Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0088800 | sp|Q8S9L6|CRK29_ARATH | 38.532 | 218 | 127 | 4 | 37 | 251 | 38 | 251 | 6.97e-38 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0088800 | G8A0Z3 | 94.841 | 252 | 13 | 0 | 1 | 252 | 1 | 252 | 9.52e-179 | 500 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0088800 | -0.806301 | 8.790237e-50 | -8.615850e-47 |
| Msa0016080 | Msa0088800 | 0.808216 | 3.454031e-50 | -8.615850e-47 |
| Msa0019470 | Msa0088800 | 0.804802 | 1.813300e-49 | -8.615850e-47 |
| Msa0024650 | Msa0088800 | 0.800266 | 1.561983e-48 | -8.615850e-47 |
| Msa0027020 | Msa0088800 | -0.801866 | 7.356184e-49 | -8.615850e-47 |
| Msa0041280 | Msa0088800 | 0.847105 | 1.427016e-59 | -8.615850e-47 |
| Msa0047660 | Msa0088800 | -0.807023 | 6.187648e-50 | -8.615850e-47 |
| Msa0066670 | Msa0088800 | 0.813566 | 2.399266e-51 | -8.615850e-47 |
| Msa0075080 | Msa0088800 | -0.813916 | 2.008954e-51 | -8.615850e-47 |
| Msa0088790 | Msa0088800 | 0.890118 | 1.315355e-73 | -8.615850e-47 |
| Msa0088800 | Msa0107830 | 0.805425 | 1.343159e-49 | -8.615850e-47 |
| Msa0088800 | Msa0117650 | 0.839357 | 1.663058e-57 | -8.615850e-47 |
| Msa0088800 | Msa0127350 | -0.804080 | 2.564338e-49 | -8.615850e-47 |
| Msa0088800 | Msa0135760 | 0.884544 | 1.751567e-71 | -8.615850e-47 |
| Msa0088800 | Msa0167160 | -0.800692 | 1.279227e-48 | -8.615850e-47 |
| Msa0088800 | Msa0167570 | -0.821847 | 3.247274e-53 | -8.615850e-47 |
| Msa0088800 | Msa0180380 | 0.944681 | 1.247255e-103 | -8.615850e-47 |
| Msa0088800 | Msa0185040 | 0.803600 | 3.226605e-49 | -8.615850e-47 |
| Msa0088800 | Msa0186240 | 0.809319 | 2.006866e-50 | -8.615850e-47 |
| Msa0088800 | Msa0225280 | -0.801815 | 7.535285e-49 | -8.615850e-47 |
| Msa0088800 | Msa0264710 | 0.822800 | 1.951303e-53 | -8.615850e-47 |
| Msa0088800 | Msa0266330 | -0.809214 | 2.113973e-50 | -8.615850e-47 |
| Msa0088800 | Msa0298820 | -0.812294 | 4.557833e-51 | -8.615850e-47 |
| Msa0088800 | Msa0302750 | 0.820016 | 8.571031e-53 | -8.615850e-47 |
| Msa0088800 | Msa0341950 | -0.808840 | 2.541905e-50 | -8.615850e-47 |
| Msa0088800 | Msa0382050 | -0.807088 | 5.995116e-50 | -8.615850e-47 |
| Msa0088800 | Msa0410710 | -0.805533 | 1.275184e-49 | -8.615850e-47 |
| Msa0088800 | Msa0419150 | -0.806284 | 8.862386e-50 | -8.615850e-47 |
| Msa0088800 | Msa0429840 | 0.803899 | 2.797094e-49 | -8.615850e-47 |
| Msa0088800 | Msa0431270 | -0.804684 | 1.919062e-49 | -8.615850e-47 |
| Msa0088800 | Msa0431550 | -0.808345 | 3.242037e-50 | -8.615850e-47 |
| Msa0088800 | Msa0434300 | 0.803285 | 3.750386e-49 | -8.615850e-47 |
| Msa0088800 | Msa0436810 | 0.804902 | 1.728150e-49 | -8.615850e-47 |
| Msa0088800 | Msa0444770 | -0.813047 | 3.119001e-51 | -8.615850e-47 |
| Msa0088800 | Msa0476560 | -0.816407 | 5.618258e-52 | -8.615850e-47 |
| Msa0088800 | Msa0492330 | -0.839651 | 1.395076e-57 | -8.615850e-47 |
| Msa0088800 | Msa0500910 | 0.806402 | 8.369562e-50 | -8.615850e-47 |
| Msa0088800 | Msa0520550 | -0.812861 | 3.425420e-51 | -8.615850e-47 |
| Msa0088800 | Msa0522140 | 0.809805 | 1.578246e-50 | -8.615850e-47 |
| Msa0088800 | Msa0522170 | 0.800833 | 1.197245e-48 | -8.615850e-47 |
| Msa0088800 | Msa0524710 | 0.806274 | 8.907347e-50 | -8.615850e-47 |
| Msa0088800 | Msa0557240 | 0.810268 | 1.254230e-50 | -8.615850e-47 |
| Msa0088800 | Msa0561450 | -0.804162 | 2.466263e-49 | -8.615850e-47 |
| Msa0088800 | Msa0577030 | 0.809338 | 1.988368e-50 | -8.615850e-47 |
| Msa0088800 | Msa0580890 | -0.809023 | 2.322554e-50 | -8.615850e-47 |
| Msa0088800 | Msa0597800 | 0.812617 | 3.874903e-51 | -8.615850e-47 |
| Msa0088800 | Msa0597820 | 0.810675 | 1.024393e-50 | -8.615850e-47 |
| Msa0088800 | Msa0603310 | 0.819629 | 1.050418e-52 | -8.615850e-47 |
| Msa0088800 | Msa0608250 | -0.812228 | 4.711873e-51 | -8.615850e-47 |
| Msa0088800 | Msa0615460 | -0.818618 | 1.784525e-52 | -8.615850e-47 |
| Msa0088800 | Msa0619030 | -0.804272 | 2.338861e-49 | -8.615850e-47 |
| Msa0088800 | Msa0637590 | 0.820854 | 5.505372e-53 | -8.615850e-47 |
| Msa0088800 | Msa0644340 | 0.833744 | 4.472210e-56 | -8.615850e-47 |
| Msa0088800 | Msa0654850 | -0.818361 | 2.040611e-52 | -8.615850e-47 |
| Msa0088800 | Msa0691320 | -0.805127 | 1.550890e-49 | -8.615850e-47 |
| Msa0088800 | Msa0695250 | -0.805736 | 1.155740e-49 | -8.615850e-47 |
| Msa0088800 | Msa0698510 | -0.817148 | 3.833208e-52 | -8.615850e-47 |
| Msa0088800 | Msa0698680 | -0.817282 | 3.574708e-52 | -8.615850e-47 |
| Msa0088800 | Msa0751490 | -0.800121 | 1.672396e-48 | -8.615850e-47 |
| Msa0088800 | Msa0753590 | -0.811209 | 7.849299e-51 | -8.615850e-47 |
| Msa0088800 | Msa0755550 | -0.800140 | 1.657224e-48 | -8.615850e-47 |
| Msa0088800 | Msa0792490 | -0.826085 | 3.291865e-54 | -8.615850e-47 |
| Msa0088800 | Msa0800120 | 0.804618 | 1.980933e-49 | -8.615850e-47 |
| Msa0088800 | Msa0800150 | 0.820308 | 7.346953e-53 | -8.615850e-47 |
| Msa0088800 | Msa0800180 | 0.803321 | 3.686273e-49 | -8.615850e-47 |
| Msa0088800 | Msa0833980 | -0.819783 | 9.688861e-53 | -8.615850e-47 |
| Msa0088800 | Msa0838210 | 0.810269 | 1.253501e-50 | -8.615850e-47 |
| Msa0088800 | Msa0892820 | -0.813451 | 2.542224e-51 | -8.615850e-47 |
| Msa0088800 | Msa0901270 | 0.816779 | 4.637717e-52 | -8.615850e-47 |
