AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0901870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901870 MtrunA17_Chr6g0482941 95.720 514 22 0 1 514 1 514 0.0 1026
Msa0901870 MtrunA17_Chr6g0482951 92.607 514 38 0 1 514 1 514 0.0 999
Msa0901870 MtrunA17_Chr4g0043091 51.098 501 238 6 20 514 6 505 5.66e-180 515
Msa0901870 MtrunA17_Chr6g0482081 51.984 504 232 7 20 513 11 514 3.38e-178 511
Msa0901870 MtrunA17_Chr6g0482131 51.674 478 224 5 43 513 36 513 3.09e-176 506
Msa0901870 MtrunA17_Chr6g0482071 48.733 513 252 6 13 514 3 515 1.89e-173 499
Msa0901870 MtrunA17_Chr4g0033201 49.312 509 250 6 12 512 4 512 1.93e-173 498
Msa0901870 MtrunA17_Chr4g0033271 49.703 505 246 6 15 512 8 511 2.30e-173 498
Msa0901870 MtrunA17_Chr2g0329191 50.520 481 232 5 38 512 29 509 3.38e-172 495
Msa0901870 MtrunA17_Chr3g0087261 49.603 504 249 4 15 514 9 511 2.92e-171 493
Msa0901870 MtrunA17_Chr4g0042171 51.579 475 223 5 43 510 24 498 8.25e-171 492
Msa0901870 MtrunA17_Chr4g0033311 48.627 510 251 6 15 513 7 516 3.35e-169 488
Msa0901870 MtrunA17_Chr2g0329201 48.126 507 254 6 15 512 1 507 4.40e-169 487
Msa0901870 MtrunA17_Chr4g0033331 50.305 491 235 6 29 511 25 514 5.93e-169 488
Msa0901870 MtrunA17_Chr4g0033401 48.622 508 251 7 13 511 3 509 5.65e-167 482
Msa0901870 MtrunA17_Chr3g0087271 49.315 511 245 7 13 514 7 512 1.59e-166 481
Msa0901870 MtrunA17_Chr3g0090131 50.636 472 219 5 43 510 21 482 4.44e-166 479
Msa0901870 MtrunA17_Chr3g0090111 50.636 472 218 6 43 510 19 479 3.54e-165 477
Msa0901870 MtrunA17_Chr4g0033321 48.039 510 254 8 13 513 3 510 6.07e-165 477
Msa0901870 MtrunA17_Chr3g0088441 47.173 513 260 6 12 513 3 515 2.09e-163 474
Msa0901870 MtrunA17_Chr4g0033191 48.381 494 245 7 28 512 27 519 1.31e-162 471
Msa0901870 MtrunA17_Chr4g0033341 48.444 514 247 11 11 512 36 543 2.54e-161 469
Msa0901870 MtrunA17_Chr4g0074561 47.789 475 240 5 48 514 40 514 2.38e-159 463
Msa0901870 MtrunA17_Chr2g0329321 46.215 502 239 6 18 512 11 488 2.93e-158 459
Msa0901870 MtrunA17_Chr4g0033261 45.543 516 243 8 9 513 6 494 3.01e-157 456
Msa0901870 MtrunA17_Chr4g0010501 48.734 474 236 5 43 512 24 494 3.28e-157 456
Msa0901870 MtrunA17_Chr2g0317841 46.091 486 248 4 34 510 23 503 1.55e-156 456
Msa0901870 MtrunA17_Chr2g0288071 46.887 514 251 9 12 514 42 544 6.35e-156 455
Msa0901870 MtrunA17_Chr2g0317821 46.296 486 247 4 34 510 23 503 9.18e-156 454
Msa0901870 MtrunA17_Chr4g0074551 47.780 473 240 5 48 514 55 526 3.92e-155 454
Msa0901870 MtrunA17_Chr2g0288021 46.234 478 250 4 43 514 35 511 1.13e-151 443
Msa0901870 MtrunA17_Chr5g0430451 45.349 516 241 7 14 512 7 498 1.56e-148 434
Msa0901870 MtrunA17_Chr4g0033231 43.713 501 248 7 20 512 19 493 3.99e-147 431
Msa0901870 MtrunA17_Chr4g0006111 43.811 509 243 10 23 514 45 527 7.58e-139 411
Msa0901870 MtrunA17_Chr4g0006971 43.154 482 249 6 42 513 26 492 1.20e-136 405
Msa0901870 MtrunA17_Chr7g0242681 45.303 479 242 8 42 513 37 502 1.33e-135 402
Msa0901870 MtrunA17_Chr1g0195611 43.418 509 260 9 7 510 2 487 3.01e-135 401
Msa0901870 MtrunA17_Chr5g0428831 43.080 513 257 11 7 510 2 488 4.83e-133 395
Msa0901870 MtrunA17_Chr7g0242691 42.650 483 250 7 42 513 30 496 7.07e-131 390
Msa0901870 MtrunA17_Chr4g0006131 41.935 496 246 10 35 514 34 503 9.58e-127 379
Msa0901870 MtrunA17_Chr5g0418871 57.966 295 123 1 64 357 4 298 1.50e-122 362
Msa0901870 MtrunA17_Chr1g0195641 45.038 393 197 5 40 425 24 404 5.89e-110 333
Msa0901870 MtrunA17_Chr7g0234091 39.958 473 265 8 44 512 76 533 1.59e-108 333
Msa0901870 MtrunA17_Chr7g0234131 39.030 474 267 9 44 511 76 533 3.14e-104 322
Msa0901870 MtrunA17_Chr7g0234111 39.746 473 264 9 44 511 76 532 6.68e-104 321
Msa0901870 MtrunA17_Chr2g0301231 42.005 419 200 10 110 512 1 392 6.16e-101 309
Msa0901870 MtrunA17_Chr3g0087201 49.091 330 161 5 184 510 17 342 1.63e-100 306
Msa0901870 MtrunA17_Chr7g0230651 41.484 364 198 7 97 458 26 376 5.21e-89 278
Msa0901870 MtrunA17_Chr7g0227561 38.806 268 127 6 45 308 48 282 3.05e-57 192
Msa0901870 MtrunA17_Chr7g0236731 42.918 233 126 4 133 363 32 259 1.08e-52 180
Msa0901870 MtrunA17_Chr3g0087191 53.741 147 65 2 40 183 19 165 3.94e-47 161
Msa0901870 MtrunA17_Chr5g0418861 46.154 91 45 3 425 511 1 91 2.29e-20 85.9
Msa0901870 MtrunA17_Chr8g0352881 45.652 92 50 0 264 355 56 147 3.56e-20 87.4
Msa0901870 MtrunA17_Chr4g0068871 23.765 425 249 13 102 514 175 536 3.06e-18 88.2
Msa0901870 MtrunA17_Chr2g0288031 54.237 59 27 0 193 251 5 63 1.16e-17 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901870 AT3G18080.1 78.958 480 100 1 34 512 30 509 0.0 796
Msa0901870 AT3G18070.3 73.029 482 121 2 34 514 21 494 0.0 747
Msa0901870 AT3G18070.1 71.805 493 134 3 25 514 10 500 0.0 744
Msa0901870 AT3G18070.4 73.043 345 90 2 34 377 21 363 0.0 532
Msa0901870 AT3G18070.2 73.333 330 87 1 186 514 94 423 0.0 519
Msa0901870 AT3G18070.2 66.197 71 24 0 34 104 21 91 1.88e-24 106
Msa0901870 AT3G18070.7 74.598 311 78 1 205 514 1 311 7.76e-176 497
Msa0901870 AT5G54570.1 52.905 482 219 6 37 510 24 505 4.46e-173 499
Msa0901870 AT1G26560.1 50.737 475 227 5 43 510 32 506 1.85e-168 486
Msa0901870 AT5G44640.1 48.819 508 247 8 13 514 5 505 2.61e-163 473
Msa0901870 AT2G44450.1 51.559 481 223 7 40 514 28 504 4.81e-162 469
Msa0901870 AT5G42260.1 48.708 503 245 9 10 506 2 497 1.71e-158 461
Msa0901870 AT2G44480.1 47.835 485 246 5 33 511 26 509 5.28e-158 460
Msa0901870 AT2G44480.3 47.835 485 246 5 33 511 57 540 2.23e-157 459
Msa0901870 AT1G61820.1 48.945 474 231 7 48 512 35 506 2.95e-154 450
Msa0901870 AT5G36890.2 46.914 486 237 6 30 510 10 479 1.16e-153 447
Msa0901870 AT5G36890.1 46.914 486 237 6 30 510 10 479 1.50e-153 447
Msa0901870 AT5G54570.3 52.225 427 198 4 37 457 24 450 9.56e-152 441
Msa0901870 AT3G60130.1 48.319 476 233 8 43 510 30 500 2.18e-151 443
Msa0901870 AT1G02850.2 47.780 473 227 7 44 510 27 485 4.95e-150 439
Msa0901870 AT4G21760.2 44.828 493 254 5 26 514 47 525 8.33e-150 440
Msa0901870 AT4G21760.1 44.422 493 246 6 26 514 47 515 7.86e-147 432
Msa0901870 AT2G25630.1 46.337 505 243 9 16 514 5 487 9.58e-147 430
Msa0901870 AT1G02850.5 45.766 496 226 8 44 510 27 508 2.00e-145 428
Msa0901870 AT5G54570.2 53.431 408 183 5 110 510 1 408 1.69e-144 422
Msa0901870 AT1G02850.4 45.674 497 226 9 44 510 27 509 4.00e-144 424
Msa0901870 AT1G61810.1 46.300 473 245 6 48 512 38 509 4.41e-144 424
Msa0901870 AT5G24550.1 45.902 488 254 8 35 512 24 511 4.88e-144 425
Msa0901870 AT3G60140.1 43.960 505 267 8 17 512 7 504 5.23e-141 418
Msa0901870 AT1G02850.1 45.666 473 210 8 44 510 27 458 5.21e-140 412
Msa0901870 AT4G27830.1 43.452 504 258 9 12 510 3 484 2.20e-139 412
Msa0901870 AT1G61810.3 46.405 459 237 6 48 498 38 495 5.38e-139 412
Msa0901870 AT1G51470.1 45.380 487 248 11 34 512 35 511 1.84e-136 404
Msa0901870 AT5G24540.1 45.328 503 265 8 20 512 9 511 2.12e-136 405
Msa0901870 AT2G44470.3 43.307 508 271 10 17 512 5 507 4.99e-136 406
Msa0901870 AT1G47600.1 44.969 487 250 10 34 512 35 511 9.86e-136 402
Msa0901870 AT1G47600.2 44.764 487 250 11 34 512 35 510 4.31e-135 401
Msa0901870 AT2G44460.1 45.472 508 265 9 15 513 3 507 4.50e-135 403
Msa0901870 AT4G27820.1 45.359 474 241 8 42 510 22 482 4.53e-134 398
Msa0901870 AT2G44480.2 48.403 407 205 3 110 511 1 407 5.61e-134 395
Msa0901870 AT1G60090.2 42.495 473 253 6 43 510 24 482 2.61e-131 391
Msa0901870 AT1G75940.1 44.628 484 249 11 43 510 37 517 3.98e-131 392
Msa0901870 AT2G44490.1 43.096 478 259 9 45 510 16 492 5.64e-131 392
Msa0901870 AT3G21370.1 44.536 485 252 12 40 510 30 511 7.62e-131 390
Msa0901870 AT1G60090.1 41.632 478 257 6 43 510 24 489 1.09e-129 387
Msa0901870 AT4G22100.1 41.949 472 255 7 45 510 24 482 4.18e-129 385
Msa0901870 AT5G28510.1 41.797 512 279 10 17 512 13 521 5.77e-129 386
Msa0901870 AT3G60120.1 43.347 496 263 10 30 512 1 491 7.40e-129 386
Msa0901870 AT3G18070.5 73.029 241 64 1 186 425 94 334 7.62e-129 379
Msa0901870 AT3G18070.5 66.197 71 24 0 34 104 21 91 7.28e-25 105
Msa0901870 AT3G60130.2 47.585 414 205 7 104 510 40 448 6.61e-128 381
Msa0901870 AT1G66280.1 41.980 505 278 9 16 510 11 510 1.67e-127 382
Msa0901870 AT3G09260.1 41.551 503 277 10 20 512 17 512 3.10e-127 381
Msa0901870 AT3G62750.1 41.598 488 260 8 26 510 8 473 2.04e-126 378
Msa0901870 AT1G45191.4 41.350 474 257 7 44 513 30 486 5.22e-126 377
Msa0901870 AT3G62750.2 41.598 488 260 8 26 510 34 499 5.50e-126 378
Msa0901870 AT2G32860.1 42.946 482 264 9 43 514 94 574 1.07e-125 380
Msa0901870 AT5G26000.1 43.867 481 240 10 48 510 43 511 6.05e-125 376
Msa0901870 AT3G03640.1 41.292 511 277 12 18 512 11 514 7.99e-125 375
Msa0901870 AT1G45191.6 40.717 474 271 4 44 513 30 497 4.05e-124 373
Msa0901870 AT2G32860.2 42.767 477 263 8 48 514 99 575 7.59e-124 375
Msa0901870 AT1G45191.2 40.506 474 267 5 44 513 30 492 9.90e-124 372
Msa0901870 AT1G61810.5 46.341 410 212 5 110 512 1 409 1.82e-123 368
Msa0901870 AT1G66270.1 41.988 493 273 8 30 512 23 512 2.02e-123 372
Msa0901870 AT1G45191.1 40.249 482 274 4 44 513 30 509 9.49e-123 370
Msa0901870 AT1G52400.3 43.568 482 253 12 43 510 39 515 1.03e-122 370
Msa0901870 AT1G52400.1 43.568 482 253 12 43 510 39 515 1.03e-122 370
Msa0901870 AT3G60130.3 46.377 414 199 8 104 510 40 437 3.05e-122 366
Msa0901870 AT3G18070.6 74.775 222 55 1 205 425 1 222 8.76e-122 357
Msa0901870 AT1G02850.3 46.569 408 181 6 44 424 27 424 2.94e-121 363
Msa0901870 AT1G66270.2 41.582 493 273 9 30 512 23 510 7.44e-120 362
Msa0901870 AT5G25980.2 39.887 529 284 15 8 510 2 522 7.14e-119 360
Msa0901870 AT5G24540.2 43.946 446 242 6 20 457 9 454 6.16e-115 347
Msa0901870 AT2G44450.2 50.980 357 168 5 161 514 1 353 1.72e-114 343
Msa0901870 AT3G62740.1 38.525 488 272 7 30 510 12 478 2.18e-114 348
Msa0901870 AT1G61820.3 48.634 366 179 5 154 512 4 367 1.07e-113 342
Msa0901870 AT2G44470.1 41.463 451 249 8 17 457 5 450 1.33e-113 344
Msa0901870 AT4G27830.2 44.581 406 210 7 110 510 1 396 2.03e-113 342
Msa0901870 AT1G61810.4 45.170 383 203 5 48 424 38 419 5.36e-112 339
Msa0901870 AT3G60140.2 42.373 413 226 5 17 424 7 412 3.81e-111 338
Msa0901870 AT5G26000.2 43.765 425 212 8 48 457 43 455 4.15e-110 335
Msa0901870 AT2G44480.4 52.090 311 145 3 33 340 57 366 5.49e-109 330
Msa0901870 AT4G27820.2 44.828 406 210 7 110 510 1 397 6.02e-109 331
Msa0901870 AT4G27820.3 44.828 406 210 7 110 510 1 397 6.02e-109 331
Msa0901870 AT3G62750.4 41.055 436 234 7 26 460 34 447 1.83e-108 331
Msa0901870 AT1G60270.1 46.154 364 180 5 43 402 24 375 4.84e-108 327
Msa0901870 AT5G25980.3 39.112 473 257 13 8 457 2 466 1.77e-104 321
Msa0901870 AT5G25980.1 39.112 473 257 13 8 457 2 466 1.77e-104 321
Msa0901870 AT1G52400.2 42.857 427 227 10 43 457 39 460 1.02e-103 319
Msa0901870 AT3G62750.6 41.584 404 217 6 110 510 1 388 5.25e-103 315
Msa0901870 AT3G62750.5 41.584 404 217 6 110 510 1 388 5.25e-103 315
Msa0901870 AT1G45191.5 45.015 331 176 2 44 372 30 356 3.16e-101 311
Msa0901870 AT1G45191.3 45.015 331 176 2 44 372 30 356 3.85e-101 310
Msa0901870 AT3G62740.2 38.799 433 239 6 30 457 12 423 4.01e-101 311
Msa0901870 AT2G44470.2 43.370 362 195 5 17 372 5 362 1.60e-99 306
Msa0901870 AT3G62750.7 44.848 330 168 3 26 355 8 323 3.24e-96 296
Msa0901870 AT3G62750.8 44.848 330 168 3 26 355 8 323 3.24e-96 296
Msa0901870 AT3G62750.3 41.775 383 205 6 26 408 34 398 3.91e-96 298
Msa0901870 AT2G44460.2 46.111 360 186 7 161 513 3 361 3.14e-93 291
Msa0901870 AT2G44480.5 46.865 303 158 2 212 511 1 303 6.72e-90 278
Msa0901870 AT5G48375.1 38.443 411 197 6 70 476 53 411 8.93e-86 271
Msa0901870 AT1G61810.2 48.289 263 134 2 48 308 38 300 1.06e-84 265
Msa0901870 AT1G60270.2 45.118 297 150 4 110 402 1 288 1.78e-82 258
Msa0901870 AT1G51490.1 39.660 353 182 12 50 390 27 360 5.36e-72 235
Msa0901870 AT5G16580.1 38.538 301 158 8 178 466 12 297 1.30e-51 178

Find 110 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAATAATGTTTGTGGTTT+TGG 0.166444 6_1:+98871662 Msa0901870:three_prime_UTR
TTCATTCATCCCCTTGTTTA+TGG 0.184377 6_1:+98865317 Msa0901870:CDS
TTCTTGTTAGTTCAGTTAAT+GGG 0.228286 6_1:+98862242 Msa0901870:CDS
CCTATGTACTTATCTGAAAA+TGG 0.261140 6_1:+98871164 Msa0901870:CDS
GTATCCAAATGCACTGTTTC+AGG 0.271354 6_1:-98862274 None:intergenic
AGGGTCGTGGCCCTAGTATT+TGG 0.275337 6_1:+98862386 Msa0901870:CDS
AACCAATATGCAGACATCTT+AGG 0.282698 6_1:-98871537 None:intergenic
GATTGATAGCCAGGGACTTT+TGG 0.308408 6_1:-98865488 None:intergenic
GTTCTTGTTAGTTCAGTTAA+TGG 0.310784 6_1:+98862241 Msa0901870:CDS
GGAAGATGTTCAAAAGAATA+TGG 0.312152 6_1:+98864522 Msa0901870:CDS
AATTGTACAGCTGGAAATTC+AGG 0.314656 6_1:+98864546 Msa0901870:CDS
AGAGCTAGAGACTTTAATAT+TGG 0.315634 6_1:+98864974 Msa0901870:CDS
GATAACTTTGAATGGAGATT+AGG 0.315709 6_1:+98871459 Msa0901870:CDS
ATAACTTTGAATGGAGATTA+GGG 0.318193 6_1:+98871460 Msa0901870:CDS
ATGGAACTGGCAAAGTAAAT+TGG 0.320592 6_1:+98863995 Msa0901870:CDS
ACCAATATGCAGACATCTTA+GGG 0.340920 6_1:-98871536 None:intergenic
CTTCCTCCTTAGTAAACTTT+GGG 0.341453 6_1:-98865382 None:intergenic
CCAGGAGTTGTTGCTTCTCT+TGG 0.344404 6_1:+98864474 Msa0901870:CDS
AAATTGTGAGCTACAGTATA+AGG 0.347951 6_1:-98864576 None:intergenic
ACTTCCTCCTTAGTAAACTT+TGG 0.350680 6_1:-98865383 None:intergenic
GAAACAGTGCATTTGGATAC+TGG 0.355962 6_1:+98862277 Msa0901870:CDS
ACAGGGATTGTCGCAAATAA+TGG 0.357337 6_1:+98863574 Msa0901870:intron
TTTCCTAAAGGGTTTGTGTT+TGG 0.360877 6_1:+98862319 Msa0901870:CDS
GATTGGAATGTAGGGTTTGC+TGG 0.362322 6_1:+98865512 Msa0901870:CDS
ACTCCAAACACAAACCCTTT+AGG 0.380059 6_1:-98862322 None:intergenic
AGTGCCTGAAACAGTGCATT+TGG 0.386606 6_1:+98862270 Msa0901870:CDS
GGGTCGTGGCCCTAGTATTT+GGG 0.395338 6_1:+98862387 Msa0901870:CDS
CCCCTAAGATGTCTGCATAT+TGG 0.396318 6_1:+98871535 Msa0901870:CDS
CATTGCTTGATAACTTTGAA+TGG 0.399596 6_1:+98871451 Msa0901870:CDS
GATCGATTACTTACTAGAAA+AGG 0.402755 6_1:+98864044 Msa0901870:CDS
ATGAAAACATCCCAAATACT+AGG 0.410209 6_1:-98862397 None:intergenic
TTCCAATCTGATTGATAGCC+AGG 0.411420 6_1:-98865497 None:intergenic
TCAGCCTTTGATCTTGTAAG+AGG 0.416498 6_1:-98864935 None:intergenic
GATGATGGAGCAAATGTGTT+TGG 0.416603 6_1:+98871414 Msa0901870:CDS
AAACTTACTCTTGGTCCAAC+AGG 0.417709 6_1:-98865879 None:intergenic
TATCAATCAGATTGGAATGT+AGG 0.430284 6_1:+98865503 Msa0901870:CDS
GAAAAGCAAAAGGGTAGGAT+TGG 0.432684 6_1:+98864884 Msa0901870:CDS
ATGGAGACAGAGTGAAGAAC+TGG 0.441462 6_1:+98864436 Msa0901870:CDS
ACTATTGATGCAGATGGAAC+TGG 0.443243 6_1:+98863982 Msa0901870:intron
AGAACTATGCAAAATATTGT+TGG 0.445283 6_1:+98865350 Msa0901870:CDS
ATCGATTACTTACTAGAAAA+GGG 0.447145 6_1:+98864045 Msa0901870:CDS
GAATATGGAAATTGTACAGC+TGG 0.451912 6_1:+98864537 Msa0901870:CDS
GAGCTAAAGGAAGGTCATAA+TGG 0.457252 6_1:-98864197 None:intergenic
CTAAAGAAAGCTATAGATGA+TGG 0.459612 6_1:+98871399 Msa0901870:CDS
ATTGATACCAACAGAATCAA+TGG 0.461863 6_1:-98865423 None:intergenic
GAACTATGCAAAATATTGTT+GGG 0.468791 6_1:+98865351 Msa0901870:CDS
GTTTCTTATGTTTCTAATTG+TGG 0.472158 6_1:+98871637 Msa0901870:three_prime_UTR
TATTTCAACTCAAGAGCTAA+AGG 0.473991 6_1:-98864210 None:intergenic
TTAGGGTACACATCAAGGTT+TGG 0.474691 6_1:+98871477 Msa0901870:CDS
GCTTCTCTTGGCTATGACAA+TGG 0.483635 6_1:+98864486 Msa0901870:CDS
AACAACTCCTGGTTCATTGA+AGG 0.484792 6_1:-98864463 None:intergenic
GGAGATTAGGGTACACATCA+AGG 0.485807 6_1:+98871472 Msa0901870:CDS
TGCTTATCAAGTAGAGGGTA+TGG 0.494673 6_1:+98862354 Msa0901870:CDS
CCAAGAGAAGCAACAACTCC+TGG 0.501942 6_1:-98864474 None:intergenic
ATCAATCAGATTGGAATGTA+GGG 0.502358 6_1:+98865504 Msa0901870:CDS
CTGTGTTAGTGCTTCAATCA+CGG 0.502560 6_1:-98871793 None:intergenic
TCCCTGGCTATCAATCAGAT+TGG 0.504287 6_1:+98865495 Msa0901870:CDS
AATATGGAAGATGCTAAGAA+TGG 0.510867 6_1:+98865852 Msa0901870:intron
TTTGAAAATGTTACATTACC+AGG 0.518199 6_1:-98871324 None:intergenic
TATTTGTGTGTAAGTGTTGT+GGG 0.523845 6_1:-98862117 None:intergenic
CTAGAGACTTTAATATTGGA+TGG 0.527607 6_1:+98864978 Msa0901870:CDS
TGTGTTAGTGCTTCAATCAC+GGG 0.530281 6_1:-98871792 None:intergenic
TTGGCTATACAATGTACCAT+GGG 0.531425 6_1:+98871094 Msa0901870:CDS
CAGACTCCCAAAGTTTACTA+AGG 0.535825 6_1:+98865376 Msa0901870:CDS
ACAGGAAGATATAGATCTCA+TGG 0.540465 6_1:+98863828 Msa0901870:intron
TTGTCTGAACATGGTGATGT+TGG 0.542401 6_1:+98862168 Msa0901870:exon
AACTTCTGCTTATCAAGTAG+AGG 0.544999 6_1:+98862348 Msa0901870:CDS
GAGGGTATGGCTAGCAAAGA+GGG 0.549403 6_1:+98862367 Msa0901870:CDS
GCTCTTGAGTTGAAATACAA+TGG 0.550179 6_1:+98864216 Msa0901870:CDS
CAAATCAGTAATGTACATCA+AGG 0.552581 6_1:+98871124 Msa0901870:CDS
TTTAGGAAAAGCAAAAGGGT+AGG 0.554677 6_1:+98864879 Msa0901870:intron
AAGGGCTCCATTGATTCTGT+TGG 0.561150 6_1:+98865416 Msa0901870:CDS
TAAGTACTTACACAACGTTA+CGG 0.561802 6_1:-98864248 None:intergenic
TCTTGTTAGTTCAGTTAATG+GGG 0.568038 6_1:+98862243 Msa0901870:CDS
GTGGTAGTGAATAATGTTTG+TGG 0.579531 6_1:+98871656 Msa0901870:three_prime_UTR
TGAAAACATCCCAAATACTA+GGG 0.582780 6_1:-98862396 None:intergenic
TAATGGTAGAGATTTGCATA+AGG 0.585059 6_1:-98864180 None:intergenic
ACAAGAATAAACTATTACAA+AGG 0.585424 6_1:+98871363 Msa0901870:CDS
TGGACCATGAGATTGAGAAC+CGG 0.587343 6_1:-98863873 None:intergenic
TATCAAGCAATGACCAAGCA+TGG 0.588296 6_1:-98871440 None:intergenic
ATTGTCGCAAATAATGGCAC+AGG 0.588601 6_1:+98863580 Msa0901870:CDS
CAAGCAAAACCAAAAGTCCC+TGG 0.590365 6_1:+98865479 Msa0901870:CDS
CTATTTGTGTGTAAGTGTTG+TGG 0.591531 6_1:-98862118 None:intergenic
TTTCAGATAAGTACATAGGT+GGG 0.594742 6_1:-98871160 None:intergenic
GCTAAGAATGGAGTGCCTGT+TGG 0.595462 6_1:+98865864 Msa0901870:CDS
ACTTCTGCTTATCAAGTAGA+GGG 0.604107 6_1:+98862349 Msa0901870:CDS
TGGATGACCTTCAATGAACC+AGG 0.604287 6_1:+98864456 Msa0901870:CDS
CTTGGCTATACAATGTACCA+TGG 0.606444 6_1:+98871093 Msa0901870:CDS
TGAGCCTCTTACAAGATCAA+AGG 0.608751 6_1:+98864931 Msa0901870:CDS
AGAGGGTATGGCTAGCAAAG+AGG 0.611917 6_1:+98862366 Msa0901870:CDS
TATGTAGGCATGGATGATCC+TGG 0.616048 6_1:+98871306 Msa0901870:intron
ATGGCTAGCAAAGAGGGTCG+TGG 0.616104 6_1:+98862373 Msa0901870:CDS
TCAACTCAAGAGCTAAAGGA+AGG 0.616683 6_1:-98864206 None:intergenic
GGAGGAAGTGAAACTTGTGA+AGG 0.616710 6_1:+98865397 Msa0901870:CDS
GAGGAAGTGAAACTTGTGAA+GGG 0.620886 6_1:+98865398 Msa0901870:CDS
TCCAATCTGATTGATAGCCA+GGG 0.620998 6_1:-98865496 None:intergenic
ACTGATTTGTATAAGCCCCA+TGG 0.625136 6_1:-98871110 None:intergenic
TTGGATACTCACCATAAACA+AGG 0.626001 6_1:-98865328 None:intergenic
AATACCGGTTCTCAATCTCA+TGG 0.626644 6_1:+98863869 Msa0901870:CDS
CAGTGCATTTGGATACTGGA+GGG 0.628351 6_1:+98862281 Msa0901870:CDS
ATGTGTTTGGATACCATGCT+TGG 0.628865 6_1:+98871427 Msa0901870:CDS
ACTCCCAAAGTTTACTAAGG+AGG 0.632864 6_1:+98865379 Msa0901870:CDS
ACTGGCAAAGTAAATTGGAA+AGG 0.635766 6_1:+98864000 Msa0901870:CDS
CTAGTGTTATTGTCTGAACA+TGG 0.638438 6_1:+98862159 Msa0901870:exon
TGGATACTCACCATAAACAA+GGG 0.638550 6_1:-98865327 None:intergenic
GGATACTCACCATAAACAAG+GGG 0.663952 6_1:-98865326 None:intergenic
ACAGTGCATTTGGATACTGG+AGG 0.685224 6_1:+98862280 Msa0901870:CDS
CCAATATGCAGACATCTTAG+GGG 0.704502 6_1:-98871535 None:intergenic
AAGATATAGAGAGAAATACC+AGG 0.711380 6_1:+98864626 Msa0901870:CDS
TGGCTATACAATGTACCATG+GGG 0.741096 6_1:+98871095 Msa0901870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTAAATTTTTTAAAAA+TGG - chr6_1:98865558-98865577 None:intergenic 0.0%
!!! AAAAACATATGTTTTTTATT+TGG - chr6_1:98862601-98862620 None:intergenic 10.0%
!!! TAAAAAACATATGTTTTTAT+TGG + chr6_1:98862603-98862622 Msa0901870:intron 10.0%
!! ACATTATATAATATGTTATT+TGG - chr6_1:98863744-98863763 None:intergenic 10.0%
!!! AGTTTAAAATTGATTATTAA+TGG - chr6_1:98863965-98863984 None:intergenic 10.0%
!! AAGAATAATTAATTGAGATT+AGG - chr6_1:98862448-98862467 None:intergenic 15.0%
!!! AATACAAGTTTTTTTTTTGA+AGG - chr6_1:98862496-98862515 None:intergenic 15.0%
!! TTGATAAAATTATACTAGTT+AGG + chr6_1:98862644-98862663 Msa0901870:intron 15.0%
!! AATGAAGATTAATAATTGTT+AGG + chr6_1:98862829-98862848 Msa0901870:intron 15.0%
!! AATATACCCAAAAATAAATT+TGG - chr6_1:98863067-98863086 None:intergenic 15.0%
!! TAATTAATAACCATTCTTAT+AGG - chr6_1:98863351-98863370 None:intergenic 15.0%
!! ATAGAAATATTTGAATTACT+TGG - chr6_1:98863907-98863926 None:intergenic 15.0%
!!! CTAAATACTAACATAATTTT+TGG + chr6_1:98864090-98864109 Msa0901870:intron 15.0%
!!! AAATGTGATTTTATTTTATC+TGG + chr6_1:98864327-98864346 Msa0901870:intron 15.0%
!!! AATGATCAATGTTTTAAAAT+TGG + chr6_1:98864368-98864387 Msa0901870:intron 15.0%
!!! TTAGTATTTTGATTCTTTTT+AGG + chr6_1:98864654-98864673 Msa0901870:intron 15.0%
!! TAAGTATATGTTTAGATTAT+CGG + chr6_1:98864678-98864697 Msa0901870:intron 15.0%
!! TTTCAAATTATTAATAGTGT+CGG + chr6_1:98865195-98865214 Msa0901870:intron 15.0%
!! AATTTCTTAGTGTATATTTA+TGG + chr6_1:98865277-98865296 Msa0901870:intron 15.0%
!!! AATTTTTTAAAAATGGTTGA+AGG - chr6_1:98865551-98865570 None:intergenic 15.0%
!!! CTTTTAAGATTAAAAATCTA+GGG - chr6_1:98867085-98867104 None:intergenic 15.0%
!!! ACTTTTAAGATTAAAAATCT+AGG - chr6_1:98867086-98867105 None:intergenic 15.0%
!! GTAAATATTTAATGATATGT+AGG + chr6_1:98871291-98871310 Msa0901870:intron 15.0%
!! ATAAAATAATCTGGTTGAAA+CGG + chr6_1:98862773-98862792 Msa0901870:intron 20.0%
!!! AGTAATCTCTTTTAGAAAAT+TGG + chr6_1:98862891-98862910 Msa0901870:intron 20.0%
!! ATTCTCAATTATCTAATCAT+TGG - chr6_1:98863033-98863052 None:intergenic 20.0%
!! CTTCCTCAAAAAATTTAATA+TGG + chr6_1:98863156-98863175 Msa0901870:intron 20.0%
!!! CAACCATATTAAATTTTTTG+AGG - chr6_1:98863162-98863181 None:intergenic 20.0%
!! TTAATATGGTTGTATAACTT+AGG + chr6_1:98863170-98863189 Msa0901870:intron 20.0%
!! ATTAACACAAATCACATAAT+TGG + chr6_1:98863424-98863443 Msa0901870:intron 20.0%
!! TTATTGTTTCAATTCATAAC+AGG + chr6_1:98863556-98863575 Msa0901870:intron 20.0%
!! TATTGTTTCAATTCATAACA+GGG + chr6_1:98863557-98863576 Msa0901870:intron 20.0%
!! TTATGTTAGTATTTAGACTA+TGG - chr6_1:98864086-98864105 None:intergenic 20.0%
!!! AATGCTGATAGAAAATTTTA+CGG + chr6_1:98864297-98864316 Msa0901870:intron 20.0%
!! ATCAAAATACTAATATTACC+TGG - chr6_1:98864647-98864666 None:intergenic 20.0%
!!! TTTTTTTAGGAAAAGCAAAA+GGG + chr6_1:98864875-98864894 Msa0901870:intron 20.0%
!! TTTCTAATTGAAGAAATTGT+TGG + chr6_1:98865018-98865037 Msa0901870:intron 20.0%
!!! ACATATTTTATAGCCTAAAT+TGG - chr6_1:98865617-98865636 None:intergenic 20.0%
!!! ATTGATTTTCTTGCTAAATA+TGG + chr6_1:98865836-98865855 Msa0901870:intron 20.0%
!!! TTATTTTGACTGATAGAATA+AGG + chr6_1:98868802-98868821 Msa0901870:intron 20.0%
!!! AACAGAAATACTTGAAATTT+TGG + chr6_1:98868993-98869012 Msa0901870:intron 20.0%
!!! TTTGGTAAAGTTACTTTAAT+AGG + chr6_1:98869276-98869295 Msa0901870:intron 20.0%
!!! TTGGTAAAGTTACTTTAATA+GGG + chr6_1:98869277-98869296 Msa0901870:intron 20.0%
!!! AACAAATTCAAATTTGTTGA+TGG - chr6_1:98870350-98870369 None:intergenic 20.0%
!! CAATAACAATAACAATAATC+AGG - chr6_1:98870501-98870520 None:intergenic 20.0%
!!! ATTTATATGTGATACTTTTC+AGG + chr6_1:98871061-98871080 Msa0901870:intron 20.0%
!!! AAAATGAAGCATTCAAATAA+AGG - chr6_1:98871212-98871231 None:intergenic 20.0%
!! ACAAGAATAAACTATTACAA+AGG + chr6_1:98871363-98871382 Msa0901870:CDS 20.0%
!! AGCTAAAAAAAATGTTTCTT+AGG + chr6_1:98871595-98871614 Msa0901870:intron 20.0%
! TTCTTGTTAGTTCAGTTAAT+GGG + chr6_1:98862242-98862261 Msa0901870:CDS 25.0%
!!! CATATGTTTTTATTGGAAGT+AGG + chr6_1:98862610-98862629 Msa0901870:intron 25.0%
! CTTATGCGTATAAAATAATC+TGG + chr6_1:98862764-98862783 Msa0901870:intron 25.0%
! TAAAATAATCTGGTTGAAAC+GGG + chr6_1:98862774-98862793 Msa0901870:intron 25.0%
!!! AAATTGGTAAGCTTTTGATT+TGG + chr6_1:98862907-98862926 Msa0901870:intron 25.0%
!!! GATAATTGAGAATTTTTTCC+CGG + chr6_1:98863040-98863059 Msa0901870:intron 25.0%
!! AGTAATATTTGTTTGCTAAG+AGG + chr6_1:98863325-98863344 Msa0901870:intron 25.0%
! TACATATAGTACAGAGAAAA+GGG - chr6_1:98863464-98863483 None:intergenic 25.0%
! TTACATATAGTACAGAGAAA+AGG - chr6_1:98863465-98863484 None:intergenic 25.0%
!! CTAATGTGTTTAAGCTTTAA+AGG - chr6_1:98863647-98863666 None:intergenic 25.0%
! TAAATGTAAGGTTCATACTA+AGG - chr6_1:98863716-98863735 None:intergenic 25.0%
! TATTTGGCAAGTTAAATGTA+AGG - chr6_1:98863728-98863747 None:intergenic 25.0%
! TGATCATATATATTTGTGTG+TGG + chr6_1:98863769-98863788 Msa0901870:intron 25.0%
!!! AGCTAAATTTTGATCAATAC+CGG + chr6_1:98863854-98863873 Msa0901870:CDS 25.0%
! TGAATTACTTGGAAAAATTC+TGG - chr6_1:98863896-98863915 None:intergenic 25.0%
!! TTTTAAACTATTGATGCAGA+TGG + chr6_1:98863976-98863995 Msa0901870:intron 25.0%
! ATCGATTACTTACTAGAAAA+GGG + chr6_1:98864045-98864064 Msa0901870:CDS 25.0%
!!! ATCAGCATTTTTTCTTTTCA+TGG - chr6_1:98864286-98864305 None:intergenic 25.0%
!! ATGCTGATAGAAAATTTTAC+GGG + chr6_1:98864298-98864317 Msa0901870:intron 25.0%
!!! TCAATGTTTTAAAATTGGAC+AGG + chr6_1:98864373-98864392 Msa0901870:intron 25.0%
!!! GATTTTTGTTTCAAGACATA+TGG + chr6_1:98864417-98864436 Msa0901870:CDS 25.0%
!!! GTTTTTTTAGGAAAAGCAAA+AGG + chr6_1:98864874-98864893 Msa0901870:intron 25.0%
!! GAATTTTGTTGGATTTTGTT+TGG + chr6_1:98864906-98864925 Msa0901870:CDS 25.0%
! TATTGGATGGTAAAAATTGT+TGG + chr6_1:98864991-98865010 Msa0901870:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr6_1:98865164-98865183 None:intergenic 25.0%
!! ACAATATTTTGCATAGTTCT+TGG - chr6_1:98865350-98865369 None:intergenic 25.0%
! AGAACTATGCAAAATATTGT+TGG + chr6_1:98865350-98865369 Msa0901870:CDS 25.0%
! GAACTATGCAAAATATTGTT+GGG + chr6_1:98865351-98865370 Msa0901870:CDS 25.0%
! TACTTAGAGACTAAATTGAA+TGG - chr6_1:98865585-98865604 None:intergenic 25.0%
! ATAACAATGACTAAAATCGA+CGG - chr6_1:98865674-98865693 None:intergenic 25.0%
! TGATTCATTGATCTGAAAAA+CGG + chr6_1:98866013-98866032 Msa0901870:intron 25.0%
!! AAATAGATTTTCTGCTATCT+AGG + chr6_1:98866643-98866662 Msa0901870:intron 25.0%
!! GTTAATAATGCTTTTCTACA+TGG - chr6_1:98867407-98867426 None:intergenic 25.0%
! CATTATTAACATCCAATTGA+TGG + chr6_1:98867417-98867436 Msa0901870:intron 25.0%
! AGAAAACATAACTTTGATGA+TGG + chr6_1:98867774-98867793 Msa0901870:intron 25.0%
!! GAAAACATAACTTTGATGAT+GGG + chr6_1:98867775-98867794 Msa0901870:intron 25.0%
!!! AAAACATAACTTTGATGATG+GGG + chr6_1:98867776-98867795 Msa0901870:intron 25.0%
! TCTAAGTAAATGTGATTATG+TGG + chr6_1:98868058-98868077 Msa0901870:intron 25.0%
! ATTCAATGATAGAGAATGAA+AGG + chr6_1:98868087-98868106 Msa0901870:intron 25.0%
! TTCAATGATAGAGAATGAAA+GGG + chr6_1:98868088-98868107 Msa0901870:intron 25.0%
!! TGACCTATTTTGTAAAAGTT+TGG + chr6_1:98868339-98868358 Msa0901870:intron 25.0%
!! CAACCAAACTTTTACAAAAT+AGG - chr6_1:98868345-98868364 None:intergenic 25.0%
!! CTATTTTGTAAAAGTTTGGT+TGG + chr6_1:98868343-98868362 Msa0901870:intron 25.0%
! AAGAATACTATGCAGAAAAA+GGG - chr6_1:98868537-98868556 None:intergenic 25.0%
! TCTACTATGATCATCTAAAA+TGG + chr6_1:98868693-98868712 Msa0901870:intron 25.0%
!! TTTTCAACTGAATGTATACA+TGG - chr6_1:98868736-98868755 None:intergenic 25.0%
! ATGTATACATTCAGTTGAAA+AGG + chr6_1:98868735-98868754 Msa0901870:intron 25.0%
! TGTATACATTCAGTTGAAAA+GGG + chr6_1:98868736-98868755 Msa0901870:intron 25.0%
! AAATTTACAACTAGCATTAC+TGG + chr6_1:98869386-98869405 Msa0901870:intron 25.0%
!! GAAATTGCAAATTTGAAACA+AGG - chr6_1:98870122-98870141 None:intergenic 25.0%
! TGATTCATTGATCTGAAAAA+CGG + chr6_1:98866013-98866032 Msa0901870:intron 25.0%
! AGTTGTATCATGATTATTAG+AGG - chr6_1:98870983-98871002 None:intergenic 25.0%
! TATTTAATGATATGTAGGCA+TGG + chr6_1:98871296-98871315 Msa0901870:intron 25.0%
! TTTGAAAATGTTACATTACC+AGG - chr6_1:98871327-98871346 None:intergenic 25.0%
!!! TGGTAATGTAACATTTTCAA+AGG + chr6_1:98871326-98871345 Msa0901870:CDS 25.0%
!! GGTAATGTAACATTTTCAAA+GGG + chr6_1:98871327-98871346 Msa0901870:CDS 25.0%
! ATAACTTTGAATGGAGATTA+GGG + chr6_1:98871460-98871479 Msa0901870:CDS 25.0%
!! GTTTCTTATGTTTCTAATTG+TGG + chr6_1:98871637-98871656 Msa0901870:three_prime_UTR 25.0%
! TATTTGTGTGTAAGTGTTGT+GGG - chr6_1:98862120-98862139 None:intergenic 30.0%
GTTCTTGTTAGTTCAGTTAA+TGG + chr6_1:98862241-98862260 Msa0901870:CDS 30.0%
TCTTGTTAGTTCAGTTAATG+GGG + chr6_1:98862243-98862262 Msa0901870:CDS 30.0%
! AGTAGAGATGTTTTTCCTAA+AGG + chr6_1:98862307-98862326 Msa0901870:CDS 30.0%
! GTAGAGATGTTTTTCCTAAA+GGG + chr6_1:98862308-98862327 Msa0901870:CDS 30.0%
TGAAAACATCCCAAATACTA+GGG - chr6_1:98862399-98862418 None:intergenic 30.0%
ATGAAAACATCCCAAATACT+AGG - chr6_1:98862400-98862419 None:intergenic 30.0%
! GATGTTTTCATCAAAAAACC+TGG + chr6_1:98862409-98862428 Msa0901870:CDS 30.0%
TTTGTAGAAAAACATCTTGC+AGG - chr6_1:98862804-98862823 None:intergenic 30.0%
GATTAATAATTGTTAGGCGA+CGG + chr6_1:98862835-98862854 Msa0901870:intron 30.0%
ACCCAAAAATAAATTTGGAC+CGG - chr6_1:98863062-98863081 None:intergenic 30.0%
!! ATTAATCTTTAGAGTCGCAT+AGG + chr6_1:98863110-98863129 Msa0901870:intron 30.0%
!! TTAATCTTTAGAGTCGCATA+GGG + chr6_1:98863111-98863130 Msa0901870:intron 30.0%
! AAGGTTCATACTAAGGATTT+TGG - chr6_1:98863709-98863728 None:intergenic 30.0%
TCAAGTATGTTCAATTTGAC+AGG + chr6_1:98863810-98863829 Msa0901870:intron 30.0%
GATCGATTACTTACTAGAAA+AGG + chr6_1:98864044-98864063 Msa0901870:CDS 30.0%
TAATGGTAGAGATTTGCATA+AGG - chr6_1:98864183-98864202 None:intergenic 30.0%
TATTTCAACTCAAGAGCTAA+AGG - chr6_1:98864213-98864232 None:intergenic 30.0%
TAAGTACTTACACAACGTTA+CGG - chr6_1:98864251-98864270 None:intergenic 30.0%
GTAAGTACTTAAATACCCTA+TGG + chr6_1:98864260-98864279 Msa0901870:intron 30.0%
! TTTTTCTTTTCATGGCCATA+GGG - chr6_1:98864278-98864297 None:intergenic 30.0%
!!! TTTTTTCTTTTCATGGCCAT+AGG - chr6_1:98864279-98864298 None:intergenic 30.0%
! ATTCTTTTGAACATCTTCCA+GGG - chr6_1:98864521-98864540 None:intergenic 30.0%
! TATTCTTTTGAACATCTTCC+AGG - chr6_1:98864522-98864541 None:intergenic 30.0%
GGAAGATGTTCAAAAGAATA+TGG + chr6_1:98864522-98864541 Msa0901870:CDS 30.0%
AAATTGTGAGCTACAGTATA+AGG - chr6_1:98864579-98864598 None:intergenic 30.0%
AAGATATAGAGAGAAATACC+AGG + chr6_1:98864626-98864645 Msa0901870:CDS 30.0%
TTATCTTGTAGTGATGATTG+TGG + chr6_1:98864852-98864871 Msa0901870:intron 30.0%
!!! GTGATGATTGTGGTTTTTTT+AGG + chr6_1:98864862-98864881 Msa0901870:intron 30.0%
AGAGCTAGAGACTTTAATAT+TGG + chr6_1:98864974-98864993 Msa0901870:CDS 30.0%
CTAGAGACTTTAATATTGGA+TGG + chr6_1:98864978-98864997 Msa0901870:CDS 30.0%
CATAAGAATTGTATGATGCA+CGG + chr6_1:98865075-98865094 Msa0901870:intron 30.0%
ACAAATATGAAGCACAGATA+CGG - chr6_1:98865256-98865275 None:intergenic 30.0%
! TTATGGTGTTTAATTTCCAC+AGG + chr6_1:98865294-98865313 Msa0901870:intron 30.0%
ATTGATACCAACAGAATCAA+TGG - chr6_1:98865426-98865445 None:intergenic 30.0%
TATCAATCAGATTGGAATGT+AGG + chr6_1:98865503-98865522 Msa0901870:CDS 30.0%
ATCAATCAGATTGGAATGTA+GGG + chr6_1:98865504-98865523 Msa0901870:CDS 30.0%
TTAGAGACTAAATTGAATGG+TGG - chr6_1:98865582-98865601 None:intergenic 30.0%
AGTATCATTCTCTCCAATTT+AGG + chr6_1:98865601-98865620 Msa0901870:intron 30.0%
AAGAAAATCAATGTCAGTCA+TGG - chr6_1:98865828-98865847 None:intergenic 30.0%
AATATGGAAGATGCTAAGAA+TGG + chr6_1:98865852-98865871 Msa0901870:intron 30.0%
ACTTGTTTCAAACTTACTCT+TGG - chr6_1:98865891-98865910 None:intergenic 30.0%
TCTTAGAATGAAAATCACCA+TGG + chr6_1:98865928-98865947 Msa0901870:intron 30.0%
TGTTGATGCATTCATAAAAC+TGG + chr6_1:98866256-98866275 Msa0901870:intron 30.0%
!! TTTGATTTTGGGAAGAAACA+GGG + chr6_1:98866313-98866332 Msa0901870:intron 30.0%
ACAATCAATATCCAAGTGTT+TGG + chr6_1:98866380-98866399 Msa0901870:intron 30.0%
GATAGCAGAAAATCTATTTC+TGG - chr6_1:98866642-98866661 None:intergenic 30.0%
ACAACAATTGAGTCAGTTTA+TGG - chr6_1:98866808-98866827 None:intergenic 30.0%
AAACTCCTCAAATCATTGTA+TGG - chr6_1:98867314-98867333 None:intergenic 30.0%
TTATACACAAACTGAAGGTT+TGG - chr6_1:98867528-98867547 None:intergenic 30.0%
! TGTTGCTATTGGAAGTAAAT+GGG - chr6_1:98867618-98867637 None:intergenic 30.0%
AAGCATGTAAAGATTCCAAA+TGG - chr6_1:98867718-98867737 None:intergenic 30.0%
! ATAACACACATAGTTTGTCA+TGG + chr6_1:98867811-98867830 Msa0901870:intron 30.0%
! TAACACACATAGTTTGTCAT+GGG + chr6_1:98867812-98867831 Msa0901870:intron 30.0%
! ACATAGTCTTGCAAATAAGA+TGG + chr6_1:98867854-98867873 Msa0901870:intron 30.0%
TAAATGTGATTATGTGGAAG+AGG + chr6_1:98868064-98868083 Msa0901870:intron 30.0%
TCAAATTTGTGTCTGTTAAC+AGG + chr6_1:98868235-98868254 Msa0901870:intron 30.0%
! TGAGTCATCTTAAAGTGTTT+GGG - chr6_1:98868285-98868304 None:intergenic 30.0%
GTGTATAAACACAACTTCTT+TGG + chr6_1:98868503-98868522 Msa0901870:intron 30.0%
CAAGAATACTATGCAGAAAA+AGG - chr6_1:98868538-98868557 None:intergenic 30.0%
TAAATCAGAAGCTTCATCTA+AGG - chr6_1:98868647-98868666 None:intergenic 30.0%
TCTTGTGCATGTTGATATTT+GGG - chr6_1:98868764-98868783 None:intergenic 30.0%
ATCTTGTGCATGTTGATATT+TGG - chr6_1:98868765-98868784 None:intergenic 30.0%
! TTTTATGGCATCTTAGACTT+GGG - chr6_1:98868936-98868955 None:intergenic 30.0%
!! AGATTGTGTTCTGAATTTTG+AGG - chr6_1:98869127-98869146 None:intergenic 30.0%
!! TTTACCAAATAAGAGTGTTG+TGG - chr6_1:98869265-98869284 None:intergenic 30.0%
AAGCAATTAGACTTTGATAC+TGG + chr6_1:98869499-98869518 Msa0901870:intron 30.0%
! AATCAACAGAGTTTTCTCTA+TGG - chr6_1:98869871-98869890 None:intergenic 30.0%
! AACTACACAAGTGTTGTTAA+TGG - chr6_1:98869907-98869926 None:intergenic 30.0%
AGAATCATCAAGTTTCTGAT+GGG - chr6_1:98869954-98869973 None:intergenic 30.0%
TAGAATCATCAAGTTTCTGA+TGG - chr6_1:98869955-98869974 None:intergenic 30.0%
ACAAGGAACTAAGAAAGTTA+CGG - chr6_1:98870105-98870124 None:intergenic 30.0%
! GCAATAATCTAGTTCATACT+TGG - chr6_1:98870274-98870293 None:intergenic 30.0%
TATAGCAAATCATCTTCTTC+AGG + chr6_1:98870311-98870330 Msa0901870:intron 30.0%
AAATCATCTTCTTCAGGTAT+TGG + chr6_1:98870317-98870336 Msa0901870:intron 30.0%
AGAAAATTCTTCAACGGTTA+CGG - chr6_1:98870444-98870463 None:intergenic 30.0%
TCCTTCAGAAAATTCTTCAA+CGG - chr6_1:98870450-98870469 None:intergenic 30.0%
TTCGTTTGTGATTGAATCTT+CGG - chr6_1:98870545-98870564 None:intergenic 30.0%
ATCGTTCTATCTATATCATG+CGG + chr6_1:98870651-98870670 Msa0901870:intron 30.0%
!! TGGTGATTTTCATTCTAAGA+TGG - chr6_1:98865928-98865947 None:intergenic 30.0%
TCTTAGAATGAAAATCACCA+TGG + chr6_1:98865928-98865947 Msa0901870:intron 30.0%
TCATGATTATTAGAGGAAAG+AGG - chr6_1:98870976-98870995 None:intergenic 30.0%
CAAATCAGTAATGTACATCA+AGG + chr6_1:98871124-98871143 Msa0901870:CDS 30.0%
TTTCAGATAAGTACATAGGT+GGG - chr6_1:98871163-98871182 None:intergenic 30.0%
! TTTTCAGATAAGTACATAGG+TGG - chr6_1:98871164-98871183 None:intergenic 30.0%
! CCATTTTCAGATAAGTACAT+AGG - chr6_1:98871167-98871186 None:intergenic 30.0%
CCTATGTACTTATCTGAAAA+TGG + chr6_1:98871164-98871183 Msa0901870:CDS 30.0%
ATTCATCCTTACGAAAAGAA+GGG - chr6_1:98871246-98871265 None:intergenic 30.0%
AATTCATCCTTACGAAAAGA+AGG - chr6_1:98871247-98871266 None:intergenic 30.0%
CTAAAGAAAGCTATAGATGA+TGG + chr6_1:98871399-98871418 Msa0901870:CDS 30.0%
! CATTGCTTGATAACTTTGAA+TGG + chr6_1:98871451-98871470 Msa0901870:CDS 30.0%
GATAACTTTGAATGGAGATT+AGG + chr6_1:98871459-98871478 Msa0901870:CDS 30.0%
! CTCAGCAATTTACTTCTTTT+TGG - chr6_1:98871577-98871596 None:intergenic 30.0%
GTTTCTTAGGTTTCTAATTG+TGG + chr6_1:98871608-98871627 Msa0901870:intron 30.0%
! GTGAATAATGTTTGTGGTTT+TGG + chr6_1:98871662-98871681 Msa0901870:three_prime_UTR 30.0%
!!! GTTTGTGGTTTTGGATAAAA+AGG + chr6_1:98871671-98871690 Msa0901870:three_prime_UTR 30.0%
! CTATTTGTGTGTAAGTGTTG+TGG - chr6_1:98862121-98862140 None:intergenic 35.0%
! CTAGTGTTATTGTCTGAACA+TGG + chr6_1:98862159-98862178 Msa0901870:exon 35.0%
TTTCCTAAAGGGTTTGTGTT+TGG + chr6_1:98862319-98862338 Msa0901870:CDS 35.0%
AACTTCTGCTTATCAAGTAG+AGG + chr6_1:98862348-98862367 Msa0901870:CDS 35.0%
ACTTCTGCTTATCAAGTAGA+GGG + chr6_1:98862349-98862368 Msa0901870:CDS 35.0%
CAACAATGACTTAGTTCAAG+TGG + chr6_1:98862693-98862712 Msa0901870:intron 35.0%
ACTTAGACCTTCTAAGTTTG+TGG + chr6_1:98862722-98862741 Msa0901870:intron 35.0%
! GATTTGGTTTACCTGTTTGT+CGG + chr6_1:98862923-98862942 Msa0901870:intron 35.0%
!! TCCCGGTCCAAATTTATTTT+TGG + chr6_1:98863057-98863076 Msa0901870:intron 35.0%
CCCAAAAATAAATTTGGACC+GGG - chr6_1:98863061-98863080 None:intergenic 35.0%
!! CCCGGTCCAAATTTATTTTT+GGG + chr6_1:98863058-98863077 Msa0901870:intron 35.0%
ACCTAACCTTGAGATCAAAT+TGG + chr6_1:98863497-98863516 Msa0901870:intron 35.0%
ACCAATTTGATCTCAAGGTT+AGG - chr6_1:98863501-98863520 None:intergenic 35.0%
GCTTAACCAATTTGATCTCA+AGG - chr6_1:98863506-98863525 None:intergenic 35.0%
ACAGGAAGATATAGATCTCA+TGG + chr6_1:98863828-98863847 Msa0901870:intron 35.0%
ATGGAACTGGCAAAGTAAAT+TGG + chr6_1:98863995-98864014 Msa0901870:CDS 35.0%
ACTGGCAAAGTAAATTGGAA+AGG + chr6_1:98864000-98864019 Msa0901870:CDS 35.0%
!! GCTCTTGAGTTGAAATACAA+TGG + chr6_1:98864216-98864235 Msa0901870:CDS 35.0%
! ATTGGACAGGAAAGATTTTG+CGG + chr6_1:98864386-98864405 Msa0901870:intron 35.0%
! TTCTTTTGAACATCTTCCAG+GGG - chr6_1:98864520-98864539 None:intergenic 35.0%
GAATATGGAAATTGTACAGC+TGG + chr6_1:98864537-98864556 Msa0901870:CDS 35.0%
AATTGTACAGCTGGAAATTC+AGG + chr6_1:98864546-98864565 Msa0901870:CDS 35.0%
TGAGTTTGTCAGAATCATGA+TGG + chr6_1:98864701-98864720 Msa0901870:intron 35.0%
GAGTTTGTCAGAATCATGAT+GGG + chr6_1:98864702-98864721 Msa0901870:intron 35.0%
! AGTTTTTGCCGAAATCACTA+TGG - chr6_1:98864728-98864747 None:intergenic 35.0%
TCAGCTTCAACAAAATCACA+TGG + chr6_1:98864753-98864772 Msa0901870:intron 35.0%
! GATTTTCATGATGCACTAAG+TGG + chr6_1:98864805-98864824 Msa0901870:intron 35.0%
TTTAGGAAAAGCAAAAGGGT+AGG + chr6_1:98864879-98864898 Msa0901870:intron 35.0%
!! GTTGTTTCTGTTGTACTAGT+TGG - chr6_1:98865053-98865072 None:intergenic 35.0%
CGTGCATCATACAATTCTTA+TGG - chr6_1:98865077-98865096 None:intergenic 35.0%
! TTCATTCATCCCCTTGTTTA+TGG + chr6_1:98865317-98865336 Msa0901870:CDS 35.0%
TGGATACTCACCATAAACAA+GGG - chr6_1:98865330-98865349 None:intergenic 35.0%
TTGGATACTCACCATAAACA+AGG - chr6_1:98865331-98865350 None:intergenic 35.0%
CTTCCTCCTTAGTAAACTTT+GGG - chr6_1:98865385-98865404 None:intergenic 35.0%
ACTTCCTCCTTAGTAAACTT+TGG - chr6_1:98865386-98865405 None:intergenic 35.0%
!!! ACTTTTGGTTTTGCTTGATG+AGG - chr6_1:98865476-98865495 None:intergenic 35.0%
GAAATGCATGTGAGTTAACT+TGG + chr6_1:98866114-98866133 Msa0901870:intron 35.0%
TTTATCAACCTCCATCTTGT+GGG - chr6_1:98866218-98866237 None:intergenic 35.0%
ATTTATCAACCTCCATCTTG+TGG - chr6_1:98866219-98866238 None:intergenic 35.0%
TATGAATGCATCAACAAGCT+AGG - chr6_1:98866252-98866271 None:intergenic 35.0%
AACTGCAGATGTCTTTACAA+AGG - chr6_1:98866295-98866314 None:intergenic 35.0%
!! AGACATCTGCAGTTTGATTT+TGG + chr6_1:98866301-98866320 Msa0901870:intron 35.0%
!! GACATCTGCAGTTTGATTTT+GGG + chr6_1:98866302-98866321 Msa0901870:intron 35.0%
!! GTTTGATTTTGGGAAGAAAC+AGG + chr6_1:98866312-98866331 Msa0901870:intron 35.0%
TGATTGTCACAGTAAAGTAC+AGG + chr6_1:98866447-98866466 Msa0901870:intron 35.0%
TAAAGTACAGGTAAACGAGA+TGG + chr6_1:98866459-98866478 Msa0901870:intron 35.0%
AGAAGCAGAATATAGAGCTT+TGG - chr6_1:98866544-98866563 None:intergenic 35.0%
CTTCTTCATTGGTAGATCTT+TGG - chr6_1:98866613-98866632 None:intergenic 35.0%
TCTGGTTATTGCTTCTTCAT+TGG - chr6_1:98866624-98866643 None:intergenic 35.0%
TCATTATCAAGCTGCACTTA+GGG - chr6_1:98866769-98866788 None:intergenic 35.0%
TTCATTATCAAGCTGCACTT+AGG - chr6_1:98866770-98866789 None:intergenic 35.0%
TTTGCCTATAGAAGGTTAGT+GGG - chr6_1:98866879-98866898 None:intergenic 35.0%
! AAGGTATTACTTTGTGCCAA+AGG - chr6_1:98867019-98867038 None:intergenic 35.0%
TTGGCACAAAGTAATACCTT+TGG + chr6_1:98867019-98867038 Msa0901870:intron 35.0%
GGCAGCTTAAATTCTTTCTT+GGG - chr6_1:98867064-98867083 None:intergenic 35.0%
GTAGATGACATTATTCTTGC+TGG - chr6_1:98867155-98867174 None:intergenic 35.0%
! CACTAAAAGTGCAGTAAAAG+AGG + chr6_1:98867178-98867197 Msa0901870:intron 35.0%
! TAAAAGTGCAGTAAAAGAGG+AGG + chr6_1:98867181-98867200 Msa0901870:intron 35.0%
!!! GGCAGTGGTTTTAATGAATA+AGG + chr6_1:98867202-98867221 Msa0901870:intron 35.0%
GAACAAAACCTTGTGCATAA+AGG + chr6_1:98867243-98867262 Msa0901870:intron 35.0%
ACTCAATTCCTTTATGCACA+AGG - chr6_1:98867254-98867273 None:intergenic 35.0%
TCAGACCATACAATGATTTG+AGG + chr6_1:98867306-98867325 Msa0901870:intron 35.0%
TTACAAACCTGACCTGATTT+AGG + chr6_1:98867332-98867351 Msa0901870:intron 35.0%
TCTACATGGAGATTTGAATG+AGG - chr6_1:98867393-98867412 None:intergenic 35.0%
AGATTAAGAGACATGCAGAT+GGG - chr6_1:98867589-98867608 None:intergenic 35.0%
AAGATTAAGAGACATGCAGA+TGG - chr6_1:98867590-98867609 None:intergenic 35.0%
! CTGTTGCTATTGGAAGTAAA+TGG - chr6_1:98867619-98867638 None:intergenic 35.0%
CTCTCAATGCTAATCATACT+TGG - chr6_1:98867667-98867686 None:intergenic 35.0%
TGCTATGCAGAATGAAATAG+AGG - chr6_1:98867690-98867709 None:intergenic 35.0%
! ACATGCTTGATGATAAGTAG+TGG + chr6_1:98867730-98867749 Msa0901870:intron 35.0%
! CATGCTTGATGATAAGTAGT+GGG + chr6_1:98867731-98867750 Msa0901870:intron 35.0%
! AACACACATAGTTTGTCATG+GGG + chr6_1:98867813-98867832 Msa0901870:intron 35.0%
GTTTGTCATGGGGTAATTAT+TGG + chr6_1:98867823-98867842 Msa0901870:intron 35.0%
! TAGTCTTGCAAATAAGATGG+AGG + chr6_1:98867857-98867876 Msa0901870:intron 35.0%
! AGATGTCAGTGATGATAATG+AGG - chr6_1:98867966-98867985 None:intergenic 35.0%
! ACAAATGAAGTGTCTTCAAC+TGG + chr6_1:98867989-98868008 Msa0901870:intron 35.0%
AAACCAAGATCTCAGTGTTA+TGG + chr6_1:98868143-98868162 Msa0901870:intron 35.0%
AGGCATGAAAGGTTATATTC+TGG - chr6_1:98868176-98868195 None:intergenic 35.0%
GCAAAGAAATGTGCATTTCT+GGG - chr6_1:98868208-98868227 None:intergenic 35.0%
AGCAAAGAAATGTGCATTTC+TGG - chr6_1:98868209-98868228 None:intergenic 35.0%
AAATGCACATTTCTTTGCTC+TGG + chr6_1:98868210-98868229 Msa0901870:intron 35.0%
AATGCACATTTCTTTGCTCT+GGG + chr6_1:98868211-98868230 Msa0901870:intron 35.0%
! CTGAGTCATCTTAAAGTGTT+TGG - chr6_1:98868286-98868305 None:intergenic 35.0%
!! ACTTTAAGATGACTCAGATC+AGG + chr6_1:98868289-98868308 Msa0901870:intron 35.0%
GCATATGACCAAAACTTCTT+TGG + chr6_1:98868400-98868419 Msa0901870:intron 35.0%
! CCAAATTGCCAAAGAAGTTT+TGG - chr6_1:98868411-98868430 None:intergenic 35.0%
CCAAAACTTCTTTGGCAATT+TGG + chr6_1:98868408-98868427 Msa0901870:intron 35.0%
AAAATGGAAGAGTGGAAAGA+AGG - chr6_1:98868477-98868496 None:intergenic 35.0%
! TTTCCACTCTTCCATTTTGT+TGG + chr6_1:98868479-98868498 Msa0901870:intron 35.0%
! TTCCACTCTTCCATTTTGTT+GGG + chr6_1:98868480-98868499 Msa0901870:intron 35.0%
GTTTATACACCCCAACAAAA+TGG - chr6_1:98868493-98868512 None:intergenic 35.0%
TATTCTTGCAACAAGAACTC+AGG + chr6_1:98868550-98868569 Msa0901870:intron 35.0%
AAGTCCATTAGAAGTGACAA+TGG - chr6_1:98868577-98868596 None:intergenic 35.0%
TGATCATAGTAGACATGTGT+GGG - chr6_1:98868686-98868705 None:intergenic 35.0%
ATGATCATAGTAGACATGTG+TGG - chr6_1:98868687-98868706 None:intergenic 35.0%
CTTGTGCATGTTGATATTTG+GGG - chr6_1:98868763-98868782 None:intergenic 35.0%
! GTTTTATGGCATCTTAGACT+TGG - chr6_1:98868937-98868956 None:intergenic 35.0%
GTGTATTATACAGGACAAGA+AGG - chr6_1:98869097-98869116 None:intergenic 35.0%
GGCTAATCAGTGTATTATAC+AGG - chr6_1:98869106-98869125 None:intergenic 35.0%
! GTAAATTTGATGACACTAGC+TGG - chr6_1:98869374-98869393 None:intergenic 35.0%
!! TAGACTTTGATACTGGTCTT+TGG + chr6_1:98869506-98869525 Msa0901870:intron 35.0%
ACTGTGAAAAATGAAGAAGG+TGG - chr6_1:98869543-98869562 None:intergenic 35.0%
!! ACCTTCTTCATTTTTCACAG+TGG + chr6_1:98869542-98869561 Msa0901870:intron 35.0%
TCCACTGTGAAAAATGAAGA+AGG - chr6_1:98869546-98869565 None:intergenic 35.0%
GTGAAGAAACTGAGTCTAAA+GGG - chr6_1:98869575-98869594 None:intergenic 35.0%
GAAACATGTTACAAGAAGCA+TGG - chr6_1:98869660-98869679 None:intergenic 35.0%
CAATAGAACTAATCACACTG+TGG - chr6_1:98869682-98869701 None:intergenic 35.0%
CAGAAGCTGTATCATCTATA+GGG + chr6_1:98869802-98869821 Msa0901870:intron 35.0%
AGAAGCTGTATCATCTATAG+GGG + chr6_1:98869803-98869822 Msa0901870:intron 35.0%
!! GAGAAAACTCTGTTGATTTG+AGG + chr6_1:98869873-98869892 Msa0901870:intron 35.0%
!! ACTCTGTTGATTTGAGGTAA+AGG + chr6_1:98869879-98869898 Msa0901870:intron 35.0%
GCTAAACAAGTGCATTGAAT+TGG + chr6_1:98870008-98870027 Msa0901870:intron 35.0%
!!! GAGTTTTTCACTGATTTGAG+AGG - chr6_1:98870083-98870102 None:intergenic 35.0%
CATGAGAGGTGATAGAATTA+GGG - chr6_1:98870162-98870181 None:intergenic 35.0%
TCATGAGAGGTGATAGAATT+AGG - chr6_1:98870163-98870182 None:intergenic 35.0%
TGATATGTGGAATGATCTCA+AGG - chr6_1:98870192-98870211 None:intergenic 35.0%
TTGAGAATGCTGTTGATATG+TGG - chr6_1:98870205-98870224 None:intergenic 35.0%
ACTACACTTTGAGCAATTGA+AGG + chr6_1:98870230-98870249 Msa0901870:intron 35.0%
!! ATCTTCTTCAGGTATTGGTA+TGG + chr6_1:98870322-98870341 Msa0901870:intron 35.0%
! ACCGTTGAAGAATTTTCTGA+AGG + chr6_1:98870446-98870465 Msa0901870:intron 35.0%
TTGAATCTTCGGTTCAACAA+TGG - chr6_1:98870534-98870553 None:intergenic 35.0%
GAAATGCATGTGAGTTAACT+TGG + chr6_1:98866114-98866133 Msa0901870:intron 35.0%
!! CTTTTCAGGCATATTCATCT+TGG + chr6_1:98871075-98871094 Msa0901870:intron 35.0%
TTGGCTATACAATGTACCAT+GGG + chr6_1:98871094-98871113 Msa0901870:CDS 35.0%
! TCTTAACCCTTCTTTTCGTA+AGG + chr6_1:98871237-98871256 Msa0901870:intron 35.0%
ACCAATATGCAGACATCTTA+GGG - chr6_1:98871539-98871558 None:intergenic 35.0%
AACCAATATGCAGACATCTT+AGG - chr6_1:98871540-98871559 None:intergenic 35.0%
! GTGGTAGTGAATAATGTTTG+TGG + chr6_1:98871656-98871675 Msa0901870:three_prime_UTR 35.0%
! TGGATAAAAAGGCCTCTTTT+TGG + chr6_1:98871682-98871701 Msa0901870:three_prime_UTR 35.0%
ACATTGTAGAGACCAAAAAG+AGG - chr6_1:98871697-98871716 None:intergenic 35.0%
! TTGTCTGAACATGGTGATGT+TGG + chr6_1:98862168-98862187 Msa0901870:exon 40.0%
GTATCCAAATGCACTGTTTC+AGG - chr6_1:98862277-98862296 None:intergenic 40.0%
GAAACAGTGCATTTGGATAC+TGG + chr6_1:98862277-98862296 Msa0901870:CDS 40.0%
ACTCCAAACACAAACCCTTT+AGG - chr6_1:98862325-98862344 None:intergenic 40.0%
TGCTTATCAAGTAGAGGGTA+TGG + chr6_1:98862354-98862373 Msa0901870:CDS 40.0%
TTAGGTGAGAAACACAAACC+AGG - chr6_1:98862430-98862449 None:intergenic 40.0%
! TGTCTCTTTTTCCGACAAAC+AGG - chr6_1:98862937-98862956 None:intergenic 40.0%
CACTCTTTATACGATCACGA+TGG + chr6_1:98862955-98862974 Msa0901870:intron 40.0%
TGCTAAGAGGCCTATAAGAA+TGG + chr6_1:98863338-98863357 Msa0901870:intron 40.0%
ACAGGGATTGTCGCAAATAA+TGG + chr6_1:98863574-98863593 Msa0901870:intron 40.0%
ATTGTCGCAAATAATGGCAC+AGG + chr6_1:98863580-98863599 Msa0901870:CDS 40.0%
!! AATACCGGTTCTCAATCTCA+TGG + chr6_1:98863869-98863888 Msa0901870:CDS 40.0%
ACTATTGATGCAGATGGAAC+TGG + chr6_1:98863982-98864001 Msa0901870:intron 40.0%
GTTCCTTAAACCTATGTTGC+AGG + chr6_1:98864150-98864169 Msa0901870:intron 40.0%
ATGCCTGCAACATAGGTTTA+AGG - chr6_1:98864156-98864175 None:intergenic 40.0%
GAGCTAAAGGAAGGTCATAA+TGG - chr6_1:98864200-98864219 None:intergenic 40.0%
TCAACTCAAGAGCTAAAGGA+AGG - chr6_1:98864209-98864228 None:intergenic 40.0%
AACAACTCCTGGTTCATTGA+AGG - chr6_1:98864466-98864485 None:intergenic 40.0%
!! ATGATGGGCCATAGTGATTT+CGG + chr6_1:98864717-98864736 Msa0901870:intron 40.0%
GAAAAGCAAAAGGGTAGGAT+TGG + chr6_1:98864884-98864903 Msa0901870:CDS 40.0%
! GGGTAGGATTGGAATTTTGT+TGG + chr6_1:98864895-98864914 Msa0901870:CDS 40.0%
TGAGCCTCTTACAAGATCAA+AGG + chr6_1:98864931-98864950 Msa0901870:CDS 40.0%
TCAGCCTTTGATCTTGTAAG+AGG - chr6_1:98864938-98864957 None:intergenic 40.0%
GGATACTCACCATAAACAAG+GGG - chr6_1:98865329-98865348 None:intergenic 40.0%
CAGACTCCCAAAGTTTACTA+AGG + chr6_1:98865376-98865395 Msa0901870:CDS 40.0%
ACTCCCAAAGTTTACTAAGG+AGG + chr6_1:98865379-98865398 Msa0901870:CDS 40.0%
GAGGAAGTGAAACTTGTGAA+GGG + chr6_1:98865398-98865417 Msa0901870:CDS 40.0%
! TCCAATCTGATTGATAGCCA+GGG - chr6_1:98865499-98865518 None:intergenic 40.0%
! TTCCAATCTGATTGATAGCC+AGG - chr6_1:98865500-98865519 None:intergenic 40.0%
AAACTTACTCTTGGTCCAAC+AGG - chr6_1:98865882-98865901 None:intergenic 40.0%
AAGAGGAGAAGAGAAACAAG+AGG - chr6_1:98866181-98866200 None:intergenic 40.0%
TTATCAACCTCCATCTTGTG+GGG - chr6_1:98866217-98866236 None:intergenic 40.0%
ATGCATTCATAAAACTGGCG+TGG + chr6_1:98866261-98866280 Msa0901870:intron 40.0%
GATGTCTTTACAAAGGCTTC+AGG - chr6_1:98866288-98866307 None:intergenic 40.0%
TCATGAACGTACCAAACACT+TGG - chr6_1:98866394-98866413 None:intergenic 40.0%
TTGGTACGTTCATGAAACAC+TGG + chr6_1:98866399-98866418 Msa0901870:intron 40.0%
TGGTACGTTCATGAAACACT+GGG + chr6_1:98866400-98866419 Msa0901870:intron 40.0%
TCTATATTCTGCTTCTGCAG+AGG + chr6_1:98866548-98866567 Msa0901870:intron 40.0%
TTGGTAGATCTTTGGTCTCT+TGG - chr6_1:98866605-98866624 None:intergenic 40.0%
CATCTGATCTTCAGCTGTTA+GGG - chr6_1:98866695-98866714 None:intergenic 40.0%
TCATCTGATCTTCAGCTGTT+AGG - chr6_1:98866696-98866715 None:intergenic 40.0%
ACAGCTGAAGATCAGATGAT+TGG + chr6_1:98866697-98866716 Msa0901870:intron 40.0%
CAGCTGAAGATCAGATGATT+GGG + chr6_1:98866698-98866717 Msa0901870:intron 40.0%
GATACCTCAAAAGATCACCT+GGG - chr6_1:98866740-98866759 None:intergenic 40.0%
AGATACCTCAAAAGATCACC+TGG - chr6_1:98866741-98866760 None:intergenic 40.0%
!! GCTTGATAATGAAGAGCAGT+AGG + chr6_1:98866777-98866796 Msa0901870:intron 40.0%
TGTGTAGCATATGCAATGTC+AGG + chr6_1:98866825-98866844 Msa0901870:intron 40.0%
TTGCCTATAGAAGGTTAGTG+GGG - chr6_1:98866878-98866897 None:intergenic 40.0%
GTTTGCCTATAGAAGGTTAG+TGG - chr6_1:98866880-98866899 None:intergenic 40.0%
CTGATGTGTTTGCCTATAGA+AGG - chr6_1:98866887-98866906 None:intergenic 40.0%
CTTCTATAGGCAAACACATC+AGG + chr6_1:98866885-98866904 Msa0901870:intron 40.0%
ACTAGATTGCATCAAGATGG+AGG - chr6_1:98866921-98866940 None:intergenic 40.0%
GCTACTAGATTGCATCAAGA+TGG - chr6_1:98866924-98866943 None:intergenic 40.0%
TCTTGATGCAATCTAGTAGC+TGG + chr6_1:98866924-98866943 Msa0901870:intron 40.0%
AATCTAGTAGCTGGATCAAG+AGG + chr6_1:98866933-98866952 Msa0901870:intron 40.0%
! GTATTGTTTGGAGCTCTTAG+AGG - chr6_1:98866994-98867013 None:intergenic 40.0%
GCTCCAAACAATACTTCCTT+TGG + chr6_1:98867000-98867019 Msa0901870:intron 40.0%
!! GTGCCAAAGGAAGTATTGTT+TGG - chr6_1:98867006-98867025 None:intergenic 40.0%
GCACAAAGTAATACCTTTGG+AGG + chr6_1:98867022-98867041 Msa0901870:intron 40.0%
GGGCAGCTTAAATTCTTTCT+TGG - chr6_1:98867065-98867084 None:intergenic 40.0%
TGTATCAAACTCAGTGAGAG+AGG + chr6_1:98867127-98867146 Msa0901870:intron 40.0%
!! TGGCTCTAGCATCAATTCAT+GGG - chr6_1:98867451-98867470 None:intergenic 40.0%
TACCCTGATAGTTGACATCT+TGG + chr6_1:98867475-98867494 Msa0901870:intron 40.0%
TGCCAAGATGTCAACTATCA+GGG - chr6_1:98867480-98867499 None:intergenic 40.0%
TTGCCAAGATGTCAACTATC+AGG - chr6_1:98867481-98867500 None:intergenic 40.0%
ATAGTTGACATCTTGGCAAC+AGG + chr6_1:98867482-98867501 Msa0901870:intron 40.0%
CAGGGTTATACACAAACTGA+AGG - chr6_1:98867533-98867552 None:intergenic 40.0%
CTTCCAATAGCAACAGCATT+TGG + chr6_1:98867623-98867642 Msa0901870:intron 40.0%
CTGCATAGCAACTAACCATT+TGG + chr6_1:98867700-98867719 Msa0901870:intron 40.0%
ACTCTTTGTGACCTTCTAAC+AGG + chr6_1:98867887-98867906 Msa0901870:intron 40.0%
TTCAACCTTCACCTGTTAGA+AGG - chr6_1:98867901-98867920 None:intergenic 40.0%
! AGTGTCTTCAACTGGTTCAT+TGG + chr6_1:98867997-98868016 Msa0901870:intron 40.0%
TGTCCATAACACTGAGATCT+TGG - chr6_1:98868149-98868168 None:intergenic 40.0%
GGTTATAAGTCAGGCATGAA+AGG - chr6_1:98868187-98868206 None:intergenic 40.0%
! GCATTTCTGGGTTATAAGTC+AGG - chr6_1:98868196-98868215 None:intergenic 40.0%
ATGCACATTTCTTTGCTCTG+GGG + chr6_1:98868212-98868231 Msa0901870:intron 40.0%
! TCCACTCTTCCATTTTGTTG+GGG + chr6_1:98868481-98868500 Msa0901870:intron 40.0%
! AGGTCCATTGTCACTTCTAA+TGG + chr6_1:98868570-98868589 Msa0901870:intron 40.0%
ACAAGCTACATGAGAAGTAG+TGG + chr6_1:98868858-98868877 Msa0901870:intron 40.0%
AGATGCCATAAAACTCCAGA+AGG + chr6_1:98868943-98868962 Msa0901870:intron 40.0%
!!! CAGTTCCTTCTGGAGTTTTA+TGG - chr6_1:98868951-98868970 None:intergenic 40.0%
GAAAGTAGTTCAGTTCCTTC+TGG - chr6_1:98868961-98868980 None:intergenic 40.0%
! GGATGGACTCTATTACTTGA+AGG - chr6_1:98869043-98869062 None:intergenic 40.0%
AAGAAGGATTTGAGGAGGAT+TGG - chr6_1:98869081-98869100 None:intergenic 40.0%
TACAGGACAAGAAGGATTTG+AGG - chr6_1:98869089-98869108 None:intergenic 40.0%
ATCAGATTCACAGCAAACTG+TGG + chr6_1:98869174-98869193 Msa0901870:intron 40.0%
!! ACCAAATAAGAGTGTTGTGG+AGG - chr6_1:98869262-98869281 None:intergenic 40.0%
ACACTTGTCATGATTGGAAC+TGG - chr6_1:98869326-98869345 None:intergenic 40.0%
TCCAATCATGACAAGTGTGA+TGG + chr6_1:98869328-98869347 Msa0901870:intron 40.0%
CCAATCATGACAAGTGTGAT+GGG + chr6_1:98869329-98869348 Msa0901870:intron 40.0%
AGTTCAACTATGAATGCTGC+AGG - chr6_1:98869423-98869442 None:intergenic 40.0%
AGGCTCTGCAAATTTGATGA+AGG - chr6_1:98869451-98869470 None:intergenic 40.0%
CATCAAATTTGCAGAGCCTT+TGG + chr6_1:98869452-98869471 Msa0901870:intron 40.0%
AGAAGCAATACTGAAGCCAA+AGG - chr6_1:98869471-98869490 None:intergenic 40.0%
GGTGAAGAAACTGAGTCTAA+AGG - chr6_1:98869576-98869595 None:intergenic 40.0%
ACCTTCAGCAAAGTTAGCAT+TGG + chr6_1:98869593-98869612 Msa0901870:intron 40.0%
ATTGCAAAAACTGCACACTC+TGG + chr6_1:98869698-98869717 Msa0901870:intron 40.0%
TTGCAAAAACTGCACACTCT+GGG + chr6_1:98869699-98869718 Msa0901870:intron 40.0%
!! TTCTGGTCTTGTGAATGCTA+TGG - chr6_1:98869787-98869806 None:intergenic 40.0%
CCTATAGATGATACAGCTTC+TGG - chr6_1:98869804-98869823 None:intergenic 40.0%
CCAGAAGCTGTATCATCTAT+AGG + chr6_1:98869801-98869820 Msa0901870:intron 40.0%
ACAAGTGCATTGAATTGGAC+AGG + chr6_1:98870013-98870032 Msa0901870:intron 40.0%
!! CACTGATTTGAGAGGTTTGT+GGG - chr6_1:98870075-98870094 None:intergenic 40.0%
!! TCACTGATTTGAGAGGTTTG+TGG - chr6_1:98870076-98870095 None:intergenic 40.0%
CTCAAGGATAGATTCATGAG+AGG - chr6_1:98870176-98870195 None:intergenic 40.0%
!! TGATTTGCTATACGCAGCTT+GGG - chr6_1:98870303-98870322 None:intergenic 40.0%
!! ATGATTTGCTATACGCAGCT+TGG - chr6_1:98870304-98870323 None:intergenic 40.0%
! CCAAGAGTGATAGTTTTCAC+CGG + chr6_1:98870403-98870422 Msa0901870:intron 40.0%
!! TAGTTTTCACCGGTTAGTTG+AGG + chr6_1:98870413-98870432 Msa0901870:intron 40.0%
TCTGAAGGATGAACGTAGTA+AGG + chr6_1:98870461-98870480 Msa0901870:intron 40.0%
AAGAGGAGAAGAGAAACAAG+AGG - chr6_1:98866181-98866200 None:intergenic 40.0%
CTTGGCTATACAATGTACCA+TGG + chr6_1:98871093-98871112 Msa0901870:CDS 40.0%
TGGCTATACAATGTACCATG+GGG + chr6_1:98871095-98871114 Msa0901870:CDS 40.0%
!! ACTGATTTGTATAAGCCCCA+TGG - chr6_1:98871113-98871132 None:intergenic 40.0%
!! GATGATGGAGCAAATGTGTT+TGG + chr6_1:98871414-98871433 Msa0901870:CDS 40.0%
ATGTGTTTGGATACCATGCT+TGG + chr6_1:98871427-98871446 Msa0901870:CDS 40.0%
TATCAAGCAATGACCAAGCA+TGG - chr6_1:98871443-98871462 None:intergenic 40.0%
TTAGGGTACACATCAAGGTT+TGG + chr6_1:98871477-98871496 Msa0901870:CDS 40.0%
CCAATATGCAGACATCTTAG+GGG - chr6_1:98871538-98871557 None:intergenic 40.0%
TGTGTTAGTGCTTCAATCAC+GGG - chr6_1:98871795-98871814 None:intergenic 40.0%
CTGTGTTAGTGCTTCAATCA+CGG - chr6_1:98871796-98871815 None:intergenic 40.0%
AGTGCCTGAAACAGTGCATT+TGG + chr6_1:98862270-98862289 Msa0901870:CDS 45.0%
ACAGTGCATTTGGATACTGG+AGG + chr6_1:98862280-98862299 Msa0901870:CDS 45.0%
CAGTGCATTTGGATACTGGA+GGG + chr6_1:98862281-98862300 Msa0901870:CDS 45.0%
GACCTTCTAAGTTTGTGGTC+AGG + chr6_1:98862727-98862746 Msa0901870:intron 45.0%
CTCCTGACCACAAACTTAGA+AGG - chr6_1:98862732-98862751 None:intergenic 45.0%
TGGACCATGAGATTGAGAAC+CGG - chr6_1:98863876-98863895 None:intergenic 45.0%
AGGAGTAATGCCTGCAACAT+AGG - chr6_1:98864163-98864182 None:intergenic 45.0%
ATGGAGACAGAGTGAAGAAC+TGG + chr6_1:98864436-98864455 Msa0901870:CDS 45.0%
TGGATGACCTTCAATGAACC+AGG + chr6_1:98864456-98864475 Msa0901870:CDS 45.0%
GCTTCTCTTGGCTATGACAA+TGG + chr6_1:98864486-98864505 Msa0901870:CDS 45.0%
ATGAAGCACAGATACGGACA+AGG - chr6_1:98865250-98865269 None:intergenic 45.0%
GGAGGAAGTGAAACTTGTGA+AGG + chr6_1:98865397-98865416 Msa0901870:CDS 45.0%
!! AAGGGCTCCATTGATTCTGT+TGG + chr6_1:98865416-98865435 Msa0901870:CDS 45.0%
CAAGCAAAACCAAAAGTCCC+TGG + chr6_1:98865479-98865498 Msa0901870:CDS 45.0%
!! GATTGATAGCCAGGGACTTT+TGG - chr6_1:98865491-98865510 None:intergenic 45.0%
TCCCTGGCTATCAATCAGAT+TGG + chr6_1:98865495-98865514 Msa0901870:CDS 45.0%
GATTGGAATGTAGGGTTTGC+TGG + chr6_1:98865512-98865531 Msa0901870:CDS 45.0%
! GAGAGCTTCAAGCTTTTCCA+TGG - chr6_1:98865960-98865979 None:intergenic 45.0%
TATCAACCTCCATCTTGTGG+GGG - chr6_1:98866216-98866235 None:intergenic 45.0%
ACGTTCATGAAACACTGGGT+TGG + chr6_1:98866404-98866423 Msa0901870:intron 45.0%
!! TGGGTTGGCTGAAATATGCA+AGG + chr6_1:98866419-98866438 Msa0901870:intron 45.0%
CTGCAACTCGTGAATTGCAA+TGG - chr6_1:98866518-98866537 None:intergenic 45.0%
TTGCAATTCACGAGTTGCAG+AGG + chr6_1:98866518-98866537 Msa0901870:intron 45.0%
! AGGGTTCAGTGATGCTGATT+GGG - chr6_1:98866676-98866695 None:intergenic 45.0%
TAGGGTTCAGTGATGCTGAT+TGG - chr6_1:98866677-98866696 None:intergenic 45.0%
AGCATATGCAATGTCAGGTC+TGG + chr6_1:98866830-98866849 Msa0901870:intron 45.0%
TCTCCCCACTAACCTTCTAT+AGG + chr6_1:98866872-98866891 Msa0901870:intron 45.0%
TGATGCTCCTAAATCAGGTC+AGG - chr6_1:98867342-98867361 None:intergenic 45.0%
!! GGAGTTGATGCTCCTAAATC+AGG - chr6_1:98867347-98867366 None:intergenic 45.0%
!! GTTTACATGAGAGTGCCACA+GGG - chr6_1:98867368-98867387 None:intergenic 45.0%
!! AGTTTACATGAGAGTGCCAC+AGG - chr6_1:98867369-98867388 None:intergenic 45.0%
CTCTAGCATCAATTCATGGG+TGG - chr6_1:98867448-98867467 None:intergenic 45.0%
!! CTGGCTCTAGCATCAATTCA+TGG - chr6_1:98867452-98867471 None:intergenic 45.0%
CATGAATTGATGCTAGAGCC+AGG + chr6_1:98867450-98867469 Msa0901870:intron 45.0%
! GTGTTGAAAGGTACAAAGCC+AGG - chr6_1:98867565-98867584 None:intergenic 45.0%
!! ATGCAGATGGGAGTGTTGAA+AGG - chr6_1:98867577-98867596 None:intergenic 45.0%
CCTCCAAATGCTGTTGCTAT+TGG - chr6_1:98867629-98867648 None:intergenic 45.0%
CCAATAGCAACAGCATTTGG+AGG + chr6_1:98867626-98867645 Msa0901870:intron 45.0%
TGTGACCTTCTAACAGGTGA+AGG + chr6_1:98867893-98867912 Msa0901870:intron 45.0%
! CAGTTGTGACTTGTCTGCTA+AGG - chr6_1:98868035-98868054 None:intergenic 45.0%
ACCCCAACAAAATGGAAGAG+TGG - chr6_1:98868485-98868504 None:intergenic 45.0%
!! GATTGGTTTGGCTGAAGAAG+TGG - chr6_1:98869064-98869083 None:intergenic 45.0%
!! GGATTTGAGGAGGATTGGTT+TGG - chr6_1:98869076-98869095 None:intergenic 45.0%
AGGACAAGAAGGATTTGAGG+AGG - chr6_1:98869086-98869105 None:intergenic 45.0%
! GTTGTGGAGGCATGTTACAA+AGG - chr6_1:98869249-98869268 None:intergenic 45.0%
GCCTCCACAACACTCTTATT+TGG + chr6_1:98869258-98869277 Msa0901870:intron 45.0%
CCCATCACACTTGTCATGAT+TGG - chr6_1:98869332-98869351 None:intergenic 45.0%
TAGCTGGATTGTTGACACAG+GGG - chr6_1:98869358-98869377 None:intergenic 45.0%
CTAGCTGGATTGTTGACACA+GGG - chr6_1:98869359-98869378 None:intergenic 45.0%
ACTAGCTGGATTGTTGACAC+AGG - chr6_1:98869360-98869379 None:intergenic 45.0%
GCCAATGCTAACTTTGCTGA+AGG - chr6_1:98869597-98869616 None:intergenic 45.0%
TTTCCTCTTCCTCTTCCTTG+AGG + chr6_1:98869723-98869742 Msa0901870:intron 45.0%
GGATATTCTCCTCAAGGAAG+AGG - chr6_1:98869735-98869754 None:intergenic 45.0%
GGTAGAGGATATTCTCCTCA+AGG - chr6_1:98869741-98869760 None:intergenic 45.0%
! GGTCTTGTGAATGCTATGGA+TGG - chr6_1:98869783-98869802 None:intergenic 45.0%
!! CTATGGTGTTGCAGCAAGAA+AGG - chr6_1:98869854-98869873 None:intergenic 45.0%
CCGGTGAAAACTATCACTCT+TGG - chr6_1:98870406-98870425 None:intergenic 45.0%
! GAGAGCTTCAAGCTTTTCCA+TGG - chr6_1:98865960-98865979 None:intergenic 45.0%
TATGTAGGCATGGATGATCC+TGG + chr6_1:98871306-98871325 Msa0901870:intron 45.0%
GGAGATTAGGGTACACATCA+AGG + chr6_1:98871472-98871491 Msa0901870:CDS 45.0%
CCCCTAAGATGTCTGCATAT+TGG + chr6_1:98871535-98871554 Msa0901870:CDS 45.0%
! AGAGGGTATGGCTAGCAAAG+AGG + chr6_1:98862366-98862385 Msa0901870:CDS 50.0%
! GAGGGTATGGCTAGCAAAGA+GGG + chr6_1:98862367-98862386 Msa0901870:CDS 50.0%
GTGGTCAGGAGCTCAATTAC+TGG + chr6_1:98862741-98862760 Msa0901870:intron 50.0%
CCAAGAGAAGCAACAACTCC+TGG - chr6_1:98864477-98864496 None:intergenic 50.0%
! CCAGGAGTTGTTGCTTCTCT+TGG + chr6_1:98864474-98864493 Msa0901870:CDS 50.0%
!! GACAATGGCTATTTTGCCCC+TGG + chr6_1:98864501-98864520 Msa0901870:CDS 50.0%
TATGATGCACGGACACTCCT+CGG + chr6_1:98865086-98865105 Msa0901870:intron 50.0%
ACGAGGACAAACCTAATCCG+AGG - chr6_1:98865106-98865125 None:intergenic 50.0%
GTCATTGTCTACGTCGTGTC+TGG + chr6_1:98865221-98865240 Msa0901870:intron 50.0%
CAAGGGGATGAATGAACCTG+TGG - chr6_1:98865313-98865332 None:intergenic 50.0%
! GCTAAGAATGGAGTGCCTGT+TGG + chr6_1:98865864-98865883 Msa0901870:CDS 50.0%
AATCACCATGGAAGCAGCCA+TGG + chr6_1:98865940-98865959 Msa0901870:intron 50.0%
! CTTTTCCATGGCTGCTTCCA+TGG - chr6_1:98865948-98865967 None:intergenic 50.0%
!! ATCTTGTGGGGGGGTATTAG+AGG - chr6_1:98866205-98866224 None:intergenic 50.0%
TCTAATACCCCCCCACAAGA+TGG + chr6_1:98866204-98866223 Msa0901870:intron 50.0%
ATCAACCTCCATCTTGTGGG+GGG - chr6_1:98866215-98866234 None:intergenic 50.0%
GTACGAGAAAAGCTGCAAGC+TGG - chr6_1:98866354-98866373 None:intergenic 50.0%
! TTCAGTGATGCTGATTGGGG+GGG - chr6_1:98866672-98866691 None:intergenic 50.0%
! GTTCAGTGATGCTGATTGGG+GGG - chr6_1:98866673-98866692 None:intergenic 50.0%
! GGTTCAGTGATGCTGATTGG+GGG - chr6_1:98866674-98866693 None:intergenic 50.0%
! GGGTTCAGTGATGCTGATTG+GGG - chr6_1:98866675-98866694 None:intergenic 50.0%
GAAAATAACAAGCCACGCCC+AGG + chr6_1:98866720-98866739 Msa0901870:intron 50.0%
GAAGTAGCACGTTCCTCCAA+AGG - chr6_1:98867038-98867057 None:intergenic 50.0%
TGCAGTAAAAGAGGAGGCAG+TGG + chr6_1:98867187-98867206 Msa0901870:intron 50.0%
!! TTAGGAGCATCAACTCCCTG+TGG + chr6_1:98867350-98867369 Msa0901870:intron 50.0%
TGGGTGGCATCTCCATCAAT+TGG - chr6_1:98867432-98867451 None:intergenic 50.0%
! GTCAACTATCAGGGTACTCC+TGG - chr6_1:98867471-98867490 None:intergenic 50.0%
AAGGTACAAAGCCAGGCTTG+TGG - chr6_1:98867558-98867577 None:intergenic 50.0%
! ACTGGTTCATTGGTGACAGC+AGG + chr6_1:98868007-98868026 Msa0901870:intron 50.0%
GGTTTGGCTGAAGAAGTGGA+TGG - chr6_1:98869060-98869079 None:intergenic 50.0%
TATCCTCCCAATTGGGGAAG+AGG - chr6_1:98869636-98869655 None:intergenic 50.0%
CATGGCTATCCTCCCAATTG+GGG - chr6_1:98869642-98869661 None:intergenic 50.0%
GCATGGCTATCCTCCCAATT+GGG - chr6_1:98869643-98869662 None:intergenic 50.0%
AGCATGGCTATCCTCCCAAT+TGG - chr6_1:98869644-98869663 None:intergenic 50.0%
TCTCCTCAAGGAAGAGGAAG+AGG - chr6_1:98869729-98869748 None:intergenic 50.0%
AGGCAATTTGGGAGAGGTAG+AGG - chr6_1:98869756-98869775 None:intergenic 50.0%
TACCTCTCCCAAATTGCCTC+TGG + chr6_1:98869757-98869776 Msa0901870:intron 50.0%
TGGATGGCCAGAGGCAATTT+GGG - chr6_1:98869767-98869786 None:intergenic 50.0%
ATGGATGGCCAGAGGCAATT+TGG - chr6_1:98869768-98869787 None:intergenic 50.0%
TGAATGCTATGGATGGCCAG+AGG - chr6_1:98869776-98869795 None:intergenic 50.0%
GGACAGGTACACTGTGACAT+AGG + chr6_1:98870029-98870048 Msa0901870:intron 50.0%
GGGAAGAGTTGGATCAGTTC+AGG - chr6_1:98870055-98870074 None:intergenic 50.0%
GAGAGGTTTGTGGGAAGAGT+TGG - chr6_1:98870066-98870085 None:intergenic 50.0%
TGCTATACGCAGCTTGGGAA+AGG - chr6_1:98870298-98870317 None:intergenic 50.0%
ACGGTTACGCCTCAACTAAC+CGG - chr6_1:98870425-98870444 None:intergenic 50.0%
AATCACCATGGAAGCAGCCA+TGG + chr6_1:98865940-98865959 Msa0901870:intron 50.0%
! CTTTTCCATGGCTGCTTCCA+TGG - chr6_1:98865948-98865967 None:intergenic 50.0%
ATGGCTAGCAAAGAGGGTCG+TGG + chr6_1:98862373-98862392 Msa0901870:CDS 55.0%
AGGGTCGTGGCCCTAGTATT+TGG + chr6_1:98862386-98862405 Msa0901870:CDS 55.0%
GGGTCGTGGCCCTAGTATTT+GGG + chr6_1:98862387-98862406 Msa0901870:CDS 55.0%
CTTGAATTCACACACGCGCG+CGG - chr6_1:98863795-98863814 None:intergenic 55.0%
CACGACACGTGTCTTACACG+AGG - chr6_1:98865123-98865142 None:intergenic 55.0%
!! TGTCGGTGTCGTGTCAGTGT+CGG - chr6_1:98865147-98865166 None:intergenic 55.0%
!! GGGGGGGTATTAGAGGAAAG+AGG - chr6_1:98866198-98866217 None:intergenic 55.0%
AATACCCCCCCACAAGATGG+AGG + chr6_1:98866207-98866226 Msa0901870:intron 55.0%
TCAACCTCCATCTTGTGGGG+GGG - chr6_1:98866214-98866233 None:intergenic 55.0%
CTCAAAAGATCACCTGGGCG+TGG - chr6_1:98866735-98866754 None:intergenic 55.0%
! CACGCCCAGGTGATCTTTTG+AGG + chr6_1:98866733-98866752 Msa0901870:intron 55.0%
!! GGATCAAGAGGAGTGCTTGC+AGG + chr6_1:98866945-98866964 Msa0901870:intron 55.0%
ATAACCCTGTGCCACAAGCC+TGG + chr6_1:98867544-98867563 Msa0901870:intron 55.0%
AAAGCCAGGCTTGTGGCACA+GGG - chr6_1:98867551-98867570 None:intergenic 55.0%
TCCTCCTCCTCTTCCCCAAT+TGG + chr6_1:98869626-98869645 Msa0901870:intron 55.0%
CCTCCTCCTCTTCCCCAATT+GGG + chr6_1:98869627-98869646 Msa0901870:intron 55.0%
GCACGGACACTCCTCGGATT+AGG + chr6_1:98865092-98865111 Msa0901870:intron 60.0%
CAAAGCCAGGCTTGTGGCAC+AGG - chr6_1:98867552-98867571 None:intergenic 60.0%
CCCAATTGGGGAAGAGGAGG+AGG - chr6_1:98869630-98869649 None:intergenic 60.0%
CCTCCCAATTGGGGAAGAGG+AGG - chr6_1:98869633-98869652 None:intergenic 60.0%
CCTCCTCTTCCCCAATTGGG+AGG + chr6_1:98869630-98869649 Msa0901870:intron 60.0%
GGCCAGAGGCAATTTGGGAG+AGG - chr6_1:98869762-98869781 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 98862105 98871821 98862105 ID=Msa0901870;Name=Msa0901870
chr6_1 mRNA 98862105 98871821 98862105 ID=Msa0901870-mRNA-1;Parent=Msa0901870;Name=Msa0901870-mRNA-1;_AED=0.10;_eAED=0.10;_QI=73|1|1|1|0.72|0.58|12|204|514
chr6_1 exon 98862105 98862430 98862105 ID=Msa0901870-mRNA-1:exon:17469;Parent=Msa0901870-mRNA-1
chr6_1 exon 98863578 98863636 98863578 ID=Msa0901870-mRNA-1:exon:17470;Parent=Msa0901870-mRNA-1
chr6_1 exon 98863832 98863907 98863832 ID=Msa0901870-mRNA-1:exon:17471;Parent=Msa0901870-mRNA-1
chr6_1 exon 98863995 98864066 98863995 ID=Msa0901870-mRNA-1:exon:17472;Parent=Msa0901870-mRNA-1
chr6_1 exon 98864172 98864259 98864172 ID=Msa0901870-mRNA-1:exon:17473;Parent=Msa0901870-mRNA-1
chr6_1 exon 98864395 98864647 98864395 ID=Msa0901870-mRNA-1:exon:17474;Parent=Msa0901870-mRNA-1
chr6_1 exon 98864884 98864999 98864884 ID=Msa0901870-mRNA-1:exon:17475;Parent=Msa0901870-mRNA-1
chr6_1 exon 98865316 98865533 98865316 ID=Msa0901870-mRNA-1:exon:17476;Parent=Msa0901870-mRNA-1
chr6_1 exon 98865862 98865893 98865862 ID=Msa0901870-mRNA-1:exon:17477;Parent=Msa0901870-mRNA-1
chr6_1 exon 98871083 98871185 98871083 ID=Msa0901870-mRNA-1:exon:17478;Parent=Msa0901870-mRNA-1
chr6_1 exon 98871313 98871600 98871313 ID=Msa0901870-mRNA-1:exon:17479;Parent=Msa0901870-mRNA-1
chr6_1 exon 98871631 98871821 98871631 ID=Msa0901870-mRNA-1:exon:17480;Parent=Msa0901870-mRNA-1
chr6_1 five_prime_UTR 98862105 98862177 98862105 ID=Msa0901870-mRNA-1:five_prime_utr;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98862178 98862430 98862178 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98863578 98863636 98863578 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98863832 98863907 98863832 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98863995 98864066 98863995 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98864172 98864259 98864172 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98864395 98864647 98864395 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98864884 98864999 98864884 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98865316 98865533 98865316 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98865862 98865893 98865862 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98871083 98871185 98871083 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 CDS 98871313 98871587 98871313 ID=Msa0901870-mRNA-1:cds;Parent=Msa0901870-mRNA-1
chr6_1 three_prime_UTR 98871588 98871600 98871588 ID=Msa0901870-mRNA-1:three_prime_utr;Parent=Msa0901870-mRNA-1
chr6_1 three_prime_UTR 98871631 98871821 98871631 ID=Msa0901870-mRNA-1:three_prime_utr;Parent=Msa0901870-mRNA-1
Gene Sequence

>Msa0901870

ATGGTGATGTTGGATTCACAACAGCATCAATGTTTCTATTACATGTTTTTCTTCTACTTAGTTGTTCTTGTTAGTTCAGTTAATGGGGTTACAGTGCCTGAAACAGTGCATTTGGATACTGGAGGGTTGAGTAGAGATGTTTTTCCTAAAGGGTTTGTGTTTGGAGTTGCAACTTCTGCTTATCAAGTAGAGGGTATGGCTAGCAAAGAGGGTCGTGGCCCTAGTATTTGGGATGTTTTCATCAAAAAACCTGGGATTGTCGCAAATAATGGCACAGGAGAAGTTTCTGTTGATCAATATCATCGCTACAAAGAAGATATAGATCTCATGGCAAAGCTAAATTTTGATCAATACCGGTTCTCAATCTCATGGTCCAGAATTTTTCCAAATGGAACTGGCAAAGTAAATTGGAAAGGTGTTGCATACTACAACAGATTGATCGATTACTTACTAGAAAAGGGCATTACTCCTTATGCAAATCTCTACCATTATGACCTTCCTTTAGCTCTTGAGTTGAAATACAATGGTTTATTGAGCCGTAACGTTGTGAAAGATTTTGCGGATTATGCAGATTTTTGTTTCAAGACATATGGAGACAGAGTGAAGAACTGGATGACCTTCAATGAACCAGGAGTTGTTGCTTCTCTTGGCTATGACAATGGCTATTTTGCCCCTGGAAGATGTTCAAAAGAATATGGAAATTGTACAGCTGGAAATTCAGGAACTGAGCCTTATACTGTAGCTCACAATTTGATATTGTCACATGCTGCTGCTGTTCAAAGATATAGAGAGAAATACCAGGAAAAGCAAAAGGGTAGGATTGGAATTTTGTTGGATTTTGTTTGGTATGAGCCTCTTACAAGATCAAAGGCTGATAACTATGCTGCTCAAAGAGCTAGAGACTTTAATATTGGATGGTTCATTCATCCCCTTGTTTATGGTGAGTATCCAAGAACTATGCAAAATATTGTTGGGAACAGACTCCCAAAGTTTACTAAGGAGGAAGTGAAACTTGTGAAGGGCTCCATTGATTCTGTTGGTATCAATCATTATACTACTTATTACACGTTTGATCCTCATCAAGCAAAACCAAAAGTCCCTGGCTATCAATCAGATTGGAATGTAGGGTTTGCTGATGCTAAGAATGGAGTGCCTGTTGGACCAAGAGCATATTCATCTTGGCTATACAATGTACCATGGGGCTTATACAAATCAGTAATGTACATCAAGGAGCATTATAAAAACCCACCTATGTACTTATCTGAAAATGGCATGGATGATCCTGGTAATGTAACATTTTCAAAGGGTTTGCATGACACAACAAGAATAAACTATTACAAAGGCTATTTGACTCAACTAAAGAAAGCTATAGATGATGGAGCAAATGTGTTTGGATACCATGCTTGGTCATTGCTTGATAACTTTGAATGGAGATTAGGGTACACATCAAGGTTTGGTATTGTCTATGTTGACTTCAAAACTCTCAAGAGAACCCCTAAGATGTCTGCATATTGGTTCAAGCAGCTACTTACCAAAAAGAAGTAA
Protein sequence

>Msa0901870

MVMLDSQQHQCFYYMFFFYLVVLVSSVNGVTVPETVHLDTGGLSRDVFPKGFVFGVATSAYQVEGMASKEGRGPSIWDVFIKKPGIVANNGTGEVSVDQYHRYKEDIDLMAKLNFDQYRFSISWSRIFPNGTGKVNWKGVAYYNRLIDYLLEKGITPYANLYHYDLPLALELKYNGLLSRNVVKDFADYADFCFKTYGDRVKNWMTFNEPGVVASLGYDNGYFAPGRCSKEYGNCTAGNSGTEPYTVAHNLILSHAAAVQRYREKYQEKQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFNIGWFIHPLVYGEYPRTMQNIVGNRLPKFTKEEVKLVKGSIDSVGINHYTTYYTFDPHQAKPKVPGYQSDWNVGFADAKNGVPVGPRAYSSWLYNVPWGLYKSVMYIKEHYKNPPMYLSENGMDDPGNVTFSKGLHDTTRINYYKGYLTQLKKAIDDGANVFGYHAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRTPKMSAYWFKQLLTKKK*