35.0%
CACTTATGATCACAAATGCA+AGG - chr2_3:64824022-64824041 None:intergenic 35.0%
CTTGCATTTGTGATCATAAG+TGG + chr2_3:64824020-64824039 Msa0306210:intron 35.0%
GTCTTCCTATTATGCTTTCA+TGG + chr2_3:64824133-64824152 Msa0306210:intron 35.0%
CTAGCAAATATCGCAATACA+TGG - chr2_3:64824239-64824258 None:intergenic 35.0%
TCCTATCACAGGATCTATAA+CGG - chr2_3:64824288-64824307 None:intergenic 35.0%
CCAGAAGAAAGCCTTAAAAT+AGG - chr2_3:64824316-64824335 None:intergenic 35.0%
!!! CCTATTTTAAGGCTTTCTTC+TGG + chr2_3:64824313-64824332 Msa0306210:intron 35.0%
AGTTAGCACATCAGTTGTAT+AGG + chr2_3:64824419-64824438 Msa0306210:intron 35.0%
ACATCAGTTGTATAGGTTCA+TGG + chr2_3:64824426-64824445 Msa0306210:intron 35.0%
!! TTAGCTGATTTTGTATGGAC+AGG + chr2_3:64824794-64824813 Msa0306210:intron 35.0%
! GTGTATAAACTTGATGACCA+CGG - chr2_3:64824825-64824844 None:intergenic 35.0%
ACGGTATGATATCAAAGACA+TGG - chr2_3:64824869-64824888 None:intergenic 35.0%
!! ATATCATACCGTGATTTGGT+TGG + chr2_3:64824877-64824896 Msa0306210:CDS 35.0%
TTACACAGAAGAAGAGGTAA+AGG + chr2_3:64824906-64824925 Msa0306210:CDS 35.0%
GTAATAAGACTTAGATCAGG+AGG - chr2_3:64825072-64825091 None:intergenic 35.0%
AATATACCGAAATACCAGCA+GGG - chr2_3:64825238-64825257 None:intergenic 35.0%
ATTCTTCAGAAGTTGTCATG+TGG + chr2_3:64825308-64825327 Msa0306210:intron 35.0%
! CATTACAATCCTTATTTCCC+TGG + chr2_3:64825839-64825858 Msa0306210:CDS 35.0%
ATCATTAAGCATCTTAGGCA+TGG - chr2_3:64825876-64825895 None:intergenic 35.0%
ATGCCTAAGATGCTTAATGA+TGG + chr2_3:64825875-64825894 Msa0306210:CDS 35.0%
!! TCATAAAAGTACCTGAGCTT+CGG - chr2_3:64825933-64825952 None:intergenic 35.0%
ACTTGCAGATGGGATTTAAA+TGG + chr2_3:64826195-64826214 Msa0306210:intron 35.0%
TTCTGTAACTCCAACGAATT+TGG - chr2_3:64826394-64826413 None:intergenic 35.0%
ATATAAGTGTATGTAGGTCC+TGG - chr2_3:64826522-64826541 None:intergenic 35.0%
GAGTGTCAGAATGTTCTTAT+TGG + chr2_3:64826618-64826637 Msa0306210:three_prime_UTR 35.0%
GAAACTCCAATCTCATTCTC+TGG + chr2_3:64821769-64821788 Msa0306210:CDS 40.0%
GGATTAATGTCACGATTCTC+TGG + chr2_3:64822056-64822075 Msa0306210:intron 40.0%
TCAAGCTTAATTCCGTTAGG+TGG + chr2_3:64822368-64822387 Msa0306210:intron 40.0%
GCTAGTCATTTGATGCCATT+AGG + chr2_3:64822396-64822415 Msa0306210:intron 40.0%
!!! CTGTCCACCACTTTTTTCTT+TGG + chr2_3:64822481-64822500 Msa0306210:intron 40.0%
CATGCCAAAGAAAAAAGTGG+TGG - chr2_3:64822488-64822507 None:intergenic 40.0%
CCACATGCCAAAGAAAAAAG+TGG - chr2_3:64822491-64822510 None:intergenic 40.0%