| Msa0088800 | Msa0903420 | 0.803619 | 3.198001e-49 | -8.615850e-47 |
| Msa0088800 | Msa0925940 | 0.840615 | 7.817747e-58 | -8.615850e-47 |
| Msa0088800 | Msa0945160 | -0.810637 | 1.044135e-50 | -8.615850e-47 |
| Msa0088800 | Msa0966590 | 0.820918 | 5.321659e-53 | -8.615850e-47 |
| Msa0088800 | Msa1001120 | 0.824100 | 9.692832e-54 | -8.615850e-47 |
| Msa0088800 | Msa1001930 | -0.818271 | 2.138986e-52 | -8.615850e-47 |
| Msa0088800 | Msa1001940 | -0.810466 | 1.136521e-50 | -8.615850e-47 |
| Msa0088800 | Msa1002550 | -0.822276 | 2.583533e-53 | -8.615850e-47 |
| Msa0088800 | Msa1041570 | -0.809195 | 2.133033e-50 | -8.615850e-47 |
| Msa0088800 | Msa1069250 | 0.800984 | 1.115012e-48 | -8.615850e-47 |
| Msa0088800 | Msa1081170 | 0.803080 | 4.134349e-49 | -8.615850e-47 |
| Msa0088800 | Msa1126320 | -0.809192 | 2.136651e-50 | -8.615850e-47 |
| Msa0088800 | Msa1126530 | 0.805321 | 1.412217e-49 | -8.615850e-47 |
| Msa0088800 | Msa1129510 | -0.801330 | 9.472634e-49 | -8.615850e-47 |
| Msa0088800 | Msa1130150 | -0.815077 | 1.112085e-51 | -8.615850e-47 |
| Msa0088800 | Msa1137750 | 0.800455 | 1.429972e-48 | -8.615850e-47 |
| Msa0088800 | Msa1146010 | 0.812631 | 3.846854e-51 | -8.615850e-47 |
| Msa0088800 | Msa1166470 | -0.807868 | 4.096985e-50 | -8.615850e-47 |
| Msa0088800 | Msa1203650 | 0.813310 | 2.731137e-51 | -8.615850e-47 |
| Msa0088800 | Msa1211610 | 0.803649 | 3.152620e-49 | -8.615850e-47 |
| Msa0088800 | Msa1215540 | -0.825228 | 5.256464e-54 | -8.615850e-47 |
| Msa0088800 | Msa1221270 | 0.805938 | 1.048325e-49 | -8.615850e-47 |
| Msa0088800 | Msa1225560 | 0.809392 | 1.935661e-50 | -8.615850e-47 |
| Msa0088800 | Msa1247200 | -0.802657 | 5.056013e-49 | -8.615850e-47 |
| Msa0088800 | Msa1256490 | -0.801762 | 7.727977e-49 | -8.615850e-47 |
| Msa0088800 | Msa1268360 | 0.807443 | 5.042581e-50 | -8.615850e-47 |
| Msa0088800 | Msa1268390 | 0.805357 | 1.388394e-49 | -8.615850e-47 |
| Msa0088800 | Msa1269200 | 0.805377 | 1.374595e-49 | -8.615850e-47 |
| Msa0088800 | Msa1303690 | -0.806127 | 9.565689e-50 | -8.615850e-47 |
| Msa0088800 | Msa1341710 | -0.803596 | 3.232236e-49 | -8.615850e-47 |
| Msa0088800 | Msa1350590 | -0.804761 | 1.849934e-49 | -8.615850e-47 |
| Msa0088800 | Msa1355540 | 0.818673 | 1.733579e-52 | -8.615850e-47 |
| Msa0088800 | Msa1363170 | -0.809710 | 1.654104e-50 | -8.615850e-47 |
| Msa0088800 | Msa1373930 | -0.825970 | 3.504668e-54 | -8.615850e-47 |
| Msa0088800 | Msa1388010 | -0.823611 | 1.261753e-53 | -8.615850e-47 |
| Msa0088800 | Msa1400830 | -0.801856 | 7.391665e-49 | -8.615850e-47 |
| Msa0088800 | Msa1404810 | -0.821280 | 4.391538e-53 | -8.615850e-47 |
| Msa0088800 | Msa1405040 | -0.806649 | 7.422754e-50 | -8.615850e-47 |
| Msa0088800 | Msa1407040 | 0.820785 | 5.709515e-53 | -8.615850e-47 |
| Msa0088800 | Msa1408230 | -0.812478 | 4.155393e-51 | -8.615850e-47 |
| Msa0088800 | Msa1415510 | -0.805894 | 1.070836e-49 | -8.615850e-47 |
| Msa0088800 | Msa1437590 | 0.808038 | 3.768577e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0088800 | MtrunA17_Chr1g0206651 | 94.841 | 252 | 13 | 0 | 1 | 252 | 1 | 252 | 0.0 | 500 |
| Msa0088800 | MtrunA17_Chr1g0206601 | 72.266 | 256 | 65 | 4 | 1 | 251 | 22 | 276 | 1.48e-134 | 380 |
| Msa0088800 | MtrunA17_Chr1g0206581 | 67.925 | 265 | 69 | 6 | 1 | 251 | 18 | 280 | 1.11e-125 | 358 |
| Msa0088800 | MtrunA17_Chr1g0154341 | 56.048 | 248 | 102 | 4 | 10 | 251 | 7 | 253 | 3.94e-93 | 275 |
| Msa0088800 | MtrunA17_Chr1g0154361 | 56.327 | 245 | 100 | 3 | 12 | 250 | 8 | 251 | 1.84e-92 | 275 |
| Msa0088800 | MtrunA17_Chr1g0206571 | 55.411 | 231 | 101 | 2 | 23 | 252 | 30 | 259 | 1.32e-85 | 257 |
| Msa0088800 | MtrunA17_Chr1g0154321 | 54.582 | 251 | 102 | 6 | 12 | 251 | 8 | 257 | 3.06e-85 | 269 |
| Msa0088800 | MtrunA17_Chr1g0154351 | 54.251 | 247 | 105 | 4 | 12 | 251 | 8 | 253 | 3.26e-84 | 264 |
| Msa0088800 | MtrunA17_Chr1g0154311 | 52.846 | 246 | 107 | 4 | 13 | 251 | 10 | 253 | 9.34e-80 | 253 |
| Msa0088800 | MtrunA17_Chr1g0206531 | 50.391 | 256 | 115 | 6 | 1 | 250 | 1 | 250 | 1.86e-77 | 246 |
| Msa0088800 | MtrunA17_Chr1g0154371 | 51.953 | 256 | 111 | 5 | 1 | 246 | 8 | 261 | 7.79e-76 | 242 |
| Msa0088800 | MtrunA17_Chr5g0428591 | 48.770 | 244 | 117 | 4 | 10 | 251 | 8 | 245 | 3.33e-74 | 227 |
| Msa0088800 | MtrunA17_Chr1g0206461 | 48.031 | 254 | 121 | 6 | 1 | 250 | 1 | 247 | 4.07e-71 | 229 |
| Msa0088800 | MtrunA17_Chr1g0206451 | 50.204 | 245 | 115 | 4 | 7 | 249 | 45 | 284 | 2.22e-66 | 218 |
| Msa0088800 | MtrunA17_Chr5g0428571 | 48.684 | 228 | 111 | 3 | 24 | 251 | 25 | 246 | 4.80e-66 | 214 |
| Msa0088800 | MtrunA17_Chr1g0206521 | 48.980 | 245 | 117 | 4 | 7 | 250 | 653 | 890 | 1.74e-63 | 214 |
| Msa0088800 | MtrunA17_Chr1g0206521 | 48.101 | 237 | 115 | 4 | 15 | 250 | 19 | 248 | 1.09e-59 | 203 |
| Msa0088800 | MtrunA17_Chr5g0428531 | 43.725 | 247 | 126 | 5 | 10 | 250 | 8 | 247 | 1.62e-61 | 195 |
| Msa0088800 | MtrunA17_Chr1g0206561 | 42.975 | 242 | 128 | 4 | 11 | 252 | 9 | 240 | 3.47e-56 | 190 |
| Msa0088800 | MtrunA17_Chr5g0426941 | 41.564 | 243 | 128 | 5 | 14 | 252 | 10 | 242 | 9.44e-53 | 181 |
| Msa0088800 | MtrunA17_Chr1g0206381 | 40.541 | 222 | 118 | 5 | 39 | 252 | 38 | 253 | 1.72e-49 | 165 |
| Msa0088800 | MtrunA17_Chr1g0206401 | 39.640 | 222 | 120 | 6 | 39 | 252 | 33 | 248 | 2.91e-45 | 160 |
