Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905290 | XP_003618493.2 | 91.089 | 303 | 15 | 4 | 31 | 330 | 35 | 328 | 8.44e-159 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905290 | sp|Q9LXG0|ZHD8_ARATH | 52.256 | 266 | 83 | 10 | 21 | 278 | 6 | 235 | 9.88e-73 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0905290 | TF | zf-HD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053680 | Msa0905290 | 0.802887 | 4.533329e-49 | -8.615850e-47 |
| Msa0743630 | Msa0905290 | 0.805054 | 1.606547e-49 | -8.615850e-47 |
| Msa0187820 | Msa0905290 | 0.803187 | 3.929172e-49 | -8.615850e-47 |
| Msa0416530 | Msa0905290 | 0.803817 | 2.908961e-49 | -8.615850e-47 |
| Msa0440220 | Msa0905290 | 0.815005 | 1.153497e-51 | -8.615850e-47 |
| Msa0259750 | Msa0905290 | 0.801168 | 1.022522e-48 | -8.615850e-47 |
| Msa0303950 | Msa0905290 | 0.804760 | 1.850303e-49 | -8.615850e-47 |
| Msa0871910 | Msa0905290 | 0.902194 | 1.243947e-78 | -8.615850e-47 |
| Msa0905290 | Msa0937270 | 0.819907 | 9.075209e-53 | -8.615850e-47 |
| Msa0905290 | Msa0968010 | 0.805777 | 1.132931e-49 | -8.615850e-47 |
| Msa0905290 | Msa0974570 | 0.846057 | 2.759035e-59 | -8.615850e-47 |
| Msa0905290 | Msa1011240 | 0.802075 | 6.664061e-49 | -8.615850e-47 |
| Msa0905290 | Msa1018730 | 0.801064 | 1.073720e-48 | -8.615850e-47 |
| Msa0905290 | Msa1147200 | 0.816986 | 4.167462e-52 | -8.615850e-47 |
| Msa0905290 | Msa1236740 | 0.809978 | 1.448676e-50 | -8.615850e-47 |
| Msa0905290 | Msa1344870 | 0.802197 | 6.290133e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905290 | MtrunA17_Chr6g0453231 | 91.089 | 303 | 15 | 4 | 31 | 330 | 35 | 328 | 7.76e-163 | 457 |
| Msa0905290 | MtrunA17_Chr7g0217231 | 54.079 | 331 | 118 | 9 | 23 | 335 | 27 | 341 | 9.43e-89 | 270 |
| Msa0905290 | MtrunA17_Chr3g0133181 | 45.098 | 204 | 89 | 5 | 90 | 281 | 78 | 270 | 1.94e-49 | 166 |
| Msa0905290 | MtrunA17_Chr1g0188441 | 41.379 | 203 | 92 | 4 | 88 | 284 | 5 | 186 | 3.10e-47 | 158 |
| Msa0905290 | MtrunA17_Chr5g0412501 | 44.231 | 208 | 87 | 5 | 92 | 284 | 78 | 271 | 5.02e-46 | 157 |
| Msa0905290 | MtrunA17_Chr5g0427051 | 40.909 | 220 | 97 | 7 | 90 | 284 | 56 | 267 | 8.09e-46 | 157 |
| Msa0905290 | MtrunA17_Chr5g0404271 | 40.654 | 214 | 93 | 7 | 90 | 284 | 97 | 295 | 1.77e-45 | 157 |
| Msa0905290 | MtrunA17_Chr4g0076821 | 37.349 | 249 | 110 | 6 | 92 | 296 | 113 | 359 | 3.73e-41 | 147 |
| Msa0905290 | MtrunA17_Chr2g0315941 | 38.400 | 250 | 127 | 7 | 48 | 284 | 32 | 267 | 1.45e-39 | 140 |
| Msa0905290 | MtrunA17_Chr8g0367691 | 38.645 | 251 | 124 | 8 | 48 | 284 | 33 | 267 | 5.66e-39 | 139 |
| Msa0905290 | MtrunA17_Chr6g0479901 | 35.233 | 193 | 70 | 5 | 92 | 280 | 19 | 160 | 1.75e-32 | 119 |
| Msa0905290 | MtrunA17_Chr8g0361671 | 73.770 | 61 | 16 | 0 | 88 | 148 | 60 | 120 | 3.26e-26 | 107 |
| Msa0905290 | MtrunA17_Chr8g0357741 | 59.375 | 64 | 25 | 1 | 221 | 284 | 34 | 96 | 1.85e-18 | 79.3 |
| Msa0905290 | MtrunA17_Chr3g0092371 | 48.101 | 79 | 37 | 2 | 78 | 156 | 6 | 80 | 2.00e-17 | 76.3 |
| Msa0905290 | MtrunA17_Chr6g0453221 | 61.111 | 54 | 15 | 1 | 89 | 142 | 18 | 65 | 6.43e-16 | 72.0 |
| Msa0905290 | MtrunA17_Chr4g0060731 | 55.738 | 61 | 22 | 2 | 83 | 143 | 16 | 71 | 7.53e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905290 | AT5G15210.1 | 52.256 | 266 | 83 | 10 | 21 | 278 | 6 | 235 | 1.00e-73 | 229 |
| Msa0905290 | AT3G28920.1 | 48.736 | 277 | 79 | 5 | 31 | 281 | 12 | 251 | 1.98e-66 | 212 |
| Msa0905290 | AT1G69600.1 | 50.000 | 222 | 88 | 5 | 78 | 289 | 17 | 225 | 1.84e-62 | 199 |
| Msa0905290 | AT2G02540.2 | 45.701 | 221 | 101 | 6 | 76 | 284 | 71 | 284 | 6.81e-56 | 184 |
| Msa0905290 | AT2G02540.1 | 45.701 | 221 | 101 | 6 | 76 | 284 | 71 | 284 | 6.81e-56 | 184 |
| Msa0905290 | AT4G24660.1 | 47.692 | 195 | 80 | 6 | 90 | 284 | 47 | 219 | 1.25e-50 | 168 |
| Msa0905290 | AT5G60480.1 | 46.114 | 193 | 82 | 3 | 87 | 278 | 32 | 203 | 5.78e-50 | 166 |
| Msa0905290 | AT4G24660.2 | 47.396 | 192 | 79 | 6 | 90 | 281 | 47 | 216 | 4.19e-49 | 164 |
| Msa0905290 | AT1G14440.1 | 41.038 | 212 | 119 | 4 | 89 | 298 | 87 | 294 | 1.35e-45 | 157 |
