Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053010 | XP_013465907.1 | 96.013 | 301 | 4 | 2 | 1 | 301 | 1 | 293 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053010 | A0A072VEU0 | 96.013 | 301 | 4 | 2 | 1 | 301 | 1 | 293 | 0.0 | 581 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0053010 | 0.837496 | 5.022830e-57 | -8.615850e-47 |
| Msa0042550 | Msa0053010 | 0.802697 | 4.960143e-49 | -8.615850e-47 |
| Msa0053010 | Msa0054750 | 0.808579 | 2.889830e-50 | -8.615850e-47 |
| Msa0053010 | Msa0057680 | -0.800905 | 1.157329e-48 | -8.615850e-47 |
| Msa0053010 | Msa0068740 | -0.827551 | 1.469468e-54 | -8.615850e-47 |
| Msa0053010 | Msa0096030 | 0.822459 | 2.341847e-53 | -8.615850e-47 |
| Msa0053010 | Msa0098320 | 0.844552 | 7.046593e-59 | -8.615850e-47 |
| Msa0053010 | Msa0098340 | 0.868407 | 6.682809e-66 | -8.615850e-47 |
| Msa0053010 | Msa0105260 | 0.809178 | 2.151841e-50 | -8.615850e-47 |
| Msa0053010 | Msa0187950 | 0.807767 | 4.304539e-50 | -8.615850e-47 |
| Msa0053010 | Msa0194440 | 0.824257 | 8.904317e-54 | -8.615850e-47 |
| Msa0053010 | Msa0241140 | 0.800725 | 1.259577e-48 | -8.615850e-47 |
| Msa0053010 | Msa0257500 | 0.803172 | 3.957258e-49 | -8.615850e-47 |
| Msa0053010 | Msa0275020 | 0.803865 | 2.842077e-49 | -8.615850e-47 |
| Msa0053010 | Msa0358860 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0053010 | Msa0383800 | 0.814895 | 1.220293e-51 | -8.615850e-47 |
| Msa0053010 | Msa0417330 | 0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0053010 | Msa0434000 | 0.810549 | 1.090897e-50 | -8.615850e-47 |
| Msa0053010 | Msa0434180 | 0.831844 | 1.325826e-55 | -8.615850e-47 |
| Msa0053010 | Msa0457510 | 0.816035 | 6.805244e-52 | -8.615850e-47 |
| Msa0053010 | Msa0472960 | -0.819476 | 1.138610e-52 | -8.615850e-47 |
| Msa0053010 | Msa0485490 | 0.817818 | 2.706748e-52 | -8.615850e-47 |
| Msa0053010 | Msa0598880 | -0.802327 | 5.913437e-49 | -8.615850e-47 |
| Msa0053010 | Msa0621790 | 0.815967 | 7.048716e-52 | -8.615850e-47 |
| Msa0053010 | Msa0649110 | 0.814456 | 1.526197e-51 | -8.615850e-47 |
| Msa0053010 | Msa0652940 | 0.813114 | 3.015155e-51 | -8.615850e-47 |
| Msa0053010 | Msa0788540 | 0.805591 | 1.239746e-49 | -8.615850e-47 |
| Msa0053010 | Msa0795720 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa0053010 | Msa0833460 | 0.822182 | 2.715698e-53 | -8.615850e-47 |
| Msa0053010 | Msa0870060 | 0.812901 | 3.357307e-51 | -8.615850e-47 |
| Msa0053010 | Msa0879600 | 0.809497 | 1.837727e-50 | -8.615850e-47 |
| Msa0053010 | Msa0888260 | 0.807627 | 4.609334e-50 | -8.615850e-47 |
| Msa0053010 | Msa0893690 | -0.816561 | 5.189215e-52 | -8.615850e-47 |
| Msa0053010 | Msa0925810 | 0.820746 | 5.829110e-53 | -8.615850e-47 |
| Msa0053010 | Msa0925870 | 0.866544 | 2.638209e-65 | -8.615850e-47 |
| Msa0053010 | Msa0935410 | 0.807809 | 4.216840e-50 | -8.615850e-47 |
| Msa0053010 | Msa0935770 | 0.809020 | 2.326054e-50 | -8.615850e-47 |
| Msa0053010 | Msa0942550 | -0.806741 | 7.098228e-50 | -8.615850e-47 |
| Msa0053010 | Msa0946280 | -0.803727 | 3.035857e-49 | -8.615850e-47 |
| Msa0053010 | Msa0976670 | 0.800192 | 1.617098e-48 | -8.615850e-47 |
| Msa0053010 | Msa1026940 | 0.854389 | 1.271567e-61 | -8.615850e-47 |
| Msa0053010 | Msa1063690 | 0.818392 | 2.007801e-52 | -8.615850e-47 |
| Msa0053010 | Msa1064250 | 0.817090 | 3.948338e-52 | -8.615850e-47 |
| Msa0053010 | Msa1081790 | -0.811754 | 5.976635e-51 | -8.615850e-47 |
| Msa0053010 | Msa1166090 | -0.804715 | 1.891135e-49 | -8.615850e-47 |
| Msa0053010 | Msa1172400 | 0.808801 | 2.591239e-50 | -8.615850e-47 |
| Msa0053010 | Msa1178110 | 0.800110 | 1.680383e-48 | -8.615850e-47 |
| Msa0053010 | Msa1207470 | -0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0053010 | Msa1280320 | 0.809805 | 1.577695e-50 | -8.615850e-47 |
| Msa0053010 | Msa1372150 | 0.805771 | 1.136384e-49 | -8.615850e-47 |
| Msa0053010 | Msa1374710 | 0.813797 | 2.134050e-51 | -8.615850e-47 |
| Msa0053010 | Msa1396400 | -0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa0053010 | Msa1403340 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0053010 | Msa1406110 | -0.829739 | 4.349015e-55 | -8.615850e-47 |
| Msa0053010 | Msa1420820 | 0.800317 | 1.525673e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053010 | MtrunA17_Chr1g0151811 | 96.013 | 301 | 4 | 2 | 1 | 301 | 1 | 293 | 0.0 | 581 |
| Msa0053010 | MtrunA17_Chr7g0253361 | 41.313 | 259 | 96 | 11 | 46 | 301 | 12 | 217 | 1.57e-46 | 156 |
| Msa0053010 | MtrunA17_Chr8g0369051 | 33.829 | 269 | 118 | 8 | 51 | 301 | 27 | 253 | 1.88e-28 | 110 |
| Msa0053010 | MtrunA17_Chr6g0484191 | 50.847 | 59 | 29 | 0 | 221 | 279 | 169 | 227 | 1.34e-14 | 71.6 |
| Msa0053010 | MtrunA17_Chr5g0423331 | 46.552 | 58 | 31 | 0 | 220 | 277 | 154 | 211 | 7.71e-12 | 63.9 |
| Msa0053010 | MtrunA17_Chr5g0423281 | 51.724 | 58 | 27 | 1 | 220 | 277 | 144 | 200 | 9.25e-12 | 63.5 |
| Msa0053010 | MtrunA17_Chr6g0451821 | 40.789 | 76 | 37 | 1 | 202 | 277 | 168 | 235 | 3.02e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053010 | AT1G55340.2 | 80.000 | 85 | 16 | 1 | 217 | 301 | 112 | 195 | 3.70e-42 | 144 |
| Msa0053010 | AT1G55340.1 | 80.000 | 85 | 16 | 1 | 217 | 301 | 122 | 205 | 5.62e-42 | 144 |
| Msa0053010 | AT3G03880.1 | 36.328 | 256 | 88 | 9 | 51 | 301 | 8 | 193 | 9.62e-34 | 122 |
| Msa0053010 | AT4G20300.2 | 42.500 | 160 | 71 | 5 | 153 | 301 | 203 | 352 | 1.18e-27 | 110 |
| Msa0053010 | AT4G20300.1 | 40.141 | 142 | 66 | 4 | 153 | 285 | 203 | 334 | 8.54e-22 | 94.0 |
Find 122 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATCCTTCAGCTGAAAA+TGG | 0.194017 | 1_2:+7415682 | None:intergenic |
| CACGAAGAATCTTCTACTTT+TGG | 0.224737 | 1_2:+7415582 | None:intergenic |
| TAATTTCTTTAACATAATTA+AGG | 0.252194 | 1_2:-7424500 | Msa0053010:intron |
| GAGGGTACGTTGTATCAATT+TGG | 0.278996 | 1_2:+7418755 | None:intergenic |
| ACAATTATGCATAAACGTTT+TGG | 0.281095 | 1_2:+7415719 | None:intergenic |
| AAAGGTGGAGGGTCATCTTC+TGG | 0.286744 | 1_2:-7418903 | Msa0053010:CDS |
| CCTTGGAACGATATGAAGTT+AGG | 0.306844 | 1_2:-7416266 | Msa0053010:CDS |
| CGATAGTTGTGAAGAAGTTC+TGG | 0.311842 | 1_2:-7423906 | Msa0053010:five_prime_UTR |
| AGTGAATAGTCAAATTCTTC+TGG | 0.337566 | 1_2:+7423811 | None:intergenic |
| GGAGAAGAAAATAACCAAAA+AGG | 0.347417 | 1_2:-7416244 | Msa0053010:intron |
| GAGTGGACCGGAGGGTAATT+AGG | 0.356616 | 1_2:-7422404 | Msa0053010:CDS |
| CCGGTTTGAAGTATCTTTCT+CGG | 0.366115 | 1_2:+7422380 | None:intergenic |
| TTCTCATGTCCAACCCTCTC+TGG | 0.370221 | 1_2:+7419014 | None:intergenic |
| AGATCTTAGAATAAGATGTT+TGG | 0.376795 | 1_2:+7424561 | None:intergenic |
| CGAACCGTTGTCCTTTGAAC+CGG | 0.377901 | 1_2:+7422426 | None:intergenic |
| ACAATCATCCACGTCAGATT+TGG | 0.383251 | 1_2:-7422517 | Msa0053010:CDS |
| TGTTATTGTGTTCATTGTGA+TGG | 0.398429 | 1_2:+7418976 | None:intergenic |
| TATCTTCATCTTCATCATCT+TGG | 0.398575 | 1_2:-7423878 | Msa0053010:five_prime_UTR |
| GATCTAGTTCCTTGTTATTG+AGG | 0.401781 | 1_2:-7422560 | Msa0053010:CDS |
| CACAAACCAACGGAAGTGTT+AGG | 0.402272 | 1_2:-7419049 | Msa0053010:CDS |
| GGAGGAGGTTGCTGTGGAGA+AGG | 0.406336 | 1_2:+7422261 | None:intergenic |
| GTCAGATTTGGTGTTACAAT+GGG | 0.408255 | 1_2:-7422505 | Msa0053010:CDS |
| TTCATCTTCATCATCTTGGC+AGG | 0.413624 | 1_2:-7423874 | Msa0053010:five_prime_UTR |
| ATGCATAATTGTGAATGATA+AGG | 0.417077 | 1_2:-7415708 | Msa0053010:three_prime_UTR |
| ATCTAGTTCCTTGTTATTGA+GGG | 0.425809 | 1_2:-7422559 | Msa0053010:CDS |
| GCTATTGATGTGAGAAATGT+TGG | 0.431477 | 1_2:-7415821 | Msa0053010:three_prime_UTR |
| TTTAGGAACACAGAAGGTTC+AGG | 0.431490 | 1_2:-7419086 | Msa0053010:intron |
| GTTATTGTGTTCATTGTGAT+GGG | 0.431732 | 1_2:+7418977 | None:intergenic |
| AAAGATACTTCAAACCGGTT+TGG | 0.432467 | 1_2:-7422375 | Msa0053010:CDS |
| GACAAGTACCTGAGAATCCT+TGG | 0.435770 | 1_2:+7422240 | None:intergenic |
| TTCTTTCTCCTTGTTAGTCA+AGG | 0.436328 | 1_2:+7418833 | None:intergenic |
| ATAATCAAAATCAGAGTAAC+GGG | 0.439354 | 1_2:-7422308 | Msa0053010:CDS |
| CTTATCCTTCAGCTGAAAAT+GGG | 0.442988 | 1_2:+7415683 | None:intergenic |
| GGAGGAGGGAGTGATGGATA+AGG | 0.447865 | 1_2:-7422664 | Msa0053010:exon |
| GAAGCAAGGAAATGTGGAAA+TGG | 0.451749 | 1_2:-7415890 | Msa0053010:three_prime_UTR |