| Msa0088800 | MtrunA17_Chr7g0234231 | 32.231 | 242 | 155 | 4 | 9 | 250 | 5 | 237 | 1.25e-40 | 140 |
| Msa0088800 | MtrunA17_Chr1g0206331 | 34.553 | 246 | 149 | 7 | 11 | 251 | 15 | 253 | 5.61e-35 | 132 |
| Msa0088800 | MtrunA17_Chr5g0428601 | 50.400 | 125 | 60 | 2 | 127 | 251 | 1 | 123 | 8.44e-34 | 125 |
| Msa0088800 | MtrunA17_Chr6g0475121 | 33.077 | 260 | 158 | 6 | 1 | 252 | 1 | 252 | 2.23e-32 | 124 |
| Msa0088800 | MtrunA17_Chr6g0475121 | 32.353 | 204 | 126 | 6 | 50 | 250 | 296 | 490 | 1.72e-22 | 95.9 |
| Msa0088800 | MtrunA17_Chr2g0323011 | 31.727 | 249 | 155 | 7 | 4 | 249 | 7 | 243 | 3.11e-32 | 118 |
| Msa0088800 | MtrunA17_Chr1g0205771 | 31.455 | 213 | 140 | 3 | 41 | 251 | 51 | 259 | 3.64e-31 | 121 |
| Msa0088800 | MtrunA17_Chr5g0394001 | 32.636 | 239 | 152 | 6 | 16 | 250 | 16 | 249 | 1.42e-30 | 119 |
| Msa0088800 | MtrunA17_Chr6g0474901 | 29.961 | 257 | 163 | 7 | 1 | 252 | 1 | 245 | 2.57e-29 | 116 |
| Msa0088800 | MtrunA17_Chr6g0474901 | 31.416 | 226 | 136 | 7 | 28 | 250 | 274 | 483 | 1.50e-22 | 96.3 |
| Msa0088800 | MtrunA17_Chr6g0475201 | 30.620 | 258 | 166 | 5 | 1 | 252 | 1 | 251 | 2.94e-29 | 115 |
| Msa0088800 | MtrunA17_Chr6g0475201 | 32.627 | 236 | 138 | 8 | 20 | 250 | 271 | 490 | 8.56e-27 | 108 |
| Msa0088800 | MtrunA17_Chr1g0206201 | 33.028 | 218 | 128 | 6 | 43 | 252 | 48 | 255 | 1.03e-28 | 110 |
| Msa0088800 | MtrunA17_Chr5g0393981 | 29.457 | 258 | 161 | 8 | 1 | 250 | 73 | 317 | 2.24e-28 | 113 |
| Msa0088800 | MtrunA17_Chr6g0475001 | 31.873 | 251 | 155 | 8 | 11 | 252 | 9 | 252 | 4.01e-28 | 112 |
| Msa0088800 | MtrunA17_Chr6g0475001 | 31.556 | 225 | 136 | 8 | 28 | 250 | 281 | 489 | 9.19e-19 | 85.1 |
| Msa0088800 | MtrunA17_Chr2g0322981 | 29.921 | 254 | 161 | 7 | 1 | 251 | 6 | 245 | 1.10e-27 | 106 |
| Msa0088800 | MtrunA17_Chr3g0081001 | 29.762 | 252 | 162 | 5 | 4 | 251 | 6 | 246 | 1.12e-27 | 111 |
| Msa0088800 | MtrunA17_Chr5g0394021 | 35.047 | 214 | 133 | 3 | 38 | 250 | 39 | 247 | 2.22e-27 | 110 |
| Msa0088800 | MtrunA17_Chr1g0206351 | 31.905 | 210 | 137 | 3 | 45 | 251 | 48 | 254 | 2.48e-27 | 110 |
| Msa0088800 | MtrunA17_Chr6g0474811 | 30.268 | 261 | 165 | 6 | 1 | 252 | 1 | 253 | 7.80e-27 | 108 |
| Msa0088800 | MtrunA17_Chr6g0474811 | 32.843 | 204 | 125 | 6 | 50 | 250 | 298 | 492 | 2.71e-20 | 89.7 |
| Msa0088800 | MtrunA17_Chr6g0474971 | 29.961 | 257 | 163 | 7 | 1 | 252 | 1 | 245 | 6.70e-26 | 103 |
| Msa0088800 | MtrunA17_Chr1g0206231 | 31.905 | 210 | 133 | 6 | 47 | 252 | 52 | 255 | 9.31e-26 | 105 |
| Msa0088800 | MtrunA17_Chr8g0347571 | 31.727 | 249 | 148 | 9 | 9 | 250 | 9 | 242 | 1.22e-25 | 105 |
| Msa0088800 | MtrunA17_Chr8g0347571 | 28.194 | 227 | 142 | 8 | 32 | 251 | 276 | 488 | 1.55e-16 | 79.0 |
| Msa0088800 | MtrunA17_Chr3g0081011 | 29.832 | 238 | 151 | 6 | 18 | 251 | 20 | 245 | 1.42e-25 | 105 |
| Msa0088800 | MtrunA17_Chr6g0474871 | 30.233 | 258 | 166 | 6 | 1 | 252 | 1 | 250 | 1.87e-25 | 104 |
| Msa0088800 | MtrunA17_Chr6g0474871 | 32.768 | 177 | 110 | 5 | 77 | 250 | 317 | 487 | 6.69e-19 | 85.9 |
| Msa0088800 | MtrunA17_Chr6g0475111 | 29.555 | 247 | 163 | 6 | 9 | 250 | 12 | 252 | 1.79e-24 | 102 |
| Msa0088800 | MtrunA17_Chr6g0475111 | 26.316 | 247 | 163 | 8 | 14 | 251 | 266 | 502 | 1.10e-17 | 82.4 |
| Msa0088800 | MtrunA17_Chr1g0206361 | 31.651 | 218 | 138 | 6 | 37 | 250 | 43 | 253 | 6.40e-24 | 100 |
| Msa0088800 | MtrunA17_Chr3g0081051 | 29.675 | 246 | 159 | 6 | 9 | 249 | 3 | 239 | 1.50e-23 | 95.9 |
| Msa0088800 | MtrunA17_Chr8g0354271 | 29.482 | 251 | 160 | 8 | 7 | 251 | 10 | 249 | 3.42e-23 | 98.2 |
| Msa0088800 | MtrunA17_Chr3g0081031 | 30.488 | 246 | 154 | 8 | 11 | 250 | 24 | 258 | 3.88e-23 | 98.2 |
| Msa0088800 | MtrunA17_Chr6g0475091 | 30.544 | 239 | 156 | 5 | 20 | 252 | 27 | 261 | 3.91e-23 | 98.2 |
| Msa0088800 | MtrunA17_Chr6g0475091 | 32.218 | 239 | 142 | 8 | 19 | 250 | 274 | 499 | 2.69e-20 | 89.7 |
| Msa0088800 | MtrunA17_Chr1g0206291 | 29.389 | 262 | 164 | 9 | 2 | 252 | 15 | 266 | 5.60e-22 | 94.4 |
| Msa0088800 | MtrunA17_Chr5g0394011 | 30.093 | 216 | 140 | 6 | 41 | 250 | 41 | 251 | 7.54e-22 | 94.4 |
| Msa0088800 | MtrunA17_Chr6g0474861 | 31.765 | 255 | 157 | 10 | 1 | 250 | 1 | 243 | 2.29e-21 | 92.8 |
| Msa0088800 | MtrunA17_Chr8g0354351 | 27.273 | 242 | 164 | 5 | 11 | 251 | 13 | 243 | 9.78e-21 | 90.9 |
| Msa0088800 | MtrunA17_Chr2g0280391 | 24.800 | 250 | 172 | 4 | 9 | 250 | 5 | 246 | 5.21e-19 | 84.0 |
| Msa0088800 | MtrunA17_Chr1g0206251 | 31.754 | 211 | 129 | 7 | 47 | 250 | 307 | 509 | 1.38e-18 | 84.7 |
| Msa0088800 | MtrunA17_Chr1g0206251 | 29.902 | 204 | 123 | 10 | 61 | 251 | 69 | 265 | 2.78e-13 | 68.9 |
| Msa0088800 | MtrunA17_Chr8g0354421 | 25.200 | 250 | 169 | 8 | 10 | 251 | 31 | 270 | 2.22e-17 | 81.3 |
| Msa0088800 | MtrunA17_Chr1g0206411 | 56.897 | 58 | 25 | 0 | 61 | 118 | 4 | 61 | 3.44e-17 | 74.3 |
| Msa0088800 | MtrunA17_Chr1g0206421 | 30.189 | 159 | 93 | 5 | 67 | 216 | 2 | 151 | 4.45e-17 | 80.1 |
| Msa0088800 | MtrunA17_Chr8g0354341 | 30.723 | 166 | 108 | 4 | 86 | 251 | 88 | 246 | 1.32e-16 | 77.0 |
| Msa0088800 | MtrunA17_Chr8g0354441 | 24.314 | 255 | 166 | 10 | 10 | 250 | 14 | 255 | 3.35e-16 | 77.8 |
| Msa0088800 | MtrunA17_Chr3g0119041 | 29.808 | 208 | 118 | 8 | 64 | 251 | 63 | 262 | 4.89e-16 | 77.4 |