!!! CCACTTTTTTCTTTGGCATG+TGG + chr2_3:64822488-64822507 Msa0306210:intron 40.0%
CTCTCAAATGGTCGTTATCA+AGG + chr2_3:64822529-64822548 Msa0306210:intron 40.0%
! TTACCGTAGTCCAGTAGTTT+TGG + chr2_3:64822664-64822683 Msa0306210:intron 40.0%
AAGCCAAAACTACTGGACTA+CGG - chr2_3:64822670-64822689 None:intergenic 40.0%
AGCTCATAAGCCAAAACTAC+TGG - chr2_3:64822677-64822696 None:intergenic 40.0%
! GGTAATTGGGAGTTGGATTT+TGG + chr2_3:64823049-64823068 Msa0306210:intron 40.0%
! AATTGGGAGTTGGATTTTGG+AGG + chr2_3:64823052-64823071 Msa0306210:intron 40.0%
! ATTGGGAGTTGGATTTTGGA+GGG + chr2_3:64823053-64823072 Msa0306210:intron 40.0%
! CTAAAGGTGTGTTTGCGAAT+TGG - chr2_3:64823260-64823279 None:intergenic 40.0%
! TGAGTTCTTGGCTCCAATTT+TGG + chr2_3:64823515-64823534 Msa0306210:intron 40.0%
TGGCATGCAGTAACCAAAAT+TGG - chr2_3:64823531-64823550 None:intergenic 40.0%
GAGACAATGGATGATACAGA+AGG - chr2_3:64823731-64823750 None:intergenic 40.0%
!! ACCGTCTTTCTTTGAGACAA+TGG - chr2_3:64823744-64823763 None:intergenic 40.0%
ACCAGCTCCAATTAAAGCAA+GGG - chr2_3:64823798-64823817 None:intergenic 40.0%
AAGCGTGATCATATGAACTG+AGG - chr2_3:64823916-64823935 None:intergenic 40.0%
TGGTTGTCAAAGTCAACCAT+AGG + chr2_3:64824040-64824059 Msa0306210:intron 40.0%
TAGGAAGACTAGATTCTCCA+AGG - chr2_3:64824122-64824141 None:intergenic 40.0%
TGAGGTGACATGATCTAACA+TGG + chr2_3:64824159-64824178 Msa0306210:intron 40.0%
AATAGGATGAGTCCTATCAC+AGG - chr2_3:64824299-64824318 None:intergenic 40.0%
! TTCTTGTTTGCTCTACACCT+CGG + chr2_3:64824360-64824379 Msa0306210:intron 40.0%
AGTTGTATAGGTTCATGGTG+TGG + chr2_3:64824431-64824450 Msa0306210:intron 40.0%
AGTGGGAAATGAATTGTGCA+AGG + chr2_3:64824481-64824500 Msa0306210:intron 40.0%
ATTGTTGAGTGGAGAGAGAA+AGG + chr2_3:64824514-64824533 Msa0306210:intron 40.0%
!! GAGAGAGAAAGGTATCAAGA+GGG + chr2_3:64824525-64824544 Msa0306210:intron 40.0%
CATAGAGCTAAGCTCCTTAA+AGG - chr2_3:64824586-64824605 None:intergenic 40.0%
!! CTTTAAGGAGCTTAGCTCTA+TGG + chr2_3:64824584-64824603 Msa0306210:intron 40.0%
TATCAAAGACATGGAATGGC+AGG - chr2_3:64824860-64824879 None:intergenic 40.0%
AAGCAACACCAACCAAATCA+CGG - chr2_3:64824888-64824907 None:intergenic 40.0%
! TGTTGCTTACACAGAAGAAG+AGG + chr2_3:64824900-64824919 Msa0306210:CDS 40.0%
AGAAGAAGAGGTAAAGGCTA+TGG + chr2_3:64824912-64824931 Msa0306210:CDS 40.0%
AACATCTCACCCTCATCATT+GGG - chr2_3:64824964-64824983 None:intergenic 40.0%