| AAGGTGGAGGGTCATCTTCT+GGG | 0.459077 | 1_2:-7418902 | Msa0053010:CDS |
| AAATCGAATATAAATTAACT+TGG | 0.462663 | 1_2:-7415784 | Msa0053010:three_prime_UTR |
| AACCTCCTCCAAGGATTCTC+AGG | 0.463865 | 1_2:-7422248 | Msa0053010:intron |
| ACAAACCAACGGAAGTGTTA+GGG | 0.464810 | 1_2:-7419048 | Msa0053010:CDS |
| GAAAGTAAAGCTTACATTGA+GGG | 0.470964 | 1_2:+7418737 | None:intergenic |
| AGCTTCATCTGATAACGCTT+TGG | 0.473684 | 1_2:-7418934 | Msa0053010:CDS |
| TAGAAGATTCTTCGTGTTCA+CGG | 0.476394 | 1_2:-7415575 | Msa0053010:three_prime_UTR |
| GTCAAGGCAATCACAAACTT+TGG | 0.479172 | 1_2:+7418849 | None:intergenic |
| CACAATGTTATTATCAGTGT+GGG | 0.485274 | 1_2:+7422347 | None:intergenic |
| GAGGAGGTTGCTGTGGAGAA+GGG | 0.485463 | 1_2:+7422262 | None:intergenic |
| TTATTGAGGGCTAGCTCAGA+TGG | 0.486801 | 1_2:-7422546 | Msa0053010:CDS |
| TATAATGATGACAGGGAGGA+GGG | 0.488368 | 1_2:-7422678 | Msa0053010:intron |
| CTTGGAACGATATGAAGTTA+GGG | 0.491073 | 1_2:-7416265 | Msa0053010:CDS |
| TGTGTTCATTGTGATGGGTG+TGG | 0.491913 | 1_2:+7418982 | None:intergenic |
| CAATGTTGTTGCTGTTGTCA+TGG | 0.495227 | 1_2:+7422628 | None:intergenic |
| GTATTGCAGCTTGTAAGTCC+AGG | 0.495328 | 1_2:-7416309 | Msa0053010:intron |
| GTGTTCATTGTGATGGGTGT+GGG | 0.496511 | 1_2:+7418983 | None:intergenic |
| GGAGGGTCATCTTCTGGGAG+TGG | 0.498443 | 1_2:-7418897 | Msa0053010:CDS |
| CCAAGAGGCTTAAAAGCAAT+GGG | 0.498492 | 1_2:-7415940 | Msa0053010:CDS |
| TTATTGAATGGTTAACGCTA+AGG | 0.499726 | 1_2:-7424529 | Msa0053010:five_prime_UTR |
| AACTTTGGTGGCCACACCGA+TGG | 0.505287 | 1_2:+7418864 | None:intergenic |
| ATATAATGATGACAGGGAGG+AGG | 0.507151 | 1_2:-7422679 | Msa0053010:intron |
| AGAAGATTCTTCGTGTTCAC+GGG | 0.507976 | 1_2:-7415574 | Msa0053010:three_prime_UTR |
| ATTCTTTAAACCCGGTTCAA+AGG | 0.508867 | 1_2:-7422437 | Msa0053010:CDS |
| TGACAGGGAGGAGGGAGTGA+TGG | 0.510180 | 1_2:-7422670 | Msa0053010:intron |
| AACGCTTTGGATGGGAAGAA+AGG | 0.510782 | 1_2:-7418921 | Msa0053010:CDS |
| CAGTGTGGGATGTTCCAAAC+CGG | 0.511797 | 1_2:+7422361 | None:intergenic |
| ACCAAGAGGCTTAAAAGCAA+TGG | 0.512093 | 1_2:-7415941 | Msa0053010:CDS |
| TCATCTGATAACGCTTTGGA+TGG | 0.513738 | 1_2:-7418930 | Msa0053010:CDS |
| ACTGATAATAACATTGTGAA+TGG | 0.516194 | 1_2:-7422342 | Msa0053010:CDS |
| CGTCAGATTTGGTGTTACAA+TGG | 0.518607 | 1_2:-7422506 | Msa0053010:CDS |
| GTTTGGATTTGCAAAGAGAA+TGG | 0.520532 | 1_2:+7424578 | None:intergenic |
| AATAATCAAAATCAGAGTAA+CGG | 0.527412 | 1_2:-7422309 | Msa0053010:CDS |
| CTTAAAAGCAATGGGTAACA+TGG | 0.527635 | 1_2:-7415932 | Msa0053010:CDS |
| AAGCTTCAAGCTTTAGATGT+CGG | 0.528298 | 1_2:-7415663 | Msa0053010:three_prime_UTR |
| GAACCGTTGTCCTTTGAACC+GGG | 0.534500 | 1_2:+7422427 | None:intergenic |
| AGATCGGATAGCCATGTACC+TGG | 0.546535 | 1_2:+7416291 | None:intergenic |
| AGCTTGTAAGTCCAGGTACA+TGG | 0.549493 | 1_2:-7416302 | Msa0053010:CDS |
| AGGGTTGGACATGAGAAAAG+AGG | 0.551202 | 1_2:-7419008 | Msa0053010:CDS |
| AAAACTCTTGCTTTATGCTG+TGG | 0.551440 | 1_2:-7415843 | Msa0053010:three_prime_UTR |
| TCTCGGTCCTAATTACCCTC+CGG | 0.553037 | 1_2:+7422397 | None:intergenic |
| GGACAACGGTTCGAGTGGAC+CGG | 0.554350 | 1_2:-7422416 | Msa0053010:CDS |
| CCGAGAAAGATACTTCAAAC+CGG | 0.563010 | 1_2:-7422380 | Msa0053010:CDS |
| AATTCCCCTAACACTTCCGT+TGG | 0.563323 | 1_2:+7419043 | None:intergenic |
| ATCCTTGGAGGAGGTTGCTG+TGG | 0.564143 | 1_2:+7422255 | None:intergenic |
| GACTCTGAATAGAAGAAGCA+AGG | 0.567858 | 1_2:-7415904 | Msa0053010:exon |
| TCATCTTCATCATCTTGGCA+GGG | 0.571854 | 1_2:-7423873 | Msa0053010:five_prime_UTR |
| TGGAAATGGTATAATAGCAA+AGG | 0.573303 | 1_2:-7415876 | Msa0053010:three_prime_UTR |
| GGGAATTGCCTCACCAGAGA+GGG | 0.576167 | 1_2:-7419027 | Msa0053010:CDS |
| ATGGCTATCCGATCTTACCT+TGG | 0.579581 | 1_2:-7416283 | Msa0053010:CDS |
| TTGGATGGGAAGAAAGGTGG+AGG | 0.580451 | 1_2:-7418915 | Msa0053010:CDS |
| TGTGATTGCCTTGACTAACA+AGG | 0.581619 | 1_2:-7418841 | Msa0053010:CDS |
| GGGGCACGTTGACGAAGACT+AGG | 0.582315 | 1_2:+7422282 | None:intergenic |
| ATATCGTTCCAAGGTAAGAT+CGG | 0.583061 | 1_2:+7416275 | None:intergenic |
| ATGTCCAACCCTCTCTGGTG+AGG | 0.586202 | 1_2:+7419019 | None:intergenic |
| CATCTGATAACGCTTTGGAT+GGG | 0.586472 | 1_2:-7418929 | Msa0053010:CDS |
| AGGAGGTTGCTGTGGAGAAG+GGG | 0.586535 | 1_2:+7422263 | None:intergenic |
| TAAACAAGATTCTTTAAACC+CGG | 0.587106 | 1_2:-7422445 | Msa0053010:CDS |
| CCTAACTTCATATCGTTCCA+AGG | 0.590769 | 1_2:+7416266 | None:intergenic |
| CTCCACAGCAACCTCCTCCA+AGG | 0.591267 | 1_2:-7422257 | Msa0053010:CDS |
| TCACAATGTTATTATCAGTG+TGG | 0.596873 | 1_2:+7422346 | None:intergenic |
| TACCTGAGAATCCTTGGAGG+AGG | 0.596976 | 1_2:+7422246 | None:intergenic |
| ATAGAAGAAGCAAGGAAATG+TGG | 0.601613 | 1_2:-7415896 | Msa0053010:exon |
| AAGGCAATCACAAACTTTGG+TGG | 0.606143 | 1_2:+7418852 | None:intergenic |
| ATTGCCTCACCAGAGAGGGT+TGG | 0.608116 | 1_2:-7419023 | Msa0053010:CDS |
| GGGTTGGACATGAGAAAAGA+GGG | 0.608434 | 1_2:-7419007 | Msa0053010:CDS |
| TCAAAGGACAACGGTTCGAG+TGG | 0.611497 | 1_2:-7422421 | Msa0053010:CDS |
| TTGATGTTTAGGAACACAGA+AGG | 0.614541 | 1_2:-7419092 | Msa0053010:intron |
| GAGTGGTGATGCTACTCCAT+CGG | 0.619228 | 1_2:-7418880 | Msa0053010:CDS |
| CTATTGATGTGAGAAATGTT+GGG | 0.619741 | 1_2:-7415820 | Msa0053010:three_prime_UTR |
| GAAGCGATTAAGGTGCATGA+AGG | 0.621498 | 1_2:-7422475 | Msa0053010:CDS |
| GAAGGTTCAGGTGCTATGAG+AGG | 0.627279 | 1_2:-7419074 | Msa0053010:CDS |
| CAACGGTTCGAGTGGACCGG+AGG | 0.627723 | 1_2:-7422413 | Msa0053010:CDS |
| AAGTACCTGAGAATCCTTGG+AGG | 0.631363 | 1_2:+7422243 | None:intergenic |
| GCTTTGGATGGGAAGAAAGG+TGG | 0.635297 | 1_2:-7418918 | Msa0053010:CDS |
| AACGGTTCGAGTGGACCGGA+GGG | 0.639023 | 1_2:-7422412 | Msa0053010:CDS |
| CAAACCAACGGAAGTGTTAG+GGG | 0.641324 | 1_2:-7419047 | Msa0053010:CDS |
| TCAGATTTGGTGTTACAATG+GGG | 0.648899 | 1_2:-7422504 | Msa0053010:CDS |
| CAGATTTGGTGTTACAATGG+GGG | 0.650450 | 1_2:-7422503 | Msa0053010:CDS |
| AATGTTATGTAGAGACCAAG+AGG | 0.650642 | 1_2:-7415955 | Msa0053010:intron |
| TGAGCTAGCCCTCAATAACA+AGG | 0.657714 | 1_2:+7422551 | None:intergenic |
| TTGTAACACCAAATCTGACG+TGG | 0.660043 | 1_2:+7422509 | None:intergenic |
| ATGAGAGGAACACAAACCAA+CGG | 0.678222 | 1_2:-7419059 | Msa0053010:CDS |
| GGGGAATTGCCTCACCAGAG+AGG | 0.690912 | 1_2:-7419028 | Msa0053010:CDS |
| AAACCCGGTTCAAAGGACAA+CGG | 0.698115 | 1_2:-7422430 | Msa0053010:CDS |
| TGGATGGGAAGAAAGGTGGA+GGG | 0.720606 | 1_2:-7418914 | Msa0053010:CDS |
| GTGATGCTACTCCATCGGTG+TGG | 0.771626 | 1_2:-7418875 | Msa0053010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTAATAATAATAA+TGG | - | chr1_2:7416994-7417013 | Msa0053010:intron | 0.0% |
| !! | AATAAATAATAAATAAAATT+GGG | + | chr1_2:7420932-7420951 | None:intergenic | 0.0% |
| !! | AAATAAATAATAAATAAAAT+TGG | + | chr1_2:7420933-7420952 | None:intergenic | 0.0% |
| !!! | TTTTTATTTTAATTTTTTAA+TGG | + | chr1_2:7422782-7422801 | None:intergenic | 0.0% |
| !! | AAATTAATTTAAATAAAAAA+TGG | + | chr1_2:7423436-7423455 | None:intergenic | 0.0% |
| !! | TAATTTCTTTAACATAATTA+AGG | - | chr1_2:7415712-7415731 | Msa0053010:three_prime_UTR | 10.0% |
| !!! | TAATTTTAATTTTTTTTCAG+TGG | - | chr1_2:7416276-7416295 | Msa0053010:CDS | 10.0% |
| !! | AATGAATATGTAATAATTTA+TGG | - | chr1_2:7417392-7417411 | Msa0053010:intron | 10.0% |
| !!! | AAAACATATTTTACTAATAA+TGG | - | chr1_2:7417477-7417496 | Msa0053010:intron | 10.0% |
| !!! | TTTTAATTTGTGAATAATTT+TGG | - | chr1_2:7419432-7419451 | Msa0053010:intron | 10.0% |
| !! | TATGAAATAATAAAAAATTC+TGG | + | chr1_2:7420001-7420020 | None:intergenic | 10.0% |
| !! | TAAATAAAAAACAAATTGAT+GGG | + | chr1_2:7420381-7420400 | None:intergenic | 10.0% |
| !! | ATAAATAAAAAACAAATTGA+TGG | + | chr1_2:7420382-7420401 | None:intergenic | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | - | chr1_2:7421760-7421779 | Msa0053010:intron | 10.0% |
| !!! | GTTTATATTTATTTTAGTAA+AGG | - | chr1_2:7422040-7422059 | Msa0053010:intron | 10.0% |
| !!! | ATTTATATCACATTTTTTTT+CGG | + | chr1_2:7422583-7422602 | None:intergenic | 10.0% |
| !! | AAAATATATAAATCTTTCAA+AGG | + | chr1_2:7423140-7423159 | None:intergenic | 10.0% |
| !!! | AATATGTGTTATATTAATTT+TGG | - | chr1_2:7423248-7423267 | Msa0053010:intron | 10.0% |
| !!! | CAAATAAAAAAAATTAGTTT+AGG | + | chr1_2:7424020-7424039 | None:intergenic | 10.0% |
| !!! | TCTTAATTTTCATTATTGAA+TGG | - | chr1_2:7415671-7415690 | Msa0053010:three_prime_UTR | 15.0% |
| !!! | ATCTAATTTCATTTTGTTTT+TGG | - | chr1_2:7415802-7415821 | Msa0053010:three_prime_UTR | 15.0% |
| !! | GAAAGTTTAAATATCAAATT+TGG | - | chr1_2:7416207-7416226 | Msa0053010:intron | 15.0% |
| !!! | AATTATTGCATTAATTTTCA+TGG | - | chr1_2:7416442-7416461 | Msa0053010:intron | 15.0% |
| !!! | TTTCATAGTTTTTTTTTTGA+AGG | - | chr1_2:7416818-7416837 | Msa0053010:intron | 15.0% |
| !!! | TAGATATTTTTTTGTACAAA+TGG | - | chr1_2:7417418-7417437 | Msa0053010:intron | 15.0% |
| !!! | TTAAAATCATGCAATTTTTT+TGG | - | chr1_2:7418048-7418067 | Msa0053010:intron | 15.0% |
| !! | TGATTGAGTATAAATAATTT+GGG | - | chr1_2:7419632-7419651 | Msa0053010:intron | 15.0% |
| !!! | GAAATTAATCTATTTTTCTA+AGG | - | chr1_2:7419870-7419889 | Msa0053010:intron | 15.0% |
| !!! | AGGTATCATTATTTTTTTTT+TGG | - | chr1_2:7419890-7419909 | Msa0053010:intron | 15.0% |
| !!! | TTATTTTAACTTAGATGAAA+AGG | + | chr1_2:7420763-7420782 | None:intergenic | 15.0% |
| !! | AAACAAATTAAATATGCATT+AGG | + | chr1_2:7421005-7421024 | None:intergenic | 15.0% |
| !!! | ATAATTTATGTATTTGGTTT+AGG | - | chr1_2:7421766-7421785 | Msa0053010:intron | 15.0% |
| !! | GGAGAAATTATTAATAATAA+CGG | - | chr1_2:7421978-7421997 | Msa0053010:intron | 15.0% |
| !!! | ATTTTAGTATAATCTCAAAA+GGG | - | chr1_2:7422072-7422091 | Msa0053010:intron | 15.0% |
| !!! | TTTTTTTTTGTTTTGTTGAT+AGG | - | chr1_2:7422151-7422170 | Msa0053010:intron | 15.0% |
| !! | ATAACTATCAATTTAAGAAA+GGG | + | chr1_2:7422199-7422218 | None:intergenic | 15.0% |
| !!! | TTTTTTTCATGAATCAAATT+AGG | + | chr1_2:7422460-7422479 | None:intergenic | 15.0% |
| !!! | GTTTTTCGATATTTTTATAA+TGG | - | chr1_2:7422495-7422514 | Msa0053010:CDS | 15.0% |
| !!! | AATATTCTGATTTTTTTTGT+TGG | - | chr1_2:7422919-7422938 | Msa0053010:intron | 15.0% |
| !! | TTTACAAATATACTGTTATT+AGG | + | chr1_2:7423361-7423380 | None:intergenic | 15.0% |
| !!! | TTTATTGATTAATACCTTTT+TGG | + | chr1_2:7423985-7424004 | None:intergenic | 15.0% |
| !! | AATCAATAAATAAATGAGAT+AGG | - | chr1_2:7424104-7424123 | Msa0053010:intron | 15.0% |
| !! | AAATCGAATATAAATTAACT+TGG | - | chr1_2:7424428-7424447 | Msa0053010:intron | 15.0% |
| !! | CAAAATGAAATTAGATATTC+TGG | + | chr1_2:7415798-7415817 | None:intergenic | 20.0% |
| !!! | TTCATTTTGTTGTATTTTGA+AGG | - | chr1_2:7415910-7415929 | Msa0053010:exon | 20.0% |
| !!! | TAAAATAATTTTGAAGCTGA+CGG | - | chr1_2:7416153-7416172 | Msa0053010:intron | 20.0% |
| !!! | AAAAAAATCTCATTTTCTTC+TGG | - | chr1_2:7416367-7416386 | Msa0053010:intron | 20.0% |
| !!! | AATTGTTTTAAGAGCAAAAT+CGG | - | chr1_2:7416725-7416744 | Msa0053010:intron | 20.0% |
| !!! | TATTTTCATAATTTGAAGTG+AGG | - | chr1_2:7416845-7416864 | Msa0053010:intron | 20.0% |
| !!! | ATAAAACAAGTTGCATATTT+TGG | + | chr1_2:7416976-7416995 | None:intergenic | 20.0% |
| !! | TTGTTCAAAATTATTACTAG+TGG | + | chr1_2:7417455-7417474 | None:intergenic | 20.0% |
| !! | AATAATCAAAATCAGAGTAA+CGG | - | chr1_2:7417903-7417922 | Msa0053010:intron | 20.0% |
| !! | AATAGCAAAAAAAATCACAA+TGG | + | chr1_2:7418119-7418138 | None:intergenic | 20.0% |
| !! | TATCCTAAAAGTAATCAATT+TGG | + | chr1_2:7419227-7419246 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTTGTTACTTTG+TGG | - | chr1_2:7419276-7419295 | Msa0053010:intron | 20.0% |
| !!! | TTTTTTTGTTGTTACTTTGT+GGG | - | chr1_2:7419277-7419296 | Msa0053010:intron | 20.0% |
| !!! | ACGTCATTTAAAAGTTTTAA+GGG | - | chr1_2:7419374-7419393 | Msa0053010:intron | 20.0% |
| !! | GTGATTGAGTATAAATAATT+TGG | - | chr1_2:7419631-7419650 | Msa0053010:intron | 20.0% |
| !! | ATAGACAAAGAATATCTAAT+TGG | + | chr1_2:7419670-7419689 | None:intergenic | 20.0% |
| !! | TATTCTTTGTCTATTTAAAG+TGG | - | chr1_2:7419676-7419695 | Msa0053010:intron | 20.0% |
| !! | AGAAAAATAGATTAATTTCG+AGG | + | chr1_2:7419869-7419888 | None:intergenic | 20.0% |
| !!! | TTTAAGGTTATAACTAAGTT+AGG | - | chr1_2:7419970-7419989 | Msa0053010:intron | 20.0% |
| !! | AAACAAAAAACACAAATTGA+GGG | + | chr1_2:7420337-7420356 | None:intergenic | 20.0% |
| !! | AAAACAAAAAACACAAATTG+AGG | + | chr1_2:7420338-7420357 | None:intergenic | 20.0% |
| !! | TAAACATAAATATCATCATG+AGG | - | chr1_2:7420417-7420436 | Msa0053010:intron | 20.0% |
| !! | AAAAAAAATTCCTCTCAATT+AGG | + | chr1_2:7421615-7421634 | None:intergenic | 20.0% |
| !! | CATTATTCAATGTATCTAAA+AGG | - | chr1_2:7421807-7421826 | Msa0053010:intron | 20.0% |
| !!! | ATGTAGTTTTATCACATTTT+GGG | + | chr1_2:7421943-7421962 | None:intergenic | 20.0% |
| !!! | AATGTAGTTTTATCACATTT+TGG | + | chr1_2:7421944-7421963 | None:intergenic | 20.0% |
| !! | TATTAATAATTTCTCCTTCT+TGG | + | chr1_2:7421974-7421993 | None:intergenic | 20.0% |
| !!! | CATTTTAGTATAATCTCAAA+AGG | - | chr1_2:7422071-7422090 | Msa0053010:intron | 20.0% |
| !! | GATAACTATCAATTTAAGAA+AGG | + | chr1_2:7422200-7422219 | None:intergenic | 20.0% |
| !!! | ATAAAGATTGTCATTTTTAG+TGG | - | chr1_2:7422267-7422286 | Msa0053010:CDS | 20.0% |
| !!! | TAAAGATTGTCATTTTTAGT+GGG | - | chr1_2:7422268-7422287 | Msa0053010:CDS | 20.0% |
| !!! | TTTTTATAATGGTTCCAATT+CGG | - | chr1_2:7422506-7422525 | Msa0053010:CDS | 20.0% |
| !!! | AATTCAAAGTATGTTTTTGT+GGG | + | chr1_2:7422666-7422685 | None:intergenic | 20.0% |
| !!! | AAATTCAAAGTATGTTTTTG+TGG | + | chr1_2:7422667-7422686 | None:intergenic | 20.0% |
| !! | AAAGAACAAACAATTAATCA+AGG | + | chr1_2:7423813-7423832 | None:intergenic | 20.0% |
| !! | AAAGACTAAATAGTAGTTAT+AGG | + | chr1_2:7424200-7424219 | None:intergenic | 20.0% |
| !! | AATTAGGTTTCTTTATCAAT+GGG | + | chr1_2:7424234-7424253 | None:intergenic | 20.0% |
| !! | AAATTAGGTTTCTTTATCAA+TGG | + | chr1_2:7424235-7424254 | None:intergenic | 20.0% |
| !! | ATTGATAAAGAAACCTAATT+TGG | - | chr1_2:7424234-7424253 | Msa0053010:intron | 20.0% |
| !! | ATTGCTAGAATGTTAAAAAT+TGG | - | chr1_2:7424590-7424609 | Msa0053010:five_prime_UTR | 20.0% |
| ! | AGATCTTAGAATAAGATGTT+TGG | + | chr1_2:7415654-7415673 | None:intergenic | 25.0% |
| ! | TATGCAAAAATTCGAAATTC+TGG | - | chr1_2:7416045-7416064 | Msa0053010:intron | 25.0% |
| !! | GTCATTGTTAGTTAGATTTT+AGG | - | chr1_2:7416107-7416126 | Msa0053010:intron | 25.0% |
| !!! | TGTTAGTTAGATTTTAGGTA+TGG | - | chr1_2:7416112-7416131 | Msa0053010:intron | 25.0% |
| ! | GAAATAAAAATGATAGCCAT+GGG | + | chr1_2:7416936-7416955 | None:intergenic | 25.0% |
| ! | AGAAATAAAAATGATAGCCA+TGG | + | chr1_2:7416937-7416956 | None:intergenic | 25.0% |
| ! | AGAGATAATTATGTTGACAA+TGG | - | chr1_2:7417136-7417155 | Msa0053010:intron | 25.0% |
| !!! | TTTTTTGCAAGACTACAATT+AGG | + | chr1_2:7417335-7417354 | None:intergenic | 25.0% |
| !! | ATTGATGATATAATGATGAC+AGG | - | chr1_2:7417526-7417545 | Msa0053010:intron | 25.0% |
| !! | TTGATGATATAATGATGACA+GGG | - | chr1_2:7417527-7417546 | Msa0053010:intron | 25.0% |
| ! | GATAATAGAGACAAAAATGA+AGG | - | chr1_2:7417621-7417640 | Msa0053010:intron | 25.0% |
| ! | TAAACAAGATTCTTTAAACC+CGG | - | chr1_2:7417767-7417786 | Msa0053010:intron | 25.0% |
| ! | ACTGATAATAACATTGTGAA+TGG | - | chr1_2:7417870-7417889 | Msa0053010:intron | 25.0% |
| ! | ATAATCAAAATCAGAGTAAC+GGG | - | chr1_2:7417904-7417923 | Msa0053010:intron | 25.0% |
| ! | AGTTTGGAAAAAAAATCGAT+CGG | - | chr1_2:7418257-7418276 | Msa0053010:intron | 25.0% |
| !!! | CCTAATATTAAGTTGAATAG+CGG | + | chr1_2:7418450-7418469 | None:intergenic | 25.0% |
| ! | TCAACTTAATATTAGGATAG+TGG | - | chr1_2:7418454-7418473 | Msa0053010:intron | 25.0% |
| ! | TGAATCACATAGATTACATT+AGG | - | chr1_2:7418529-7418548 | Msa0053010:intron | 25.0% |
| ! | ACATGATCAAACAAAAACAT+TGG | - | chr1_2:7418566-7418585 | Msa0053010:intron | 25.0% |
| ! | TATGTGAATTTCTTTGATTG+AGG | - | chr1_2:7418603-7418622 | Msa0053010:intron | 25.0% |
| ! | ATCAAGTGATTGTAATTGTA+TGG | - | chr1_2:7418938-7418957 | Msa0053010:CDS | 25.0% |
| ! | AAAAAGACGATTTGTATTGA+AGG | + | chr1_2:7418984-7419003 | None:intergenic | 25.0% |
| ! | AAACTTTGTATCTTTACGAT+AGG | + | chr1_2:7419059-7419078 | None:intergenic | 25.0% |
| !!! | TGTAGTTTTAGTCTTCAAAA+AGG | - | chr1_2:7419099-7419118 | Msa0053010:intron | 25.0% |
| !!! | TGCTGATTGTTTATGTATTT+TGG | - | chr1_2:7419123-7419142 | Msa0053010:intron | 25.0% |
| !! | GCTGATTGTTTATGTATTTT+GGG | - | chr1_2:7419124-7419143 | Msa0053010:intron | 25.0% |
| !!! | TTTTTTGTTGTTACTTTGTG+GGG | - | chr1_2:7419278-7419297 | Msa0053010:intron | 25.0% |
| !! | CTTAAAACTTTTAAATGACG+TGG | + | chr1_2:7419375-7419394 | None:intergenic | 25.0% |
| !! | CACGTCATTTAAAAGTTTTA+AGG | - | chr1_2:7419373-7419392 | Msa0053010:intron | 25.0% |
| ! | TTGAGTATAAATAATTTGGG+CGG | - | chr1_2:7419635-7419654 | Msa0053010:intron | 25.0% |
| !!! | ATTTTTTTTTTGGTGTGAAC+TGG | - | chr1_2:7419900-7419919 | Msa0053010:intron | 25.0% |
| ! | GTTATAACCTTAAAACTATC+CGG | + | chr1_2:7419964-7419983 | None:intergenic | 25.0% |
| ! | TGATATGTTAATGATCATAG+AGG | - | chr1_2:7420209-7420228 | Msa0053010:intron | 25.0% |
| ! | AACAAAAAACACAAATTGAG+GGG | + | chr1_2:7420336-7420355 | None:intergenic | 25.0% |
| !! | CTTTATTTATTACTACGTGT+TGG | + | chr1_2:7420589-7420608 | None:intergenic | 25.0% |
| !! | AACTTAGATGAAAAGGTTTT+AGG | + | chr1_2:7420756-7420775 | None:intergenic | 25.0% |
| !! | TGTGTGTTTTGTAGATTATA+AGG | + | chr1_2:7420822-7420841 | None:intergenic | 25.0% |
| ! | TACGAAATTGACCTTAATAA+GGG | + | chr1_2:7420898-7420917 | None:intergenic | 25.0% |
| ! | TTACGAAATTGACCTTAATA+AGG | + | chr1_2:7420899-7420918 | None:intergenic | 25.0% |
| ! | ATAAATAAAATTGGGAGAAG+TGG | + | chr1_2:7420924-7420943 | None:intergenic | 25.0% |
| ! | ATGTCATGTTTCATATTCAT+AGG | - | chr1_2:7421037-7421056 | Msa0053010:intron | 25.0% |
| ! | CTAAACATCAAATACAAGAA+AGG | + | chr1_2:7421111-7421130 | None:intergenic | 25.0% |
| ! | CTTTCTTGTATTTGATGTTT+AGG | - | chr1_2:7421109-7421128 | Msa0053010:intron | 25.0% |
| !! | AGAAGATTTTATGGCTATTA+AGG | - | chr1_2:7421401-7421420 | Msa0053010:intron | 25.0% |
| !! | GAAGATTTTATGGCTATTAA+GGG | - | chr1_2:7421402-7421421 | Msa0053010:intron | 25.0% |
| ! | CTTTACTTTCCTTAATTGTT+TGG | - | chr1_2:7421488-7421507 | Msa0053010:intron | 25.0% |
| ! | TAAAGCAAACCAAACAATTA+AGG | + | chr1_2:7421500-7421519 | None:intergenic | 25.0% |
| !!! | AGAGGAATTTTTTTTCTTAG+AGG | - | chr1_2:7421620-7421639 | Msa0053010:intron | 25.0% |
| ! | GTAAATTGTCTCTTGTAAAT+AGG | + | chr1_2:7421730-7421749 | None:intergenic | 25.0% |
| !! | GTCAATTTTCTCTTGTAAAT+AGG | - | chr1_2:7421829-7421848 | Msa0053010:intron | 25.0% |
| !! | GATGTATAAATTTGTTCAAG+AGG | + | chr1_2:7422015-7422034 | None:intergenic | 25.0% |
| !! | CTTAAATTGATAGTTATCCT+TGG | - | chr1_2:7422202-7422221 | Msa0053010:intron | 25.0% |
| ! | TTCAAAGGAAAAAAGAAAAG+AGG | + | chr1_2:7422297-7422316 | None:intergenic | 25.0% |
| !! | TTTGAATTTAATTTCACTGC+CGG | - | chr1_2:7422678-7422697 | Msa0053010:intron | 25.0% |
| ! | TTTCAAATAAGTCTTCAAAC+CGG | + | chr1_2:7422700-7422719 | None:intergenic | 25.0% |
| !! | ATAATAACGAGTATTTCTGA+TGG | - | chr1_2:7422724-7422743 | Msa0053010:intron | 25.0% |
| ! | AAAGTTTAGATGAATTGAGT+CGG | + | chr1_2:7422755-7422774 | None:intergenic | 25.0% |
| ! | AACGTCAATTACTTAATATC+TGG | - | chr1_2:7423027-7423046 | Msa0053010:intron | 25.0% |
| ! | AATTACTTAATATCTGGACT+TGG | - | chr1_2:7423033-7423052 | Msa0053010:intron | 25.0% |
| ! | GCAACAATACACATAAATAT+AGG | + | chr1_2:7423857-7423876 | None:intergenic | 25.0% |
| ! | TCTACATAACATTCCAAATT+AGG | + | chr1_2:7424250-7424269 | None:intergenic | 25.0% |
| !! | ACAATTATGCATAAACGTTT+TGG | + | chr1_2:7424496-7424515 | None:intergenic | 25.0% |
| ! | ATGCATAATTGTGAATGATA+AGG | - | chr1_2:7424504-7424523 | Msa0053010:five_prime_UTR | 25.0% |
| TTATTGAATGGTTAACGCTA+AGG | - | chr1_2:7415683-7415702 | Msa0053010:three_prime_UTR | 30.0% | |
| TATCTTCATCTTCATCATCT+TGG | - | chr1_2:7416334-7416353 | Msa0053010:intron | 30.0% | |
| ! | AAATCTCATTTTCTTCTGGT+TGG | - | chr1_2:7416371-7416390 | Msa0053010:intron | 30.0% |
| AGTGAATAGTCAAATTCTTC+TGG | + | chr1_2:7416404-7416423 | None:intergenic | 30.0% | |
| !! | CAACTTTGAAACTACACTTT+CGG | - | chr1_2:7416571-7416590 | Msa0053010:intron | 30.0% |
| ATTTGCACATAGCATAGAAA+AGG | + | chr1_2:7416766-7416785 | None:intergenic | 30.0% | |
| GAACTGAATCTCTTCTAATT+TGG | - | chr1_2:7416787-7416806 | Msa0053010:intron | 30.0% | |
| ATGGATGGTGAAAATTATGA+GGG | + | chr1_2:7416874-7416893 | None:intergenic | 30.0% | |
| AATGGATGGTGAAAATTATG+AGG | + | chr1_2:7416875-7416894 | None:intergenic | 30.0% | |
| TTGACACGAAGACAAAAAAA+TGG | + | chr1_2:7416893-7416912 | None:intergenic | 30.0% | |
| ! | TTATTTCTTCTCGAAAACAG+TGG | - | chr1_2:7416949-7416968 | Msa0053010:intron | 30.0% |
| TTATTGTATTGTGCCAATGA+AGG | + | chr1_2:7417236-7417255 | None:intergenic | 30.0% | |
| AATAGAGACAAAAATGAAGG+AGG | - | chr1_2:7417624-7417643 | Msa0053010:intron | 30.0% | |
| ATAGAGACAAAAATGAAGGA+GGG | - | chr1_2:7417625-7417644 | Msa0053010:intron | 30.0% | |
| !! | ATCTAGTTCCTTGTTATTGA+GGG | - | chr1_2:7417653-7417672 | Msa0053010:intron | 30.0% |
| CACAATGTTATTATCAGTGT+GGG | + | chr1_2:7417868-7417887 | None:intergenic | 30.0% | |
| TCACAATGTTATTATCAGTG+TGG | + | chr1_2:7417869-7417888 | None:intergenic | 30.0% | |
| GTTTGGAAAAAAAATCGATC+GGG | - | chr1_2:7418258-7418277 | Msa0053010:intron | 30.0% | |
| CCGCTATTCAACTTAATATT+AGG | - | chr1_2:7418447-7418466 | Msa0053010:intron | 30.0% | |
| ! | TATTAGGATAGTGGTCATAA+TGG | - | chr1_2:7418463-7418482 | Msa0053010:intron | 30.0% |
| ! | ATTAGGATAGTGGTCATAAT+GGG | - | chr1_2:7418464-7418483 | Msa0053010:intron | 30.0% |
| AGGTAATTCACTTCAAGTAT+TGG | - | chr1_2:7418774-7418793 | Msa0053010:CDS | 30.0% | |
| !! | CTAGGTTTTTAGATCGATAT+TGG | - | chr1_2:7418827-7418846 | Msa0053010:CDS | 30.0% |
| ACAATCACTTGATAAATCCT+TGG | + | chr1_2:7418931-7418950 | None:intergenic | 30.0% | |
| !! | AAATCGTCTTTTTGTCGTTT+GGG | - | chr1_2:7418991-7419010 | Msa0053010:CDS | 30.0% |
| TACCATGTTATTGCTAAGAT+GGG | + | chr1_2:7419185-7419204 | None:intergenic | 30.0% | |
| TTACCATGTTATTGCTAAGA+TGG | + | chr1_2:7419186-7419205 | None:intergenic | 30.0% | |
| !! | GCTCCAAATTGATTACTTTT+AGG | - | chr1_2:7419221-7419240 | Msa0053010:intron | 30.0% |
| !!! | TTTTTGTTGTTACTTTGTGG+GGG | - | chr1_2:7419279-7419298 | Msa0053010:intron | 30.0% |
| ! | ATAAGGTGATTTCTGATTTG+GGG | + | chr1_2:7419348-7419367 | None:intergenic | 30.0% |
| GATAAGGTGATTTCTGATTT+GGG | + | chr1_2:7419349-7419368 | None:intergenic | 30.0% | |
| TGATAAGGTGATTTCTGATT+TGG | + | chr1_2:7419350-7419369 | None:intergenic | 30.0% | |
| CATGCAATAAACGGAAATAA+TGG | + | chr1_2:7419459-7419478 | None:intergenic | 30.0% | |
| CATTATTTCCGTTTATTGCA+TGG | - | chr1_2:7419457-7419476 | Msa0053010:intron | 30.0% | |
| AGAAGTTCCTACAAGATTAT+CGG | + | chr1_2:7419513-7419532 | None:intergenic | 30.0% | |
| ATAATCTTGTAGGAACTTCT+TGG | - | chr1_2:7419513-7419532 | Msa0053010:intron | 30.0% | |
| TTTATACTCAATCACAGTAG+TGG | + | chr1_2:7419626-7419645 | None:intergenic | 30.0% | |
| TGGACAAAAAATAAGGCTTA+TGG | + | chr1_2:7419759-7419778 | None:intergenic | 30.0% | |
| TAGTGAGTGGACAAAAAATA+AGG | + | chr1_2:7419766-7419785 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTCCACTCACTAAT+TGG | - | chr1_2:7419768-7419787 | Msa0053010:intron | 30.0% |
| ATTTCGAGGAAAGTAAAGAT+GGG | + | chr1_2:7419855-7419874 | None:intergenic | 30.0% | |
| AATTTCGAGGAAAGTAAAGA+TGG | + | chr1_2:7419856-7419875 | None:intergenic | 30.0% | |
| ATGATACACACTTCTAGATT+TGG | - | chr1_2:7420185-7420204 | Msa0053010:intron | 30.0% | |
| ! | TTGATAATACCAGACTTTGT+CGG | - | chr1_2:7420443-7420462 | Msa0053010:intron | 30.0% |
| AATGACTTTAGATTAACACG+TGG | + | chr1_2:7420492-7420511 | None:intergenic | 30.0% | |
| AAAGTGAAGGTGATTCATAA+CGG | + | chr1_2:7420691-7420710 | None:intergenic | 30.0% | |
| GTTAAGGTTATGTAAAGTGA+AGG | + | chr1_2:7420704-7420723 | None:intergenic | 30.0% | |
| ! | GTAGATTATAAGGTGGTTTT+TGG | + | chr1_2:7420812-7420831 | None:intergenic | 30.0% |
| ! | GTGTTTTGTAGATTATAAGG+TGG | + | chr1_2:7420819-7420838 | None:intergenic | 30.0% |
| CTGAAATTAAATATCAGCGT+TGG | + | chr1_2:7420870-7420889 | None:intergenic | 30.0% | |
| TTTCAGATTGACCCTTATTA+AGG | - | chr1_2:7420884-7420903 | Msa0053010:intron | 30.0% | |
| GTTATTGTGTTCATTGTGAT+GGG | + | chr1_2:7421238-7421257 | None:intergenic | 30.0% | |
| TGTTATTGTGTTCATTGTGA+TGG | + | chr1_2:7421239-7421258 | None:intergenic | 30.0% | |
| ! | GGAGAAAGAAGAAGATTTTA+TGG | - | chr1_2:7421392-7421411 | Msa0053010:intron | 30.0% |
| !!! | ATCAATTTGGCTCTTTTCTT+AGG | + | chr1_2:7421447-7421466 | None:intergenic | 30.0% |
| GAAAGTAAAGCTTACATTGA+GGG | + | chr1_2:7421478-7421497 | None:intergenic | 30.0% | |
| GAGAATTAATCCTAATTGAG+AGG | - | chr1_2:7421602-7421621 | Msa0053010:intron | 30.0% | |
| TTGTTAATTAATACTCCCTC+CGG | - | chr1_2:7421703-7421722 | Msa0053010:intron | 30.0% | |
| !!! | TAGTTTTATCACATTTTGGG+AGG | + | chr1_2:7421940-7421959 | None:intergenic | 30.0% |
| ! | CTACATTTTCAATACCAAGA+AGG | - | chr1_2:7421957-7421976 | Msa0053010:intron | 30.0% |
| TCATGAATCAAATTAGGTCT+AGG | + | chr1_2:7422454-7422473 | None:intergenic | 30.0% | |
| TCCAAAAAATACTACTAGTG+AGG | - | chr1_2:7422615-7422634 | Msa0053010:CDS | 30.0% | |
| !!! | ACCTCACTAGTAGTATTTTT+TGG | + | chr1_2:7422619-7422638 | None:intergenic | 30.0% |
| TAAGTAATTGACGTTGAAGT+GGG | + | chr1_2:7423022-7423041 | None:intergenic | 30.0% | |
| TTAAGTAATTGACGTTGAAG+TGG | + | chr1_2:7423023-7423042 | None:intergenic | 30.0% | |
| AAACAAAAAACCAACAGAAG+AGG | + | chr1_2:7423084-7423103 | None:intergenic | 30.0% | |
| AGCAACTAAAGACGAAATTA+AGG | - | chr1_2:7423404-7423423 | Msa0053010:intron | 30.0% | |
| TATATTGTGACACTGGAAAT+TGG | - | chr1_2:7423541-7423560 | Msa0053010:intron | 30.0% | |
| GTTGTCTTTCCTTCTTTAAA+TGG | - | chr1_2:7423714-7423733 | Msa0053010:intron | 30.0% | |
| TATAGGAAGATGAATTGAAG+AGG | + | chr1_2:7423840-7423859 | None:intergenic | 30.0% | |
| GGAGAAGAAAATAACCAAAA+AGG | - | chr1_2:7423968-7423987 | Msa0053010:intron | 30.0% | |
| TAGTAAAATTGAGTCCTGTT+TGG | + | chr1_2:7424085-7424104 | None:intergenic | 30.0% | |
| TGGAAATGGTATAATAGCAA+AGG | - | chr1_2:7424336-7424355 | Msa0053010:five_prime_UTR | 30.0% | |
| !!! | AGCATAAAGCAAGAGTTTTT+TGG | + | chr1_2:7424368-7424387 | None:intergenic | 30.0% |
| CTATTGATGTGAGAAATGTT+GGG | - | chr1_2:7424392-7424411 | Msa0053010:intron | 30.0% | |
| TTGGAGAACAAAAATGAACA+TGG | + | chr1_2:7424477-7424496 | None:intergenic | 30.0% | |
| GTTTGGATTTGCAAAGAGAA+TGG | + | chr1_2:7415637-7415656 | None:intergenic | 35.0% | |
| !! | GGTTTATTTTCTGTGTTTGC+AGG | - | chr1_2:7415823-7415842 | Msa0053010:three_prime_UTR | 35.0% |
| !!! | GTTCAGAAGAGTGCATTTTT+TGG | - | chr1_2:7415887-7415906 | Msa0053010:three_prime_UTR | 35.0% |
| CAAAATCATTTGCAAGAGCA+AGG | + | chr1_2:7416499-7416518 | None:intergenic | 35.0% | |
| AAAACATGAAGAACACGAAG+AGG | + | chr1_2:7416695-7416714 | None:intergenic | 35.0% | |
| TGGATGGTGAAAATTATGAG+GGG | + | chr1_2:7416873-7416892 | None:intergenic | 35.0% | |
| CACGAAGACAAAAAAATGGA+TGG | + | chr1_2:7416889-7416908 | None:intergenic | 35.0% | |
| ! | TTTGATTTCGAAGCTCACTA+GGG | - | chr1_2:7417052-7417071 | Msa0053010:intron | 35.0% |
| GAAAACGTTTCTTTGAGCTT+TGG | + | chr1_2:7417090-7417109 | None:intergenic | 35.0% | |
| ATGATATAATGATGACAGGG+AGG | - | chr1_2:7417530-7417549 | Msa0053010:intron | 35.0% | |
| TAGAGACAAAAATGAAGGAG+GGG | - | chr1_2:7417626-7417645 | Msa0053010:intron | 35.0% | |
| !! | GATCTAGTTCCTTGTTATTG+AGG | - | chr1_2:7417652-7417671 | Msa0053010:intron | 35.0% |
| !! | GTCAGATTTGGTGTTACAAT+GGG | - | chr1_2:7417707-7417726 | Msa0053010:intron | 35.0% |
| !! | TCAGATTTGGTGTTACAATG+GGG | - | chr1_2:7417708-7417727 | Msa0053010:intron | 35.0% |
| ATTCTTTAAACCCGGTTCAA+AGG | - | chr1_2:7417775-7417794 | Msa0053010:intron | 35.0% | |
| AAAGATACTTCAAACCGGTT+TGG | - | chr1_2:7417837-7417856 | Msa0053010:intron | 35.0% | |
| CAATCAAGCAAGTCAAAAGA+GGG | + | chr1_2:7418012-7418031 | None:intergenic | 35.0% | |
| TCAATCAAGCAAGTCAAAAG+AGG | + | chr1_2:7418013-7418032 | None:intergenic | 35.0% | |
| ! | TGCATGTTAACTTGGAATCA+AGG | + | chr1_2:7418216-7418235 | None:intergenic | 35.0% |
| !! | TATAGCTTGCTAGTGTGTAA+AGG | + | chr1_2:7418648-7418667 | None:intergenic | 35.0% |
| CTTGTTGAGTCATTTGATCT+AGG | - | chr1_2:7418809-7418828 | Msa0053010:CDS | 35.0% | |
| ATTTGTATTGAAGGAGGACT+TGG | + | chr1_2:7418975-7418994 | None:intergenic | 35.0% | |
| AAGACGATTTGTATTGAAGG+AGG | + | chr1_2:7418981-7419000 | None:intergenic | 35.0% | |
| ! | CAAATCGTCTTTTTGTCGTT+TGG | - | chr1_2:7418990-7419009 | Msa0053010:CDS | 35.0% |
| TAGAACGACCATAGATGATT+AGG | - | chr1_2:7419032-7419051 | Msa0053010:CDS | 35.0% | |
| !! | TTTGGAGCACATTAGAGTTT+TGG | + | chr1_2:7419209-7419228 | None:intergenic | 35.0% |
| !!! | TTTTGTTGTTACTTTGTGGG+GGG | - | chr1_2:7419280-7419299 | Msa0053010:intron | 35.0% |
| TTAAATGACGTGGAGTGATA+AGG | + | chr1_2:7419365-7419384 | None:intergenic | 35.0% | |
| TCCGTTTATTGCATGGTTAA+TGG | - | chr1_2:7419464-7419483 | Msa0053010:intron | 35.0% | |
| GCCATTAACCATGCAATAAA+CGG | + | chr1_2:7419468-7419487 | None:intergenic | 35.0% | |
| ACAGTATCCGATAATCTTGT+AGG | - | chr1_2:7419503-7419522 | Msa0053010:intron | 35.0% | |
| ACTTCTTGGTAGAATTTGTG+TGG | - | chr1_2:7419527-7419546 | Msa0053010:intron | 35.0% | |
| TAATAGATTCATGTCTGCCA+CGG | - | chr1_2:7419553-7419572 | Msa0053010:intron | 35.0% | |
| ! | TGACGATATTTTGCTGCATT+TGG | - | chr1_2:7419702-7419721 | Msa0053010:intron | 35.0% |
| ! | GACGATATTTTGCTGCATTT+GGG | - | chr1_2:7419703-7419722 | Msa0053010:intron | 35.0% |
| TCTGCGAATATTATAGAGAC+TGG | - | chr1_2:7419929-7419948 | Msa0053010:intron | 35.0% | |
| ATGTCAAAGCAGTTGCAAAA+TGG | + | chr1_2:7420124-7420143 | None:intergenic | 35.0% | |
| AGAGGTTTACCGTAAATCTT+TGG | - | chr1_2:7420227-7420246 | Msa0053010:intron | 35.0% | |
| GAGGTTTACCGTAAATCTTT+GGG | - | chr1_2:7420228-7420247 | Msa0053010:intron | 35.0% | |
| AGGTTTACCGTAAATCTTTG+GGG | - | chr1_2:7420229-7420248 | Msa0053010:intron | 35.0% | |
| !! | GGGTTTGGTTTGATACTTTA+CGG | + | chr1_2:7420316-7420335 | None:intergenic | 35.0% |
| AAAACACAAATTGAGGGGTT+TGG | + | chr1_2:7420331-7420350 | None:intergenic | 35.0% | |
| TGATAATACCAGACTTTGTC+GGG | - | chr1_2:7420444-7420463 | Msa0053010:intron | 35.0% | |
| !!! | GTTGTAAATGGGTTTTGTTG+TGG | + | chr1_2:7420517-7420536 | None:intergenic | 35.0% |
| ATCATCCAACGGTTGTAAAT+GGG | + | chr1_2:7420528-7420547 | None:intergenic | 35.0% | |
| TATCATCCAACGGTTGTAAA+TGG | + | chr1_2:7420529-7420548 | None:intergenic | 35.0% | |
| TACGTGTTGGAATGAAGAAT+AGG | + | chr1_2:7420576-7420595 | None:intergenic | 35.0% | |
| ! | ATGGGCTATTGAAGAAAAGA+TGG | + | chr1_2:7420619-7420638 | None:intergenic | 35.0% |
| CTGGTTTCACGAAAGATTTA+GGG | + | chr1_2:7420662-7420681 | None:intergenic | 35.0% | |
| TTAGGTAGATAGAGAGATGT+TGG | + | chr1_2:7420738-7420757 | None:intergenic | 35.0% | |
| !! | AAGGTGGTTTTTGGATTGTT+CGG | + | chr1_2:7420803-7420822 | None:intergenic | 35.0% |
| GAGAAGTTGGAACAATAAAC+AGG | + | chr1_2:7420848-7420867 | None:intergenic | 35.0% | |
| TTGATGTTTAGGAACACAGA+AGG | - | chr1_2:7421120-7421139 | Msa0053010:intron | 35.0% | |
| TTCTTTCTCCTTGTTAGTCA+AGG | + | chr1_2:7421382-7421401 | None:intergenic | 35.0% | |
| GGAAAGTAAAGCTTACATTG+AGG | + | chr1_2:7421479-7421498 | None:intergenic | 35.0% | |
| TTGTCTCTTGTAAATAGGAC+CGG | + | chr1_2:7421725-7421744 | None:intergenic | 35.0% | |
| ATGTACACAAACAAAGACCA+AGG | + | chr1_2:7422222-7422241 | None:intergenic | 35.0% | |
| ! | TATTTACGTATGGCTTTTCC+AGG | + | chr1_2:7422329-7422348 | None:intergenic | 35.0% |
| GAAAAGCCATACGTAAATAG+TGG | - | chr1_2:7422330-7422349 | Msa0053010:CDS | 35.0% | |
| ACAGTACTTAATGTGAACCA+TGG | + | chr1_2:7422394-7422413 | None:intergenic | 35.0% | |
| ACTAGTGAGGTATATTCGTA+AGG | - | chr1_2:7422628-7422647 | Msa0053010:CDS | 35.0% | |
| ACCAATACTAACGAAGCAAT+CGG | + | chr1_2:7422854-7422873 | None:intergenic | 35.0% | |
| !! | AAGAAAAGAGGCACTTGATT+AGG | - | chr1_2:7422995-7423014 | Msa0053010:intron | 35.0% |
| ! | TTGCAATTTTCCTCTTCTGT+TGG | - | chr1_2:7423071-7423090 | Msa0053010:intron | 35.0% |
| TTTGACTAAATCCTCTTTCG+TGG | - | chr1_2:7423102-7423121 | Msa0053010:intron | 35.0% | |
| ! | TGGTTATATAGTCGATTTCG+AGG | - | chr1_2:7423268-7423287 | Msa0053010:intron | 35.0% |
| ! | GGTTATATAGTCGATTTCGA+GGG | - | chr1_2:7423269-7423288 | Msa0053010:intron | 35.0% |
| ! | GTTATATAGTCGATTTCGAG+GGG | - | chr1_2:7423270-7423289 | Msa0053010:intron | 35.0% |
| TCTTTAGTTGCTGTAACACT+TGG | + | chr1_2:7423396-7423415 | None:intergenic | 35.0% | |
| CCAGTGTCACAATATAAAGT+TGG | + | chr1_2:7423537-7423556 | None:intergenic | 35.0% | |
| CCAACTTTATATTGTGACAC+TGG | - | chr1_2:7423534-7423553 | Msa0053010:intron | 35.0% | |
| ! | TCAAGTTGTCGGTTAGTATA+TGG | + | chr1_2:7423684-7423703 | None:intergenic | 35.0% |
| TACTAACCGACAACTTGAAA+TGG | - | chr1_2:7423686-7423705 | Msa0053010:intron | 35.0% | |
| ACTAACCGACAACTTGAAAT+GGG | - | chr1_2:7423687-7423706 | Msa0053010:intron | 35.0% | |
| GAACAGCAACCATTTAAAGA+AGG | + | chr1_2:7423726-7423745 | None:intergenic | 35.0% | |
| ATATCGTTCCAAGGTAAGAT+CGG | + | chr1_2:7423940-7423959 | None:intergenic | 35.0% | |
| CTTGGAACGATATGAAGTTA+GGG | - | chr1_2:7423947-7423966 | Msa0053010:intron | 35.0% | |
| AAATTGAGTCCTGTTTGGTA+CGG | + | chr1_2:7424080-7424099 | None:intergenic | 35.0% | |
| AATGTTATGTAGAGACCAAG+AGG | - | chr1_2:7424257-7424276 | Msa0053010:intron | 35.0% | |
| CTTAAAAGCAATGGGTAACA+TGG | - | chr1_2:7424280-7424299 | Msa0053010:intron | 35.0% | |
| ATAGAAGAAGCAAGGAAATG+TGG | - | chr1_2:7424316-7424335 | Msa0053010:five_prime_UTR | 35.0% | |
| AAAACTCTTGCTTTATGCTG+TGG | - | chr1_2:7424369-7424388 | Msa0053010:five_prime_UTR | 35.0% | |
| GCTATTGATGTGAGAAATGT+TGG | - | chr1_2:7424391-7424410 | Msa0053010:intron | 35.0% | |
| CTTATCCTTCAGCTGAAAAT+GGG | + | chr1_2:7424532-7424551 | None:intergenic | 35.0% | |
| !! | AAGCTTCAAGCTTTAGATGT+CGG | - | chr1_2:7424549-7424568 | Msa0053010:five_prime_UTR | 35.0% |
| ! | CACGAAGAATCTTCTACTTT+TGG | + | chr1_2:7424633-7424652 | None:intergenic | 35.0% |
| TAGAAGATTCTTCGTGTTCA+CGG | - | chr1_2:7424637-7424656 | Msa0053010:five_prime_UTR | 35.0% | |
| CGATAGTTGTGAAGAAGTTC+TGG | - | chr1_2:7416306-7416325 | Msa0053010:intron | 40.0% | |
| TTCATCTTCATCATCTTGGC+AGG | - | chr1_2:7416338-7416357 | Msa0053010:intron | 40.0% | |
| TCATCTTCATCATCTTGGCA+GGG | - | chr1_2:7416339-7416358 | Msa0053010:intron | 40.0% | |
| ! | GTTTGATTTCGAAGCTCACT+AGG | - | chr1_2:7417051-7417070 | Msa0053010:intron | 40.0% |
| AACTCCTTACCAACCTTCAT+TGG | - | chr1_2:7417220-7417239 | Msa0053010:intron | 40.0% | |
| TGTATTGTGCCAATGAAGGT+TGG | + | chr1_2:7417232-7417251 | None:intergenic | 40.0% | |
| GCAAGACTACAATTAGGTCA+GGG | + | chr1_2:7417329-7417348 | None:intergenic | 40.0% | |
| TGCAAGACTACAATTAGGTC+AGG | + | chr1_2:7417330-7417349 | None:intergenic | 40.0% | |
| ATATAATGATGACAGGGAGG+AGG | - | chr1_2:7417533-7417552 | Msa0053010:intron | 40.0% | |
| TATAATGATGACAGGGAGGA+GGG | - | chr1_2:7417534-7417553 | Msa0053010:intron | 40.0% | |
| ! | CAATGTTGTTGCTGTTGTCA+TGG | + | chr1_2:7417587-7417606 | None:intergenic | 40.0% |
| ACAATCATCCACGTCAGATT+TGG | - | chr1_2:7417695-7417714 | Msa0053010:intron | 40.0% | |
| TTGTAACACCAAATCTGACG+TGG | + | chr1_2:7417706-7417725 | None:intergenic | 40.0% | |
| !! | CGTCAGATTTGGTGTTACAA+TGG | - | chr1_2:7417706-7417725 | Msa0053010:intron | 40.0% |
| !! | CAGATTTGGTGTTACAATGG+GGG | - | chr1_2:7417709-7417728 | Msa0053010:intron | 40.0% |
| ! | CCGGTTTGAAGTATCTTTCT+CGG | + | chr1_2:7417835-7417854 | None:intergenic | 40.0% |
| CCGAGAAAGATACTTCAAAC+CGG | - | chr1_2:7417832-7417851 | Msa0053010:intron | 40.0% | |
| TGATGTGAGTTGTGACATGA+AGG | - | chr1_2:7418089-7418108 | Msa0053010:intron | 40.0% | |
| ATTGTGATTAAGTGCGTGCT+TGG | - | chr1_2:7418136-7418155 | Msa0053010:intron | 40.0% | |
| TGAGTTTGAGAGAATCACAG+TGG | - | chr1_2:7418167-7418186 | Msa0053010:intron | 40.0% | |
| ACACTCGATGCATGTTAACT+TGG | + | chr1_2:7418224-7418243 | None:intergenic | 40.0% | |
| AAGTTAACATGCATCGAGTG+TGG | - | chr1_2:7418223-7418242 | Msa0053010:intron | 40.0% | |
| ! | TGTGGTGTTCGATTTGAGTT+TGG | - | chr1_2:7418241-7418260 | Msa0053010:intron | 40.0% |
| CTATAAGCATAGCTCTTGCT+CGG | - | chr1_2:7418663-7418682 | Msa0053010:intron | 40.0% | |
| TCTCGTCTGTATCAAATCCA+AGG | - | chr1_2:7418911-7418930 | Msa0053010:CDS | 40.0% | |
| GTCGTTCTACAAACAACTGA+GGG | + | chr1_2:7419021-7419040 | None:intergenic | 40.0% | |
| CGATAGGTCCTAATCATCTA+TGG | + | chr1_2:7419043-7419062 | None:intergenic | 40.0% | |
| TTGTTCTCCTGAAGACCTTT+AGG | - | chr1_2:7419147-7419166 | Msa0053010:intron | 40.0% | |
| ! | TCCTGAAGACCTTTAGGTTA+TGG | - | chr1_2:7419153-7419172 | Msa0053010:intron | 40.0% |
| TCCATAACCTAAAGGTCTTC+AGG | + | chr1_2:7419157-7419176 | None:intergenic | 40.0% | |
| GTCCCATCTTAGCAATAACA+TGG | - | chr1_2:7419180-7419199 | Msa0053010:intron | 40.0% | |
| !! | TTTGTTGTTACTTTGTGGGG+GGG | - | chr1_2:7419281-7419300 | Msa0053010:intron | 40.0% |
| TTGTCCACTCACTAATTGGT+AGG | - | chr1_2:7419772-7419791 | Msa0053010:intron | 40.0% | |
| ATTCGGATGAGACATTTGTG+AGG | + | chr1_2:7419799-7419818 | None:intergenic | 40.0% | |
| CGTGAGCTGATCGTTTAATT+CGG | + | chr1_2:7419816-7419835 | None:intergenic | 40.0% | |
| CGAATTAAACGATCAGCTCA+CGG | - | chr1_2:7419814-7419833 | Msa0053010:intron | 40.0% | |
| ACTAACTGCTTTACACCTTG+TGG | - | chr1_2:7420274-7420293 | Msa0053010:intron | 40.0% | |
| GTTTCAGATCTAGATCCACA+AGG | + | chr1_2:7420292-7420311 | None:intergenic | 40.0% | |
| GACTTTAGATTAACACGTGG+AGG | + | chr1_2:7420489-7420508 | None:intergenic | 40.0% | |
| CAAAACCCATTTACAACCGT+TGG | - | chr1_2:7420520-7420539 | Msa0053010:intron | 40.0% | |
| !! | ACACTTGGTGTATCATCCAA+CGG | + | chr1_2:7420539-7420558 | None:intergenic | 40.0% |
| GATACACCAAGTGTTAGATC+TGG | - | chr1_2:7420545-7420564 | Msa0053010:intron | 40.0% | |
| !! | GTTGGATCTGGATGGATTAT+GGG | + | chr1_2:7420637-7420656 | None:intergenic | 40.0% |
| CATAATCCATCCAGATCCAA+CGG | - | chr1_2:7420636-7420655 | Msa0053010:intron | 40.0% | |
| ! | GCTGGTTTCACGAAAGATTT+AGG | + | chr1_2:7420663-7420682 | None:intergenic | 40.0% |
| ! | AATATCAGCGTTGGAGAAGT+TGG | + | chr1_2:7420861-7420880 | None:intergenic | 40.0% |
| TTTAGGAACACAGAAGGTTC+AGG | - | chr1_2:7421126-7421145 | Msa0053010:intron | 40.0% | |
| ATGAGAGGAACACAAACCAA+CGG | - | chr1_2:7421153-7421172 | Msa0053010:intron | 40.0% | |
| !! | ACAAACCAACGGAAGTGTTA+GGG | - | chr1_2:7421164-7421183 | Msa0053010:intron | 40.0% |
| ! | AGCTTCATCTGATAACGCTT+TGG | - | chr1_2:7421278-7421297 | Msa0053010:intron | 40.0% |
| ! | TCATCTGATAACGCTTTGGA+TGG | - | chr1_2:7421282-7421301 | Msa0053010:intron | 40.0% |
| ! | CATCTGATAACGCTTTGGAT+GGG | - | chr1_2:7421283-7421302 | Msa0053010:intron | 40.0% |
| AAGGCAATCACAAACTTTGG+TGG | + | chr1_2:7421363-7421382 | None:intergenic | 40.0% | |
| GTCAAGGCAATCACAAACTT+TGG | + | chr1_2:7421366-7421385 | None:intergenic | 40.0% | |
| TGTGATTGCCTTGACTAACA+AGG | - | chr1_2:7421371-7421390 | Msa0053010:intron | 40.0% | |
| ! | GCTCTTTTCTTAGGTCTTTG+AGG | + | chr1_2:7421438-7421457 | None:intergenic | 40.0% |
| ! | GAGGGTACGTTGTATCAATT+TGG | + | chr1_2:7421460-7421479 | None:intergenic | 40.0% |
| TCTCTTGTAAATAGGACCTG+AGG | - | chr1_2:7421837-7421856 | Msa0053010:intron | 40.0% | |
| CTCTTGTAAATAGGACCTGA+GGG | - | chr1_2:7421838-7421857 | Msa0053010:intron | 40.0% | |
| GAGTACGTGATAAACAAGGA+TGG | - | chr1_2:7421860-7421879 | Msa0053010:intron | 40.0% | |
| TCTCAAAAGGGTTGTAGTGA+TGG | - | chr1_2:7422084-7422103 | Msa0053010:intron | 40.0% | |
| ! | ATGGCTTTTCCAGGCATATA+GGG | + | chr1_2:7422320-7422339 | None:intergenic | 40.0% |
| ! | TATGGCTTTTCCAGGCATAT+AGG | + | chr1_2:7422321-7422340 | None:intergenic | 40.0% |
| AGCCATACGTAAATAGTGGT+TGG | - | chr1_2:7422334-7422353 | Msa0053010:CDS | 40.0% | |
| TGCCAACCACTATTTACGTA+TGG | + | chr1_2:7422339-7422358 | None:intergenic | 40.0% | |
| AAATAGTGGTTGGCAGCTTA+TGG | - | chr1_2:7422344-7422363 | Msa0053010:CDS | 40.0% | |
| CCTCTTATTACAACGAGTTC+AGG | + | chr1_2:7422533-7422552 | None:intergenic | 40.0% | |
| CCTGAACTCGTTGTAATAAG+AGG | - | chr1_2:7422530-7422549 | Msa0053010:CDS | 40.0% | |
| ATCAACGTGCAACTTGCATT+TGG | + | chr1_2:7422815-7422834 | None:intergenic | 40.0% | |
| AAATGCAAGTTGCACGTTGA+TGG | - | chr1_2:7422814-7422833 | Msa0053010:intron | 40.0% | |
| TCCGATTGCTTCGTTAGTAT+TGG | - | chr1_2:7422850-7422869 | Msa0053010:intron | 40.0% | |
| ! | GATTGCTTCGTTAGTATTGG+TGG | - | chr1_2:7422853-7422872 | Msa0053010:intron | 40.0% |
| GGGTAGAGAAAGAAGAAAAG+AGG | - | chr1_2:7422983-7423002 | Msa0053010:intron | 40.0% | |
| AGTATGTAGAACCACGAAAG+AGG | + | chr1_2:7423116-7423135 | None:intergenic | 40.0% | |
| !! | TCGTACTCTAAAGCAGTTTG+TGG | - | chr1_2:7423498-7423517 | Msa0053010:intron | 40.0% |
| ! | TCTAAAGCAGTTTGTGGTCT+AGG | - | chr1_2:7423504-7423523 | Msa0053010:intron | 40.0% |
| ! | TCTTTTCTTAGTACAGTGCG+TGG | + | chr1_2:7423651-7423670 | None:intergenic | 40.0% |
| !! | CTCATCCCATTTCAAGTTGT+CGG | + | chr1_2:7423695-7423714 | None:intergenic | 40.0% |
| CCTAACTTCATATCGTTCCA+AGG | + | chr1_2:7423949-7423968 | None:intergenic | 40.0% | |
| CCTTGGAACGATATGAAGTT+AGG | - | chr1_2:7423946-7423965 | Msa0053010:intron | 40.0% | |
| TTATGAACTCCGTACCAAAC+AGG | - | chr1_2:7424068-7424087 | Msa0053010:intron | 40.0% | |
| ACCAAGAGGCTTAAAAGCAA+TGG | - | chr1_2:7424271-7424290 | Msa0053010:intron | 40.0% | |
| CCAAGAGGCTTAAAAGCAAT+GGG | - | chr1_2:7424272-7424291 | Msa0053010:intron | 40.0% | |
| GACTCTGAATAGAAGAAGCA+AGG | - | chr1_2:7424308-7424327 | Msa0053010:five_prime_UTR | 40.0% | |
| GAAGCAAGGAAATGTGGAAA+TGG | - | chr1_2:7424322-7424341 | Msa0053010:five_prime_UTR | 40.0% | |
| AACATGGCTGTGAGAAAAAC+AGG | + | chr1_2:7424461-7424480 | None:intergenic | 40.0% | |
| GCTTATCCTTCAGCTGAAAA+TGG | + | chr1_2:7424533-7424552 | None:intergenic | 40.0% | |
| AGAAGATTCTTCGTGTTCAC+GGG | - | chr1_2:7424638-7424657 | Msa0053010:five_prime_UTR | 40.0% | |
| ACATGAAGAACACGAAGAGG+AGG | + | chr1_2:7416692-7416711 | None:intergenic | 45.0% | |
| CTTCCTTTGCACTATTCCCA+TGG | - | chr1_2:7416917-7416936 | Msa0053010:intron | 45.0% | |
| TAGCCATGGGAATAGTGCAA+AGG | + | chr1_2:7416923-7416942 | None:intergenic | 45.0% | |
| AGAAGCCACCAATGTTCTTG+CGG | - | chr1_2:7417186-7417205 | Msa0053010:intron | 45.0% | |
| ATATCCCGCAAGAACATTGG+TGG | + | chr1_2:7417194-7417213 | None:intergenic | 45.0% | |
| ACCAATGTTCTTGCGGGATA+TGG | - | chr1_2:7417193-7417212 | Msa0053010:intron | 45.0% | |
| TCCATATCCCGCAAGAACAT+TGG | + | chr1_2:7417197-7417216 | None:intergenic | 45.0% | |
| !! | TGTGCCAATGAAGGTTGGTA+AGG | + | chr1_2:7417227-7417246 | None:intergenic | 45.0% |
| GACAAAAATGAAGGAGGGGA+TGG | - | chr1_2:7417630-7417649 | Msa0053010:intron | 45.0% | |
| TGAGCTAGCCCTCAATAACA+AGG | + | chr1_2:7417664-7417683 | None:intergenic | 45.0% | |
| !! | TTATTGAGGGCTAGCTCAGA+TGG | - | chr1_2:7417666-7417685 | Msa0053010:intron | 45.0% |
| GAAGCGATTAAGGTGCATGA+AGG | - | chr1_2:7417737-7417756 | Msa0053010:intron | 45.0% | |
| AAACCCGGTTCAAAGGACAA+CGG | - | chr1_2:7417782-7417801 | Msa0053010:intron | 45.0% | |
| AAGTACCTGAGAATCCTTGG+AGG | + | chr1_2:7417972-7417991 | None:intergenic | 45.0% | |
| GACAAGTACCTGAGAATCCT+TGG | + | chr1_2:7417975-7417994 | None:intergenic | 45.0% | |
| TAAGTGCGTGCTTGGATTTG+CGG | - | chr1_2:7418144-7418163 | Msa0053010:intron | 45.0% | |
| AGTGTGTAAAGGTAGCAGTG+TGG | + | chr1_2:7418637-7418656 | None:intergenic | 45.0% | |
| GGACTATGGAAGGAAGACTT+GGG | - | chr1_2:7418684-7418703 | Msa0053010:intron | 45.0% | |
| AATTACCTCCCCAACTTGGT+TGG | + | chr1_2:7418762-7418781 | None:intergenic | 45.0% | |
| AGTGAATTACCTCCCCAACT+TGG | + | chr1_2:7418766-7418785 | None:intergenic | 45.0% | |
| GGTCGTTCTACAAACAACTG+AGG | + | chr1_2:7419022-7419041 | None:intergenic | 45.0% | |
| GGGACTGATCCATAACCTAA+AGG | + | chr1_2:7419165-7419184 | None:intergenic | 45.0% | |
| TTGGGGAGGGACATTTGAAT+TGG | + | chr1_2:7419331-7419350 | None:intergenic | 45.0% | |
| !! | GGTGATTTCTGATTTGGGGA+GGG | + | chr1_2:7419344-7419363 | None:intergenic | 45.0% |
| !! | AGGTGATTTCTGATTTGGGG+AGG | + | chr1_2:7419345-7419364 | None:intergenic | 45.0% |
| AGGACCTACCAATTAGTGAG+TGG | + | chr1_2:7419779-7419798 | None:intergenic | 45.0% | |
| TTTCATGTCCCGACAAAGTC+TGG | + | chr1_2:7420455-7420474 | None:intergenic | 45.0% | |
| TTTGTCGGGACATGAAACAG+AGG | - | chr1_2:7420458-7420477 | Msa0053010:intron | 45.0% | |
| TTGTCGGGACATGAAACAGA+GGG | - | chr1_2:7420459-7420478 | Msa0053010:intron | 45.0% | |
| GACGTACCAGATCTAACACT+TGG | + | chr1_2:7420554-7420573 | None:intergenic | 45.0% | |
| !! | CGTTGGATCTGGATGGATTA+TGG | + | chr1_2:7420638-7420657 | None:intergenic | 45.0% |
| !! | TGATTCATAACGGACACAGC+TGG | + | chr1_2:7420681-7420700 | None:intergenic | 45.0% |
| GTTGGAGAGACACAACGTTA+AGG | + | chr1_2:7420720-7420739 | None:intergenic | 45.0% | |
| !! | CACAAACCAACGGAAGTGTT+AGG | - | chr1_2:7421163-7421182 | Msa0053010:intron | 45.0% |
| !! | CAAACCAACGGAAGTGTTAG+GGG | - | chr1_2:7421165-7421184 | Msa0053010:intron | 45.0% |
| AATTCCCCTAACACTTCCGT+TGG | + | chr1_2:7421172-7421191 | None:intergenic | 45.0% | |
| AGGGTTGGACATGAGAAAAG+AGG | - | chr1_2:7421204-7421223 | Msa0053010:intron | 45.0% | |
| GGGTTGGACATGAGAAAAGA+GGG | - | chr1_2:7421205-7421224 | Msa0053010:intron | 45.0% | |
| !! | GTGTTCATTGTGATGGGTGT+GGG | + | chr1_2:7421232-7421251 | None:intergenic | 45.0% |
| !! | TGTGTTCATTGTGATGGGTG+TGG | + | chr1_2:7421233-7421252 | None:intergenic | 45.0% |
| ! | AACGCTTTGGATGGGAAGAA+AGG | - | chr1_2:7421291-7421310 | Msa0053010:intron | 45.0% |
| CTCTTGTAAATAGGACCGGA+GGG | + | chr1_2:7421721-7421740 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | + | chr1_2:7421722-7421741 | None:intergenic | 45.0% | |
| TGTTTATCACGTACTCCCTC+AGG | + | chr1_2:7421856-7421875 | None:intergenic | 45.0% | |
| ! | GAGGGAGTACGTGATAAACA+AGG | - | chr1_2:7421856-7421875 | Msa0053010:intron | 45.0% |
| TCCTTTGAACCCTATATGCC+TGG | - | chr1_2:7422308-7422327 | Msa0053010:CDS | 45.0% | |
| TCCAGGCATATAGGGTTCAA+AGG | + | chr1_2:7422312-7422331 | None:intergenic | 45.0% | |
| GATTGCTATACACGCGTCAA+CGG | - | chr1_2:7422366-7422385 | Msa0053010:CDS | 45.0% | |
| ATTGCTATACACGCGTCAAC+GGG | - | chr1_2:7422367-7422386 | Msa0053010:CDS | 45.0% | |
| !! | AAGTTGCACGTTGATGGTAG+AGG | - | chr1_2:7422820-7422839 | Msa0053010:intron | 45.0% |
| !! | TGCTTCGTTAGTATTGGTGG+TGG | - | chr1_2:7422856-7422875 | Msa0053010:intron | 45.0% |
| !! | TATTGGTGGTGGAGCTATCT+AGG | - | chr1_2:7422867-7422886 | Msa0053010:intron | 45.0% |
| !! | ATTGGTGGTGGAGCTATCTA+GGG | - | chr1_2:7422868-7422887 | Msa0053010:intron | 45.0% |
| GGAAATTGGATGTGCTGTGT+TGG | - | chr1_2:7423555-7423574 | Msa0053010:intron | 45.0% | |
| GATGTGCTGTGTTGGAAACA+TGG | - | chr1_2:7423563-7423582 | Msa0053010:intron | 45.0% | |
| TGCTGTGTTGGAAACATGGA+TGG | - | chr1_2:7423567-7423586 | Msa0053010:intron | 45.0% | |
| GTATTGCAGCTTGTAAGTCC+AGG | - | chr1_2:7423903-7423922 | Msa0053010:five_prime_UTR | 45.0% | |
| AGCTTGTAAGTCCAGGTACA+TGG | - | chr1_2:7423910-7423929 | Msa0053010:five_prime_UTR | 45.0% | |
| ATGGCTATCCGATCTTACCT+TGG | - | chr1_2:7423929-7423948 | Msa0053010:intron | 45.0% | |
| !! | CCCATTGCTTTTAAGCCTCT+TGG | + | chr1_2:7424275-7424294 | None:intergenic | 45.0% |
| ! | AGGAACCCATTTTCAGCTGA+AGG | - | chr1_2:7424524-7424543 | Msa0053010:five_prime_UTR | 45.0% |
| !!! | TTTTTTCTAATAAAAAATTT+AGG | - | chr1_2:7417025-7417044 | Msa0053010:intron | 5.0% |
| !!! | ATATAGTAAAATAAATATTT+TGG | - | chr1_2:7422962-7422981 | Msa0053010:intron | 5.0% |
| !!! | TATAGTAAAATAAATATTTT+GGG | - | chr1_2:7422963-7422982 | Msa0053010:intron | 5.0% |
| !!! | TATTTTTATGTTTATTATTT+AGG | - | chr1_2:7423192-7423211 | Msa0053010:intron | 5.0% |
| !!! | AAATAAAAAAAATTAGTTTA+GGG | + | chr1_2:7424019-7424038 | None:intergenic | 5.0% |
| TGAAGAACACGAAGAGGAGG+AGG | + | chr1_2:7416689-7416708 | None:intergenic | 50.0% | |
| GAAGCCACCAATGTTCTTGC+GGG | - | chr1_2:7417187-7417206 | Msa0053010:intron | 50.0% | |
| !! | TGGTGTTACAATGGGGGAAC+AGG | - | chr1_2:7417715-7417734 | Msa0053010:intron | 50.0% |
| GAACCGTTGTCCTTTGAACC+GGG | + | chr1_2:7417788-7417807 | None:intergenic | 50.0% | |
| CGAACCGTTGTCCTTTGAAC+CGG | + | chr1_2:7417789-7417808 | None:intergenic | 50.0% | |
| TCAAAGGACAACGGTTCGAG+TGG | - | chr1_2:7417791-7417810 | Msa0053010:intron | 50.0% | |
| TCTCGGTCCTAATTACCCTC+CGG | + | chr1_2:7417818-7417837 | None:intergenic | 50.0% | |
| CAGTGTGGGATGTTCCAAAC+CGG | + | chr1_2:7417854-7417873 | None:intergenic | 50.0% | |
| AACCTCCTCCAAGGATTCTC+AGG | - | chr1_2:7417964-7417983 | Msa0053010:intron | 50.0% | |
| TACCTGAGAATCCTTGGAGG+AGG | + | chr1_2:7417969-7417988 | None:intergenic | 50.0% | |
| TTGTGATTGCTGCGCGATTG+TGG | - | chr1_2:7418317-7418336 | Msa0053010:intron | 50.0% | |
| CATAGCTCTTGCTCGGACTA+TGG | - | chr1_2:7418670-7418689 | Msa0053010:intron | 50.0% | |
| CGGACTATGGAAGGAAGACT+TGG | - | chr1_2:7418683-7418702 | Msa0053010:intron | 50.0% | |
| ACCAGCGTCATTGGCCAAAA+GGG | + | chr1_2:7418737-7418756 | None:intergenic | 50.0% | |
| CTGAAGATTCAAACCCCCTC+AGG | + | chr1_2:7419583-7419602 | None:intergenic | 50.0% | |
| ! | CCTTAAAACTATCCGGCTCG+AGG | + | chr1_2:7419957-7419976 | None:intergenic | 50.0% |
| !! | CCTCGAGCCGGATAGTTTTA+AGG | - | chr1_2:7419954-7419973 | Msa0053010:intron | 50.0% |
| ! | AGATTTAGGGCCGTTGGATC+TGG | + | chr1_2:7420649-7420668 | None:intergenic | 50.0% |
| ! | CACGAAAGATTTAGGGCCGT+TGG | + | chr1_2:7420655-7420674 | None:intergenic | 50.0% |
| ! | GAAGGTTCAGGTGCTATGAG+AGG | - | chr1_2:7421138-7421157 | Msa0053010:intron | 50.0% |
| TTCTCATGTCCAACCCTCTC+TGG | + | chr1_2:7421201-7421220 | None:intergenic | 50.0% | |
| ! | GCTTTGGATGGGAAGAAAGG+TGG | - | chr1_2:7421294-7421313 | Msa0053010:intron | 50.0% |
| TTGGATGGGAAGAAAGGTGG+AGG | - | chr1_2:7421297-7421316 | Msa0053010:intron | 50.0% | |
| TGGATGGGAAGAAAGGTGGA+GGG | - | chr1_2:7421298-7421317 | Msa0053010:intron | 50.0% | |
| AAAGGTGGAGGGTCATCTTC+TGG | - | chr1_2:7421309-7421328 | Msa0053010:intron | 50.0% | |
| AAGGTGGAGGGTCATCTTCT+GGG | - | chr1_2:7421310-7421329 | Msa0053010:intron | 50.0% | |
| ! | GAGTGGTGATGCTACTCCAT+CGG | - | chr1_2:7421332-7421351 | Msa0053010:intron | 50.0% |
| CAACGAGTTCAGGACCGAAT+TGG | + | chr1_2:7422523-7422542 | None:intergenic | 50.0% | |
| !! | TTGGTGGTGGAGCTATCTAG+GGG | - | chr1_2:7422869-7422888 | Msa0053010:intron | 50.0% |
| GAAACATGGATGGAGCAAGC+TGG | - | chr1_2:7423577-7423596 | Msa0053010:intron | 50.0% | |
| AGATCGGATAGCCATGTACC+TGG | + | chr1_2:7423924-7423943 | None:intergenic | 50.0% | |
| !! | GGAGGAGGGAGTGATGGATA+AGG | - | chr1_2:7417548-7417567 | Msa0053010:intron | 55.0% |
| GGGGGAACAGGAAGCGATTA+AGG | - | chr1_2:7417727-7417746 | Msa0053010:intron | 55.0% | |
| GAGTGGACCGGAGGGTAATT+AGG | - | chr1_2:7417808-7417827 | Msa0053010:intron | 55.0% | |
| AGGAGGTTGCTGTGGAGAAG+GGG | + | chr1_2:7417952-7417971 | None:intergenic | 55.0% | |
| GAGGAGGTTGCTGTGGAGAA+GGG | + | chr1_2:7417953-7417972 | None:intergenic | 55.0% | |
| ATCCTTGGAGGAGGTTGCTG+TGG | + | chr1_2:7417960-7417979 | None:intergenic | 55.0% | |
| GCTCTTGCTCGGACTATGGA+AGG | - | chr1_2:7418674-7418693 | Msa0053010:intron | 55.0% | |
| GATACTTGCCCTCCAGCTCT+GGG | - | chr1_2:7418706-7418725 | Msa0053010:intron | 55.0% | |
| AAAAGGGAGCTACCCAGAGC+TGG | + | chr1_2:7418721-7418740 | None:intergenic | 55.0% | |
| !!! | AGCTCTGGGTAGCTCCCTTT+TGG | - | chr1_2:7418720-7418739 | Msa0053010:intron | 55.0% |
| ! | TCCCTTTTGGCCAATGACGC+TGG | - | chr1_2:7418733-7418752 | Msa0053010:intron | 55.0% |
| CACCAGCGTCATTGGCCAAA+AGG | + | chr1_2:7418738-7418757 | None:intergenic | 55.0% | |
| TGGTTGGACACCAGCGTCAT+TGG | + | chr1_2:7418746-7418765 | None:intergenic | 55.0% | |
| ACGCTGGTGTCCAACCAAGT+TGG | - | chr1_2:7418749-7418768 | Msa0053010:intron | 55.0% | |
| CGCTGGTGTCCAACCAAGTT+GGG | - | chr1_2:7418750-7418769 | Msa0053010:intron | 55.0% | |
| GCTGGTGTCCAACCAAGTTG+GGG | - | chr1_2:7418751-7418770 | Msa0053010:intron | 55.0% | |
| TGTCTGCCACGGATTTCCTG+AGG | - | chr1_2:7419564-7419583 | Msa0053010:intron | 55.0% | |
| GTCTGCCACGGATTTCCTGA+GGG | - | chr1_2:7419565-7419584 | Msa0053010:intron | 55.0% | |
| TCTGCCACGGATTTCCTGAG+GGG | - | chr1_2:7419566-7419585 | Msa0053010:intron | 55.0% | |
| AAACCCCCTCAGGAAATCCG+TGG | + | chr1_2:7419573-7419592 | None:intergenic | 55.0% | |
| ! | TAGAGACTGGTTCCTCGAGC+CGG | - | chr1_2:7419942-7419961 | Msa0053010:intron | 55.0% |
| TTAGGGCCGTTGGATCTGGA+TGG | + | chr1_2:7420645-7420664 | None:intergenic | 55.0% | |
| GGGAATTGCCTCACCAGAGA+GGG | - | chr1_2:7421185-7421204 | Msa0053010:intron | 55.0% | |
| ATTGCCTCACCAGAGAGGGT+TGG | - | chr1_2:7421189-7421208 | Msa0053010:intron | 55.0% | |
| ATGTCCAACCCTCTCTGGTG+AGG | + | chr1_2:7421196-7421215 | None:intergenic | 55.0% | |
| GTGATGCTACTCCATCGGTG+TGG | - | chr1_2:7421337-7421356 | Msa0053010:intron | 55.0% | |
| ! | AACTTTGGTGGCCACACCGA+TGG | + | chr1_2:7421351-7421370 | None:intergenic | 55.0% |
| GGATGGAGCAAGCTGGATAG+TGG | - | chr1_2:7423584-7423603 | Msa0053010:intron | 55.0% | |
| TGACAGGGAGGAGGGAGTGA+TGG | - | chr1_2:7417542-7417561 | Msa0053010:intron | 60.0% | |
| GGACAACGGTTCGAGTGGAC+CGG | - | chr1_2:7417796-7417815 | Msa0053010:intron | 60.0% | |
| AACGGTTCGAGTGGACCGGA+GGG | - | chr1_2:7417800-7417819 | Msa0053010:intron | 60.0% | |
| GGGGCACGTTGACGAAGACT+AGG | + | chr1_2:7417933-7417952 | None:intergenic | 60.0% | |
| GGAGGAGGTTGCTGTGGAGA+AGG | + | chr1_2:7417954-7417973 | None:intergenic | 60.0% | |
| CTCCACAGCAACCTCCTCCA+AGG | - | chr1_2:7417955-7417974 | Msa0053010:intron | 60.0% | |
| TTGCTGCGCGATTGTGGTCG+AGG | - | chr1_2:7418323-7418342 | Msa0053010:intron | 60.0% | |
| GGATACTTGCCCTCCAGCTC+TGG | - | chr1_2:7418705-7418724 | Msa0053010:intron | 60.0% | |
| ! | GGTGTCCAACCAAGTTGGGG+AGG | - | chr1_2:7418754-7418773 | Msa0053010:CDS | 60.0% |
| CTGCCACGGATTTCCTGAGG+GGG | - | chr1_2:7419567-7419586 | Msa0053010:intron | 60.0% | |
| GGGGAATTGCCTCACCAGAG+AGG | - | chr1_2:7421184-7421203 | Msa0053010:intron | 60.0% | |
| ! | GGAGGGTCATCTTCTGGGAG+TGG | - | chr1_2:7421315-7421334 | Msa0053010:intron | 60.0% |
| TACACGCGTCAACGGGACCA+TGG | - | chr1_2:7422374-7422393 | Msa0053010:CDS | 60.0% | |
| CAACGGTTCGAGTGGACCGG+AGG | - | chr1_2:7417799-7417818 | Msa0053010:intron | 65.0% | |
| GGGAGCTACCCAGAGCTGGA+GGG | + | chr1_2:7418717-7418736 | None:intergenic | 65.0% | |
| AGGGAGCTACCCAGAGCTGG+AGG | + | chr1_2:7418718-7418737 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 7415553 | 7424681 | 7415553 | ID=Msa0053010;Name=Msa0053010 |
| chr1_2 | mRNA | 7415553 | 7424681 | 7415553 | ID=Msa0053010-mRNA-1;Parent=Msa0053010;Name=Msa0053010-mRNA-1;_AED=0.13;_eAED=0.13;_QI=508|1|1|1|0.42|0.37|8|362|301 |
| chr1_2 | exon | 7415553 | 7415965 | 7415553 | ID=Msa0053010-mRNA-1:exon:2551;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7416245 | 7416322 | 7416245 | ID=Msa0053010-mRNA-1:exon:2550;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7418752 | 7419103 | 7418752 | ID=Msa0053010-mRNA-1:exon:2549;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7422249 | 7422686 | 7422249 | ID=Msa0053010-mRNA-1:exon:2548;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7423807 | 7423938 | 7423807 | ID=Msa0053010-mRNA-1:exon:2547;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7424106 | 7424200 | 7424106 | ID=Msa0053010-mRNA-1:exon:2546;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7424303 | 7424389 | 7424303 | ID=Msa0053010-mRNA-1:exon:2545;Parent=Msa0053010-mRNA-1 |
| chr1_2 | exon | 7424501 | 7424681 | 7424501 | ID=Msa0053010-mRNA-1:exon:2544;Parent=Msa0053010-mRNA-1 |
| chr1_2 | five_prime_UTR | 7424501 | 7424681 | 7424501 | ID=Msa0053010-mRNA-1:five_prime_utr;Parent=Msa0053010-mRNA-1 |
| chr1_2 | five_prime_UTR | 7424303 | 7424389 | 7424303 | ID=Msa0053010-mRNA-1:five_prime_utr;Parent=Msa0053010-mRNA-1 |
| chr1_2 | five_prime_UTR | 7424106 | 7424200 | 7424106 | ID=Msa0053010-mRNA-1:five_prime_utr;Parent=Msa0053010-mRNA-1 |
| chr1_2 | five_prime_UTR | 7423807 | 7423938 | 7423807 | ID=Msa0053010-mRNA-1:five_prime_utr;Parent=Msa0053010-mRNA-1 |
| chr1_2 | five_prime_UTR | 7422674 | 7422686 | 7422674 | ID=Msa0053010-mRNA-1:five_prime_utr;Parent=Msa0053010-mRNA-1 |
| chr1_2 | CDS | 7422249 | 7422673 | 7422249 | ID=Msa0053010-mRNA-1:cds;Parent=Msa0053010-mRNA-1 |
| chr1_2 | CDS | 7418752 | 7419103 | 7418752 | ID=Msa0053010-mRNA-1:cds;Parent=Msa0053010-mRNA-1 |
| chr1_2 | CDS | 7416245 | 7416322 | 7416245 | ID=Msa0053010-mRNA-1:cds;Parent=Msa0053010-mRNA-1 |
| chr1_2 | CDS | 7415915 | 7415965 | 7415915 | ID=Msa0053010-mRNA-1:cds;Parent=Msa0053010-mRNA-1 |
| chr1_2 | three_prime_UTR | 7415553 | 7415914 | 7415553 | ID=Msa0053010-mRNA-1:three_prime_utr;Parent=Msa0053010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