| Msa0088800 | MtrunA17_Chr2g0280361 | 27.027 | 185 | 125 | 4 | 67 | 250 | 66 | 241 | 5.27e-16 | 75.5 |
| Msa0088800 | MtrunA17_Chr8g0354411 | 24.537 | 216 | 147 | 6 | 42 | 250 | 41 | 247 | 4.68e-15 | 73.6 |
| Msa0088800 | MtrunA17_Chr3g0082951 | 39.091 | 110 | 62 | 3 | 28 | 136 | 116 | 221 | 1.94e-13 | 67.8 |
| Msa0088800 | MtrunA17_Chr7g0230381 | 26.667 | 195 | 122 | 6 | 58 | 251 | 74 | 248 | 2.06e-13 | 68.2 |
| Msa0088800 | MtrunA17_Chr8g0354281 | 23.005 | 213 | 149 | 6 | 45 | 251 | 44 | 247 | 4.06e-13 | 68.6 |
| Msa0088800 | MtrunA17_Chr2g0280381 | 23.810 | 189 | 132 | 4 | 65 | 252 | 65 | 242 | 6.21e-12 | 63.9 |
| Msa0088800 | MtrunA17_Chr8g0354431 | 24.800 | 250 | 170 | 7 | 10 | 251 | 9 | 248 | 1.09e-11 | 64.3 |
| Msa0088800 | MtrunA17_Chr8g0391511 | 22.749 | 211 | 144 | 5 | 38 | 244 | 39 | 234 | 1.60e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0088800 | AT4G21410.2 | 38.532 | 218 | 127 | 4 | 37 | 251 | 38 | 251 | 2.34e-39 | 143 |
| Msa0088800 | AT4G21410.3 | 38.532 | 218 | 127 | 4 | 37 | 251 | 38 | 251 | 7.09e-39 | 143 |
| Msa0088800 | AT3G22060.1 | 33.473 | 239 | 152 | 4 | 15 | 252 | 19 | 251 | 6.11e-37 | 131 |
| Msa0088800 | AT4G38830.1 | 36.697 | 218 | 132 | 4 | 35 | 250 | 32 | 245 | 3.95e-36 | 135 |
| Msa0088800 | AT4G21400.3 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 9.68e-35 | 130 |
| Msa0088800 | AT4G21400.6 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 1.32e-34 | 130 |
| Msa0088800 | AT4G21400.4 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 1.32e-34 | 130 |
| Msa0088800 | AT4G21400.5 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 1.32e-34 | 130 |
| Msa0088800 | AT4G21400.2 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 2.25e-34 | 130 |
| Msa0088800 | AT4G21400.1 | 34.419 | 215 | 136 | 3 | 39 | 251 | 42 | 253 | 2.83e-34 | 130 |
| Msa0088800 | AT4G05200.2 | 35.060 | 251 | 148 | 8 | 5 | 250 | 26 | 266 | 4.55e-34 | 130 |
| Msa0088800 | AT4G05200.1 | 35.060 | 251 | 148 | 8 | 5 | 250 | 8 | 248 | 4.82e-34 | 129 |
| Msa0088800 | AT4G21230.1 | 37.443 | 219 | 118 | 7 | 37 | 250 | 37 | 241 | 1.23e-32 | 125 |
| Msa0088800 | AT4G23220.1 | 32.243 | 214 | 144 | 1 | 39 | 251 | 29 | 242 | 2.35e-32 | 125 |
| Msa0088800 | AT4G23160.1 | 36.441 | 236 | 134 | 8 | 21 | 250 | 37 | 262 | 2.89e-32 | 124 |
| Msa0088800 | AT4G23180.3 | 34.632 | 231 | 142 | 5 | 21 | 250 | 31 | 253 | 3.69e-32 | 123 |
| Msa0088800 | AT4G23160.3 | 36.441 | 236 | 134 | 8 | 21 | 250 | 617 | 842 | 5.04e-32 | 124 |
| Msa0088800 | AT4G23160.2 | 36.441 | 236 | 134 | 8 | 21 | 250 | 617 | 842 | 5.04e-32 | 124 |
| Msa0088800 | AT4G23180.2 | 34.632 | 231 | 142 | 5 | 21 | 250 | 31 | 253 | 6.24e-32 | 123 |
| Msa0088800 | AT4G23180.1 | 34.632 | 231 | 142 | 5 | 21 | 250 | 31 | 253 | 9.79e-32 | 123 |
| Msa0088800 | AT4G23170.1 | 35.443 | 237 | 135 | 9 | 21 | 250 | 20 | 245 | 1.37e-31 | 117 |
| Msa0088800 | AT4G23280.3 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 5.59e-31 | 120 |
| Msa0088800 | AT4G23280.2 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 6.04e-31 | 120 |
| Msa0088800 | AT4G23280.1 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 6.19e-31 | 120 |
| Msa0088800 | AT4G23200.2 | 31.308 | 214 | 142 | 2 | 41 | 249 | 30 | 243 | 7.09e-31 | 119 |
| Msa0088800 | AT4G23200.1 | 31.308 | 214 | 142 | 2 | 41 | 249 | 30 | 243 | 1.91e-30 | 119 |
| Msa0088800 | AT4G21400.7 | 36.000 | 175 | 108 | 2 | 78 | 251 | 56 | 227 | 2.70e-30 | 119 |
| Msa0088800 | AT4G23150.1 | 36.449 | 214 | 125 | 7 | 41 | 250 | 39 | 245 | 1.70e-29 | 116 |
| Msa0088800 | AT4G00970.2 | 37.838 | 185 | 105 | 5 | 66 | 246 | 79 | 257 | 6.77e-29 | 114 |
| Msa0088800 | AT4G00970.1 | 37.838 | 185 | 105 | 5 | 66 | 246 | 79 | 257 | 1.05e-28 | 114 |
| Msa0088800 | AT4G23130.3 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 2.00e-27 | 110 |
| Msa0088800 | AT4G23130.1 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 2.01e-27 | 110 |
| Msa0088800 | AT4G23130.2 | 35.238 | 210 | 125 | 6 | 45 | 251 | 44 | 245 | 2.29e-27 | 110 |
| Msa0088800 | AT4G23250.1 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 6.24e-27 | 109 |
| Msa0088800 | AT4G23250.3 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 6.34e-27 | 109 |
| Msa0088800 | AT4G23250.2 | 29.915 | 234 | 142 | 5 | 32 | 250 | 30 | 256 | 7.32e-27 | 109 |
| Msa0088800 | AT4G23250.2 | 26.471 | 204 | 125 | 4 | 47 | 250 | 741 | 919 | 5.66e-15 | 74.7 |
| Msa0088800 | AT4G23140.2 | 34.722 | 216 | 126 | 7 | 41 | 250 | 40 | 246 | 9.54e-27 | 108 |
| Msa0088800 | AT4G23140.1 | 34.722 | 216 | 126 | 7 | 41 | 250 | 40 | 246 | 1.12e-26 | 108 |
| Msa0088800 | AT4G23230.1 | 35.047 | 214 | 126 | 7 | 41 | 250 | 37 | 241 | 3.24e-26 | 107 |
| Msa0088800 | AT3G45860.1 | 35.185 | 216 | 123 | 6 | 41 | 250 | 43 | 247 | 2.78e-25 | 104 |
| Msa0088800 | AT4G20640.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20630.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20580.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20600.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20620.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20610.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G20590.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 4.23e-25 | 100 |
| Msa0088800 | AT4G23210.1 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 4.46e-25 | 103 |
| Msa0088800 | AT4G20670.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 7 | 255 | 5.09e-25 | 100 |
| Msa0088800 | AT4G20570.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G20560.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G20540.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G20645.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G20530.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G20550.1 | 30.980 | 255 | 162 | 7 | 5 | 251 | 21 | 269 | 5.22e-25 | 100 |
| Msa0088800 | AT4G23210.2 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 5.57e-25 | 103 |
| Msa0088800 | AT4G23210.4 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 5.57e-25 | 103 |
| Msa0088800 | AT4G23210.5 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 6.39e-25 | 103 |
| Msa0088800 | AT4G11460.1 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 6.43e-25 | 103 |
| Msa0088800 | AT4G11460.3 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 6.67e-25 | 103 |
| Msa0088800 | AT4G23210.3 | 29.084 | 251 | 156 | 6 | 12 | 249 | 9 | 250 | 6.94e-25 | 103 |
| Msa0088800 | AT5G48540.1 | 29.098 | 244 | 158 | 6 | 11 | 250 | 9 | 241 | 9.16e-25 | 99.4 |
| Msa0088800 | AT4G23300.1 | 28.761 | 226 | 143 | 4 | 37 | 249 | 30 | 250 | 2.00e-24 | 102 |
| Msa0088800 | AT4G11530.1 | 27.727 | 220 | 147 | 3 | 39 | 249 | 30 | 246 | 2.15e-24 | 102 |
| Msa0088800 | AT3G21990.1 | 30.612 | 245 | 157 | 6 | 13 | 251 | 18 | 255 | 3.77e-24 | 97.8 |
| Msa0088800 | AT4G23270.2 | 31.837 | 245 | 153 | 7 | 10 | 250 | 6 | 240 | 5.81e-24 | 100 |
| Msa0088800 | AT4G23270.1 | 31.837 | 245 | 153 | 7 | 10 | 250 | 6 | 240 | 5.81e-24 | 100 |
| Msa0088800 | AT4G23270.3 | 31.837 | 245 | 153 | 7 | 10 | 250 | 6 | 240 | 5.93e-24 | 100 |
| Msa0088800 | AT4G23240.1 | 30.918 | 207 | 138 | 3 | 47 | 250 | 41 | 245 | 7.06e-24 | 100 |
| Msa0088800 | AT4G23310.2 | 34.286 | 210 | 124 | 7 | 45 | 250 | 156 | 355 | 7.26e-24 | 100 |
| Msa0088800 | AT2G31620.1 | 29.817 | 218 | 144 | 4 | 36 | 249 | 40 | 252 | 7.57e-24 | 97.1 |
| Msa0088800 | AT4G23310.1 | 34.450 | 209 | 125 | 6 | 45 | 250 | 156 | 355 | 7.87e-24 | 100 |
| Msa0088800 | AT4G11521.1 | 27.273 | 231 | 154 | 3 | 27 | 249 | 17 | 241 | 1.81e-23 | 96.3 |
| Msa0088800 | AT3G58310.1 | 28.807 | 243 | 159 | 6 | 15 | 252 | 23 | 256 | 2.67e-23 | 95.5 |
| Msa0088800 | AT4G23190.2 | 28.959 | 221 | 147 | 4 | 37 | 249 | 30 | 248 | 2.84e-23 | 98.6 |
| Msa0088800 | AT4G23190.1 | 28.959 | 221 | 147 | 4 | 37 | 249 | 30 | 248 | 2.93e-23 | 99.0 |
| Msa0088800 | AT4G11490.1 | 28.440 | 218 | 146 | 3 | 10 | 222 | 8 | 220 | 2.02e-21 | 93.6 |
| Msa0088800 | AT1G61750.1 | 29.680 | 219 | 147 | 4 | 29 | 245 | 28 | 241 | 2.40e-21 | 91.7 |
| Msa0088800 | AT4G04500.2 | 29.384 | 211 | 134 | 5 | 55 | 252 | 47 | 255 | 3.59e-21 | 92.4 |
| Msa0088800 | AT4G04500.3 | 29.384 | 211 | 134 | 5 | 55 | 252 | 47 | 255 | 3.59e-21 | 92.4 |
| Msa0088800 | AT4G04500.1 | 29.384 | 211 | 134 | 5 | 55 | 252 | 47 | 255 | 5.56e-21 | 92.0 |
| Msa0088800 | AT4G21410.1 | 42.520 | 127 | 70 | 2 | 127 | 251 | 1 | 126 | 6.82e-21 | 91.7 |
| Msa0088800 | AT3G21960.1 | 29.730 | 222 | 144 | 5 | 36 | 251 | 46 | 261 | 1.72e-20 | 88.2 |
| Msa0088800 | AT4G21400.8 | 38.889 | 126 | 76 | 1 | 127 | 251 | 1 | 126 | 1.83e-20 | 90.5 |
| Msa0088800 | AT3G21910.1 | 28.916 | 249 | 158 | 9 | 13 | 249 | 24 | 265 | 6.75e-20 | 86.7 |
| Msa0088800 | AT4G23260.2 | 26.009 | 223 | 158 | 3 | 32 | 249 | 30 | 250 | 7.78e-20 | 89.0 |
| Msa0088800 | AT4G23260.1 | 26.009 | 223 | 158 | 3 | 32 | 249 | 30 | 250 | 9.02e-20 | 88.6 |
| Msa0088800 | AT4G23290.2 | 28.959 | 221 | 143 | 7 | 38 | 249 | 31 | 246 | 8.49e-19 | 85.9 |
| Msa0088800 | AT5G41290.1 | 28.708 | 209 | 139 | 7 | 43 | 247 | 42 | 244 | 1.13e-18 | 83.6 |
| Msa0088800 | AT3G21940.2 | 34.973 | 183 | 96 | 6 | 88 | 252 | 3 | 180 | 1.20e-18 | 81.3 |
| Msa0088800 | AT4G04570.2 | 26.761 | 213 | 148 | 3 | 45 | 250 | 40 | 251 | 2.74e-18 | 84.3 |
| Msa0088800 | AT4G11480.2 | 22.439 | 205 | 157 | 2 | 45 | 249 | 36 | 238 | 2.88e-18 | 84.0 |
| Msa0088800 | AT4G04570.1 | 26.761 | 213 | 148 | 3 | 45 | 250 | 40 | 251 | 3.04e-18 | 84.3 |
| Msa0088800 | AT4G11480.4 | 22.549 | 204 | 156 | 2 | 46 | 249 | 37 | 238 | 3.46e-18 | 84.0 |
| Msa0088800 | AT4G11480.3 | 22.549 | 204 | 156 | 2 | 46 | 249 | 37 | 238 | 3.74e-18 | 84.0 |
| Msa0088800 | AT4G11480.1 | 22.549 | 204 | 156 | 2 | 46 | 249 | 37 | 238 | 4.16e-18 | 84.0 |
| Msa0088800 | AT3G21940.1 | 32.636 | 239 | 125 | 11 | 36 | 252 | 51 | 275 | 4.93e-18 | 81.6 |
| Msa0088800 | AT1G63600.1 | 28.796 | 191 | 114 | 4 | 67 | 245 | 72 | 252 | 8.03e-18 | 81.6 |
| Msa0088800 | AT4G11460.2 | 30.114 | 176 | 113 | 4 | 83 | 249 | 1 | 175 | 8.20e-18 | 82.8 |
| Msa0088800 | AT1G70690.1 | 26.087 | 253 | 158 | 10 | 1 | 245 | 2 | 233 | 1.99e-17 | 80.1 |
| Msa0088800 | AT3G21920.1 | 28.125 | 256 | 153 | 10 | 13 | 249 | 24 | 267 | 4.07e-17 | 79.0 |
| Msa0088800 | AT3G21920.2 | 28.125 | 256 | 153 | 10 | 13 | 249 | 46 | 289 | 6.14e-17 | 79.0 |
| Msa0088800 | AT3G22010.1 | 28.261 | 230 | 136 | 9 | 38 | 252 | 48 | 263 | 6.60e-17 | 78.2 |
| Msa0088800 | AT4G23190.3 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 9.49e-17 | 79.7 |
| Msa0088800 | AT4G23190.4 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 9.49e-17 | 79.7 |
| Msa0088800 | AT3G29040.1 | 29.435 | 248 | 157 | 8 | 12 | 249 | 13 | 252 | 1.06e-16 | 77.4 |
| Msa0088800 | AT1G63570.3 | 27.513 | 189 | 116 | 3 | 68 | 246 | 64 | 241 | 1.27e-16 | 77.8 |
| Msa0088800 | AT1G63570.1 | 27.513 | 189 | 116 | 3 | 68 | 246 | 64 | 241 | 1.27e-16 | 77.8 |
| Msa0088800 | AT4G11470.1 | 26.761 | 213 | 143 | 6 | 47 | 250 | 38 | 246 | 1.61e-16 | 79.0 |
| Msa0088800 | AT4G11470.2 | 26.761 | 213 | 143 | 6 | 47 | 250 | 43 | 251 | 1.68e-16 | 79.0 |
| Msa0088800 | AT1G63570.2 | 27.513 | 189 | 116 | 3 | 68 | 246 | 117 | 294 | 1.80e-16 | 78.2 |
| Msa0088800 | AT3G21930.1 | 27.734 | 256 | 154 | 10 | 13 | 249 | 24 | 267 | 1.86e-16 | 77.4 |
| Msa0088800 | AT1G63550.1 | 24.255 | 235 | 145 | 5 | 26 | 246 | 30 | 245 | 1.97e-16 | 77.8 |
| Msa0088800 | AT4G04540.3 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 2.16e-16 | 78.6 |
| Msa0088800 | AT4G04540.4 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 2.37e-16 | 78.6 |
| Msa0088800 | AT4G04540.2 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 2.62e-16 | 78.6 |
| Msa0088800 | AT4G04540.1 | 24.889 | 225 | 154 | 6 | 39 | 250 | 32 | 254 | 2.82e-16 | 78.6 |
| Msa0088800 | AT3G22040.1 | 27.734 | 256 | 156 | 10 | 12 | 252 | 16 | 257 | 6.12e-16 | 75.5 |
| Msa0088800 | AT4G04510.2 | 26.244 | 221 | 146 | 4 | 41 | 250 | 36 | 250 | 1.56e-15 | 76.3 |
| Msa0088800 | AT4G04510.1 | 26.244 | 221 | 146 | 4 | 41 | 250 | 34 | 248 | 1.58e-15 | 76.3 |
| Msa0088800 | AT4G04490.1 | 28.017 | 232 | 144 | 9 | 29 | 249 | 27 | 246 | 2.67e-15 | 75.5 |
| Msa0088800 | AT5G41280.1 | 26.230 | 183 | 126 | 4 | 68 | 246 | 67 | 244 | 2.81e-15 | 73.9 |
| Msa0088800 | AT3G21970.1 | 28.175 | 252 | 158 | 10 | 12 | 249 | 19 | 261 | 6.07e-15 | 72.8 |
| Msa0088800 | AT4G20680.1 | 28.444 | 225 | 144 | 8 | 39 | 252 | 49 | 267 | 6.36e-15 | 72.8 |
| Msa0088800 | AT3G22050.1 | 29.293 | 198 | 110 | 7 | 67 | 249 | 73 | 255 | 7.67e-15 | 72.4 |
| Msa0088800 | AT3G29050.2 | 28.352 | 261 | 154 | 10 | 13 | 249 | 22 | 273 | 1.17e-14 | 72.4 |
| Msa0088800 | AT3G22000.1 | 28.696 | 230 | 137 | 10 | 39 | 252 | 49 | 267 | 2.88e-14 | 71.2 |
| Msa0088800 | AT5G41300.1 | 25.210 | 238 | 168 | 5 | 10 | 244 | 15 | 245 | 5.12e-14 | 70.5 |
| Msa0088800 | AT3G21900.2 | 26.291 | 213 | 147 | 5 | 37 | 249 | 45 | 247 | 9.23e-14 | 69.3 |
| Msa0088800 | AT2G01660.2 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.08e-13 | 69.3 |
| Msa0088800 | AT1G63580.1 | 25.000 | 212 | 137 | 4 | 46 | 245 | 36 | 237 | 1.20e-13 | 69.3 |
| Msa0088800 | AT2G01660.1 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.26e-13 | 69.3 |
| Msa0088800 | AT2G01660.3 | 26.744 | 258 | 151 | 11 | 1 | 247 | 2 | 232 | 1.36e-13 | 69.3 |
| Msa0088800 | AT1G63590.1 | 26.000 | 200 | 125 | 6 | 59 | 245 | 55 | 244 | 1.54e-13 | 68.9 |
| Msa0088800 | AT5G37660.1 | 23.770 | 244 | 156 | 9 | 11 | 246 | 16 | 237 | 7.34e-11 | 61.6 |
| Msa0088800 | AT5G37660.2 | 23.605 | 233 | 152 | 8 | 18 | 246 | 27 | 237 | 7.81e-11 | 61.6 |
Find 41 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTTGGTACAATATTT+TGG | 0.104488 | 1_2:+69932884 | None:intergenic |
| TATTCAGACCGTTCGATATT+AGG | 0.205684 | 1_2:-69933166 | Msa0088800:CDS |
| TGCTTTAGGTTTGATAGAAT+TGG | 0.336798 | 1_2:+69932813 | None:intergenic |
| GGTTTACTTTGTCCTCGTTT+TGG | 0.340580 | 1_2:+69933332 | None:intergenic |
| ATGAGAAGGAGGAAGGAATA+TGG | 0.349250 | 1_2:+69933532 | None:intergenic |
| AGACATTTGCGACAATCTTC+AGG | 0.362672 | 1_2:+69933280 | None:intergenic |
| GGTTTCTACAATACAAATTA+CGG | 0.363088 | 1_2:-69933355 | Msa0088800:CDS |
| AGTAGTGATCAAACAATATA+TGG | 0.388142 | 1_2:-69932980 | Msa0088800:CDS |
| TGGACATGCTTGTGTTAGAT+AGG | 0.389375 | 1_2:+69933243 | None:intergenic |
| AAATATTGTACCAACAAGAT+TGG | 0.404642 | 1_2:-69932881 | Msa0088800:CDS |
| AATTCTACAACCAATCTTGT+TGG | 0.410248 | 1_2:+69932871 | None:intergenic |
| TTAGAGCAAGCTGTTATTTG+AGG | 0.415196 | 1_2:-69932847 | Msa0088800:CDS |
| AAATGTGGCCTGCTATAATT+TGG | 0.425646 | 1_2:-69933135 | Msa0088800:CDS |
| ACAGTGTACACCTGATTTGT+CGG | 0.437811 | 1_2:-69932951 | Msa0088800:CDS |
| CCAAACAGAAAAGAAGCAAT+TGG | 0.439075 | 1_2:-69933223 | Msa0088800:CDS |
| CGTTTACTTTAGATGTGAAA+AGG | 0.440701 | 1_2:+69933506 | None:intergenic |
| CACTGTGAAACCGACAAATC+AGG | 0.458317 | 1_2:+69932941 | None:intergenic |
| GAATGTGAACAATGCAACTT+TGG | 0.483957 | 1_2:-69933110 | Msa0088800:CDS |
| TATATTGTTTGATCACTACT+AGG | 0.502209 | 1_2:+69932983 | None:intergenic |
| GAGGACAAAGTAAACCTCAT+TGG | 0.502261 | 1_2:-69933325 | Msa0088800:CDS |
| TATGCTGCAGGAACTTTGCC+AGG | 0.503711 | 1_2:-69933007 | Msa0088800:CDS |
| TTCAACTCAAAAGTTAACTA+CGG | 0.507432 | 1_2:-69933376 | Msa0088800:CDS |
| GATAGAGGCGACTACATAAC+CGG | 0.514752 | 1_2:-69933445 | Msa0088800:CDS |
| GTTGTTATGGTAGGTACTAC+CGG | 0.518720 | 1_2:+69933426 | None:intergenic |
| AAGGATTATGAGAAGGAGGA+AGG | 0.529566 | 1_2:+69933525 | None:intergenic |
| ACATTCCACCAAATTATAGC+AGG | 0.535057 | 1_2:+69933127 | None:intergenic |
| TGAAAAGGATTATGAGAAGG+AGG | 0.542640 | 1_2:+69933521 | None:intergenic |
| TCACATCGTAAGTATGCTGC+AGG | 0.560986 | 1_2:-69933019 | Msa0088800:CDS |
| TAGTGTGGTGAAACAATTGT+TGG | 0.565498 | 1_2:-69933074 | Msa0088800:CDS |
| ATGTGAAAAGGATTATGAGA+AGG | 0.570955 | 1_2:+69933518 | None:intergenic |
| TGTGGCCTGCTATAATTTGG+TGG | 0.578852 | 1_2:-69933132 | Msa0088800:CDS |
| GGCAGATCAATTCAATAGTG+TGG | 0.581827 | 1_2:-69933089 | Msa0088800:CDS |
| CTCCTCTACATATTCCAATG+AGG | 0.587463 | 1_2:+69933311 | None:intergenic |
| CGCTGAGGCCTAATATCGAA+CGG | 0.598988 | 1_2:+69933158 | None:intergenic |
| AACCTCATTGGAATATGTAG+AGG | 0.614721 | 1_2:-69933313 | Msa0088800:CDS |
| ACAGAAAAGAAGCAATTGGA+TGG | 0.618085 | 1_2:-69933219 | Msa0088800:CDS |
| GTTTGATCACTACTAGGACC+TGG | 0.622316 | 1_2:+69932989 | None:intergenic |
| TATTAGGCCTCAGCGAAATG+TGG | 0.638853 | 1_2:-69933150 | Msa0088800:CDS |
| TACAAATTACGGCCAAAACG+AGG | 0.648241 | 1_2:-69933344 | Msa0088800:CDS |
| AGAAGCAATTGGATGGTACG+AGG | 0.694836 | 1_2:-69933212 | Msa0088800:CDS |
| TAGCAGGCCACATTTCGCTG+AGG | 0.701616 | 1_2:+69933143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTATTTTTGTCACATAAAT+AGG | + | chr1_2:69932905-69932924 | None:intergenic | 20.0% |
| !!! | GTTATTTTTGTCACATAAAT+AGG | + | chr1_2:69932905-69932924 | None:intergenic | 20.0% |
| ! | TTCAACTCAAAAGTTAACTA+CGG | - | chr1_2:69932994-69933013 | Msa0088800:CDS | 25.0% |
| ! | GGTTTCTACAATACAAATTA+CGG | - | chr1_2:69933015-69933034 | Msa0088800:CDS | 25.0% |
| ! | TTAAAAAACAAGGCTAGAAA+TGG | - | chr1_2:69933324-69933343 | Msa0088800:CDS | 25.0% |
| ! | TATATTGTTTGATCACTACT+AGG | + | chr1_2:69933390-69933409 | None:intergenic | 25.0% |
| ! | AGTAGTGATCAAACAATATA+TGG | - | chr1_2:69933390-69933409 | Msa0088800:CDS | 25.0% |
| !! | TCTTGTTGGTACAATATTTT+GGG | + | chr1_2:69933488-69933507 | None:intergenic | 25.0% |
| !! | ATCTTGTTGGTACAATATTT+TGG | + | chr1_2:69933489-69933508 | None:intergenic | 25.0% |
| ! | AAATATTGTACCAACAAGAT+TGG | - | chr1_2:69933489-69933508 | Msa0088800:CDS | 25.0% |
| ! | TTCAACTCAAAAGTTAACTA+CGG | - | chr1_2:69932994-69933013 | Msa0088800:CDS | 25.0% |
| ! | GGTTTCTACAATACAAATTA+CGG | - | chr1_2:69933015-69933034 | Msa0088800:CDS | 25.0% |
| ! | TTAAAAAACAAGGCTAGAAA+TGG | - | chr1_2:69933324-69933343 | Msa0088800:CDS | 25.0% |
| ! | TATATTGTTTGATCACTACT+AGG | + | chr1_2:69933390-69933409 | None:intergenic | 25.0% |
| ! | AGTAGTGATCAAACAATATA+TGG | - | chr1_2:69933390-69933409 | Msa0088800:CDS | 25.0% |
| !! | TCTTGTTGGTACAATATTTT+GGG | + | chr1_2:69933488-69933507 | None:intergenic | 25.0% |
| !! | ATCTTGTTGGTACAATATTT+TGG | + | chr1_2:69933489-69933508 | None:intergenic | 25.0% |
| ! | AAATATTGTACCAACAAGAT+TGG | - | chr1_2:69933489-69933508 | Msa0088800:CDS | 25.0% |
| ATGTGAAAAGGATTATGAGA+AGG | + | chr1_2:69932855-69932874 | None:intergenic | 30.0% | |
| CGTTTACTTTAGATGTGAAA+AGG | + | chr1_2:69932867-69932886 | None:intergenic | 30.0% | |
| TGTGACAAAAATAACGATAG+AGG | - | chr1_2:69932910-69932929 | Msa0088800:CDS | 30.0% | |
| !!! | TAACTTTTGAGTTGAAAGTC+AGG | + | chr1_2:69932990-69933009 | None:intergenic | 30.0% |
| GTTGGACGATTTAAAAAACA+AGG | - | chr1_2:69933314-69933333 | Msa0088800:CDS | 30.0% | |
| AATTCTACAACCAATCTTGT+TGG | + | chr1_2:69933502-69933521 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATTATGAGA+AGG | + | chr1_2:69932855-69932874 | None:intergenic | 30.0% | |
| CGTTTACTTTAGATGTGAAA+AGG | + | chr1_2:69932867-69932886 | None:intergenic | 30.0% | |
| TGTGACAAAAATAACGATAG+AGG | - | chr1_2:69932910-69932929 | Msa0088800:CDS | 30.0% | |
| !!! | TAACTTTTGAGTTGAAAGTC+AGG | + | chr1_2:69932990-69933009 | None:intergenic | 30.0% |
| GTTGGACGATTTAAAAAACA+AGG | - | chr1_2:69933314-69933333 | Msa0088800:CDS | 30.0% | |
| AATTCTACAACCAATCTTGT+TGG | + | chr1_2:69933502-69933521 | None:intergenic | 30.0% | |
| TGAAAAGGATTATGAGAAGG+AGG | + | chr1_2:69932852-69932871 | None:intergenic | 35.0% | |
| !!! | GATTTTGAGGTTGTTATGGT+AGG | + | chr1_2:69932956-69932975 | None:intergenic | 35.0% |
| !!! | AAGCGATTTTGAGGTTGTTA+TGG | + | chr1_2:69932960-69932979 | None:intergenic | 35.0% |
| ! | GGTATATGAAAGCGATTTTG+AGG | + | chr1_2:69932969-69932988 | None:intergenic | 35.0% |
| AACCTCATTGGAATATGTAG+AGG | - | chr1_2:69933057-69933076 | Msa0088800:CDS | 35.0% | |
| ! | CCAATTGCTTCTTTTCTGTT+TGG | + | chr1_2:69933150-69933169 | None:intergenic | 35.0% |
| CCAAACAGAAAAGAAGCAAT+TGG | - | chr1_2:69933147-69933166 | Msa0088800:CDS | 35.0% | |
| ACAGAAAAGAAGCAATTGGA+TGG | - | chr1_2:69933151-69933170 | Msa0088800:CDS | 35.0% | |
| TATTCAGACCGTTCGATATT+AGG | - | chr1_2:69933204-69933223 | Msa0088800:CDS | 35.0% | |
| AAATGTGGCCTGCTATAATT+TGG | - | chr1_2:69933235-69933254 | Msa0088800:CDS | 35.0% | |
| ACATTCCACCAAATTATAGC+AGG | + | chr1_2:69933246-69933265 | None:intergenic | 35.0% | |
| GAATGTGAACAATGCAACTT+TGG | - | chr1_2:69933260-69933279 | Msa0088800:CDS | 35.0% | |
| TAGTGTGGTGAAACAATTGT+TGG | - | chr1_2:69933296-69933315 | Msa0088800:CDS | 35.0% | |
| ! | TTAGAGCAAGCTGTTATTTG+AGG | - | chr1_2:69933523-69933542 | Msa0088800:CDS | 35.0% |
| TGAAAAGGATTATGAGAAGG+AGG | + | chr1_2:69932852-69932871 | None:intergenic | 35.0% | |
| !!! | GATTTTGAGGTTGTTATGGT+AGG | + | chr1_2:69932956-69932975 | None:intergenic | 35.0% |
| !!! | AAGCGATTTTGAGGTTGTTA+TGG | + | chr1_2:69932960-69932979 | None:intergenic | 35.0% |
| ! | GGTATATGAAAGCGATTTTG+AGG | + | chr1_2:69932969-69932988 | None:intergenic | 35.0% |
| AACCTCATTGGAATATGTAG+AGG | - | chr1_2:69933057-69933076 | Msa0088800:CDS | 35.0% | |
| ! | CCAATTGCTTCTTTTCTGTT+TGG | + | chr1_2:69933150-69933169 | None:intergenic | 35.0% |
| CCAAACAGAAAAGAAGCAAT+TGG | - | chr1_2:69933147-69933166 | Msa0088800:CDS | 35.0% | |
| ACAGAAAAGAAGCAATTGGA+TGG | - | chr1_2:69933151-69933170 | Msa0088800:CDS | 35.0% | |
| TATTCAGACCGTTCGATATT+AGG | - | chr1_2:69933204-69933223 | Msa0088800:CDS | 35.0% | |
| AAATGTGGCCTGCTATAATT+TGG | - | chr1_2:69933235-69933254 | Msa0088800:CDS | 35.0% | |
| ACATTCCACCAAATTATAGC+AGG | + | chr1_2:69933246-69933265 | None:intergenic | 35.0% | |
| GAATGTGAACAATGCAACTT+TGG | - | chr1_2:69933260-69933279 | Msa0088800:CDS | 35.0% | |
| TAGTGTGGTGAAACAATTGT+TGG | - | chr1_2:69933296-69933315 | Msa0088800:CDS | 35.0% | |
| ! | TTAGAGCAAGCTGTTATTTG+AGG | - | chr1_2:69933523-69933542 | Msa0088800:CDS | 35.0% |
| ATGAGAAGGAGGAAGGAATA+TGG | + | chr1_2:69932841-69932860 | None:intergenic | 40.0% | |
| AAGGATTATGAGAAGGAGGA+AGG | + | chr1_2:69932848-69932867 | None:intergenic | 40.0% | |
| GTTGTTATGGTAGGTACTAC+CGG | + | chr1_2:69932947-69932966 | None:intergenic | 40.0% | |
| TACAAATTACGGCCAAAACG+AGG | - | chr1_2:69933026-69933045 | Msa0088800:CDS | 40.0% | |
| ! | GGTTTACTTTGTCCTCGTTT+TGG | + | chr1_2:69933041-69933060 | None:intergenic | 40.0% |
| GAGGACAAAGTAAACCTCAT+TGG | - | chr1_2:69933045-69933064 | Msa0088800:CDS | 40.0% | |
| CTCCTCTACATATTCCAATG+AGG | + | chr1_2:69933062-69933081 | None:intergenic | 40.0% | |
| AGACATTTGCGACAATCTTC+AGG | + | chr1_2:69933093-69933112 | None:intergenic | 40.0% | |
| TGGACATGCTTGTGTTAGAT+AGG | + | chr1_2:69933130-69933149 | None:intergenic | 40.0% | |
| GGCAGATCAATTCAATAGTG+TGG | - | chr1_2:69933281-69933300 | Msa0088800:CDS | 40.0% | |
| ! | ACAGTGTACACCTGATTTGT+CGG | - | chr1_2:69933419-69933438 | Msa0088800:CDS | 40.0% |
| ATGAGAAGGAGGAAGGAATA+TGG | + | chr1_2:69932841-69932860 | None:intergenic | 40.0% | |
| AAGGATTATGAGAAGGAGGA+AGG | + | chr1_2:69932848-69932867 | None:intergenic | 40.0% | |
| GTTGTTATGGTAGGTACTAC+CGG | + | chr1_2:69932947-69932966 | None:intergenic | 40.0% | |
| TACAAATTACGGCCAAAACG+AGG | - | chr1_2:69933026-69933045 | Msa0088800:CDS | 40.0% | |
| ! | GGTTTACTTTGTCCTCGTTT+TGG | + | chr1_2:69933041-69933060 | None:intergenic | 40.0% |
| GAGGACAAAGTAAACCTCAT+TGG | - | chr1_2:69933045-69933064 | Msa0088800:CDS | 40.0% | |
| CTCCTCTACATATTCCAATG+AGG | + | chr1_2:69933062-69933081 | None:intergenic | 40.0% | |
| AGACATTTGCGACAATCTTC+AGG | + | chr1_2:69933093-69933112 | None:intergenic | 40.0% | |
| TGGACATGCTTGTGTTAGAT+AGG | + | chr1_2:69933130-69933149 | None:intergenic | 40.0% | |
| GGCAGATCAATTCAATAGTG+TGG | - | chr1_2:69933281-69933300 | Msa0088800:CDS | 40.0% | |
| ! | ACAGTGTACACCTGATTTGT+CGG | - | chr1_2:69933419-69933438 | Msa0088800:CDS | 40.0% |
| GATAGAGGCGACTACATAAC+CGG | - | chr1_2:69932925-69932944 | Msa0088800:CDS | 45.0% | |
| AGAAGCAATTGGATGGTACG+AGG | - | chr1_2:69933158-69933177 | Msa0088800:CDS | 45.0% | |
| TATTAGGCCTCAGCGAAATG+TGG | - | chr1_2:69933220-69933239 | Msa0088800:CDS | 45.0% | |
| TGTGGCCTGCTATAATTTGG+TGG | - | chr1_2:69933238-69933257 | Msa0088800:CDS | 45.0% | |
| TCACATCGTAAGTATGCTGC+AGG | - | chr1_2:69933351-69933370 | Msa0088800:CDS | 45.0% | |
| GTTTGATCACTACTAGGACC+TGG | + | chr1_2:69933384-69933403 | None:intergenic | 45.0% | |
| CACTGTGAAACCGACAAATC+AGG | + | chr1_2:69933432-69933451 | None:intergenic | 45.0% | |
| GATAGAGGCGACTACATAAC+CGG | - | chr1_2:69932925-69932944 | Msa0088800:CDS | 45.0% | |
| AGAAGCAATTGGATGGTACG+AGG | - | chr1_2:69933158-69933177 | Msa0088800:CDS | 45.0% | |
| TATTAGGCCTCAGCGAAATG+TGG | - | chr1_2:69933220-69933239 | Msa0088800:CDS | 45.0% | |
| TGTGGCCTGCTATAATTTGG+TGG | - | chr1_2:69933238-69933257 | Msa0088800:CDS | 45.0% | |
| TCACATCGTAAGTATGCTGC+AGG | - | chr1_2:69933351-69933370 | Msa0088800:CDS | 45.0% | |
| GTTTGATCACTACTAGGACC+TGG | + | chr1_2:69933384-69933403 | None:intergenic | 45.0% | |
| CACTGTGAAACCGACAAATC+AGG | + | chr1_2:69933432-69933451 | None:intergenic | 45.0% | |
| CGCTGAGGCCTAATATCGAA+CGG | + | chr1_2:69933215-69933234 | None:intergenic | 50.0% | |
| TATGCTGCAGGAACTTTGCC+AGG | - | chr1_2:69933363-69933382 | Msa0088800:CDS | 50.0% | |
| CGCTGAGGCCTAATATCGAA+CGG | + | chr1_2:69933215-69933234 | None:intergenic | 50.0% | |
| TATGCTGCAGGAACTTTGCC+AGG | - | chr1_2:69933363-69933382 | Msa0088800:CDS | 50.0% | |
| TAGCAGGCCACATTTCGCTG+AGG | + | chr1_2:69933230-69933249 | None:intergenic | 55.0% | |
| TAGCAGGCCACATTTCGCTG+AGG | + | chr1_2:69933230-69933249 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 69932817 | 69933575 | 69932817 | ID=Msa0088800;Name=Msa0088800 |
| chr1_2 | mRNA | 69932817 | 69933575 | 69932817 | ID=Msa0088800-mRNA-1;Parent=Msa0088800;Name=Msa0088800-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|252 |
| chr1_2 | exon | 69932817 | 69933575 | 69932817 | ID=Msa0088800-mRNA-1:exon:24080;Parent=Msa0088800-mRNA-1 |
| chr1_2 | CDS | 69932817 | 69933575 | 69932817 | ID=Msa0088800-mRNA-1:cds;Parent=Msa0088800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