AAACATCTCACCCTCATCAT+TGG - chr2_3:64824965-64824984 None:intergenic 40.0%
AAAGCGATCACTGAGTTTAC+CGG - chr2_3:64824995-64825014 None:intergenic 40.0%
GATTCATTTGCATATGGCTG+AGG - chr2_3:64825018-64825037 None:intergenic 40.0%
! GCAGCTGATTCATTTGCATA+TGG - chr2_3:64825024-64825043 None:intergenic 40.0%
ATGCAAATGAATCAGCTGCT+AGG + chr2_3:64825025-64825044 Msa0306210:CDS 40.0%
AAGACTTAGATCAGGAGGAT+AGG - chr2_3:64825067-64825086 None:intergenic 40.0%
TATGTGTTTGCTCTCCTAAC+TGG + chr2_3:64825200-64825219 Msa0306210:CDS 40.0%
ATATACCGAAATACCAGCAG+GGG - chr2_3:64825237-64825256 None:intergenic 40.0%
GAATATACCGAAATACCAGC+AGG - chr2_3:64825239-64825258 None:intergenic 40.0%
AAATTGCTTGACCACCTGAT+GGG + chr2_3:64825331-64825350 Msa0306210:intron 40.0%
ATACTTTCATGTGGATGGCT+TGG + chr2_3:64825552-64825571 Msa0306210:intron 40.0%
AGTATTGTCACACGGATACA+AGG - chr2_3:64825759-64825778 None:intergenic 40.0%
TCAAGAGCAGTATTGTCACA+CGG - chr2_3:64825767-64825786 None:intergenic 40.0%
! TACAATCCTTATTTCCCTGG+TGG + chr2_3:64825842-64825861 Msa0306210:CDS 40.0%
! GGTACTTTTATGAGCTGATG+AGG + chr2_3:64825940-64825959 Msa0306210:intron 40.0%
ACATTGCTACTACTTGCAGA+TGG + chr2_3:64826184-64826203 Msa0306210:intron 40.0%
CATTGCTACTACTTGCAGAT+GGG + chr2_3:64826185-64826204 Msa0306210:intron 40.0%
TGTTCTTAAGTCTCGCAAGT+TGG + chr2_3:64826277-64826296 Msa0306210:CDS 40.0%
GAATTTGGCATGACGAGAAT+TGG - chr2_3:64826379-64826398 None:intergenic 40.0%
! TGTATTTTGTTACCTCCTCC+AGG + chr2_3:64826501-64826520 Msa0306210:three_prime_UTR 40.0%
AATGAAGACCCCAAGTATGT+TGG + chr2_3:64826778-64826797 Msa0306210:three_prime_UTR 40.0%
ATCCCTCAAAGTCTAGCCTA+GGG - chr2_3:64821884-64821903 None:intergenic 45.0%
! TAGGCTAGACTTTGAGGGAT+GGG + chr2_3:64821884-64821903 Msa0306210:intron 45.0%
!! GACTAGCTTAGTCCACCTAA+CGG - chr2_3:64822383-64822402 None:intergenic 45.0%
!! TAAGGTATTGCTACGGCATC+AGG - chr2_3:64822586-64822605 None:intergenic 45.0%
!! TTGGGAGTTGGATTTTGGAG+GGG + chr2_3:64823054-64823073 Msa0306210:intron 45.0%
!! GATTTTGGAGGGGAATGCTT+TGG + chr2_3:64823064-64823083 Msa0306210:intron 45.0%
ACATGATCAGGATCTTCCGA+GGG - chr2_3:64823672-64823691 None:intergenic 45.0%
GTCTCAAAGAAAGACGGTTC+TGG + chr2_3:64823746-64823765 Msa0306210:CDS 45.0%
CACCAGCTCCAATTAAAGCA+AGG - chr2_3:64823799-64823818 None:intergenic 45.0%
TTAATTGGAGCTGGTGTCTC+AGG + chr2_3:64823803-64823822 Msa0306210:CDS 45.0%
TCACGCTTCGTAAGTTTGAC+TGG + chr2_3:64823928-64823947 Msa0306210:intron 45.0%