| Msa0905290 | AT1G14440.2 | 41.038 | 212 | 119 | 4 | 89 | 298 | 87 | 294 | 1.35e-45 | 157 |
| Msa0905290 | AT5G65410.1 | 43.814 | 194 | 91 | 4 | 92 | 283 | 75 | 252 | 4.17e-42 | 147 |
| Msa0905290 | AT1G75240.1 | 37.826 | 230 | 97 | 4 | 90 | 279 | 74 | 297 | 4.69e-41 | 145 |
| Msa0905290 | AT2G18350.1 | 40.000 | 200 | 92 | 3 | 92 | 284 | 82 | 260 | 9.96e-41 | 144 |
| Msa0905290 | AT3G50890.1 | 39.512 | 205 | 89 | 7 | 92 | 283 | 60 | 242 | 4.44e-36 | 131 |
| Msa0905290 | AT5G39760.1 | 76.562 | 64 | 15 | 0 | 221 | 284 | 199 | 262 | 2.54e-29 | 115 |
| Msa0905290 | AT1G14687.1 | 29.843 | 191 | 101 | 6 | 91 | 279 | 6 | 165 | 1.48e-20 | 87.8 |
| Msa0905290 | AT5G42780.1 | 30.412 | 194 | 112 | 6 | 92 | 281 | 64 | 238 | 8.18e-17 | 79.0 |
| Msa0905290 | AT1G74660.2 | 57.407 | 54 | 21 | 1 | 90 | 143 | 37 | 88 | 1.02e-16 | 75.1 |
| Msa0905290 | AT1G74660.1 | 52.239 | 67 | 28 | 2 | 90 | 156 | 37 | 99 | 1.62e-16 | 74.7 |
| Msa0905290 | AT1G18835.1 | 56.716 | 67 | 22 | 3 | 90 | 156 | 24 | 83 | 1.39e-15 | 71.6 |
| Msa0905290 | AT3G28917.1 | 55.932 | 59 | 25 | 1 | 90 | 148 | 31 | 88 | 4.75e-15 | 70.5 |
Find 91 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCATTAGATCATGTTAA+TGG | 0.250191 | 6_2:-3350429 | Msa0905290:CDS |
| TGGTGGTTGTTATGGTGGTT+TGG | 0.275152 | 6_2:+3351083 | None:intergenic |
| TGGAAAAGTGGTGGTGGTGG+TGG | 0.279885 | 6_2:+3350798 | None:intergenic |
| GCTGCTTGTGCTACTACTAA+TGG | 0.296309 | 6_2:-3350315 | Msa0905290:CDS |
| ATAATATGGGTTGTTGGATT+CGG | 0.298519 | 6_2:+3351159 | None:intergenic |
| ATAGAAGTGTTCTCAAAGTT+TGG | 0.303184 | 6_2:-3350485 | Msa0905290:CDS |
| GGTGGTTGTTATGGTGGTTT+GGG | 0.305679 | 6_2:+3351084 | None:intergenic |
| GAGAATGAGAATGAGAATAA+TGG | 0.322777 | 6_2:-3350348 | Msa0905290:CDS |
| ACGGTGGAAATTGGTTCTTC+TGG | 0.326802 | 6_2:+3350852 | None:intergenic |
| CAACGTTGTTGTGGCTGTTA+AGG | 0.341042 | 6_2:+3351039 | None:intergenic |
| TAATATGGGTTGTTGGATTC+GGG | 0.347050 | 6_2:+3351160 | None:intergenic |
| TGTTATGGTGGTTTGGGTGG+TGG | 0.354967 | 6_2:+3351090 | None:intergenic |
| TGTTGTTGTGGTGGTTGTTA+TGG | 0.356036 | 6_2:+3351075 | None:intergenic |
| TGAGGTTGTGTTTGTGTTTG+TGG | 0.361319 | 6_2:+3351256 | None:intergenic |
| GCCGCCGTGGACGGTGGCTC+CGG | 0.363036 | 6_2:-3350387 | Msa0905290:CDS |
| GTTCACGGCGGTGGAAATTC+CGG | 0.371866 | 6_2:+3350874 | None:intergenic |
| GCAGAAGAGAGATGAAGAAA+TGG | 0.377517 | 6_2:-3350538 | Msa0905290:CDS |
| AGAATGAGAATGAGAATAAT+GGG | 0.380257 | 6_2:-3350347 | Msa0905290:CDS |
| GTGGTGGTGGTGGGTGGTGA+CGG | 0.390566 | 6_2:+3350808 | None:intergenic |
| CATAATAATAAGAACACTTT+GGG | 0.393395 | 6_2:-3350459 | Msa0905290:CDS |
| GGAAAAGTGGTGGTGGTGGT+GGG | 0.399754 | 6_2:+3350799 | None:intergenic |
| GTTCTTCTGGTTCACGGCGG+TGG | 0.402398 | 6_2:+3350865 | None:intergenic |
| TGGGTTGTTGGATTCGGGTC+GGG | 0.404618 | 6_2:+3351165 | None:intergenic |
| CTGCTTGTGCTACTACTAAT+GGG | 0.418784 | 6_2:-3350314 | Msa0905290:CDS |
| AGTAGTGTTTGTGGAGTTTG+AGG | 0.419884 | 6_2:+3351238 | None:intergenic |
| GCACTCTCCGGCGGCGGAGT+TGG | 0.428986 | 6_2:-3350705 | Msa0905290:CDS |
| ACCGTCCACGGCGGCGTTCA+CGG | 0.433426 | 6_2:+3350395 | None:intergenic |
| TAAAGATGTAGTAGTGTTTG+TGG | 0.433691 | 6_2:+3351229 | None:intergenic |
| CATGAATTTGCTGATAAAGT+TGG | 0.436563 | 6_2:-3350570 | Msa0905290:CDS |
| GTTAAACCTAAGTTCACCTA+TGG | 0.442479 | 6_2:-3350649 | Msa0905290:CDS |
| TTGTTCCCATAGGTGAACTT+AGG | 0.444104 | 6_2:+3350643 | None:intergenic |
| AAATTGGTTCTTCTGGTTCA+CGG | 0.448974 | 6_2:+3350859 | None:intergenic |
| CTCCGCCGCCGGAGAGTGCT+AGG | 0.449288 | 6_2:+3350709 | None:intergenic |
| GCATAATAATAAGAACACTT+TGG | 0.453675 | 6_2:-3350460 | Msa0905290:CDS |
| ATAGGTGAACTTAGGTTTAA+CGG | 0.456911 | 6_2:+3350651 | None:intergenic |
| GTGGACGGTGGCTCCGGTGC+TGG | 0.465858 | 6_2:-3350381 | Msa0905290:CDS |
| GATGAGATCGGTGGTGGTGA+TGG | 0.466679 | 6_2:+3350756 | None:intergenic |
| TTTGTTATGTTTGATAATAT+GGG | 0.469353 | 6_2:+3351146 | None:intergenic |
| TGTTTGATAATATGGGTTGT+TGG | 0.474981 | 6_2:+3351153 | None:intergenic |
| GCCGTGAACGCCGCCGTGGA+CGG | 0.475419 | 6_2:-3350396 | Msa0905290:CDS |
