Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997290 | XP_013442682.1 | 94.358 | 514 | 14 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997290 | sp|Q9LV33|BGL44_ARATH | 77.096 | 489 | 96 | 2 | 25 | 497 | 21 | 509 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997290 | A0A072TH37 | 94.358 | 514 | 14 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1006 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028410 | Msa0997290 | 0.813008 | 3.180306e-51 | -8.615850e-47 |
| Msa0089410 | Msa0997290 | 0.805770 | 1.136836e-49 | -8.615850e-47 |
| Msa0621870 | Msa0997290 | 0.824676 | 7.094337e-54 | -8.615850e-47 |
| Msa0669710 | Msa0997290 | 0.821094 | 4.846697e-53 | -8.615850e-47 |
| Msa0669750 | Msa0997290 | 0.818917 | 1.525970e-52 | -8.615850e-47 |
| Msa0693150 | Msa0997290 | 0.800273 | 1.556973e-48 | -8.615850e-47 |
| Msa0124070 | Msa0997290 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0398990 | Msa0997290 | 0.804077 | 2.567895e-49 | -8.615850e-47 |
| Msa0409300 | Msa0997290 | -0.808060 | 3.728274e-50 | -8.615850e-47 |
| Msa0457750 | Msa0997290 | 0.800394 | 1.471458e-48 | -8.615850e-47 |
| Msa0997290 | Msa1016150 | 0.809948 | 1.469723e-50 | -8.615850e-47 |
| Msa0997290 | Msa1041620 | 0.803112 | 4.072841e-49 | -8.615850e-47 |
| Msa0997290 | Msa1057300 | 0.816654 | 4.946269e-52 | -8.615850e-47 |
| Msa0997290 | Msa1103620 | 0.838802 | 2.315898e-57 | -8.615850e-47 |
| Msa0997290 | Msa1166520 | 0.806011 | 1.011878e-49 | -8.615850e-47 |
| Msa0997290 | Msa1179610 | 0.800138 | 1.658669e-48 | -8.615850e-47 |
| Msa0997290 | Msa1265990 | 0.807979 | 3.878498e-50 | -8.615850e-47 |
| Msa0997290 | Msa1423660 | -0.819016 | 1.448994e-52 | -8.615850e-47 |
| Msa0997290 | Msa1427260 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0895850 | Msa0997290 | 0.813755 | 2.180107e-51 | -8.615850e-47 |
| Msa0901860 | Msa0997290 | 0.931807 | 2.186449e-94 | -8.615850e-47 |
| Msa0901870 | Msa0997290 | 0.808640 | 2.804622e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997290 | MtrunA17_Chr6g0482941 | 94.358 | 514 | 14 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1006 |
| Msa0997290 | MtrunA17_Chr6g0482951 | 91.829 | 514 | 27 | 1 | 1 | 499 | 1 | 514 | 0.0 | 983 |
| Msa0997290 | MtrunA17_Chr4g0043091 | 51.200 | 500 | 223 | 5 | 21 | 499 | 6 | 505 | 7.27e-179 | 511 |
| Msa0997290 | MtrunA17_Chr4g0033271 | 49.109 | 505 | 234 | 8 | 15 | 497 | 8 | 511 | 1.33e-167 | 483 |
| Msa0997290 | MtrunA17_Chr6g0482081 | 50.593 | 506 | 220 | 9 | 21 | 498 | 11 | 514 | 5.01e-167 | 482 |
| Msa0997290 | MtrunA17_Chr4g0042171 | 50.737 | 475 | 212 | 5 | 43 | 495 | 24 | 498 | 7.06e-167 | 481 |
| Msa0997290 | MtrunA17_Chr3g0090131 | 51.059 | 472 | 202 | 7 | 43 | 495 | 21 | 482 | 4.25e-166 | 478 |
| Msa0997290 | MtrunA17_Chr6g0482131 | 50.209 | 478 | 216 | 6 | 43 | 498 | 36 | 513 | 5.36e-166 | 479 |
| Msa0997290 | MtrunA17_Chr4g0033201 | 48.521 | 507 | 235 | 9 | 14 | 497 | 9 | 512 | 2.79e-165 | 477 |
| Msa0997290 | MtrunA17_Chr6g0482071 | 47.665 | 514 | 242 | 8 | 10 | 499 | 5 | 515 | 1.89e-164 | 475 |
| Msa0997290 | MtrunA17_Chr3g0090111 | 50.743 | 471 | 204 | 7 | 43 | 495 | 19 | 479 | 2.20e-164 | 474 |
| Msa0997290 | MtrunA17_Chr3g0087261 | 48.214 | 504 | 241 | 5 | 15 | 499 | 9 | 511 | 2.39e-163 | 472 |
| Msa0997290 | MtrunA17_Chr4g0033401 | 48.228 | 508 | 238 | 8 | 13 | 496 | 3 | 509 | 3.19e-163 | 472 |
| Msa0997290 | MtrunA17_Chr4g0033331 | 49.287 | 491 | 225 | 7 | 29 | 496 | 25 | 514 | 5.89e-162 | 469 |
| Msa0997290 | MtrunA17_Chr4g0033311 | 47.255 | 510 | 243 | 7 | 15 | 498 | 7 | 516 | 7.76e-162 | 469 |
| Msa0997290 | MtrunA17_Chr2g0329191 | 48.857 | 481 | 225 | 6 | 38 | 497 | 29 | 509 | 1.72e-161 | 468 |
| Msa0997290 | MtrunA17_Chr4g0033321 | 47.451 | 510 | 242 | 9 | 13 | 498 | 3 | 510 | 6.72e-161 | 466 |
| Msa0997290 | MtrunA17_Chr3g0087271 | 48.521 | 507 | 240 | 7 | 13 | 499 | 7 | 512 | 1.78e-160 | 465 |
| Msa0997290 | MtrunA17_Chr2g0329201 | 47.151 | 509 | 243 | 7 | 11 | 497 | 3 | 507 | 4.58e-160 | 464 |
| Msa0997290 | MtrunA17_Chr3g0088441 | 45.809 | 513 | 252 | 7 | 12 | 498 | 3 | 515 | 2.54e-156 | 455 |
| Msa0997290 | MtrunA17_Chr4g0033191 | 47.976 | 494 | 232 | 9 | 28 | 497 | 27 | 519 | 7.27e-156 | 454 |
| Msa0997290 | MtrunA17_Chr4g0074561 | 46.947 | 475 | 229 | 6 | 48 | 499 | 40 | 514 | 4.72e-155 | 452 |
| Msa0997290 | MtrunA17_Chr4g0033341 | 47.070 | 512 | 242 | 10 | 11 | 497 | 36 | 543 | 1.25e-153 | 449 |
| Msa0997290 | MtrunA17_Chr2g0317841 | 45.219 | 502 | 246 | 5 | 13 | 495 | 12 | 503 | 4.06e-152 | 444 |
| Msa0997290 | MtrunA17_Chr2g0317821 | 45.418 | 502 | 245 | 5 | 13 | 495 | 12 | 503 | 7.96e-152 | 443 |
| Msa0997290 | MtrunA17_Chr2g0288071 | 46.199 | 513 | 241 | 9 | 12 | 499 | 42 | 544 | 1.47e-151 | 444 |
| Msa0997290 | MtrunA17_Chr4g0074551 | 46.300 | 473 | 232 | 5 | 48 | 499 | 55 | 526 | 5.53e-150 | 440 |
| Msa0997290 | MtrunA17_Chr2g0288021 | 45.283 | 477 | 241 | 5 | 43 | 499 | 35 | 511 | 7.96e-150 | 438 |
| Msa0997290 | MtrunA17_Chr4g0010501 | 47.569 | 473 | 228 | 6 | 43 | 497 | 24 | 494 | 1.64e-148 | 434 |
| Msa0997290 | MtrunA17_Chr2g0329321 | 44.380 | 516 | 239 | 7 | 2 | 497 | 1 | 488 | 1.66e-148 | 434 |
| Msa0997290 | MtrunA17_Chr4g0033261 | 44.141 | 512 | 235 | 8 | 13 | 498 | 8 | 494 | 7.53e-146 | 427 |
| Msa0997290 | MtrunA17_Chr5g0430451 | 44.380 | 516 | 231 | 8 | 14 | 497 | 7 | 498 | 1.98e-139 | 410 |
| Msa0997290 | MtrunA17_Chr4g0006971 | 43.949 | 471 | 246 | 5 | 42 | 498 | 26 | 492 | 1.66e-138 | 409 |
| Msa0997290 | MtrunA17_Chr1g0195611 | 43.590 | 507 | 255 | 8 | 7 | 499 | 2 | 491 | 8.95e-138 | 407 |
| Msa0997290 | MtrunA17_Chr7g0242681 | 45.551 | 472 | 236 | 7 | 42 | 498 | 37 | 502 | 2.06e-137 | 407 |
| Msa0997290 | MtrunA17_Chr4g0033231 | 42.285 | 499 | 239 | 8 | 22 | 497 | 21 | 493 | 4.68e-136 | 402 |
| Msa0997290 | MtrunA17_Chr5g0428831 | 42.942 | 503 | 257 | 8 | 7 | 495 | 2 | 488 | 2.77e-135 | 400 |
| Msa0997290 | MtrunA17_Chr7g0242691 | 43.856 | 472 | 245 | 7 | 42 | 498 | 30 | 496 | 1.70e-132 | 394 |
| Msa0997290 | MtrunA17_Chr4g0006111 | 42.629 | 502 | 232 | 9 | 29 | 499 | 51 | 527 | 2.30e-132 | 394 |
| Msa0997290 | MtrunA17_Chr4g0006131 | 41.211 | 512 | 236 | 10 | 22 | 499 | 23 | 503 | 1.98e-124 | 372 |
| Msa0997290 | MtrunA17_Chr5g0418871 | 58.362 | 293 | 121 | 1 | 64 | 355 | 4 | 296 | 6.99e-123 | 362 |
| Msa0997290 | MtrunA17_Chr1g0195641 | 45.692 | 383 | 194 | 4 | 40 | 410 | 24 | 404 | 2.74e-112 | 338 |
| Msa0997290 | MtrunA17_Chr7g0234091 | 40.381 | 473 | 248 | 10 | 44 | 497 | 76 | 533 | 2.73e-110 | 337 |
| Msa0997290 | MtrunA17_Chr7g0234111 | 39.706 | 476 | 245 | 11 | 44 | 496 | 76 | 532 | 2.49e-105 | 325 |
| Msa0997290 | MtrunA17_Chr7g0234131 | 38.819 | 474 | 253 | 10 | 44 | 496 | 76 | 533 | 2.67e-105 | 325 |
| Msa0997290 | MtrunA17_Chr2g0301231 | 40.670 | 418 | 192 | 8 | 110 | 497 | 1 | 392 | 1.86e-95 | 294 |
| Msa0997290 | MtrunA17_Chr3g0087201 | 47.866 | 328 | 153 | 5 | 184 | 495 | 17 | 342 | 3.84e-92 | 284 |
| Msa0997290 | MtrunA17_Chr7g0230651 | 40.166 | 361 | 192 | 5 | 97 | 443 | 26 | 376 | 1.29e-88 | 276 |
| Msa0997290 | MtrunA17_Chr7g0227561 | 38.433 | 268 | 128 | 6 | 45 | 308 | 48 | 282 | 1.33e-56 | 190 |
| Msa0997290 | MtrunA17_Chr7g0236731 | 42.918 | 233 | 126 | 4 | 133 | 363 | 32 | 259 | 2.21e-53 | 181 |
| Msa0997290 | MtrunA17_Chr3g0087191 | 53.741 | 147 | 65 | 2 | 40 | 183 | 19 | 165 | 2.72e-47 | 161 |
| Msa0997290 | MtrunA17_Chr8g0352881 | 46.739 | 92 | 49 | 0 | 265 | 356 | 57 | 148 | 2.13e-21 | 90.9 |
| Msa0997290 | MtrunA17_Chr5g0418861 | 46.154 | 91 | 45 | 3 | 410 | 496 | 1 | 91 | 2.31e-20 | 85.9 |
| Msa0997290 | MtrunA17_Chr4g0068871 | 25.000 | 412 | 245 | 13 | 102 | 499 | 175 | 536 | 1.75e-19 | 91.7 |
| Msa0997290 | MtrunA17_Chr2g0288031 | 54.237 | 59 | 27 | 0 | 193 | 251 | 5 | 63 | 4.65e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0997290 | AT3G18080.1 | 77.096 | 489 | 96 | 2 | 25 | 497 | 21 | 509 | 0.0 | 786 |
| Msa0997290 | AT3G18070.3 | 71.197 | 493 | 116 | 4 | 25 | 499 | 10 | 494 | 0.0 | 733 |
| Msa0997290 | AT3G18070.1 | 70.994 | 493 | 123 | 4 | 25 | 499 | 10 | 500 | 0.0 | 731 |
| Msa0997290 | AT3G18070.4 | 73.371 | 353 | 89 | 3 | 25 | 374 | 10 | 360 | 0.0 | 546 |
| Msa0997290 | AT3G18070.2 | 72.121 | 330 | 76 | 2 | 186 | 499 | 94 | 423 | 5.33e-177 | 504 |
| Msa0997290 | AT3G18070.2 | 60.976 | 82 | 30 | 1 | 25 | 104 | 10 | 91 | 1.26e-24 | 106 |
| Msa0997290 | AT3G18070.7 | 73.312 | 311 | 67 | 2 | 205 | 499 | 1 | 311 | 3.77e-170 | 482 |
| Msa0997290 | AT1G26560.1 | 50.105 | 475 | 215 | 6 | 43 | 495 | 32 | 506 | 8.42e-167 | 481 |
| Msa0997290 | AT5G54570.1 | 51.452 | 482 | 211 | 6 | 37 | 495 | 24 | 505 | 2.52e-166 | 481 |
| Msa0997290 | AT5G44640.1 | 47.929 | 507 | 238 | 8 | 13 | 499 | 5 | 505 | 7.85e-156 | 453 |
| Msa0997290 | AT2G44450.1 | 50.208 | 480 | 216 | 7 | 40 | 499 | 28 | 504 | 2.31e-154 | 449 |
| Msa0997290 | AT1G02850.2 | 48.180 | 467 | 219 | 7 | 44 | 495 | 27 | 485 | 9.89e-153 | 445 |
| Msa0997290 | AT1G61820.1 | 47.992 | 473 | 222 | 7 | 48 | 497 | 35 | 506 | 4.00e-151 | 441 |
| Msa0997290 | AT5G42260.1 | 47.809 | 502 | 236 | 9 | 10 | 491 | 2 | 497 | 1.42e-150 | 440 |
| Msa0997290 | AT2G25630.1 | 47.368 | 494 | 239 | 9 | 16 | 499 | 5 | 487 | 2.72e-149 | 436 |
| Msa0997290 | AT2G44480.1 | 45.979 | 485 | 240 | 6 | 33 | 496 | 26 | 509 | 2.92e-149 | 437 |
| Msa0997290 | AT2G44480.3 | 45.979 | 485 | 240 | 6 | 33 | 496 | 57 | 540 | 9.45e-149 | 437 |
| Msa0997290 | AT5G36890.2 | 45.885 | 486 | 227 | 7 | 30 | 495 | 10 | 479 | 1.71e-148 | 434 |
| Msa0997290 | AT5G36890.1 | 45.885 | 486 | 227 | 7 | 30 | 495 | 10 | 479 | 1.92e-148 | 434 |
| Msa0997290 | AT4G21760.1 | 45.870 | 460 | 238 | 4 | 48 | 499 | 59 | 515 | 2.10e-148 | 435 |
| Msa0997290 | AT1G02850.5 | 46.122 | 490 | 218 | 8 | 44 | 495 | 27 | 508 | 3.36e-148 | 434 |
| Msa0997290 | AT4G21760.2 | 45.106 | 470 | 237 | 4 | 48 | 499 | 59 | 525 | 4.19e-148 | 435 |
| Msa0997290 | AT1G02850.4 | 46.029 | 491 | 218 | 9 | 44 | 495 | 27 | 509 | 1.29e-146 | 430 |
| Msa0997290 | AT5G54570.3 | 50.585 | 427 | 190 | 4 | 37 | 442 | 24 | 450 | 2.80e-145 | 424 |
| Msa0997290 | AT1G02850.1 | 46.039 | 467 | 202 | 8 | 44 | 495 | 27 | 458 | 1.84e-142 | 418 |
| Msa0997290 | AT5G24550.1 | 44.048 | 504 | 257 | 7 | 19 | 497 | 8 | 511 | 2.60e-142 | 420 |
| Msa0997290 | AT3G60130.1 | 46.947 | 475 | 226 | 8 | 43 | 495 | 30 | 500 | 5.61e-142 | 418 |
| Msa0997290 | AT4G27830.1 | 42.800 | 500 | 252 | 9 | 12 | 495 | 3 | 484 | 4.93e-141 | 416 |
| Msa0997290 | AT1G61810.1 | 45.339 | 472 | 236 | 6 | 48 | 497 | 38 | 509 | 5.29e-141 | 416 |
| Msa0997290 | AT5G54570.2 | 51.716 | 408 | 175 | 5 | 110 | 495 | 1 | 408 | 4.61e-138 | 405 |
| Msa0997290 | AT3G60140.1 | 43.366 | 505 | 255 | 9 | 17 | 497 | 7 | 504 | 2.45e-137 | 409 |
| Msa0997290 | AT1G61810.3 | 45.415 | 458 | 228 | 6 | 48 | 483 | 38 | 495 | 7.54e-136 | 404 |
| Msa0997290 | AT2G44470.3 | 42.717 | 508 | 261 | 10 | 15 | 497 | 5 | 507 | 2.12e-135 | 404 |
| Msa0997290 | AT1G60090.2 | 43.041 | 467 | 244 | 6 | 43 | 495 | 24 | 482 | 3.00e-135 | 400 |
| Msa0997290 | AT5G24540.1 | 44.643 | 504 | 254 | 7 | 19 | 497 | 8 | 511 | 4.86e-135 | 401 |
| Msa0997290 | AT2G44460.1 | 45.490 | 510 | 247 | 11 | 15 | 498 | 3 | 507 | 8.61e-135 | 402 |
| Msa0997290 | AT4G27820.1 | 44.989 | 469 | 235 | 7 | 42 | 495 | 22 | 482 | 1.05e-134 | 399 |
| Msa0997290 | AT1G60090.1 | 42.463 | 471 | 248 | 6 | 43 | 495 | 24 | 489 | 1.92e-134 | 399 |
| Msa0997290 | AT1G51470.1 | 44.239 | 486 | 240 | 11 | 34 | 497 | 35 | 511 | 1.11e-131 | 392 |
| Msa0997290 | AT1G47600.2 | 44.306 | 483 | 243 | 12 | 34 | 497 | 35 | 510 | 2.14e-130 | 388 |
| Msa0997290 | AT4G22100.1 | 41.845 | 466 | 249 | 7 | 45 | 495 | 24 | 482 | 2.29e-130 | 388 |
| Msa0997290 | AT1G47600.1 | 44.215 | 484 | 243 | 12 | 34 | 497 | 35 | 511 | 5.85e-130 | 387 |
| Msa0997290 | AT1G45191.4 | 41.901 | 463 | 255 | 5 | 44 | 498 | 30 | 486 | 8.72e-129 | 384 |
| Msa0997290 | AT1G75940.1 | 44.444 | 486 | 232 | 12 | 43 | 495 | 37 | 517 | 2.44e-128 | 384 |
| Msa0997290 | AT2G44490.1 | 42.678 | 478 | 246 | 10 | 45 | 495 | 16 | 492 | 7.49e-128 | 384 |
| Msa0997290 | AT3G62750.1 | 42.116 | 482 | 243 | 9 | 30 | 495 | 12 | 473 | 2.26e-127 | 380 |
| Msa0997290 | AT3G62750.2 | 42.116 | 482 | 243 | 9 | 30 | 495 | 38 | 499 | 6.75e-127 | 380 |
| Msa0997290 | AT1G66280.1 | 42.270 | 511 | 266 | 11 | 10 | 495 | 4 | 510 | 1.69e-126 | 379 |
| Msa0997290 | AT3G21370.1 | 43.711 | 485 | 241 | 12 | 40 | 495 | 30 | 511 | 3.39e-126 | 378 |
| Msa0997290 | AT3G09260.1 | 41.235 | 502 | 265 | 10 | 20 | 497 | 17 | 512 | 1.50e-125 | 376 |
| Msa0997290 | AT2G44480.2 | 46.192 | 407 | 199 | 4 | 110 | 496 | 1 | 407 | 1.53e-125 | 372 |
| Msa0997290 | AT3G60120.1 | 42.742 | 496 | 251 | 11 | 30 | 497 | 1 | 491 | 5.81e-125 | 375 |