GCCGTTATAGATCCTGTGAT+AGG + chr2_3:64824284-64824303 Msa0306210:intron 45.0%
TTAAGGCTTTCTTCTGGGTC+AGG + chr2_3:64824319-64824338 Msa0306210:intron 45.0%
TGTATAGGTTCATGGTGTGG+AGG + chr2_3:64824434-64824453 Msa0306210:intron 45.0%
GTATAGGTTCATGGTGTGGA+GGG + chr2_3:64824435-64824454 Msa0306210:intron 45.0%
!! GGAGAGAGAAAGGTATCAAG+AGG + chr2_3:64824524-64824543 Msa0306210:intron 45.0%
AGGGATCATGCAGTCTGTTA+GGG + chr2_3:64824544-64824563 Msa0306210:intron 45.0%
ACATCTCACCCTCATCATTG+GGG - chr2_3:64824963-64824982 None:intergenic 45.0%
AAGCGATCACTGAGTTTACC+GGG - chr2_3:64824994-64825013 None:intergenic 45.0%
!! TCAGCTGCTAGGTTTGCTAA+TGG + chr2_3:64825036-64825055 Msa0306210:CDS 45.0%
! CGTTTGCCCTTTGTGTTTTC+AGG + chr2_3:64825157-64825176 Msa0306210:intron 45.0%
GACGAGCCTGAAAACACAAA+GGG - chr2_3:64825166-64825185 None:intergenic 45.0%
TGACGAGCCTGAAAACACAA+AGG - chr2_3:64825167-64825186 None:intergenic 45.0%
!! TGTTTTCAGGCTCGTCACAA+TGG + chr2_3:64825170-64825189 Msa0306210:intron 45.0%
TATACCGAAATACCAGCAGG+GGG - chr2_3:64825236-64825255 None:intergenic 45.0%
GAAATTGCTTGACCACCTGA+TGG + chr2_3:64825330-64825349 Msa0306210:intron 45.0%
CAAATTGGTGTGCAGGGAAA+GGG - chr2_3:64825443-64825462 None:intergenic 45.0%
ACAAATTGGTGTGCAGGGAA+AGG - chr2_3:64825444-64825463 None:intergenic 45.0%
AAGCATCTTAGGCATGGCAA+TGG - chr2_3:64825870-64825889 None:intergenic 45.0%
GCGCCATCATTAAGCATCTT+AGG - chr2_3:64825881-64825900 None:intergenic 45.0%
GGCGCTGTTGAATATGAAGA+TGG + chr2_3:64825896-64825915 Msa0306210:CDS 45.0%
! AGTTTTCGCTCTTCCATCTC+AGG - chr2_3:64826099-64826118 None:intergenic 45.0%
TGAGATGGAAGAGCGAAAAC+TGG + chr2_3:64826098-64826117 Msa0306210:CDS 45.0%
TCTCGTCATGCCAAATTCGT+TGG + chr2_3:64826381-64826400 Msa0306210:three_prime_UTR 45.0%
TAAGTGTATGTAGGTCCTGG+AGG - chr2_3:64826519-64826538 None:intergenic 45.0%
!!! AAATTTTTAATACTATAAAT+AGG + chr2_3:64823309-64823328 Msa0306210:intron 5.0%
ACCCCTAGGCTAGACTTTGA+GGG + chr2_3:64821879-64821898 Msa0306210:intron 50.0%
TCCCTCAAAGTCTAGCCTAG+GGG - chr2_3:64821883-64821902 None:intergenic 50.0%
CATCCCTCAAAGTCTAGCCT+AGG - chr2_3:64821885-64821904 None:intergenic 50.0%
! CTAGGCTAGACTTTGAGGGA+TGG + chr2_3:64821883-64821902 Msa0306210:intron 50.0%
! AGGCTAGACTTTGAGGGATG+GGG + chr2_3:64821885-64821904 Msa0306210:intron 50.0%
ACTGTTAGATGAGGGGAACC+TGG - chr2_3:64822136-64822155 None:intergenic 50.0%
ATCAGGTGATGTGGATCGCA+TGG - chr2_3:64822569-64822588 None:intergenic 50.0%
CAGGGAGGATTGACGAAGAT+TGG - chr2_3:64823015-64823034 None:intergenic 50.0%
! TTGGAGGGGAATGCTTTGGA+AGG + chr2_3:64823068-64823087 Msa0306210:intron 50.0%
GACATGATCAGGATCTTCCG+AGG - chr2_3:64823673-64823692 None:intergenic 50.0%
!! AAAGACGGTTCTGGCTCTAC+TGG + chr2_3:64823755-64823774 Msa0306210:CDS 50.0%
GCCCTTGCTTTAATTGGAGC+TGG + chr2_3:64823794-64823813 Msa0306210:CDS 50.0%
! AGCTGGTGTCTCAGGTCTTT+TGG + chr2_3:64823811-64823830 Msa0306210:CDS 50.0%
! GCTGGTGTCTCAGGTCTTTT+GGG + chr2_3:64823812-64823831 Msa0306210:CDS 50.0%
TCAGCTGATGAAGCTGAGCA+TGG + chr2_3:64823851-64823870 Msa0306210:CDS 50.0%
ATGGATAGTGTGGAGATGCG+AGG - chr2_3:64823877-64823896 None:intergenic 50.0%
TCGCATCTCCACACTATCCA+TGG + chr2_3:64823876-64823895 Msa0306210:CDS 50.0%
GTTTGCTCTACACCTCGGAT+AGG + chr2_3:64824365-64824384 Msa0306210:intron 50.0%
GGATAGGAGCCTGAATGAGA+AGG + chr2_3:64824381-64824400 Msa0306210:intron 50.0%
TAGGAGCCTGAATGAGAAGG+TGG + chr2_3:64824384-64824403 Msa0306210:intron 50.0%
AGGAGCCTGAATGAGAAGGT+GGG + chr2_3:64824385-64824404 Msa0306210:intron 50.0%
TTGAGCCCACCTTCTCATTC+AGG - chr2_3:64824393-64824412 None:intergenic 50.0%
GAGGGATCATGCAGTCTGTT+AGG + chr2_3:64824543-64824562 Msa0306210:intron 50.0%
GGGATCATGCAGTCTGTTAG+GGG + chr2_3:64824545-64824564 Msa0306210:intron 50.0%
TATGGCAGCTGAGATTGAGG+TGG + chr2_3:64824930-64824949 Msa0306210:CDS 50.0%
GCTGAGATTGAGGTGGAAGA+TGG + chr2_3:64824937-64824956 Msa0306210:CDS 50.0%
GAAGATGGCCCCAATGATGA+GGG + chr2_3:64824952-64824971 Msa0306210:CDS 50.0%
AGCGATCACTGAGTTTACCG+GGG - chr2_3:64824993-64825012 None:intergenic 50.0%
!! GCTGCTAGGTTTGCTAATGG+AGG + chr2_3:64825039-64825058 Msa0306210:CDS 50.0%
ATACCGAAATACCAGCAGGG+GGG - chr2_3:64825235-64825254 None:intergenic 50.0%
TTGGTTCCAAACCACCCATC+AGG - chr2_3:64825348-64825367 None:intergenic 50.0%
ATGGCTCCACCAGGGAAATA+AGG - chr2_3:64825851-64825870 None:intergenic 50.0%
CCGAAGACGACGATAGTATG+CGG - chr2_3:64826252-64826271 None:intergenic 50.0%
CCGCATACTATCGTCGTCTT+CGG + chr2_3:64826249-64826268 Msa0306210:CDS 50.0%
CATACTATCGTCGTCTTCGG+TGG + chr2_3:64826252-64826271 Msa0306210:CDS 50.0%
GACCCCTAGGCTAGACTTTG+AGG + chr2_3:64821878-64821897 Msa0306210:intron 55.0%
! GGCTAGACTTTGAGGGATGG+GGG + chr2_3:64821886-64821905 Msa0306210:intron 55.0%
TGCTACGGCATCAGGTGATG+TGG - chr2_3:64822578-64822597 None:intergenic 55.0%
TCGTGAGGCCATGGATAGTG+TGG - chr2_3:64823887-64823906 None:intergenic 55.0%
ACACTATCCATGGCCTCACG+AGG + chr2_3:64823886-64823905 Msa0306210:CDS 55.0%
CACTATCCATGGCCTCACGA+GGG + chr2_3:64823887-64823906 Msa0306210:CDS 55.0%
GAACTGAGGATTCCCTCGTG+AGG - chr2_3:64823902-64823921 None:intergenic 55.0%
CTCATTCAGGCTCCTATCCG+AGG - chr2_3:64824380-64824399 None:intergenic 55.0%
TGTATGGACAGGATTCGCCG+TGG + chr2_3:64824805-64824824 Msa0306210:intron 55.0%
GGCTATGGCAGCTGAGATTG+AGG + chr2_3:64824927-64824946 Msa0306210:CDS 55.0%
GGAAGATGGCCCCAATGATG+AGG + chr2_3:64824951-64824970 Msa0306210:CDS 55.0%
GGTGAGATGTTTACACGCCC+CGG + chr2_3:64824973-64824992 Msa0306210:CDS 55.0%
AAATACCAGCAGGGGGGTCA+CGG - chr2_3:64825229-64825248 None:intergenic 55.0%
TGACCCCCCTGCTGGTATTT+CGG + chr2_3:64825229-64825248 Msa0306210:CDS 55.0%
TTGCTTGACCACCTGATGGG+TGG + chr2_3:64825334-64825353 Msa0306210:intron 55.0%
! TGACCACCTGATGGGTGGTT+TGG + chr2_3:64825339-64825358 Msa0306210:intron 55.0%
GTTCCAAACCACCCATCAGG+TGG - chr2_3:64825345-64825364 None:intergenic 55.0%
TACCTGAGCTTCGGTAGCAG+GGG - chr2_3:64825924-64825943 None:intergenic 55.0%
GTACCTGAGCTTCGGTAGCA+GGG - chr2_3:64825925-64825944 None:intergenic 55.0%
AGTACCTGAGCTTCGGTAGC+AGG - chr2_3:64825926-64825945 None:intergenic 55.0%
TTGGGCAGCAGAACCTGAGA+TGG + chr2_3:64826083-64826102 Msa0306210:CDS 55.0%
GTGTATGTAGGTCCTGGAGG+AGG - chr2_3:64826516-64826535 None:intergenic 55.0%
AGGATTCCCTCGTGAGGCCA+TGG - chr2_3:64823896-64823915 None:intergenic 60.0%
GGGGGTCACGGTAACCAGTT+AGG - chr2_3:64825217-64825236 None:intergenic 60.0%
GCATGGCAATGGCTCCACCA+GGG - chr2_3:64825859-64825878 None:intergenic 60.0%
TACCCCTGCTACCGAAGCTC+AGG + chr2_3:64825919-64825938 Msa0306210:CDS 60.0%
GGCATGGCAATGGCTCCACC+AGG - chr2_3:64825860-64825879 None:intergenic 65.0%
GGTTACCGTGACCCCCCTGC+TGG + chr2_3:64825221-64825240 Msa0306210:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 64821723 64826879 64821723 ID=Msa0306210;Name=Msa0306210
chr2_3 mRNA 64821723 64826879 64821723 ID=Msa0306210-mRNA-1;Parent=Msa0306210;Name=Msa0306210-mRNA-1;_AED=0.03;_eAED=0.03;_QI=11|1|1|1|1|1|7|560|306
chr2_3 exon 64821723 64821790 64821723 ID=Msa0306210-mRNA-1:exon:21566;Parent=Msa0306210-mRNA-1
chr2_3 exon 64823725 64823936 64823725 ID=Msa0306210-mRNA-1:exon:21567;Parent=Msa0306210-mRNA-1
chr2_3 exon 64824816 64825095 64824816 ID=Msa0306210-mRNA-1:exon:21568;Parent=Msa0306210-mRNA-1