| TGTTGTGGTGGTTGTTATGG+TGG | 0.485309 | 6_2:+3351078 | None:intergenic |
| CTCCTAGCACTCTCCGGCGG+CGG | 0.489973 | 6_2:-3350711 | Msa0905290:CDS |
| TCGGAAGTGGCGGTTGGTGA+TGG | 0.491758 | 6_2:+3350936 | None:intergenic |
| TGAATTCACAACAACCGTCT+AGG | 0.501575 | 6_2:+3350961 | None:intergenic |
| GAGAGCTTGGTGAACGTGAC+TGG | 0.503561 | 6_2:+3350778 | None:intergenic |
| GGTTGTTATGGTGGTTTGGG+TGG | 0.511067 | 6_2:+3351087 | None:intergenic |
| ATGGGTTGTTGGATTCGGGT+CGG | 0.513650 | 6_2:+3351164 | None:intergenic |
| GGAGCATATGTGGGGCTGAT+GGG | 0.515021 | 6_2:+3350730 | None:intergenic |
| GGAAGCAGGGTCATCGGAAG+TGG | 0.518499 | 6_2:+3350923 | None:intergenic |
| GAGAGTGCTAGGAGCATATG+TGG | 0.519263 | 6_2:+3350720 | None:intergenic |
| GGTGGGTGGTGACGGTGATG+AGG | 0.524327 | 6_2:+3350816 | None:intergenic |
| GACTGGAAAAGTGGTGGTGG+TGG | 0.528628 | 6_2:+3350795 | None:intergenic |
| ATGAATTTGCTGATAAAGTT+GGG | 0.532314 | 6_2:-3350569 | Msa0905290:CDS |
| CTCATTCTCACAACCAGCAC+CGG | 0.532890 | 6_2:+3350368 | None:intergenic |
| AGCACCGGAGCCACCGTCCA+CGG | 0.542409 | 6_2:+3350383 | None:intergenic |
| TACTAACAACGTTGTTGTTG+TGG | 0.545220 | 6_2:+3351063 | None:intergenic |
| CGCCGCCGTGAACGCCGCCG+TGG | 0.548960 | 6_2:-3350400 | Msa0905290:CDS |
| GAATTCACAACAACCGTCTA+GGG | 0.549245 | 6_2:+3350962 | None:intergenic |
| AGAGATGAAGAAATGGTGAA+TGG | 0.553318 | 6_2:-3350531 | Msa0905290:CDS |
| GTGAACGCCGCCGTGGACGG+TGG | 0.560193 | 6_2:-3350393 | Msa0905290:CDS |
| GGGTATGATGAGATCGGTGG+TGG | 0.562285 | 6_2:+3350750 | None:intergenic |
| AGGAGCATATGTGGGGCTGA+TGG | 0.563044 | 6_2:+3350729 | None:intergenic |
| AAAATTCACACAAGAACAGA+AGG | 0.564253 | 6_2:-3350601 | Msa0905290:CDS |
| AAAACCACGTGGCAACCCTA+GGG | 0.566063 | 6_2:-3350992 | Msa0905290:CDS |
| AGCAGGGTCATCGGAAGTGG+CGG | 0.573105 | 6_2:+3350926 | None:intergenic |
| GTGCCGCATGTGGTTGTCAC+CGG | 0.583080 | 6_2:-3350893 | Msa0905290:CDS |
| CATATGCTCCTAGCACTCTC+CGG | 0.583614 | 6_2:-3350717 | Msa0905290:CDS |
| AGAGAGACCAACTCCGCCGC+CGG | 0.587710 | 6_2:+3350698 | None:intergenic |
| GGTGGTGGTGATGGAGAGCT+TGG | 0.592318 | 6_2:+3350765 | None:intergenic |
| AGAGTGCTAGGAGCATATGT+GGG | 0.593872 | 6_2:+3350721 | None:intergenic |
| TAACAACGTTGTTGTTGTGG+TGG | 0.598435 | 6_2:+3351066 | None:intergenic |
| GGTTGTGTTTGTGTTTGTGG+TGG | 0.603786 | 6_2:+3351259 | None:intergenic |
| GGGTCATCGGAAGTGGCGGT+TGG | 0.608170 | 6_2:+3350930 | None:intergenic |
| GGTGAACGTGACTGGAAAAG+TGG | 0.613133 | 6_2:+3350786 | None:intergenic |
| AGTTGGTCTCTCTATCCCAC+CGG | 0.613344 | 6_2:-3350688 | Msa0905290:CDS |
| TTAAACCTAAGTTCACCTAT+GGG | 0.614933 | 6_2:-3350648 | Msa0905290:CDS |
| GCTGATGGGTATGATGAGAT+CGG | 0.623612 | 6_2:+3350744 | None:intergenic |
| TCCATAAAATGTGCCGCATG+TGG | 0.626127 | 6_2:-3350903 | Msa0905290:CDS |
| CGTGACTGGAAAAGTGGTGG+TGG | 0.630559 | 6_2:+3350792 | None:intergenic |
| ATTCCGGTGACAACCACATG+CGG | 0.634291 | 6_2:+3350890 | None:intergenic |
| AAGTAACAACAACGTTGTTG+TGG | 0.645069 | 6_2:+3351030 | None:intergenic |
| AACCACGTGGCAACCCTAGG+GGG | 0.653173 | 6_2:-3350990 | Msa0905290:CDS |
| GTCCACGGCGGCGTTCACGG+CGG | 0.666295 | 6_2:+3350398 | None:intergenic |
| AATTTGCTGATAAAGTTGGG+TGG | 0.672155 | 6_2:-3350566 | Msa0905290:CDS |
| GATGGGTATGATGAGATCGG+TGG | 0.677125 | 6_2:+3350747 | None:intergenic |
| GAGTGCTAGGAGCATATGTG+GGG | 0.685070 | 6_2:+3350722 | None:intergenic |
| AAACCACGTGGCAACCCTAG+GGG | 0.691361 | 6_2:-3350991 | Msa0905290:CDS |
| ACCGGAGCCACCGTCCACGG+CGG | 0.706919 | 6_2:+3350386 | None:intergenic |
| ATGCTCCTAGCACTCTCCGG+CGG | 0.721377 | 6_2:-3350714 | Msa0905290:CDS |
| GAACGTGACTGGAAAAGTGG+TGG | 0.728886 | 6_2:+3350789 | None:intergenic |
| TTGGTTCTTCTGGTTCACGG+CGG | 0.755592 | 6_2:+3350862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTATGTTTGATAATAT+GGG | + | chr6_2:3350434-3350453 | None:intergenic | 15.0% |
| !!! | TTTTGTTATGTTTGATAATA+TGG | + | chr6_2:3350435-3350454 | None:intergenic | 15.0% |
| !!! | TTTGTTATGTTTGATAATAT+GGG | + | chr6_2:3350434-3350453 | None:intergenic | 15.0% |
| !!! | TTTTGTTATGTTTGATAATA+TGG | + | chr6_2:3350435-3350454 | None:intergenic | 15.0% |
| !! | CATAATAATAAGAACACTTT+GGG | - | chr6_2:3351118-3351137 | Msa0905290:CDS | 20.0% |
| !! | TTATCATTAGATCATGTTAA+TGG | - | chr6_2:3351148-3351167 | Msa0905290:CDS | 20.0% |
| !! | CATAATAATAAGAACACTTT+GGG | - | chr6_2:3351118-3351137 | Msa0905290:CDS | 20.0% |
| !! | TTATCATTAGATCATGTTAA+TGG | - | chr6_2:3351148-3351167 | Msa0905290:CDS | 20.0% |
| !!! | AAACCTTTGTCTTTTTCAAA+TGG | - | chr6_2:3350452-3350471 | Msa0905290:CDS | 25.0% |
| !!! | ATGAGGTTGATATTCAAAAA+CGG | + | chr6_2:3350747-3350766 | None:intergenic | 25.0% |
| !!! | ATGAATTTGCTGATAAAGTT+GGG | - | chr6_2:3351008-3351027 | Msa0905290:CDS | 25.0% |
| ! | GCATAATAATAAGAACACTT+TGG | - | chr6_2:3351117-3351136 | Msa0905290:CDS | 25.0% |
| ! | AGAATGAGAATGAGAATAAT+GGG | - | chr6_2:3351230-3351249 | Msa0905290:CDS | 25.0% |
| !!! | AAACCTTTGTCTTTTTCAAA+TGG | - | chr6_2:3350452-3350471 | Msa0905290:CDS | 25.0% |
| !!! | ATGAGGTTGATATTCAAAAA+CGG | + | chr6_2:3350747-3350766 | None:intergenic | 25.0% |
| !!! | ATGAATTTGCTGATAAAGTT+GGG | - | chr6_2:3351008-3351027 | Msa0905290:CDS | 25.0% |
| ! | GCATAATAATAAGAACACTT+TGG | - | chr6_2:3351117-3351136 | Msa0905290:CDS | 25.0% |
| ! | AGAATGAGAATGAGAATAAT+GGG | - | chr6_2:3351230-3351249 | Msa0905290:CDS | 25.0% |
| TAAAGATGTAGTAGTGTTTG+TGG | + | chr6_2:3350351-3350370 | None:intergenic | 30.0% | |
| ! | ATAATATGGGTTGTTGGATT+CGG | + | chr6_2:3350421-3350440 | None:intergenic | 30.0% |
| ! | TGTTTGATAATATGGGTTGT+TGG | + | chr6_2:3350427-3350446 | None:intergenic | 30.0% |
| ACACCATTTGAAAAAGACAA+AGG | + | chr6_2:3350458-3350477 | None:intergenic | 30.0% | |
| TATTCAAAAACGGTGGAAAT+TGG | + | chr6_2:3350737-3350756 | None:intergenic | 30.0% | |
| ATAGGTGAACTTAGGTTTAA+CGG | + | chr6_2:3350929-3350948 | None:intergenic | 30.0% | |
| TTAAACCTAAGTTCACCTAT+GGG | - | chr6_2:3350929-3350948 | Msa0905290:CDS | 30.0% | |
| AAAATTCACACAAGAACAGA+AGG | - | chr6_2:3350976-3350995 | Msa0905290:CDS | 30.0% | |
| !! | CATGAATTTGCTGATAAAGT+TGG | - | chr6_2:3351007-3351026 | Msa0905290:CDS | 30.0% |
| ! | AATGGTTTTTGCAATGAAGT+TGG | - | chr6_2:3351064-3351083 | Msa0905290:CDS | 30.0% |
| !! | ATAGAAGTGTTCTCAAAGTT+TGG | - | chr6_2:3351092-3351111 | Msa0905290:CDS | 30.0% |
| GAGAATGAGAATGAGAATAA+TGG | - | chr6_2:3351229-3351248 | Msa0905290:CDS | 30.0% | |
| TAAAGATGTAGTAGTGTTTG+TGG | + | chr6_2:3350351-3350370 | None:intergenic | 30.0% | |
| ! | ATAATATGGGTTGTTGGATT+CGG | + | chr6_2:3350421-3350440 | None:intergenic | 30.0% |
| ! | TGTTTGATAATATGGGTTGT+TGG | + | chr6_2:3350427-3350446 | None:intergenic | 30.0% |
| ACACCATTTGAAAAAGACAA+AGG | + | chr6_2:3350458-3350477 | None:intergenic | 30.0% | |
| TATTCAAAAACGGTGGAAAT+TGG | + | chr6_2:3350737-3350756 | None:intergenic | 30.0% | |
| ATAGGTGAACTTAGGTTTAA+CGG | + | chr6_2:3350929-3350948 | None:intergenic | 30.0% | |
| TTAAACCTAAGTTCACCTAT+GGG | - | chr6_2:3350929-3350948 | Msa0905290:CDS | 30.0% | |
| AAAATTCACACAAGAACAGA+AGG | - | chr6_2:3350976-3350995 | Msa0905290:CDS | 30.0% | |
| !! | CATGAATTTGCTGATAAAGT+TGG | - | chr6_2:3351007-3351026 | Msa0905290:CDS | 30.0% |
| ! | AATGGTTTTTGCAATGAAGT+TGG | - | chr6_2:3351064-3351083 | Msa0905290:CDS | 30.0% |
| !! | ATAGAAGTGTTCTCAAAGTT+TGG | - | chr6_2:3351092-3351111 | Msa0905290:CDS | 30.0% |
| GAGAATGAGAATGAGAATAA+TGG | - | chr6_2:3351229-3351248 | Msa0905290:CDS | 30.0% | |
| ! | TAATATGGGTTGTTGGATTC+GGG | + | chr6_2:3350420-3350439 | None:intergenic | 35.0% |
| ! | TACTAACAACGTTGTTGTTG+TGG | + | chr6_2:3350517-3350536 | None:intergenic | 35.0% |
| AAGTAACAACAACGTTGTTG+TGG | + | chr6_2:3350550-3350569 | None:intergenic | 35.0% | |
| !! | AAATTGGTTCTTCTGGTTCA+CGG | + | chr6_2:3350721-3350740 | None:intergenic | 35.0% |
| !! | AGGTTGATATTCAAAAACGG+TGG | + | chr6_2:3350744-3350763 | None:intergenic | 35.0% |
| GTTAAACCTAAGTTCACCTA+TGG | - | chr6_2:3350928-3350947 | Msa0905290:CDS | 35.0% | |
| ! | CTTTTTCTACTTGTTCCCAT+AGG | + | chr6_2:3350947-3350966 | None:intergenic | 35.0% |
| !! | AATTTGCTGATAAAGTTGGG+TGG | - | chr6_2:3351011-3351030 | Msa0905290:CDS | 35.0% |
| AGAGATGAAGAAATGGTGAA+TGG | - | chr6_2:3351046-3351065 | Msa0905290:CDS | 35.0% | |
| ! | TAATATGGGTTGTTGGATTC+GGG | + | chr6_2:3350420-3350439 | None:intergenic | 35.0% |
| ! | TACTAACAACGTTGTTGTTG+TGG | + | chr6_2:3350517-3350536 | None:intergenic | 35.0% |
| AAGTAACAACAACGTTGTTG+TGG | + | chr6_2:3350550-3350569 | None:intergenic | 35.0% | |
| !! | AAATTGGTTCTTCTGGTTCA+CGG | + | chr6_2:3350721-3350740 | None:intergenic | 35.0% |
| !! | AGGTTGATATTCAAAAACGG+TGG | + | chr6_2:3350744-3350763 | None:intergenic | 35.0% |
| GTTAAACCTAAGTTCACCTA+TGG | - | chr6_2:3350928-3350947 | Msa0905290:CDS | 35.0% | |
| ! | CTTTTTCTACTTGTTCCCAT+AGG | + | chr6_2:3350947-3350966 | None:intergenic | 35.0% |
| !! | AATTTGCTGATAAAGTTGGG+TGG | - | chr6_2:3351011-3351030 | Msa0905290:CDS | 35.0% |
| AGAGATGAAGAAATGGTGAA+TGG | - | chr6_2:3351046-3351065 | Msa0905290:CDS | 35.0% | |
| TGAGGTTGTGTTTGTGTTTG+TGG | + | chr6_2:3350324-3350343 | None:intergenic | 40.0% | |
| AGTAGTGTTTGTGGAGTTTG+AGG | + | chr6_2:3350342-3350361 | None:intergenic | 40.0% | |
| TGTTGTTGTGGTGGTTGTTA+TGG | + | chr6_2:3350505-3350524 | None:intergenic | 40.0% | |
| ! | TAACAACGTTGTTGTTGTGG+TGG | + | chr6_2:3350514-3350533 | None:intergenic | 40.0% |
| AGAATGTCTCAAAAACCACG+TGG | - | chr6_2:3350574-3350593 | Msa0905290:CDS | 40.0% | |
| GAATTCACAACAACCGTCTA+GGG | + | chr6_2:3350618-3350637 | None:intergenic | 40.0% | |
| TGAATTCACAACAACCGTCT+AGG | + | chr6_2:3350619-3350638 | None:intergenic | 40.0% | |
| ! | TTTTATGGAAGCAGGGTCAT+CGG | + | chr6_2:3350663-3350682 | None:intergenic | 40.0% |
| TTGTTCCCATAGGTGAACTT+AGG | + | chr6_2:3350937-3350956 | None:intergenic | 40.0% | |
| GCAGAAGAGAGATGAAGAAA+TGG | - | chr6_2:3351039-3351058 | Msa0905290:CDS | 40.0% | |
| ! | CTGCTTGTGCTACTACTAAT+GGG | - | chr6_2:3351263-3351282 | Msa0905290:CDS | 40.0% |
| TGAGGTTGTGTTTGTGTTTG+TGG | + | chr6_2:3350324-3350343 | None:intergenic | 40.0% | |
| AGTAGTGTTTGTGGAGTTTG+AGG | + | chr6_2:3350342-3350361 | None:intergenic | 40.0% | |
| TGTTGTTGTGGTGGTTGTTA+TGG | + | chr6_2:3350505-3350524 | None:intergenic | 40.0% | |
| ! | TAACAACGTTGTTGTTGTGG+TGG | + | chr6_2:3350514-3350533 | None:intergenic | 40.0% |
| AGAATGTCTCAAAAACCACG+TGG | - | chr6_2:3350574-3350593 | Msa0905290:CDS | 40.0% | |
| GAATTCACAACAACCGTCTA+GGG | + | chr6_2:3350618-3350637 | None:intergenic | 40.0% | |
| TGAATTCACAACAACCGTCT+AGG | + | chr6_2:3350619-3350638 | None:intergenic | 40.0% | |
| ! | TTTTATGGAAGCAGGGTCAT+CGG | + | chr6_2:3350663-3350682 | None:intergenic | 40.0% |
| TTGTTCCCATAGGTGAACTT+AGG | + | chr6_2:3350937-3350956 | None:intergenic | 40.0% | |
| GCAGAAGAGAGATGAAGAAA+TGG | - | chr6_2:3351039-3351058 | Msa0905290:CDS | 40.0% | |
| ! | CTGCTTGTGCTACTACTAAT+GGG | - | chr6_2:3351263-3351282 | Msa0905290:CDS | 40.0% |
| GGTTGTGTTTGTGTTTGTGG+TGG | + | chr6_2:3350321-3350340 | None:intergenic | 45.0% | |
| GGTGGTTGTTATGGTGGTTT+GGG | + | chr6_2:3350496-3350515 | None:intergenic | 45.0% | |
| TGGTGGTTGTTATGGTGGTT+TGG | + | chr6_2:3350497-3350516 | None:intergenic | 45.0% | |
| TGTTGTGGTGGTTGTTATGG+TGG | + | chr6_2:3350502-3350521 | None:intergenic | 45.0% | |
| CAACGTTGTTGTGGCTGTTA+AGG | + | chr6_2:3350541-3350560 | None:intergenic | 45.0% | |
| ! | CGGCACATTTTATGGAAGCA+GGG | + | chr6_2:3350670-3350689 | None:intergenic | 45.0% |
| TCCATAAAATGTGCCGCATG+TGG | - | chr6_2:3350674-3350693 | Msa0905290:CDS | 45.0% | |
| ! | ACCACATGCGGCACATTTTA+TGG | + | chr6_2:3350678-3350697 | None:intergenic | 45.0% |
| ! | ACGGTGGAAATTGGTTCTTC+TGG | + | chr6_2:3350728-3350747 | None:intergenic | 45.0% |
| ! | GCTGATGGGTATGATGAGAT+CGG | + | chr6_2:3350836-3350855 | None:intergenic | 45.0% |
| ! | AGAGTGCTAGGAGCATATGT+GGG | + | chr6_2:3350859-3350878 | None:intergenic | 45.0% |
| ! | GCTGCTTGTGCTACTACTAA+TGG | - | chr6_2:3351262-3351281 | Msa0905290:CDS | 45.0% |
| GGTTGTGTTTGTGTTTGTGG+TGG | + | chr6_2:3350321-3350340 | None:intergenic | 45.0% | |
| GGTGGTTGTTATGGTGGTTT+GGG | + | chr6_2:3350496-3350515 | None:intergenic | 45.0% | |
| TGGTGGTTGTTATGGTGGTT+TGG | + | chr6_2:3350497-3350516 | None:intergenic | 45.0% | |
| TGTTGTGGTGGTTGTTATGG+TGG | + | chr6_2:3350502-3350521 | None:intergenic | 45.0% | |
| CAACGTTGTTGTGGCTGTTA+AGG | + | chr6_2:3350541-3350560 | None:intergenic | 45.0% | |
| ! | CGGCACATTTTATGGAAGCA+GGG | + | chr6_2:3350670-3350689 | None:intergenic | 45.0% |
| TCCATAAAATGTGCCGCATG+TGG | - | chr6_2:3350674-3350693 | Msa0905290:CDS | 45.0% | |
| ! | ACCACATGCGGCACATTTTA+TGG | + | chr6_2:3350678-3350697 | None:intergenic | 45.0% |
| ! | ACGGTGGAAATTGGTTCTTC+TGG | + | chr6_2:3350728-3350747 | None:intergenic | 45.0% |
| ! | GCTGATGGGTATGATGAGAT+CGG | + | chr6_2:3350836-3350855 | None:intergenic | 45.0% |
| ! | AGAGTGCTAGGAGCATATGT+GGG | + | chr6_2:3350859-3350878 | None:intergenic | 45.0% |
| ! | GCTGCTTGTGCTACTACTAA+TGG | - | chr6_2:3351262-3351281 | Msa0905290:CDS | 45.0% |
| ! | TCGGGTCGGGTTTTCTGATT+CGG | + | chr6_2:3350402-3350421 | None:intergenic | 50.0% |
| ! | ATGGGTTGTTGGATTCGGGT+CGG | + | chr6_2:3350416-3350435 | None:intergenic | 50.0% |
| ! | TGTTATGGTGGTTTGGGTGG+TGG | + | chr6_2:3350490-3350509 | None:intergenic | 50.0% |
| ! | GGTTGTTATGGTGGTTTGGG+TGG | + | chr6_2:3350493-3350512 | None:intergenic | 50.0% |
| AAAAACCACGTGGCAACCCT+AGG | - | chr6_2:3350584-3350603 | Msa0905290:CDS | 50.0% | |
| AAAACCACGTGGCAACCCTA+GGG | - | chr6_2:3350585-3350604 | Msa0905290:CDS | 50.0% | |
| ! | GCGGCACATTTTATGGAAGC+AGG | + | chr6_2:3350671-3350690 | None:intergenic | 50.0% |
| ATTCCGGTGACAACCACATG+CGG | + | chr6_2:3350690-3350709 | None:intergenic | 50.0% | |
| !! | TTGGTTCTTCTGGTTCACGG+CGG | + | chr6_2:3350718-3350737 | None:intergenic | 50.0% |
| GAACGTGACTGGAAAAGTGG+TGG | + | chr6_2:3350791-3350810 | None:intergenic | 50.0% | |
| GGTGAACGTGACTGGAAAAG+TGG | + | chr6_2:3350794-3350813 | None:intergenic | 50.0% | |
| GATGGGTATGATGAGATCGG+TGG | + | chr6_2:3350833-3350852 | None:intergenic | 50.0% | |
| ! | GAGTGCTAGGAGCATATGTG+GGG | + | chr6_2:3350858-3350877 | None:intergenic | 50.0% |
| !! | GAGAGTGCTAGGAGCATATG+TGG | + | chr6_2:3350860-3350879 | None:intergenic | 50.0% |
| CATATGCTCCTAGCACTCTC+CGG | - | chr6_2:3350860-3350879 | Msa0905290:CDS | 50.0% | |
| ! | AGTTGGTCTCTCTATCCCAC+CGG | - | chr6_2:3350889-3350908 | Msa0905290:CDS | 50.0% |
| ! | AACGGTGCAGCAGTGTTTTC+CGG | + | chr6_2:3350911-3350930 | None:intergenic | 50.0% |
| CTCATTCTCACAACCAGCAC+CGG | + | chr6_2:3351212-3351231 | None:intergenic | 50.0% | |
| ! | TCGGGTCGGGTTTTCTGATT+CGG | + | chr6_2:3350402-3350421 | None:intergenic | 50.0% |
| ! | ATGGGTTGTTGGATTCGGGT+CGG | + | chr6_2:3350416-3350435 | None:intergenic | 50.0% |
| ! | TGTTATGGTGGTTTGGGTGG+TGG | + | chr6_2:3350490-3350509 | None:intergenic | 50.0% |
| ! | GGTTGTTATGGTGGTTTGGG+TGG | + | chr6_2:3350493-3350512 | None:intergenic | 50.0% |
| AAAAACCACGTGGCAACCCT+AGG | - | chr6_2:3350584-3350603 | Msa0905290:CDS | 50.0% | |
| AAAACCACGTGGCAACCCTA+GGG | - | chr6_2:3350585-3350604 | Msa0905290:CDS | 50.0% | |
| ! | GCGGCACATTTTATGGAAGC+AGG | + | chr6_2:3350671-3350690 | None:intergenic | 50.0% |
| ATTCCGGTGACAACCACATG+CGG | + | chr6_2:3350690-3350709 | None:intergenic | 50.0% | |
| !! | TTGGTTCTTCTGGTTCACGG+CGG | + | chr6_2:3350718-3350737 | None:intergenic | 50.0% |
| GAACGTGACTGGAAAAGTGG+TGG | + | chr6_2:3350791-3350810 | None:intergenic | 50.0% | |
| GGTGAACGTGACTGGAAAAG+TGG | + | chr6_2:3350794-3350813 | None:intergenic | 50.0% | |
| GATGGGTATGATGAGATCGG+TGG | + | chr6_2:3350833-3350852 | None:intergenic | 50.0% | |
| ! | GAGTGCTAGGAGCATATGTG+GGG | + | chr6_2:3350858-3350877 | None:intergenic | 50.0% |
| !! | GAGAGTGCTAGGAGCATATG+TGG | + | chr6_2:3350860-3350879 | None:intergenic | 50.0% |
| CATATGCTCCTAGCACTCTC+CGG | - | chr6_2:3350860-3350879 | Msa0905290:CDS | 50.0% | |
| ! | AGTTGGTCTCTCTATCCCAC+CGG | - | chr6_2:3350889-3350908 | Msa0905290:CDS | 50.0% |
| ! | AACGGTGCAGCAGTGTTTTC+CGG | + | chr6_2:3350911-3350930 | None:intergenic | 50.0% |
| CTCATTCTCACAACCAGCAC+CGG | + | chr6_2:3351212-3351231 | None:intergenic | 50.0% | |
| ! | CGGGTCGGGTTTTCTGATTC+GGG | + | chr6_2:3350401-3350420 | None:intergenic | 55.0% |
| TGGGTTGTTGGATTCGGGTC+GGG | + | chr6_2:3350415-3350434 | None:intergenic | 55.0% | |
| AAACCACGTGGCAACCCTAG+GGG | - | chr6_2:3350586-3350605 | Msa0905290:CDS | 55.0% | |
| GTTCACGGCGGTGGAAATTC+CGG | + | chr6_2:3350706-3350725 | None:intergenic | 55.0% | |
| !! | GGAAAAGTGGTGGTGGTGGT+GGG | + | chr6_2:3350781-3350800 | None:intergenic | 55.0% |
| !! | TGGAAAAGTGGTGGTGGTGG+TGG | + | chr6_2:3350782-3350801 | None:intergenic | 55.0% |
| !! | GACTGGAAAAGTGGTGGTGG+TGG | + | chr6_2:3350785-3350804 | None:intergenic | 55.0% |
| CGTGACTGGAAAAGTGGTGG+TGG | + | chr6_2:3350788-3350807 | None:intergenic | 55.0% | |
| ! | GAGAGCTTGGTGAACGTGAC+TGG | + | chr6_2:3350802-3350821 | None:intergenic | 55.0% |
| ! | GATGAGATCGGTGGTGGTGA+TGG | + | chr6_2:3350824-3350843 | None:intergenic | 55.0% |
| GGGTATGATGAGATCGGTGG+TGG | + | chr6_2:3350830-3350849 | None:intergenic | 55.0% | |
| GGAGCATATGTGGGGCTGAT+GGG | + | chr6_2:3350850-3350869 | None:intergenic | 55.0% | |
| ! | AGGAGCATATGTGGGGCTGA+TGG | + | chr6_2:3350851-3350870 | None:intergenic | 55.0% |
| ! | GTGCAGCAGTGTTTTCCGGT+GGG | + | chr6_2:3350907-3350926 | None:intergenic | 55.0% |
| ! | CGGGTCGGGTTTTCTGATTC+GGG | + | chr6_2:3350401-3350420 | None:intergenic | 55.0% |
| TGGGTTGTTGGATTCGGGTC+GGG | + | chr6_2:3350415-3350434 | None:intergenic | 55.0% | |
| AAACCACGTGGCAACCCTAG+GGG | - | chr6_2:3350586-3350605 | Msa0905290:CDS | 55.0% | |
| GTTCACGGCGGTGGAAATTC+CGG | + | chr6_2:3350706-3350725 | None:intergenic | 55.0% | |
| !! | GGAAAAGTGGTGGTGGTGGT+GGG | + | chr6_2:3350781-3350800 | None:intergenic | 55.0% |
| !! | TGGAAAAGTGGTGGTGGTGG+TGG | + | chr6_2:3350782-3350801 | None:intergenic | 55.0% |
| !! | GACTGGAAAAGTGGTGGTGG+TGG | + | chr6_2:3350785-3350804 | None:intergenic | 55.0% |
| CGTGACTGGAAAAGTGGTGG+TGG | + | chr6_2:3350788-3350807 | None:intergenic | 55.0% | |
| ! | GAGAGCTTGGTGAACGTGAC+TGG | + | chr6_2:3350802-3350821 | None:intergenic | 55.0% |
| ! | GATGAGATCGGTGGTGGTGA+TGG | + | chr6_2:3350824-3350843 | None:intergenic | 55.0% |
| GGGTATGATGAGATCGGTGG+TGG | + | chr6_2:3350830-3350849 | None:intergenic | 55.0% | |
| GGAGCATATGTGGGGCTGAT+GGG | + | chr6_2:3350850-3350869 | None:intergenic | 55.0% | |
| ! | AGGAGCATATGTGGGGCTGA+TGG | + | chr6_2:3350851-3350870 | None:intergenic | 55.0% |
| ! | GTGCAGCAGTGTTTTCCGGT+GGG | + | chr6_2:3350907-3350926 | None:intergenic | 55.0% |
| AACCACGTGGCAACCCTAGG+GGG | - | chr6_2:3350587-3350606 | Msa0905290:CDS | 60.0% | |
| ! | GTCTAGGGCATGACCCCCTA+GGG | + | chr6_2:3350603-3350622 | None:intergenic | 60.0% |
| CTAGGGGGTCATGCCCTAGA+CGG | - | chr6_2:3350602-3350621 | Msa0905290:CDS | 60.0% | |
| !! | TCGGAAGTGGCGGTTGGTGA+TGG | + | chr6_2:3350644-3350663 | None:intergenic | 60.0% |
| AGCAGGGTCATCGGAAGTGG+CGG | + | chr6_2:3350654-3350673 | None:intergenic | 60.0% | |
| GGAAGCAGGGTCATCGGAAG+TGG | + | chr6_2:3350657-3350676 | None:intergenic | 60.0% | |
| GTGCCGCATGTGGTTGTCAC+CGG | - | chr6_2:3350684-3350703 | Msa0905290:CDS | 60.0% | |
| !! | GTTCTTCTGGTTCACGGCGG+TGG | + | chr6_2:3350715-3350734 | None:intergenic | 60.0% |
| !! | AAAGTGGTGGTGGTGGTGGG+TGG | + | chr6_2:3350778-3350797 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGATGGAGAGCT+TGG | + | chr6_2:3350815-3350834 | None:intergenic | 60.0% |
| ATGCTCCTAGCACTCTCCGG+CGG | - | chr6_2:3350863-3350882 | Msa0905290:CDS | 60.0% | |
| ! | GGTGCAGCAGTGTTTTCCGG+TGG | + | chr6_2:3350908-3350927 | None:intergenic | 60.0% |
| AACCACGTGGCAACCCTAGG+GGG | - | chr6_2:3350587-3350606 | Msa0905290:CDS | 60.0% | |
| ! | GTCTAGGGCATGACCCCCTA+GGG | + | chr6_2:3350603-3350622 | None:intergenic | 60.0% |
| CTAGGGGGTCATGCCCTAGA+CGG | - | chr6_2:3350602-3350621 | Msa0905290:CDS | 60.0% | |
| !! | TCGGAAGTGGCGGTTGGTGA+TGG | + | chr6_2:3350644-3350663 | None:intergenic | 60.0% |
| AGCAGGGTCATCGGAAGTGG+CGG | + | chr6_2:3350654-3350673 | None:intergenic | 60.0% | |
| GGAAGCAGGGTCATCGGAAG+TGG | + | chr6_2:3350657-3350676 | None:intergenic | 60.0% | |
| GTGCCGCATGTGGTTGTCAC+CGG | - | chr6_2:3350684-3350703 | Msa0905290:CDS | 60.0% | |
| !! | GTTCTTCTGGTTCACGGCGG+TGG | + | chr6_2:3350715-3350734 | None:intergenic | 60.0% |
| !! | AAAGTGGTGGTGGTGGTGGG+TGG | + | chr6_2:3350778-3350797 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGATGGAGAGCT+TGG | + | chr6_2:3350815-3350834 | None:intergenic | 60.0% |
| ATGCTCCTAGCACTCTCCGG+CGG | - | chr6_2:3350863-3350882 | Msa0905290:CDS | 60.0% | |
| ! | GGTGCAGCAGTGTTTTCCGG+TGG | + | chr6_2:3350908-3350927 | None:intergenic | 60.0% |
| ! | CGTCTAGGGCATGACCCCCT+AGG | + | chr6_2:3350604-3350623 | None:intergenic | 65.0% |
| GGGTCATCGGAAGTGGCGGT+TGG | + | chr6_2:3350650-3350669 | None:intergenic | 65.0% | |
| !! | GGTGGGTGGTGACGGTGATG+AGG | + | chr6_2:3350764-3350783 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGGGTGGTGA+CGG | + | chr6_2:3350772-3350791 | None:intergenic | 65.0% |
| AGAGAGACCAACTCCGCCGC+CGG | + | chr6_2:3350882-3350901 | None:intergenic | 65.0% | |
| ! | CGTCTAGGGCATGACCCCCT+AGG | + | chr6_2:3350604-3350623 | None:intergenic | 65.0% |
| GGGTCATCGGAAGTGGCGGT+TGG | + | chr6_2:3350650-3350669 | None:intergenic | 65.0% | |
| !! | GGTGGGTGGTGACGGTGATG+AGG | + | chr6_2:3350764-3350783 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGGGTGGTGA+CGG | + | chr6_2:3350772-3350791 | None:intergenic | 65.0% |
| AGAGAGACCAACTCCGCCGC+CGG | + | chr6_2:3350882-3350901 | None:intergenic | 65.0% | |
| GACCCCCTAGGGTTGCCACG+TGG | + | chr6_2:3350592-3350611 | None:intergenic | 70.0% | |
| CTCCTAGCACTCTCCGGCGG+CGG | - | chr6_2:3350866-3350885 | Msa0905290:CDS | 70.0% | |
| ACCGTCCACGGCGGCGTTCA+CGG | + | chr6_2:3351185-3351204 | None:intergenic | 70.0% | |
| ! | AGCACCGGAGCCACCGTCCA+CGG | + | chr6_2:3351197-3351216 | None:intergenic | 70.0% |
| GACCCCCTAGGGTTGCCACG+TGG | + | chr6_2:3350592-3350611 | None:intergenic | 70.0% | |
| CTCCTAGCACTCTCCGGCGG+CGG | - | chr6_2:3350866-3350885 | Msa0905290:CDS | 70.0% | |
| ACCGTCCACGGCGGCGTTCA+CGG | + | chr6_2:3351185-3351204 | None:intergenic | 70.0% | |
| ! | AGCACCGGAGCCACCGTCCA+CGG | + | chr6_2:3351197-3351216 | None:intergenic | 70.0% |
| !! | CTCCGCCGCCGGAGAGTGCT+AGG | + | chr6_2:3350871-3350890 | None:intergenic | 75.0% |
| GCACTCTCCGGCGGCGGAGT+TGG | - | chr6_2:3350872-3350891 | Msa0905290:CDS | 75.0% | |
| GTCCACGGCGGCGTTCACGG+CGG | + | chr6_2:3351182-3351201 | None:intergenic | 75.0% | |
| GCCGTGAACGCCGCCGTGGA+CGG | - | chr6_2:3351181-3351200 | Msa0905290:CDS | 75.0% | |
| GTGAACGCCGCCGTGGACGG+TGG | - | chr6_2:3351184-3351203 | Msa0905290:CDS | 75.0% | |
| ACCGGAGCCACCGTCCACGG+CGG | + | chr6_2:3351194-3351213 | None:intergenic | 75.0% | |
| GTGGACGGTGGCTCCGGTGC+TGG | - | chr6_2:3351196-3351215 | Msa0905290:CDS | 75.0% | |
| !! | CTCCGCCGCCGGAGAGTGCT+AGG | + | chr6_2:3350871-3350890 | None:intergenic | 75.0% |
| GCACTCTCCGGCGGCGGAGT+TGG | - | chr6_2:3350872-3350891 | Msa0905290:CDS | 75.0% | |
| GTCCACGGCGGCGTTCACGG+CGG | + | chr6_2:3351182-3351201 | None:intergenic | 75.0% | |
| GCCGTGAACGCCGCCGTGGA+CGG | - | chr6_2:3351181-3351200 | Msa0905290:CDS | 75.0% | |
| GTGAACGCCGCCGTGGACGG+TGG | - | chr6_2:3351184-3351203 | Msa0905290:CDS | 75.0% | |
| ACCGGAGCCACCGTCCACGG+CGG | + | chr6_2:3351194-3351213 | None:intergenic | 75.0% | |
| GTGGACGGTGGCTCCGGTGC+TGG | - | chr6_2:3351196-3351215 | Msa0905290:CDS | 75.0% | |
| ! | GCCGCCGTGGACGGTGGCTC+CGG | - | chr6_2:3351190-3351209 | Msa0905290:CDS | 80.0% |
| ! | GCCGCCGTGGACGGTGGCTC+CGG | - | chr6_2:3351190-3351209 | Msa0905290:CDS | 80.0% |
| ! | CGCCGCCGTGAACGCCGCCG+TGG | - | chr6_2:3351177-3351196 | Msa0905290:CDS | 85.0% |
| ! | CGCCGCCGTGAACGCCGCCG+TGG | - | chr6_2:3351177-3351196 | Msa0905290:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 3350296 | 3351303 | 3350296 | ID=Msa0905290;Name=Msa0905290 |
| chr6_2 | mRNA | 3350296 | 3351303 | 3350296 | ID=Msa0905290-mRNA-1;Parent=Msa0905290;Name=Msa0905290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|335 |
| chr6_2 | exon | 3350296 | 3351303 | 3350296 | ID=Msa0905290-mRNA-1:exon:1015;Parent=Msa0905290-mRNA-1 |
| chr6_2 | CDS | 3350296 | 3351303 | 3350296 | ID=Msa0905290-mRNA-1:cds;Parent=Msa0905290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