| Msa0997290 | AT1G45191.2 | 40.938 | 469 | 257 | 6 | 44 | 498 | 30 | 492 | 1.09e-124 | 374 |
| Msa0997290 | AT5G26000.1 | 44.304 | 474 | 233 | 9 | 48 | 495 | 43 | 511 | 1.53e-124 | 374 |
| Msa0997290 | AT1G45191.6 | 40.717 | 474 | 256 | 6 | 44 | 498 | 30 | 497 | 2.37e-124 | 373 |
| Msa0997290 | AT5G28510.1 | 41.176 | 510 | 270 | 11 | 17 | 497 | 13 | 521 | 4.12e-124 | 373 |
| Msa0997290 | AT1G02850.3 | 47.015 | 402 | 173 | 6 | 44 | 409 | 27 | 424 | 7.51e-124 | 369 |
| Msa0997290 | AT3G18070.5 | 71.369 | 241 | 53 | 2 | 186 | 410 | 94 | 334 | 2.25e-123 | 364 |
| Msa0997290 | AT3G18070.5 | 60.976 | 82 | 30 | 1 | 25 | 104 | 10 | 91 | 4.94e-25 | 106 |
| Msa0997290 | AT1G45191.1 | 40.249 | 482 | 259 | 6 | 44 | 498 | 30 | 509 | 5.32e-123 | 370 |
| Msa0997290 | AT1G66270.1 | 42.191 | 493 | 257 | 10 | 30 | 497 | 23 | 512 | 4.92e-122 | 367 |
| Msa0997290 | AT3G03640.1 | 41.292 | 511 | 262 | 13 | 18 | 497 | 11 | 514 | 9.37e-122 | 367 |
| Msa0997290 | AT2G32860.2 | 42.348 | 477 | 250 | 8 | 48 | 499 | 99 | 575 | 1.88e-121 | 369 |
| Msa0997290 | AT2G32860.1 | 42.857 | 476 | 248 | 10 | 48 | 499 | 99 | 574 | 9.92e-121 | 367 |
| Msa0997290 | AT1G61810.5 | 45.232 | 409 | 203 | 5 | 110 | 497 | 1 | 409 | 2.16e-120 | 360 |
| Msa0997290 | AT1G52400.3 | 43.568 | 482 | 238 | 14 | 43 | 495 | 39 | 515 | 2.54e-120 | 363 |
| Msa0997290 | AT1G52400.1 | 43.568 | 482 | 238 | 14 | 43 | 495 | 39 | 515 | 2.54e-120 | 363 |
| Msa0997290 | AT1G66270.2 | 41.785 | 493 | 257 | 11 | 30 | 497 | 23 | 510 | 1.51e-118 | 358 |
| Msa0997290 | AT3G60130.2 | 46.005 | 413 | 198 | 7 | 104 | 495 | 40 | 448 | 1.97e-118 | 356 |
| Msa0997290 | AT3G60130.3 | 46.269 | 402 | 202 | 7 | 104 | 495 | 40 | 437 | 2.08e-117 | 353 |
| Msa0997290 | AT3G18070.6 | 72.973 | 222 | 44 | 2 | 205 | 410 | 1 | 222 | 4.12e-116 | 342 |
| Msa0997290 | AT3G62740.1 | 38.843 | 484 | 261 | 9 | 30 | 495 | 12 | 478 | 6.34e-116 | 351 |
| Msa0997290 | AT5G25980.2 | 38.710 | 527 | 278 | 13 | 8 | 495 | 2 | 522 | 1.96e-115 | 351 |
| Msa0997290 | AT4G27830.2 | 44.030 | 402 | 203 | 7 | 110 | 495 | 1 | 396 | 7.48e-115 | 345 |
| Msa0997290 | AT5G24540.2 | 43.177 | 447 | 231 | 5 | 19 | 442 | 8 | 454 | 1.53e-113 | 343 |
| Msa0997290 | AT2G44470.1 | 40.798 | 451 | 239 | 8 | 15 | 442 | 5 | 450 | 7.30e-113 | 341 |
| Msa0997290 | AT1G61820.3 | 47.397 | 365 | 170 | 5 | 154 | 497 | 4 | 367 | 2.59e-110 | 332 |
| Msa0997290 | AT1G60270.1 | 46.629 | 356 | 175 | 5 | 43 | 387 | 24 | 375 | 1.00e-109 | 331 |
| Msa0997290 | AT4G27820.2 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.00e-109 | 332 |
| Msa0997290 | AT4G27820.3 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.00e-109 | 332 |
| Msa0997290 | AT5G26000.2 | 44.258 | 418 | 205 | 7 | 48 | 442 | 43 | 455 | 1.71e-109 | 333 |
| Msa0997290 | AT3G62750.4 | 41.628 | 430 | 217 | 8 | 30 | 445 | 38 | 447 | 3.03e-109 | 332 |
| Msa0997290 | AT2G44480.4 | 50.467 | 321 | 154 | 4 | 33 | 350 | 57 | 375 | 3.58e-109 | 330 |
| Msa0997290 | AT1G61810.4 | 43.979 | 382 | 194 | 5 | 48 | 409 | 38 | 419 | 4.22e-109 | 331 |
| Msa0997290 | AT3G60140.2 | 41.646 | 413 | 214 | 6 | 17 | 409 | 7 | 412 | 2.21e-107 | 328 |
| Msa0997290 | AT2G44450.2 | 49.157 | 356 | 161 | 5 | 161 | 499 | 1 | 353 | 2.44e-106 | 321 |
| Msa0997290 | AT3G62750.6 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 8.13e-104 | 317 |
| Msa0997290 | AT3G62750.5 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 8.13e-104 | 317 |
| Msa0997290 | AT3G62740.2 | 39.161 | 429 | 228 | 8 | 30 | 442 | 12 | 423 | 1.89e-102 | 314 |
| Msa0997290 | AT1G45191.5 | 44.713 | 331 | 177 | 2 | 44 | 372 | 30 | 356 | 3.09e-102 | 313 |
| Msa0997290 | AT1G45191.3 | 44.713 | 331 | 177 | 2 | 44 | 372 | 30 | 356 | 3.81e-102 | 313 |
| Msa0997290 | AT1G52400.2 | 42.857 | 427 | 212 | 12 | 43 | 442 | 39 | 460 | 1.56e-101 | 313 |
| Msa0997290 | AT5G25980.3 | 37.792 | 471 | 251 | 11 | 8 | 442 | 2 | 466 | 5.67e-101 | 311 |
| Msa0997290 | AT5G25980.1 | 37.792 | 471 | 251 | 11 | 8 | 442 | 2 | 466 | 5.67e-101 | 311 |
| Msa0997290 | AT2G44470.2 | 43.251 | 363 | 196 | 6 | 15 | 372 | 5 | 362 | 2.04e-100 | 308 |
| Msa0997290 | AT3G62750.7 | 45.260 | 327 | 165 | 3 | 30 | 356 | 12 | 324 | 5.07e-98 | 300 |
| Msa0997290 | AT3G62750.8 | 45.260 | 327 | 165 | 3 | 30 | 356 | 12 | 324 | 5.07e-98 | 300 |
| Msa0997290 | AT3G62750.3 | 45.260 | 327 | 165 | 3 | 30 | 356 | 38 | 350 | 4.66e-97 | 300 |
| Msa0997290 | AT2G44460.2 | 45.833 | 360 | 172 | 8 | 161 | 498 | 3 | 361 | 3.32e-92 | 288 |
| Msa0997290 | AT1G61810.2 | 47.909 | 263 | 135 | 2 | 48 | 308 | 38 | 300 | 5.51e-85 | 265 |
| Msa0997290 | AT1G60270.2 | 45.675 | 289 | 145 | 4 | 110 | 387 | 1 | 288 | 2.64e-84 | 262 |
| Msa0997290 | AT5G48375.1 | 38.049 | 410 | 185 | 8 | 70 | 461 | 53 | 411 | 1.04e-83 | 266 |
| Msa0997290 | AT2G44480.5 | 43.894 | 303 | 152 | 3 | 212 | 496 | 1 | 303 | 2.03e-81 | 256 |
| Msa0997290 | AT1G51490.1 | 40.181 | 331 | 170 | 11 | 50 | 371 | 27 | 338 | 1.34e-69 | 228 |
| Msa0997290 | AT5G16580.1 | 38.225 | 293 | 155 | 7 | 178 | 451 | 12 | 297 | 3.15e-52 | 179 |
Find 97 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCATCCCCTTGTTTA+TGG | 0.184377 | 6_4:-76539522 | Msa0997290:CDS |
| AGGGCCGTGGCCCTAGTATT+TGG | 0.204133 | 6_4:-76542578 | Msa0997290:CDS |
| CCTATGTACTTATCTGAAAA+TGG | 0.261140 | 6_4:-76538741 | Msa0997290:intron |
| GTATCCAAATGCACTGTTTC+AGG | 0.271354 | 6_4:+76542690 | None:intergenic |
| AACCAATATGCAGACATCTT+AGG | 0.282698 | 6_4:+76538368 | None:intergenic |
| ATGGAACTGGCAAGGTAAAT+TGG | 0.292285 | 6_4:-76540780 | Msa0997290:CDS |
| GCTGCTCTTGGCTATGATAA+TGG | 0.303187 | 6_4:-76540308 | Msa0997290:CDS |
| AATTGTACAGCTGGAAATTC+AGG | 0.314656 | 6_4:-76540248 | Msa0997290:CDS |
| GATAACTTTGAATGGAGATT+AGG | 0.315709 | 6_4:-76538446 | Msa0997290:CDS |
| ATAACTTTGAATGGAGATTA+GGG | 0.318193 | 6_4:-76538445 | Msa0997290:CDS |
| GGAAGGTGTTCAAAAGAATA+TGG | 0.324523 | 6_4:-76540272 | Msa0997290:CDS |
| CTTCCTCCTCAGTAAACTTT+GGG | 0.334125 | 6_4:+76539457 | None:intergenic |
| GATTGATAGCCAGGGACTTT+TGG | 0.337835 | 6_4:+76539351 | None:intergenic |
| ACCAATATGCAGACATCTTA+GGG | 0.340920 | 6_4:+76538369 | None:intergenic |
| AAATTGTGAGCTACAGTATA+AGG | 0.347951 | 6_4:+76540218 | None:intergenic |
| GAAACAGTGCATTTGGATAC+TGG | 0.355962 | 6_4:-76542687 | Msa0997290:CDS |
| ACAGGGATTGTCGCAAATAA+TGG | 0.357337 | 6_4:-76541189 | Msa0997290:intron |
| TTTCCTAAAGGGTTTGTGTT+TGG | 0.360877 | 6_4:-76542645 | Msa0997290:CDS |
| ACTTCCTCCTCAGTAAACTT+TGG | 0.375248 | 6_4:+76539456 | None:intergenic |
| ACTCCAAACACAAACCCTTT+AGG | 0.380059 | 6_4:+76542642 | None:intergenic |
| AGTGCCTGAAACAGTGCATT+TGG | 0.386606 | 6_4:-76542694 | Msa0997290:CDS |
| GGGCCGTGGCCCTAGTATTT+GGG | 0.395338 | 6_4:-76542577 | Msa0997290:CDS |
| CCCCTAAGATGTCTGCATAT+TGG | 0.396318 | 6_4:-76538370 | Msa0997290:CDS |
| CATTGCTTGATAACTTTGAA+TGG | 0.399596 | 6_4:-76538454 | Msa0997290:CDS |
| ATGAAAACATCCCAAATACT+AGG | 0.410209 | 6_4:+76542567 | None:intergenic |
| TCAGCCTTTGATCTTGTAAG+AGG | 0.416498 | 6_4:+76539871 | None:intergenic |
| GATGATGGAGCAAATGTGTT+TGG | 0.416603 | 6_4:-76538491 | Msa0997290:CDS |
| CCAAGAGTTGTTGCTGCTCT+TGG | 0.417648 | 6_4:-76540320 | Msa0997290:CDS |
| GATCGATTACTTACTCGAAA+AGG | 0.419740 | 6_4:-76540731 | Msa0997290:CDS |
| TTCCAATCCGATTGATAGCC+AGG | 0.422659 | 6_4:+76539342 | None:intergenic |
| GAAAAGCAAAAGGGTAGGAT+TGG | 0.432684 | 6_4:-76539922 | Msa0997290:CDS |
| AGAACTATGCAAAATATTGT+TGG | 0.445283 | 6_4:-76539489 | Msa0997290:CDS |
| TGTGTTAGTGCTTCAATCAT+AGG | 0.447465 | 6_4:+76538143 | None:intergenic |
| GAATATGGAAATTGTACAGC+TGG | 0.451912 | 6_4:-76540257 | Msa0997290:CDS |
| AACTTTGATACAGATGGAAC+TGG | 0.454790 | 6_4:-76540793 | Msa0997290:intron |
| GAGCTAAAGGAAGGTCATAA+TGG | 0.457252 | 6_4:+76540582 | None:intergenic |
| ATCGATTACTTACTCGAAAA+GGG | 0.458413 | 6_4:-76540730 | Msa0997290:intron |
| CTAAAGAAAGCTATAGATGA+TGG | 0.459612 | 6_4:-76538506 | Msa0997290:CDS |
| AACAACTCTTGGTTCATTGA+AGG | 0.467652 | 6_4:+76540331 | None:intergenic |
| GTTGTTGTTAGTTCAGCTAA+TGG | 0.468610 | 6_4:-76542723 | Msa0997290:CDS |
| GAACTATGCAAAATATTGTT+GGG | 0.468791 | 6_4:-76539488 | Msa0997290:CDS |
| TATTTCAACTCAAGAGCTAA+AGG | 0.473991 | 6_4:+76540569 | None:intergenic |
| TTAGGGTACACATCAAGGTT+TGG | 0.474691 | 6_4:-76538428 | Msa0997290:CDS |
| CACTTCACTAGTGTTGAAGA+TGG | 0.482754 | 6_4:-76542805 | Msa0997290:exon |
| CCAAGAGCAGCAACAACTCT+TGG | 0.484195 | 6_4:+76540320 | None:intergenic |
| GGAGATTAGGGTACACATCA+AGG | 0.485807 | 6_4:-76538433 | Msa0997290:CDS |
| TGTTGTGTCATGTAAACCCT+TGG | 0.488251 | 6_4:+76538562 | None:intergenic |
| GACTTGATTAATGCAAGTCT+TGG | 0.490418 | 6_4:-76538207 | Msa0997290:three_prime_UTR |
| ATGGAGATAGAGTTAAGAAC+TGG | 0.490424 | 6_4:-76540358 | Msa0997290:CDS |
| TGCTTATCAAGTAGAGGGTA+TGG | 0.494673 | 6_4:-76542610 | Msa0997290:CDS |
| ACAAGAATAAACTATTACAA+AGG | 0.503666 | 6_4:-76538542 | Msa0997290:CDS |
| AAAAGTCCCTGGCTATCAAT+CGG | 0.514691 | 6_4:-76539349 | Msa0997290:CDS |
| GTTTCTTAAGTTTCTAATTG+TGG | 0.525652 | 6_4:-76538298 | Msa0997290:three_prime_UTR |
| CAAGAATAAACTATTACAAA+GGG | 0.527220 | 6_4:-76538541 | Msa0997290:CDS |
| TTGGCTATACAATGTACCAT+GGG | 0.531425 | 6_4:-76538811 | Msa0997290:CDS |
| TCCCTGGCTATCAATCGGAT+TGG | 0.537085 | 6_4:-76539344 | Msa0997290:CDS |
| AGTGTTGAAGATGGTGATGT+TGG | 0.538139 | 6_4:-76542796 | Msa0997290:exon |
| ACAGGAAGATATAGATCTCA+TGG | 0.540465 | 6_4:-76540948 | Msa0997290:intron |
| TTGGAAAATGTTACATTACC+AGG | 0.543889 | 6_4:+76538581 | None:intergenic |
| AACTTCTGCTTATCAAGTAG+AGG | 0.544999 | 6_4:-76542616 | Msa0997290:CDS |
| TAAGTACTTACACAACATTA+CGG | 0.552411 | 6_4:+76540531 | None:intergenic |
| CAAATCAGTAATGTACATCA+AGG | 0.552581 | 6_4:-76538781 | Msa0997290:CDS |
| TTTAGGAAAAGCAAAAGGGT+AGG | 0.554677 | 6_4:-76539927 | Msa0997290:intron |
| GAGGGTATGGCTAGCAAAGA+GGG | 0.562306 | 6_4:-76542597 | Msa0997290:CDS |
| ATGGCTAGCAAAGAGGGCCG+TGG | 0.569958 | 6_4:-76542591 | Msa0997290:CDS |
| TGAAAACATCCCAAATACTA+GGG | 0.582780 | 6_4:+76542568 | None:intergenic |
| TATCAAGCAATGACCAAGCA+TGG | 0.588296 | 6_4:+76538465 | None:intergenic |
| ATTGTCGCAAATAATGGCAC+AGG | 0.588601 | 6_4:-76541183 | Msa0997290:CDS |
| CAAGCAAAACCAAAAGTCCC+TGG | 0.590365 | 6_4:-76539360 | Msa0997290:CDS |
| TGGACCACGAGATTGAGAAC+CGG | 0.593138 | 6_4:+76540903 | None:intergenic |
| TTTCAGATAAGTACATAGGT+GGG | 0.594742 | 6_4:+76538745 | None:intergenic |
| GGAGGAAGTGAAACTTGTGA+AGG | 0.603714 | 6_4:-76539442 | Msa0997290:CDS |
| ACTTCTGCTTATCAAGTAGA+GGG | 0.604107 | 6_4:-76542615 | Msa0997290:CDS |
| CTTGGCTATACAATGTACCA+TGG | 0.606444 | 6_4:-76538812 | Msa0997290:CDS |
| TGAGCCTCTTACAAGATCAA+AGG | 0.608751 | 6_4:-76539875 | Msa0997290:CDS |
| TTTGTAGGCATGGATGATCC+TGG | 0.610860 | 6_4:-76538599 | Msa0997290:intron |
| AGAGGGTATGGCTAGCAAAG+AGG | 0.611917 | 6_4:-76542598 | Msa0997290:CDS |
| TCAACTCAAGAGCTAAAGGA+AGG | 0.616683 | 6_4:+76540573 | None:intergenic |
| CATCCCAAATACTAGGGCCA+CGG | 0.617275 | 6_4:+76542574 | None:intergenic |
| GCTCTTGAGTTGAAATACAA+CGG | 0.617381 | 6_4:-76540563 | Msa0997290:CDS |
| GAGGAAGTGAAACTTGTGAA+GGG | 0.622041 | 6_4:-76539441 | Msa0997290:CDS |
| TCCAATCCGATTGATAGCCA+GGG | 0.623481 | 6_4:+76539343 | None:intergenic |
| TTGGATACTCACCATAAACA+AGG | 0.626001 | 6_4:+76539511 | None:intergenic |
| CAGTGCATTTGGATACTGGA+GGG | 0.628351 | 6_4:-76542683 | Msa0997290:CDS |
| ATGTGTTTGGATACCATGCT+TGG | 0.628865 | 6_4:-76538478 | Msa0997290:CDS |
| ACTGATTTGTACAAGCCCCA+TGG | 0.629007 | 6_4:+76538795 | None:intergenic |
| TGATACAGATGGAACTGGCA+AGG | 0.632413 | 6_4:-76540788 | Msa0997290:intron |
| TGGATACTCACCATAAACAA+GGG | 0.638550 | 6_4:+76539512 | None:intergenic |
| ACTGGCAAGGTAAATTGGAA+AGG | 0.638610 | 6_4:-76540775 | Msa0997290:CDS |
| TAATGGTAGAGATTTGCGTA+AGG | 0.644051 | 6_4:+76540599 | None:intergenic |
| ACTCCCAAAGTTTACTGAGG+AGG | 0.653162 | 6_4:-76539460 | Msa0997290:CDS |
| GGATACTCACCATAAACAAG+GGG | 0.663952 | 6_4:+76539513 | None:intergenic |
| ACAGTGCATTTGGATACTGG+AGG | 0.685224 | 6_4:-76542684 | Msa0997290:CDS |
| AATACCGGTTCTCAATCTCG+TGG | 0.697678 | 6_4:-76540907 | Msa0997290:CDS |
| CCAATATGCAGACATCTTAG+GGG | 0.704502 | 6_4:+76538370 | None:intergenic |
| CAGACTCCCAAAGTTTACTG+AGG | 0.726786 | 6_4:-76539463 | Msa0997290:CDS |
| TGGCTATACAATGTACCATG+GGG | 0.741096 | 6_4:-76538810 | Msa0997290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTAAAAATTTTAAAAA+TGG | + | chr6_4:76541710-76541729 | None:intergenic | 0.0% |
| !! | GATAAAAAAAAAATACAAAT+TGG | - | chr6_4:76538530-76538549 | Msa0997290:CDS | 10.0% |
| !!! | AATCTCTTTTAAAAAAAAAA+TGG | - | chr6_4:76538909-76538928 | Msa0997290:intron | 10.0% |
| !! | TTCAATTAAATTTCAATTAA+AGG | + | chr6_4:76539875-76539894 | None:intergenic | 10.0% |
| !!! | AGTTTAAAATTGATTATTAA+TGG | + | chr6_4:76540182-76540201 | None:intergenic | 10.0% |
| !! | ATCAAAATATTAATATTACT+TGG | + | chr6_4:76540844-76540863 | None:intergenic | 10.0% |
| !!! | GATTTTTTTCAAATTATTAA+CGG | - | chr6_4:76541341-76541360 | Msa0997290:intron | 10.0% |
| !! | AAGAATAATTAATTGAGATT+AGG | + | chr6_4:76538475-76538494 | None:intergenic | 15.0% |
| !!! | TTGTTTTGATGAAATTATTT+TGG | - | chr6_4:76538578-76538597 | Msa0997290:CDS | 15.0% |
| !!! | TGTTTTGATGAAATTATTTT+GGG | - | chr6_4:76538579-76538598 | Msa0997290:CDS | 15.0% |
| !! | ACAAATCTTAATAAAAATCT+AGG | + | chr6_4:76539138-76539157 | None:intergenic | 15.0% |
| !!! | TTTTAACAAATGAGTAATAA+CGG | + | chr6_4:76539635-76539654 | None:intergenic | 15.0% |
| !! | ACATTATATAAGATGTTATT+TGG | + | chr6_4:76539959-76539978 | None:intergenic | 15.0% |
| !! | AGAAAAATATTTGAATTACT+TGG | + | chr6_4:76540122-76540141 | None:intergenic | 15.0% |
| !!! | AAATTTTCTATCAACATTTT+CGG | + | chr6_4:76540492-76540511 | None:intergenic | 15.0% |
| !!! | AAATGTGATTTTATTTTATC+TGG | - | chr6_4:76540524-76540543 | Msa0997290:intron | 15.0% |
| !!! | TTTTGATTCTTTTTTAGATT+AGG | - | chr6_4:76540857-76540876 | Msa0997290:intron | 15.0% |
| !! | AATTTCTTAGTGTATATTTA+TGG | - | chr6_4:76541429-76541448 | Msa0997290:intron | 15.0% |
| !!! | AAAATTTTAAAAATGGTTGA+AGG | + | chr6_4:76541703-76541722 | None:intergenic | 15.0% |
| !!! | GTAAATATTTAATGATTTGT+AGG | - | chr6_4:76542377-76542396 | Msa0997290:intron | 15.0% |
| !! | TATAAGATTGAAATAGCAAA+AGG | + | chr6_4:76538709-76538728 | None:intergenic | 20.0% |
| !! | TTCAATTATGTTATGTCTAT+TGG | + | chr6_4:76538841-76538860 | None:intergenic | 20.0% |
| !!! | AAAATGGTAAGATTTTGATT+TGG | - | chr6_4:76538925-76538944 | Msa0997290:intron | 20.0% |
| !!! | ACAGTTTTATGTCTTTTTTT+GGG | - | chr6_4:76539203-76539222 | Msa0997290:intron | 20.0% |
| !! | TGGTTATCAAATATTACTAT+TGG | + | chr6_4:76539272-76539291 | None:intergenic | 20.0% |
| !!! | TTTATAGTATTTCCTTTTAG+AGG | + | chr6_4:76539305-76539324 | None:intergenic | 20.0% |
| !! | TGATATTCTCAAATTATTAG+TGG | + | chr6_4:76539521-76539540 | None:intergenic | 20.0% |
| !! | TGCATATAATAGAAAGAAAA+GGG | + | chr6_4:76539695-76539714 | None:intergenic | 20.0% |
| !! | TTGCATATAATAGAAAGAAA+AGG | + | chr6_4:76539696-76539715 | None:intergenic | 20.0% |
| !! | TAAATGTAAGATTCATACTA+AGG | + | chr6_4:76539931-76539950 | None:intergenic | 20.0% |
| !!! | ATTTTAAACTTTGATACAGA+TGG | - | chr6_4:76540192-76540211 | Msa0997290:CDS | 20.0% |
| !!! | ATGTTGATAGAAAATTTTAC+AGG | - | chr6_4:76540495-76540514 | Msa0997290:intron | 20.0% |
| !!! | AATGATCGATGTTTTAAAAT+TGG | - | chr6_4:76540565-76540584 | Msa0997290:CDS | 20.0% |
| !!! | TTTTTTTAGGAAAAGCAAAA+GGG | - | chr6_4:76541060-76541079 | Msa0997290:intron | 20.0% |
| !! | AAATTAACAAATATGAAGCA+CGG | + | chr6_4:76541414-76541433 | None:intergenic | 20.0% |
| !!! | ACATATTTTATAGCCTAAAT+TGG | + | chr6_4:76541769-76541788 | None:intergenic | 20.0% |
| !! | ATAACAATAACTAAAATCGA+CGG | + | chr6_4:76541826-76541845 | None:intergenic | 20.0% |
| !!! | ATTGATTTTCTTGCTAAATA+TGG | - | chr6_4:76541988-76542007 | Msa0997290:intron | 20.0% |
| !!! | ATTTATATGTGATACTTTTC+AGG | - | chr6_4:76542147-76542166 | Msa0997290:intron | 20.0% |
| !!! | AAAATGAAGCATTCAAATAA+AGG | + | chr6_4:76542298-76542317 | None:intergenic | 20.0% |
| !! | ACAAGAATAAACTATTACAA+AGG | - | chr6_4:76542449-76542468 | Msa0997290:intron | 20.0% |
| !! | CAAGAATAAACTATTACAAA+GGG | - | chr6_4:76542450-76542469 | Msa0997290:intron | 20.0% |
| !!! | ATACAAATTGGTGTTTTCAT+TGG | - | chr6_4:76538542-76538561 | Msa0997290:CDS | 25.0% |
| !!! | TATGTTGGTTTGTGTAAAAT+TGG | - | chr6_4:76538640-76538659 | Msa0997290:intron | 25.0% |
| !!! | ATGTTGGTTTGTGTAAAATT+GGG | - | chr6_4:76538641-76538660 | Msa0997290:intron | 25.0% |
| ! | ATGTAAAGTGTACATCTTTA+CGG | - | chr6_4:76538993-76539012 | Msa0997290:intron | 25.0% |
| !!! | AAAAGAAGTATTTTTTGGAC+TGG | + | chr6_4:76539075-76539094 | None:intergenic | 25.0% |
| !! | GTCCAAAAAATACTTCTTTT+TGG | - | chr6_4:76539075-76539094 | Msa0997290:intron | 25.0% |
| !!! | GACCAAAAAGAAGTATTTTT+TGG | + | chr6_4:76539080-76539099 | None:intergenic | 25.0% |
| !!! | CACAGTTTTATGTCTTTTTT+TGG | - | chr6_4:76539202-76539221 | Msa0997290:intron | 25.0% |
| ! | TAACTCCTAAAAATAAGTAG+TGG | + | chr6_4:76539231-76539250 | None:intergenic | 25.0% |
| ! | AGGAAATACTATAAACAACT+TGG | - | chr6_4:76539310-76539329 | Msa0997290:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr6_4:76539546-76539565 | Msa0997290:intron | 25.0% |
| ! | AATTAACACAATCACAAAAC+TGG | - | chr6_4:76539657-76539676 | Msa0997290:intron | 25.0% |
| ! | AATTAACCTTGAGATCAAAT+TGG | - | chr6_4:76539723-76539742 | Msa0997290:intron | 25.0% |
| !! | TCTTTGTTTCAATTCATAAC+AGG | - | chr6_4:76539784-76539803 | Msa0997290:intron | 25.0% |
| !! | CTTTGTTTCAATTCATAACA+GGG | - | chr6_4:76539785-76539804 | Msa0997290:intron | 25.0% |
| !! | AAGATTCATACTAAGGATTT+TGG | + | chr6_4:76539924-76539943 | None:intergenic | 25.0% |
| ! | TGATTATATATATGTGTGTG+TGG | - | chr6_4:76539984-76540003 | Msa0997290:intron | 25.0% |
| !!! | AGCTAAATTTTGATCAATAC+CGG | - | chr6_4:76540069-76540088 | Msa0997290:intron | 25.0% |
| ! | TGAATTACTTGGAAAAATTC+TGG | + | chr6_4:76540111-76540130 | None:intergenic | 25.0% |
| !! | TCGAAATACTAACATAGTTT+TGG | - | chr6_4:76540305-76540324 | Msa0997290:CDS | 25.0% |
| ! | TAAGTACTTACACAACATTA+CGG | + | chr6_4:76540463-76540482 | None:intergenic | 25.0% |
| !!! | GATTTTTGTTTCAAGACATA+TGG | - | chr6_4:76540614-76540633 | Msa0997290:intron | 25.0% |
| !!! | GTTTTTTTAGGAAAAGCAAA+AGG | - | chr6_4:76541059-76541078 | Msa0997290:intron | 25.0% |
| !! | GAATTTTGTTGGATTTTGTT+TGG | - | chr6_4:76541091-76541110 | Msa0997290:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr6_4:76539546-76539565 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAACGGTGT+CGG | - | chr6_4:76541347-76541366 | Msa0997290:intron | 25.0% |
| !! | ACAATATTTTGCATAGTTCT+TGG | + | chr6_4:76541502-76541521 | None:intergenic | 25.0% |
| ! | AGAACTATGCAAAATATTGT+TGG | - | chr6_4:76541502-76541521 | Msa0997290:intron | 25.0% |
| ! | GAACTATGCAAAATATTGTT+GGG | - | chr6_4:76541503-76541522 | Msa0997290:intron | 25.0% |
| ! | TAAGGATGAATGTTCAAATT+TGG | - | chr6_4:76542341-76542360 | Msa0997290:intron | 25.0% |
| ! | AAGGATGAATGTTCAAATTT+GGG | - | chr6_4:76542342-76542361 | Msa0997290:intron | 25.0% |
| !! | TATTTAATGATTTGTAGGCA+TGG | - | chr6_4:76542382-76542401 | Msa0997290:intron | 25.0% |
| ! | ATAACTTTGAATGGAGATTA+GGG | - | chr6_4:76542546-76542565 | Msa0997290:intron | 25.0% |
| !! | CTCAACAATTTACTTCTTTT+TGG | + | chr6_4:76542663-76542682 | None:intergenic | 25.0% |
| ! | GTTTCTTAAGTTTCTAATTG+TGG | - | chr6_4:76542693-76542712 | Msa0997290:CDS | 25.0% |
| !!! | TAGTGAATAATGTGTTTTTG+TGG | - | chr6_4:76542716-76542735 | Msa0997290:CDS | 25.0% |
| !!! | ATAATGTGTTTTTGTGGTTT+TGG | - | chr6_4:76542722-76542741 | Msa0997290:CDS | 25.0% |
| !!! | TTTTTGTGGTTTTGGATAAA+AGG | - | chr6_4:76542730-76542749 | Msa0997290:CDS | 25.0% |
| ! | AGTAGAGATGTTTTTCCTAA+AGG | - | chr6_4:76538334-76538353 | Msa0997290:exon | 30.0% |
| ! | GTAGAGATGTTTTTCCTAAA+GGG | - | chr6_4:76538335-76538354 | Msa0997290:exon | 30.0% |
| TGAAAACATCCCAAATACTA+GGG | + | chr6_4:76538426-76538445 | None:intergenic | 30.0% | |
| ATGAAAACATCCCAAATACT+AGG | + | chr6_4:76538427-76538446 | None:intergenic | 30.0% | |
| ! | GATGTTTTCATCAAAAAACC+TGG | - | chr6_4:76538436-76538455 | Msa0997290:CDS | 30.0% |
| ! | CACTAAACCAAAAAGTATGT+TGG | - | chr6_4:76538625-76538644 | Msa0997290:intron | 30.0% |
| ! | ACACAAACCAACATACTTTT+TGG | + | chr6_4:76538635-76538654 | None:intergenic | 30.0% |
| !! | CTTTTAGAGGAGTAACATAA+TGG | + | chr6_4:76539292-76539311 | None:intergenic | 30.0% |
| CATTATGTTACTCCTCTAAA+AGG | - | chr6_4:76539290-76539309 | Msa0997290:intron | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | + | chr6_4:76539515-76539534 | None:intergenic | 30.0% | |
| CTTAAACCAATTTGATCTCA+AGG | + | chr6_4:76539732-76539751 | None:intergenic | 30.0% | |
| TCAAGTATGTTCAATTTGAC+AGG | - | chr6_4:76540025-76540044 | Msa0997290:intron | 30.0% | |
| ATCGATTACTTACTCGAAAA+GGG | - | chr6_4:76540261-76540280 | Msa0997290:CDS | 30.0% | |
| CTATGTTAGTATTTCGACTA+TGG | + | chr6_4:76540302-76540321 | None:intergenic | 30.0% | |
| TATTTCAACTCAAGAGCTAA+AGG | + | chr6_4:76540425-76540444 | None:intergenic | 30.0% | |
| !!! | TCGATGTTTTAAAATTGGAC+AGG | - | chr6_4:76540570-76540589 | Msa0997290:CDS | 30.0% |
| AAATTGTGAGCTACAGTATA+AGG | + | chr6_4:76540776-76540795 | None:intergenic | 30.0% | |
| ! | ATCATGATGTGTCGTTATTT+CGG | - | chr6_4:76540912-76540931 | Msa0997290:CDS | 30.0% |
| CCACAAGATAAAAACATCAA+AGG | + | chr6_4:76541028-76541047 | None:intergenic | 30.0% | |
| !! | CCTTTGATGTTTTTATCTTG+TGG | - | chr6_4:76541025-76541044 | Msa0997290:intron | 30.0% |
| !!! | GTGATGTTTGTGGTTTTTTT+AGG | - | chr6_4:76541047-76541066 | Msa0997290:intron | 30.0% |
| ! | AGAGCTAGAGATTTTCATAT+TGG | - | chr6_4:76541159-76541178 | Msa0997290:CDS | 30.0% |
| ! | TATTGGCTGGTAAAAATTGT+TGG | - | chr6_4:76541176-76541195 | Msa0997290:CDS | 30.0% |
| CATAAGAATTGTATGATGCA+CGG | - | chr6_4:76541226-76541245 | Msa0997290:intron | 30.0% | |
| ! | TTATGGTGTTTAATTTCCAC+AGG | - | chr6_4:76541446-76541465 | Msa0997290:intron | 30.0% |
| TACCTAGAGACTAAATTGAA+TGG | + | chr6_4:76541737-76541756 | None:intergenic | 30.0% | |
| AAGAAAATCAATGTCAGTCA+TGG | + | chr6_4:76541980-76541999 | None:intergenic | 30.0% | |
| AATATGGAAGATGCTAAGAA+TGG | - | chr6_4:76542004-76542023 | Msa0997290:intron | 30.0% | |
| ACTTGTTTCAAACTTACTCT+TGG | + | chr6_4:76542043-76542062 | None:intergenic | 30.0% | |
| CAAATCAGTAATGTACATCA+AGG | - | chr6_4:76542210-76542229 | Msa0997290:intron | 30.0% | |
| TTTCAGATAAGTACATAGGT+GGG | + | chr6_4:76542249-76542268 | None:intergenic | 30.0% | |
| ! | TTTTCAGATAAGTACATAGG+TGG | + | chr6_4:76542250-76542269 | None:intergenic | 30.0% |
| ! | CCATTTTCAGATAAGTACAT+AGG | + | chr6_4:76542253-76542272 | None:intergenic | 30.0% |
| CCTATGTACTTATCTGAAAA+TGG | - | chr6_4:76542250-76542269 | Msa0997290:intron | 30.0% | |
| ATTCATCCTTACAAAAAGGA+GGG | + | chr6_4:76542332-76542351 | None:intergenic | 30.0% | |
| GAACATTCATCCTTACAAAA+AGG | + | chr6_4:76542336-76542355 | None:intergenic | 30.0% | |
| TTGGAAAATGTTACATTACC+AGG | + | chr6_4:76542413-76542432 | None:intergenic | 30.0% | |
| !! | TGGTAATGTAACATTTTCCA+AGG | - | chr6_4:76542412-76542431 | Msa0997290:intron | 30.0% |
| ! | GGTAATGTAACATTTTCCAA+GGG | - | chr6_4:76542413-76542432 | Msa0997290:intron | 30.0% |
| CTAAAGAAAGCTATAGATGA+TGG | - | chr6_4:76542485-76542504 | Msa0997290:intron | 30.0% | |
| ! | CATTGCTTGATAACTTTGAA+TGG | - | chr6_4:76542537-76542556 | Msa0997290:intron | 30.0% |
| GATAACTTTGAATGGAGATT+AGG | - | chr6_4:76542545-76542564 | Msa0997290:intron | 30.0% | |
| ! | TATTTGTGTGCAAGTGTTGT+GGG | + | chr6_4:76538154-76538173 | None:intergenic | 35.0% |
| ! | GTTGTTGTTAGTTCAGCTAA+TGG | - | chr6_4:76538268-76538287 | Msa0997290:three_prime_UTR | 35.0% |
| TTTCCTAAAGGGTTTGTGTT+TGG | - | chr6_4:76538346-76538365 | Msa0997290:CDS | 35.0% | |
| AACTTCTGCTTATCAAGTAG+AGG | - | chr6_4:76538375-76538394 | Msa0997290:CDS | 35.0% | |
| ACTTCTGCTTATCAAGTAGA+GGG | - | chr6_4:76538376-76538395 | Msa0997290:CDS | 35.0% | |
| TTAGGTAAGAAACACAAACC+AGG | + | chr6_4:76538457-76538476 | None:intergenic | 35.0% | |
| ! | GATTTGGTCTATCTGTTTGT+CGG | - | chr6_4:76538941-76538960 | Msa0997290:intron | 35.0% |
| TATCTGTTTGTCGGAAAAAG+TGG | - | chr6_4:76538950-76538969 | Msa0997290:intron | 35.0% | |
| !! | GGGTTCCACTACTTATTTTT+AGG | - | chr6_4:76539223-76539242 | Msa0997290:intron | 35.0% |
| ACAGGAAGATATAGATCTCA+TGG | - | chr6_4:76540043-76540062 | Msa0997290:intron | 35.0% | |
| AACTTTGATACAGATGGAAC+TGG | - | chr6_4:76540198-76540217 | Msa0997290:CDS | 35.0% | |
| GATCGATTACTTACTCGAAA+AGG | - | chr6_4:76540260-76540279 | Msa0997290:CDS | 35.0% | |
| TTTGTTCCTTAAATCGTTGC+AGG | - | chr6_4:76540362-76540381 | Msa0997290:CDS | 35.0% | |
| TAATGGTAGAGATTTGCGTA+AGG | + | chr6_4:76540395-76540414 | None:intergenic | 35.0% | |
| !! | GCTCTTGAGTTGAAATACAA+CGG | - | chr6_4:76540428-76540447 | Msa0997290:intron | 35.0% |
| ! | ATTGGACAGGAAAGATTTTG+CGG | - | chr6_4:76540583-76540602 | Msa0997290:CDS | 35.0% |
| !! | GAAAGATTTTGCGGATTATG+CGG | - | chr6_4:76540592-76540611 | Msa0997290:CDS | 35.0% |
| ATGGAGATAGAGTTAAGAAC+TGG | - | chr6_4:76540633-76540652 | Msa0997290:intron | 35.0% | |
| AACAACTCTTGGTTCATTGA+AGG | + | chr6_4:76540663-76540682 | None:intergenic | 35.0% | |
| ! | ATTCTTTTGAACACCTTCCA+GGG | + | chr6_4:76540718-76540737 | None:intergenic | 35.0% |
| ! | TATTCTTTTGAACACCTTCC+AGG | + | chr6_4:76540719-76540738 | None:intergenic | 35.0% |
| !! | GGAAGGTGTTCAAAAGAATA+TGG | - | chr6_4:76540719-76540738 | Msa0997290:intron | 35.0% |
| GAATATGGAAATTGTACAGC+TGG | - | chr6_4:76540734-76540753 | Msa0997290:CDS | 35.0% | |
| AATTGTACAGCTGGAAATTC+AGG | - | chr6_4:76540743-76540762 | Msa0997290:CDS | 35.0% | |
| ! | TTATCTTGTGGTGATGTTTG+TGG | - | chr6_4:76541037-76541056 | Msa0997290:intron | 35.0% |
| TTTAGGAAAAGCAAAAGGGT+AGG | - | chr6_4:76541064-76541083 | Msa0997290:intron | 35.0% | |
| ! | CTAGAGATTTTCATATTGGC+TGG | - | chr6_4:76541163-76541182 | Msa0997290:CDS | 35.0% |
| CGTGCATCATACAATTCTTA+TGG | + | chr6_4:76541228-76541247 | None:intergenic | 35.0% | |
| !! | AAATTATTAACGGTGTCGGT+GGG | - | chr6_4:76541351-76541370 | Msa0997290:intron | 35.0% |
| ACAAATATGAAGCACGGATA+CGG | + | chr6_4:76541408-76541427 | None:intergenic | 35.0% | |
| ! | TTCATTCATCCCCTTGTTTA+TGG | - | chr6_4:76541469-76541488 | Msa0997290:intron | 35.0% |
| TGGATACTCACCATAAACAA+GGG | + | chr6_4:76541482-76541501 | None:intergenic | 35.0% | |
| TTGGATACTCACCATAAACA+AGG | + | chr6_4:76541483-76541502 | None:intergenic | 35.0% | |
| !! | AAGGGCTCAATTGATTTTGT+TGG | - | chr6_4:76541568-76541587 | Msa0997290:intron | 35.0% |
| !!! | ACTTTTGGTTTTGCTTGATG+AGG | + | chr6_4:76541628-76541647 | None:intergenic | 35.0% |
| ! | TATCAATCGGATTGGAATGT+AGG | - | chr6_4:76541655-76541674 | Msa0997290:intron | 35.0% |
| ! | ATCAATCGGATTGGAATGTA+GGG | - | chr6_4:76541656-76541675 | Msa0997290:intron | 35.0% |
| CTAGAGACTAAATTGAATGG+TGG | + | chr6_4:76541734-76541753 | None:intergenic | 35.0% | |
| CACCATTCAATTTAGTCTCT+AGG | - | chr6_4:76541732-76541751 | Msa0997290:intron | 35.0% | |
| !! | CTTTTCAGGCATATTCATCT+TGG | - | chr6_4:76542161-76542180 | Msa0997290:intron | 35.0% |
| TTGGCTATACAATGTACCAT+GGG | - | chr6_4:76542180-76542199 | Msa0997290:intron | 35.0% | |
| ! | TCTTAACCCTCCTTTTTGTA+AGG | - | chr6_4:76542323-76542342 | Msa0997290:intron | 35.0% |
| CATTCATCCTTACAAAAAGG+AGG | + | chr6_4:76542333-76542352 | None:intergenic | 35.0% | |
| ACCAATATGCAGACATCTTA+GGG | + | chr6_4:76542625-76542644 | None:intergenic | 35.0% | |
| AACCAATATGCAGACATCTT+AGG | + | chr6_4:76542626-76542645 | None:intergenic | 35.0% | |
| ! | TTGGATAAAAGGCCTCTTTT+TGG | - | chr6_4:76542741-76542760 | Msa0997290:CDS | 35.0% |
| GACTTGATTAATGCAAGTCT+TGG | - | chr6_4:76542784-76542803 | Msa0997290:CDS | 35.0% | |
| TGTGTTAGTGCTTCAATCAT+AGG | + | chr6_4:76542851-76542870 | None:intergenic | 35.0% | |
| ! | CTATTTGTGTGCAAGTGTTG+TGG | + | chr6_4:76538155-76538174 | None:intergenic | 40.0% |
| ! | CACTTCACTAGTGTTGAAGA+TGG | - | chr6_4:76538186-76538205 | Msa0997290:three_prime_UTR | 40.0% |
| ! | AGTGTTGAAGATGGTGATGT+TGG | - | chr6_4:76538195-76538214 | Msa0997290:three_prime_UTR | 40.0% |
| GTATCCAAATGCACTGTTTC+AGG | + | chr6_4:76538304-76538323 | None:intergenic | 40.0% | |
| GAAACAGTGCATTTGGATAC+TGG | - | chr6_4:76538304-76538323 | Msa0997290:three_prime_UTR | 40.0% | |
| ACTCCAAACACAAACCCTTT+AGG | + | chr6_4:76538352-76538371 | None:intergenic | 40.0% | |
| TGCTTATCAAGTAGAGGGTA+TGG | - | chr6_4:76538381-76538400 | Msa0997290:CDS | 40.0% | |
| ACAGGGATTGTCGCAAATAA+TGG | - | chr6_4:76539802-76539821 | Msa0997290:intron | 40.0% | |
| ATTGTCGCAAATAATGGCAC+AGG | - | chr6_4:76539808-76539827 | Msa0997290:intron | 40.0% | |
| ATGGAACTGGCAAGGTAAAT+TGG | - | chr6_4:76540211-76540230 | Msa0997290:CDS | 40.0% | |
| ACTGGCAAGGTAAATTGGAA+AGG | - | chr6_4:76540216-76540235 | Msa0997290:CDS | 40.0% | |
| GTAATGCCTGCAACGATTTA+AGG | + | chr6_4:76540371-76540390 | None:intergenic | 40.0% | |
| GAGCTAAAGGAAGGTCATAA+TGG | + | chr6_4:76540412-76540431 | None:intergenic | 40.0% | |
| TCAACTCAAGAGCTAAAGGA+AGG | + | chr6_4:76540421-76540440 | None:intergenic | 40.0% | |
| ! | TTCTTTTGAACACCTTCCAG+GGG | + | chr6_4:76540717-76540736 | None:intergenic | 40.0% |
| GCAGCTTCAACAAAATCACA+TGG | - | chr6_4:76540950-76540969 | Msa0997290:intron | 40.0% | |
| GAAAAGCAAAAGGGTAGGAT+TGG | - | chr6_4:76541069-76541088 | Msa0997290:intron | 40.0% | |
| ! | GGGTAGGATTGGAATTTTGT+TGG | - | chr6_4:76541080-76541099 | Msa0997290:intron | 40.0% |
| TGAGCCTCTTACAAGATCAA+AGG | - | chr6_4:76541116-76541135 | Msa0997290:intron | 40.0% | |
| TCAGCCTTTGATCTTGTAAG+AGG | + | chr6_4:76541123-76541142 | None:intergenic | 40.0% | |
| ! | CAAATTATTAACGGTGTCGG+TGG | - | chr6_4:76541350-76541369 | Msa0997290:intron | 40.0% |
| GGATACTCACCATAAACAAG+GGG | + | chr6_4:76541481-76541500 | None:intergenic | 40.0% | |
| CTTCCTCCTCAGTAAACTTT+GGG | + | chr6_4:76541537-76541556 | None:intergenic | 40.0% | |
| ACTTCCTCCTCAGTAAACTT+TGG | + | chr6_4:76541538-76541557 | None:intergenic | 40.0% | |
| GAGGAAGTGAAACTTGTGAA+GGG | - | chr6_4:76541550-76541569 | Msa0997290:intron | 40.0% | |
| AAAAGTCCCTGGCTATCAAT+CGG | - | chr6_4:76541642-76541661 | Msa0997290:intron | 40.0% | |
| GGTATCACTCTCTCCAATTT+AGG | - | chr6_4:76541753-76541772 | Msa0997290:intron | 40.0% | |
| AAACTTACTCTTGGTCCAAC+AGG | + | chr6_4:76542034-76542053 | None:intergenic | 40.0% | |
| CTTGGCTATACAATGTACCA+TGG | - | chr6_4:76542179-76542198 | Msa0997290:intron | 40.0% | |
| TGGCTATACAATGTACCATG+GGG | - | chr6_4:76542181-76542200 | Msa0997290:intron | 40.0% | |
| TGTTGTGTCATGTAAACCCT+TGG | + | chr6_4:76542432-76542451 | None:intergenic | 40.0% | |
| !! | GATGATGGAGCAAATGTGTT+TGG | - | chr6_4:76542500-76542519 | Msa0997290:intron | 40.0% |
| ATGTGTTTGGATACCATGCT+TGG | - | chr6_4:76542513-76542532 | Msa0997290:intron | 40.0% | |
| TATCAAGCAATGACCAAGCA+TGG | + | chr6_4:76542529-76542548 | None:intergenic | 40.0% | |
| TTAGGGTACACATCAAGGTT+TGG | - | chr6_4:76542563-76542582 | Msa0997290:CDS | 40.0% | |
| CCAATATGCAGACATCTTAG+GGG | + | chr6_4:76542624-76542643 | None:intergenic | 40.0% | |
| ACATTGCAGAGACCAAAAAG+AGG | + | chr6_4:76542756-76542775 | None:intergenic | 40.0% | |
| AGTGCCTGAAACAGTGCATT+TGG | - | chr6_4:76538297-76538316 | Msa0997290:three_prime_UTR | 45.0% | |
| ACAGTGCATTTGGATACTGG+AGG | - | chr6_4:76538307-76538326 | Msa0997290:three_prime_UTR | 45.0% | |
| CAGTGCATTTGGATACTGGA+GGG | - | chr6_4:76538308-76538327 | Msa0997290:three_prime_UTR | 45.0% | |
| !! | GAGTAATAACGGACACTCCT+CGG | + | chr6_4:76539624-76539643 | None:intergenic | 45.0% |
| !! | AATACCGGTTCTCAATCTCG+TGG | - | chr6_4:76540084-76540103 | Msa0997290:intron | 45.0% |
| TGATACAGATGGAACTGGCA+AGG | - | chr6_4:76540203-76540222 | Msa0997290:CDS | 45.0% | |
| GCTGCTCTTGGCTATGATAA+TGG | - | chr6_4:76540683-76540702 | Msa0997290:intron | 45.0% | |
| !!! | GATAATGGCTTTTTTGCCCC+TGG | - | chr6_4:76540698-76540717 | Msa0997290:intron | 45.0% |
| CAGACTCCCAAAGTTTACTG+AGG | - | chr6_4:76541528-76541547 | Msa0997290:intron | 45.0% | |
| ACTCCCAAAGTTTACTGAGG+AGG | - | chr6_4:76541531-76541550 | Msa0997290:intron | 45.0% | |
| GGAGGAAGTGAAACTTGTGA+AGG | - | chr6_4:76541549-76541568 | Msa0997290:intron | 45.0% | |
| CAAGCAAAACCAAAAGTCCC+TGG | - | chr6_4:76541631-76541650 | Msa0997290:intron | 45.0% | |
| !! | GATTGATAGCCAGGGACTTT+TGG | + | chr6_4:76541643-76541662 | None:intergenic | 45.0% |
| ! | TCCAATCCGATTGATAGCCA+GGG | + | chr6_4:76541651-76541670 | None:intergenic | 45.0% |
| ! | TTCCAATCCGATTGATAGCC+AGG | + | chr6_4:76541652-76541671 | None:intergenic | 45.0% |
| !! | ACTGATTTGTACAAGCCCCA+TGG | + | chr6_4:76542199-76542218 | None:intergenic | 45.0% |
| TTTGTAGGCATGGATGATCC+TGG | - | chr6_4:76542392-76542411 | Msa0997290:intron | 45.0% | |
| GGAGATTAGGGTACACATCA+AGG | - | chr6_4:76542558-76542577 | Msa0997290:CDS | 45.0% | |
| CCCCTAAGATGTCTGCATAT+TGG | - | chr6_4:76542621-76542640 | Msa0997290:CDS | 45.0% | |
| !! | TATCAAATAATAATTTAAAA+AGG | - | chr6_4:76538770-76538789 | Msa0997290:CDS | 5.0% |
| ! | AGAGGGTATGGCTAGCAAAG+AGG | - | chr6_4:76538393-76538412 | Msa0997290:CDS | 50.0% |
| ! | GAGGGTATGGCTAGCAAAGA+GGG | - | chr6_4:76538394-76538413 | Msa0997290:CDS | 50.0% |
| CATCCCAAATACTAGGGCCA+CGG | + | chr6_4:76538420-76538439 | None:intergenic | 50.0% | |
| GACACGACACATGTCTGACA+CGG | - | chr6_4:76539585-76539604 | Msa0997290:intron | 50.0% | |
| ACACGACACATGTCTGACAC+GGG | - | chr6_4:76539586-76539605 | Msa0997290:intron | 50.0% | |
| TGGACCACGAGATTGAGAAC+CGG | + | chr6_4:76540091-76540110 | None:intergenic | 50.0% | |
| CCAAGAGCAGCAACAACTCT+TGG | + | chr6_4:76540674-76540693 | None:intergenic | 50.0% | |
| CCAAGAGTTGTTGCTGCTCT+TGG | - | chr6_4:76540671-76540690 | Msa0997290:intron | 50.0% | |
| !!! | ATGGCTTTTTTGCCCCTGGA+AGG | - | chr6_4:76540702-76540721 | Msa0997290:intron | 50.0% |
| TATGATGCACGGACACTCCT+CGG | - | chr6_4:76541237-76541256 | Msa0997290:intron | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | + | chr6_4:76541402-76541421 | None:intergenic | 50.0% | |
| CAAGGGGATGAATGAACCTG+TGG | + | chr6_4:76541465-76541484 | None:intergenic | 50.0% | |
| TCCCTGGCTATCAATCGGAT+TGG | - | chr6_4:76541647-76541666 | Msa0997290:intron | 50.0% | |
| ! | GCTAAGAATGGAGTGCCTGT+TGG | - | chr6_4:76542016-76542035 | Msa0997290:intron | 50.0% |
| CACGACACATGTCTGACACG+GGG | - | chr6_4:76539587-76539606 | Msa0997290:intron | 55.0% | |
| ACGAGGACACACCTAATCCG+AGG | + | chr6_4:76541257-76541276 | None:intergenic | 55.0% | |
| CACGACACGTGTCTAACACG+AGG | + | chr6_4:76541274-76541293 | None:intergenic | 55.0% | |
| ATGGCTAGCAAAGAGGGCCG+TGG | - | chr6_4:76538400-76538419 | Msa0997290:CDS | 60.0% | |
| AGGGCCGTGGCCCTAGTATT+TGG | - | chr6_4:76538413-76538432 | Msa0997290:CDS | 60.0% | |
| GGGCCGTGGCCCTAGTATTT+GGG | - | chr6_4:76538414-76538433 | Msa0997290:CDS | 60.0% | |
| ACGGGGACACGTCTAATCCG+AGG | - | chr6_4:76539604-76539623 | Msa0997290:intron | 60.0% | |
| CTTGAGCTCACATACGCGCG+CGG | + | chr6_4:76540010-76540029 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr6_4:76541243-76541262 | Msa0997290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 76538136 | 76542877 | 76538136 | ID=Msa0997290;Name=Msa0997290 |
| chr6_4 | mRNA | 76538136 | 76542877 | 76538136 | ID=Msa0997290-mRNA-1;Parent=Msa0997290;Name=Msa0997290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=47|0.9|0.90|1|0.9|0.81|11|204|499 |
| chr6_4 | exon | 76538136 | 76538614 | 76538136 | ID=Msa0997290-mRNA-1:exon:14422;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76538742 | 76538844 | 76538742 | ID=Msa0997290-mRNA-1:exon:14421;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76539341 | 76539545 | 76539341 | ID=Msa0997290-mRNA-1:exon:14420;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76539829 | 76539944 | 76539829 | ID=Msa0997290-mRNA-1:exon:14419;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76540169 | 76540421 | 76540169 | ID=Msa0997290-mRNA-1:exon:14418;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76540542 | 76540629 | 76540542 | ID=Msa0997290-mRNA-1:exon:14417;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76540731 | 76540802 | 76540731 | ID=Msa0997290-mRNA-1:exon:14416;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76540891 | 76540966 | 76540891 | ID=Msa0997290-mRNA-1:exon:14415;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76541149 | 76541207 | 76541149 | ID=Msa0997290-mRNA-1:exon:14414;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76542556 | 76542842 | 76542556 | ID=Msa0997290-mRNA-1:exon:14413;Parent=Msa0997290-mRNA-1 |
| chr6_4 | exon | 76542865 | 76542877 | 76542865 | ID=Msa0997290-mRNA-1:exon:14412;Parent=Msa0997290-mRNA-1 |
| chr6_4 | five_prime_UTR | 76542865 | 76542877 | 76542865 | ID=Msa0997290-mRNA-1:five_prime_utr;Parent=Msa0997290-mRNA-1 |
| chr6_4 | five_prime_UTR | 76542809 | 76542842 | 76542809 | ID=Msa0997290-mRNA-1:five_prime_utr;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76542556 | 76542808 | 76542556 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76541149 | 76541207 | 76541149 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76540891 | 76540966 | 76540891 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76540731 | 76540802 | 76540731 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76540542 | 76540629 | 76540542 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76540169 | 76540421 | 76540169 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76539829 | 76539944 | 76539829 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76539341 | 76539545 | 76539341 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76538742 | 76538844 | 76538742 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | CDS | 76538340 | 76538614 | 76538340 | ID=Msa0997290-mRNA-1:cds;Parent=Msa0997290-mRNA-1 |
| chr6_4 | three_prime_UTR | 76538136 | 76538339 | 76538136 | ID=Msa0997290-mRNA-1:three_prime_utr;Parent=Msa0997290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