chr2_3 exon 64825179 64825250 64825179 ID=Msa0306210-mRNA-1:exon:21569;Parent=Msa0306210-mRNA-1
chr2_3 exon 64825824 64825940 64825824 ID=Msa0306210-mRNA-1:exon:21570;Parent=Msa0306210-mRNA-1
chr2_3 exon 64826054 64826119 64826054 ID=Msa0306210-mRNA-1:exon:21571;Parent=Msa0306210-mRNA-1
chr2_3 exon 64826203 64826879 64826203 ID=Msa0306210-mRNA-1:exon:21572;Parent=Msa0306210-mRNA-1
chr2_3 five_prime_UTR 64821723 64821733 64821723 ID=Msa0306210-mRNA-1:five_prime_utr;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64821734 64821790 64821734 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64823725 64823936 64823725 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64824816 64825095 64824816 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64825179 64825250 64825179 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64825824 64825940 64825824 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64826054 64826119 64826054 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 CDS 64826203 64826319 64826203 ID=Msa0306210-mRNA-1:cds;Parent=Msa0306210-mRNA-1
chr2_3 three_prime_UTR 64826320 64826879 64826320 ID=Msa0306210-mRNA-1:three_prime_utr;Parent=Msa0306210-mRNA-1
Gene Sequence

>Msa0306210

ATGGCTGGAGGTGTTTTTCAACAATTATTGAGGAGGAAACTCCAATCTCATTCTCTGAGTCCTTCTGTATCATCCATTGTCTCAAAGAAAGACGGTTCTGGCTCTACTGGCAGCAGTTCCTTAAGAGCCCTTGCTTTAATTGGAGCTGGTGTCTCAGGTCTTTTGGGTTTTGCAACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTCGCATCTCCACACTATCCATGGCCTCACGAGGGAATCCTCAGTTCATATGATCACGCTTCGATTCGCCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGCCATTCCATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTACACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGAAGATGGCCCCAATGATGAGGGTGAGATGTTTACACGCCCCGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAATCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCTGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCTCTCCTAACTGGTTACCGTGACCCCCCTGCTGGTATTTCGATCAGAGAAGGATTGCATTACAATCCTTATTTCCCTGGTGGAGCCATTGCCATGCCTAAGATGCTTAATGATGGCGCTGTTGAATATGAAGATGGTACCCCTGCTACCGAAGCTCAGATGGGGAAAGATGTTGTGTCATTTTTGTCTTGGGCAGCAGAACCTGAGATGGAAGAGCGAAAACTGATGGGATTTAAATGGATATTTGTACTTTCATTGGCATTACTTCAAGCCGCATACTATCGTCGTCTTCGGTGGTCTGTTCTTAAGTCTCGCAAGTTGGTTCTTGATGTTGTCAACTAG

Protein sequence

>Msa0306210

MAGGVFQQLLRRKLQSHSLSPSVSSIVSKKDGSGSTGSSSLRALALIGAGVSGLLGFATTASADEAEHGLASPHYPWPHEGILSSYDHASIRRGHQVYTQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN*