AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1018730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1018730 MtrunA17_Chr7g0234131 82.670 427 46 1 35 433 112 538 0.0 707
Msa1018730 MtrunA17_Chr7g0234111 73.882 425 82 2 34 430 111 534 0.0 620
Msa1018730 MtrunA17_Chr7g0234091 73.412 425 84 2 34 430 111 534 0.0 608
Msa1018730 MtrunA17_Chr7g0230651 59.079 369 117 3 33 373 13 375 2.15e-153 439
Msa1018730 MtrunA17_Chr7g0236731 79.352 247 22 2 79 296 27 273 3.33e-127 369
Msa1018730 MtrunA17_Chr4g0033191 43.269 416 196 5 51 427 103 517 2.21e-108 330
Msa1018730 MtrunA17_Chr4g0033331 41.324 438 216 6 33 431 82 517 2.81e-107 327
Msa1018730 MtrunA17_Chr4g0033401 40.411 438 220 5 33 431 77 512 1.69e-106 325
Msa1018730 MtrunA17_Chr4g0033201 41.346 416 204 4 51 427 96 510 4.56e-106 323
Msa1018730 MtrunA17_Chr4g0033271 42.446 417 198 6 51 427 95 509 1.04e-105 322
Msa1018730 MtrunA17_Chr4g0033311 41.330 421 207 5 46 427 94 513 3.08e-105 322
Msa1018730 MtrunA17_Chr6g0482131 41.330 421 207 6 46 427 91 510 9.78e-105 320
Msa1018730 MtrunA17_Chr2g0329201 41.232 422 206 6 46 427 86 505 3.28e-104 318
Msa1018730 MtrunA17_Chr4g0033321 39.770 435 221 5 33 428 76 508 1.31e-103 317
Msa1018730 MtrunA17_Chr6g0482081 40.758 422 209 6 46 427 91 511 3.45e-103 316
Msa1018730 MtrunA17_Chr3g0088441 41.093 421 208 5 46 427 93 512 4.62e-103 316
Msa1018730 MtrunA17_Chr2g0329191 40.189 423 208 5 46 427 89 507 6.60e-102 312
Msa1018730 MtrunA17_Chr6g0482071 39.663 416 211 4 51 427 97 511 1.01e-101 312
Msa1018730 MtrunA17_Chr4g0033341 40.984 427 213 7 38 427 117 541 2.73e-100 309
Msa1018730 MtrunA17_Chr4g0033231 39.798 397 223 5 46 427 96 491 8.45e-99 304
Msa1018730 MtrunA17_Chr4g0033261 38.647 414 239 5 28 427 79 491 2.98e-96 297
Msa1018730 MtrunA17_Chr4g0043091 37.500 424 219 7 46 427 82 501 2.71e-94 293
Msa1018730 MtrunA17_Chr4g0010501 38.609 417 218 6 46 427 79 492 1.44e-93 290
Msa1018730 MtrunA17_Chr3g0087271 39.036 415 211 7 51 427 98 508 2.64e-92 288
Msa1018730 MtrunA17_Chr4g0006111 39.659 411 213 10 46 427 119 523 1.01e-91 287
Msa1018730 MtrunA17_Chr4g0006131 39.312 407 219 9 46 427 96 499 8.10e-91 284
Msa1018730 MtrunA17_Chr3g0090131 38.107 412 221 8 46 427 75 482 3.47e-90 281
Msa1018730 MtrunA17_Chr3g0090111 37.198 414 221 8 46 427 73 479 1.03e-89 280
Msa1018730 MtrunA17_Chr2g0301231 41.221 393 204 9 59 427 1 390 3.81e-89 276
Msa1018730 MtrunA17_Chr4g0042171 37.063 429 223 8 46 431 78 502 7.85e-89 279
Msa1018730 MtrunA17_Chr7g0242681 39.563 412 205 9 51 427 97 499 1.39e-88 279
Msa1018730 MtrunA17_Chr3g0087261 37.349 415 218 6 51 427 97 507 3.65e-88 277
Msa1018730 MtrunA17_Chr7g0242691 36.830 429 222 8 36 427 77 493 1.26e-87 276
Msa1018730 MtrunA17_Chr2g0329321 35.154 421 207 5 46 427 93 486 2.43e-84 266
Msa1018730 MtrunA17_Chr4g0074551 36.131 429 232 7 38 427 97 522 8.34e-84 267
Msa1018730 MtrunA17_Chr5g0428831 37.767 421 202 10 51 427 84 488 8.60e-84 266
Msa1018730 MtrunA17_Chr6g0482951 35.629 421 227 6 46 428 97 511 3.55e-82 261
Msa1018730 MtrunA17_Chr1g0195611 38.005 421 200 11 51 427 84 487 3.91e-82 261
Msa1018730 MtrunA17_Chr4g0074561 35.363 427 225 7 46 427 90 510 1.25e-81 261
Msa1018730 MtrunA17_Chr6g0482941 36.407 423 221 8 46 428 97 511 1.65e-81 260
Msa1018730 MtrunA17_Chr4g0006971 37.767 421 214 9 51 432 86 497 1.90e-81 260
Msa1018730 MtrunA17_Chr2g0317841 37.237 427 212 10 47 427 87 503 4.54e-81 259
Msa1018730 MtrunA17_Chr5g0430451 35.499 431 201 6 46 427 94 496 5.21e-81 258
Msa1018730 MtrunA17_Chr2g0288021 34.515 423 234 7 46 428 89 508 8.51e-81 258
Msa1018730 MtrunA17_Chr2g0317821 36.768 427 214 10 47 427 87 503 6.81e-80 256
Msa1018730 MtrunA17_Chr2g0288071 35.849 424 227 8 46 428 122 541 7.56e-80 256
Msa1018730 MtrunA17_Chr1g0195641 38.576 337 148 9 51 344 84 404 4.17e-63 209
Msa1018730 MtrunA17_Chr5g0418871 37.091 275 133 3 38 276 29 299 1.10e-60 200
Msa1018730 MtrunA17_Chr7g0227561 46.256 227 67 3 33 231 88 287 2.13e-59 196
Msa1018730 MtrunA17_Chr3g0087201 34.985 323 173 4 140 427 22 342 8.78e-59 196
Msa1018730 MtrunA17_Chr7g0236741 90.000 60 6 0 374 433 9 68 1.91e-32 117
Msa1018730 MtrunA17_Chr3g0087191 53.571 84 39 0 51 134 82 165 8.49e-29 111
Msa1018730 MtrunA17_Chr4g0068871 26.952 397 229 11 55 432 183 537 9.90e-26 110
Msa1018730 MtrunA17_Chr8g0352881 36.765 136 83 1 149 284 26 158 5.09e-24 97.8
Msa1018730 MtrunA17_Chr7g0227581 74.138 58 15 0 238 295 1 58 2.55e-23 92.8
Msa1018730 MtrunA17_Chr7g0227591 70.370 54 16 0 375 428 13 66 8.27e-21 85.9
Msa1018730 MtrunA17_Chr5g0418861 38.824 85 51 1 345 428 7 91 8.16e-16 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1018730 AT2G44480.1 39.857 419 213 6 51 431 95 512 5.47e-99 305
Msa1018730 AT2G44480.3 39.183 416 214 5 51 428 126 540 1.24e-98 305
Msa1018730 AT3G60140.1 38.263 426 216 7 46 427 80 502 7.35e-97 302
Msa1018730 AT2G44460.1 38.186 419 219 5 51 429 88 506 9.04e-97 302
Msa1018730 AT2G44480.2 38.929 411 212 5 59 431 1 410 1.13e-96 296
Msa1018730 AT3G60130.2 40.143 421 214 7 43 427 30 448 1.29e-96 298
Msa1018730 AT3G60130.1 41.019 412 205 7 52 427 91 500 2.38e-96 298
Msa1018730 AT2G44450.1 38.929 411 214 4 52 427 92 500 7.85e-95 295
Msa1018730 AT3G60130.3 39.905 421 204 8 43 427 30 437 1.01e-94 292
Msa1018730 AT1G51470.1 40.625 416 200 9 52 428 103 510 2.96e-93 290
Msa1018730 AT5G44640.1 38.313 415 214 6 52 428 92 502 7.50e-93 289
Msa1018730 AT5G36890.2 39.089 417 218 8 46 430 70 482 2.30e-92 288
Msa1018730 AT2G44470.3 37.232 419 222 5 51 428 88 506 2.32e-92 291
Msa1018730 AT5G36890.1 39.089 417 218 8 46 430 70 482 2.96e-92 287
Msa1018730 AT3G60120.1 38.389 422 220 7 46 427 68 489 1.28e-91 287
Msa1018730 AT1G47600.2 39.277 415 206 7 52 428 103 509 1.30e-91 286
Msa1018730 AT2G44490.1 38.443 424 215 6 51 430 74 495 1.39e-91 288
Msa1018730 AT1G26560.1 37.995 429 219 8 46 431 86 510 5.18e-91 285
Msa1018730 AT1G47600.1 39.423 416 205 8 52 428 103 510 8.53e-91 284
Msa1018730 AT5G24540.1 36.303 449 243 7 21 427 62 509 3.98e-90 283
Msa1018730 AT5G42260.1 38.537 410 210 6 52 423 92 497 8.36e-90 281
Msa1018730 AT5G24550.1 37.232 419 221 7 51 427 91 509 5.52e-88 278
Msa1018730 AT2G25630.1 38.164 414 197 8 52 427 91 483 7.65e-87 273
Msa1018730 AT1G66270.1 36.927 436 231 6 34 428 79 511 5.33e-86 272
Msa1018730 AT1G66280.1 37.241 435 229 7 34 427 79 510 8.26e-86 271
Msa1018730 AT3G03640.1 37.709 419 217 7 52 427 95 512 1.42e-85 271
Msa1018730 AT5G54570.1 34.426 427 233 7 44 427 83 505 3.67e-85 270
Msa1018730 AT3G18080.1 37.028 424 216 10 46 427 93 507 3.85e-84 267
Msa1018730 AT5G54570.2 34.951 412 221 7 59 427 1 408 1.71e-83 263
Msa1018730 AT3G09260.1 36.124 418 227 5 51 428 94 511 2.42e-83 265
Msa1018730 AT2G32860.2 35.765 425 218 9 51 427 154 571 3.65e-83 267
Msa1018730 AT5G28510.1 36.136 440 235 8 34 428 82 520 4.29e-83 265
Msa1018730 AT2G32860.1 35.714 420 224 7 51 427 154 570 1.06e-82 266
Msa1018730 AT4G27830.1 37.143 420 205 9 51 427 81 484 1.15e-82 263
Msa1018730 AT3G21370.1 36.534 427 214 7 51 427 92 511 1.59e-82 263
Msa1018730 AT1G66270.2 36.468 436 231 7 34 428 79 509 1.81e-82 263
Msa1018730 AT5G25980.2 35.059 425 232 6 44 427 101 522 6.93e-82 262
Msa1018730 AT4G27820.1 35.971 417 215 8 51 427 78 482 7.25e-82 261
Msa1018730 AT1G02850.2 35.335 433 236 9 30 427 62 485 7.51e-81 258
Msa1018730 AT1G75940.1 36.009 436 206 9 51 427 96 517 2.27e-80 258
Msa1018730 AT4G27830.2 36.893 412 201 9 59 427 1 396 3.31e-80 254
Msa1018730 AT3G18070.3 35.629 421 224 8 46 430 84 493 9.34e-80 255
Msa1018730 AT4G21760.2 34.353 425 225 7 46 427 108 521 1.03e-79 256
Msa1018730 AT1G61810.1 35.545 422 230 8 46 427 88 507 1.54e-79 255
Msa1018730 AT4G27820.2 36.145 415 201 10 59 427 1 397 1.91e-79 252
Msa1018730 AT4G27820.3 36.145 415 201 10 59 427 1 397 1.91e-79 252
Msa1018730 AT3G62740.1 34.752 423 235 7 37 427 65 478 1.93e-79 254
Msa1018730 AT3G18070.1 35.545 422 231 8 46 431 84 500 2.76e-79 254
Msa1018730 AT1G02850.1 36.520 408 238 9 30 427 62 458 4.05e-79 253
Msa1018730 AT1G61820.1 35.867 421 220 9 51 427 90 504 5.00e-79 254
Msa1018730 AT3G62750.1 36.543 405 220 8 51 427 78 473 7.38e-79 253
Msa1018730 AT3G62750.2 36.543 405 220 8 51 427 104 499 1.12e-78 253
Msa1018730 AT1G52400.3 36.557 424 216 9 51 427 98 515 1.36e-77 250
Msa1018730 AT1G52400.1 36.557 424 216 9 51 427 98 515 1.36e-77 250
Msa1018730 AT1G61810.5 36.207 406 217 8 62 427 4 407 1.45e-77 247
Msa1018730 AT3G62750.6 36.709 395 217 8 59 427 1 388 1.16e-76 244
Msa1018730 AT3G62750.5 36.709 395 217 8 59 427 1 388 1.16e-76 244
Msa1018730 AT1G45191.4 34.709 412 222 8 51 427 84 483 1.68e-76 247
Msa1018730 AT4G21760.1 33.570 423 221 8 46 427 108 511 3.89e-76 247
Msa1018730 AT4G22100.1 35.507 414 222 9 51 427 77 482 9.24e-76 245
Msa1018730 AT3G60140.2 38.438 333 170 4 46 343 80 412 2.06e-75 243
Msa1018730 AT1G45191.2 33.890 419 222 8 51 427 84 489 4.07e-75 243
Msa1018730 AT5G26000.1 34.588 425 223 9 52 429 97 513 1.48e-74 243
Msa1018730 AT1G61810.3 35.208 409 223 8 46 414 88 494 1.66e-74 243
Msa1018730 AT1G45191.6 33.491 424 222 8 51 427 84 494 2.49e-74 241
Msa1018730 AT1G45191.1 33.491 424 222 8 51 427 96 506 3.02e-74 242
Msa1018730 AT2G44470.1 36.088 363 192 4 51 373 88 450 9.29e-72 233
Msa1018730 AT1G60090.2 34.360 422 224 12 51 432 79 487 9.32e-72 234
Msa1018730 AT5G24540.2 35.533 394 212 6 21 373 62 454 4.82e-71 231
Msa1018730 AT1G60090.1 33.100 429 227 10 51 432 79 494 2.05e-70 231
Msa1018730 AT2G44460.2 35.556 360 192 5 110 429 1 360 5.44e-70 228
Msa1018730 AT5G48375.1 35.526 380 182 9 50 406 86 425 2.82e-68 224
Msa1018730 AT5G54570.3 33.602 372 201 6 44 373 83 450 8.05e-68 223
Msa1018730 AT5G25980.3 34.146 369 201 4 44 373 101 466 3.68e-67 221
Msa1018730 AT5G25980.1 34.146 369 201 4 44 373 101 466 3.68e-67 221
Msa1018730 AT3G62740.2 34.511 368 201 6 37 373 65 423 1.14e-65 216
Msa1018730 AT2G44450.2 34.188 351 194 4 112 427 1 349 2.88e-63 208
Msa1018730 AT3G62750.4 35.977 353 190 7 51 376 104 447 5.70e-63 210
Msa1018730 AT1G52400.2 35.501 369 186 8 51 373 98 460 1.15e-59 202
Msa1018730 AT2G44470.2 38.148 270 132 3 51 285 88 357 1.49e-59 199
Msa1018730 AT5G26000.2 34.167 360 184 7 52 366 97 448 1.78e-59 201
Msa1018730 AT1G61820.3 32.970 367 197 8 105 427 4 365 1.86e-58 196
Msa1018730 AT2G44480.4 41.200 250 113 5 51 267 126 374 3.77e-58 196
Msa1018730 AT1G61810.4 34.535 333 182 6 46 343 88 419 1.43e-55 190
Msa1018730 AT3G62750.7 37.945 253 130 4 51 278 78 328 1.60e-54 186
Msa1018730 AT3G62750.8 37.945 253 130 4 51 278 78 328 1.60e-54 186
Msa1018730 AT1G45191.5 35.766 274 141 4 51 291 84 355 6.02e-54 185
Msa1018730 AT1G45191.3 35.766 274 141 4 51 291 84 355 6.91e-54 185
Msa1018730 AT3G62750.3 37.945 253 130 4 51 278 104 354 1.30e-53 185
Msa1018730 AT1G60270.1 38.492 252 120 3 51 269 80 329 3.75e-53 182
Msa1018730 AT2G44480.5 38.095 252 150 2 185 431 56 306 2.69e-52 178
Msa1018730 AT3G18070.4 38.168 262 125 6 46 274 84 341 3.02e-52 180
Msa1018730 AT1G60270.2 38.912 239 111 3 64 269 6 242 5.90e-51 174
Msa1018730 AT3G18070.2 34.036 332 182 6 136 431 93 423 1.08e-50 177
Msa1018730 AT3G18070.7 35.628 247 155 2 188 431 66 311 1.10e-44 158
Msa1018730 AT1G51490.1 39.382 259 119 8 52 278 78 330 1.61e-44 160
Msa1018730 AT1G02850.5 36.327 245 148 5 184 427 271 508 7.05e-43 158
Msa1018730 AT1G02850.5 42.143 140 79 1 30 169 62 199 3.51e-31 125
Msa1018730 AT1G02850.4 36.179 246 148 6 184 427 271 509 2.33e-41 154
Msa1018730 AT1G02850.4 42.143 140 79 1 30 169 62 199 3.68e-31 125
Msa1018730 AT5G16580.1 30.714 280 157 5 136 384 26 299 2.28e-34 130
Msa1018730 AT1G61810.2 35.377 212 103 4 46 224 88 298 1.54e-33 128
Msa1018730 AT3G18070.5 34.025 241 126 4 137 344 94 334 6.30e-32 124
Msa1018730 AT1G02850.3 42.143 140 79 1 30 169 62 199 1.64e-31 125
Msa1018730 AT1G02850.3 36.250 160 96 3 184 343 271 424 7.46e-25 106
Msa1018730 AT3G18070.6 36.306 157 100 0 188 344 66 222 7.90e-26 105
Msa1018730 AT3G06510.1 29.167 120 81 2 54 170 159 277 9.61e-13 70.5
Msa1018730 AT3G06510.1 30.952 168 82 4 262 425 370 507 3.09e-11 65.9
Msa1018730 AT3G06510.2 29.167 120 81 2 54 170 159 277 1.01e-12 70.5
Msa1018730 AT3G06510.2 31.111 180 100 5 262 425 370 541 6.30e-12 68.2

Find 93 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTAATCTTGGTTCTATT+TGG 0.177781 7_1:+39209288 None:intergenic
TGACTTTCAAATAAATAAAT+TGG 0.239419 7_1:-39207145 Msa1018730:three_prime_UTR
TTTCTCATTTGTTGTGAATT+CGG 0.243291 7_1:+39209380 None:intergenic
TGTATAGATGGAACCTTAAA+AGG 0.256228 7_1:-39210614 Msa1018730:intron
AGAATCTACATCACTGAAAA+TGG 0.258729 7_1:-39208790 Msa1018730:intron
TGTTCGTCATTCAATGGATT+TGG 0.262349 7_1:+39208641 None:intergenic
GCAGTTCAAGAGGGAGAAAT+TGG 0.283757 7_1:-39209715 Msa1018730:CDS
AATAATTTGTAGGACCAATA+TGG 0.300027 7_1:-39208883 Msa1018730:intron
AAAGGAAGTACAGACTTTAT+TGG 0.307324 7_1:-39209348 Msa1018730:CDS
TTCTCATTTGTTGTGAATTC+GGG 0.312449 7_1:+39209381 None:intergenic
AACTTACTTAATTGCTGCTT+TGG 0.329115 7_1:+39208583 None:intergenic
TTATACATAGCTTGGAGTTC+CGG 0.337255 7_1:+39210114 None:intergenic
GTTCGTCATTCAATGGATTT+GGG 0.344503 7_1:+39208642 None:intergenic
CAATGGATATTCTAAACATA+TGG 0.345398 7_1:-39207500 Msa1018730:CDS
AAGGAAGTACAGACTTTATT+GGG 0.346048 7_1:-39209347 Msa1018730:CDS
CTAAATGTTCTTATGTTGAT+TGG 0.348569 7_1:-39207383 Msa1018730:exon
TATAATAATCAAACATAAAG+TGG 0.352114 7_1:+39207329 None:intergenic
TCTAAATACCATACAGTTCA+TGG 0.358433 7_1:+39207040 None:intergenic
TATAATTACATGGGAAATCT+AGG 0.368126 7_1:-39210096 Msa1018730:CDS
AAATAAATAAATTGGTTCAA+TGG 0.379265 7_1:-39207137 Msa1018730:three_prime_UTR
ATTGTCAATAGGATTAATCT+TGG 0.383120 7_1:+39209278 None:intergenic
ACAATATATTAGTTGGTCAT+TGG 0.391567 7_1:+39207265 None:intergenic
AAAGACTAACAGATTTCAAA+TGG 0.396482 7_1:-39209627 Msa1018730:CDS
TGTAACAAATTTATTATCTC+CGG 0.401259 7_1:+39213839 None:intergenic
ATCCTGAGGCTTGGAACTAT+AGG 0.402618 7_1:+39209663 None:intergenic
CACTAGTAACATTGTGTAGT+TGG 0.402750 7_1:-39217358 Msa1018730:five_prime_UTR
TGAGCATTGCAAGAGATATA+AGG 0.413944 7_1:-39213811 Msa1018730:intron
GGTCTCTCAACTTGGAGAAA+TGG 0.420193 7_1:-39207362 Msa1018730:three_prime_UTR
AAGGCATCAAAATTGTCAAT+AGG 0.422397 7_1:+39209267 None:intergenic
AAGACATTATATAATCCTTC+GGG 0.425230 7_1:+39208844 None:intergenic
CCATGTAATTATACATAGCT+TGG 0.425885 7_1:+39210106 None:intergenic
GTTCGATGTTCGTCATTCAA+TGG 0.426882 7_1:+39208635 None:intergenic
CAAGACATTATATAATCCTT+CGG 0.426983 7_1:+39208843 None:intergenic
TATTACTCTGCTCCAACATA+TGG 0.427015 7_1:+39211735 None:intergenic
CCAAGCTATGTATAATTACA+TGG 0.427045 7_1:-39210106 Msa1018730:CDS
TCCTGAGGCTTGGAACTATA+GGG 0.430918 7_1:+39209664 None:intergenic
CTTACAGATTCTCCATATGT+TGG 0.434746 7_1:-39211747 Msa1018730:CDS
GCTTTCCAACATTCGGGTCC+AGG 0.435440 7_1:-39217151 Msa1018730:CDS
AGACATAGTTACAACCATAT+TGG 0.442280 7_1:+39208869 None:intergenic
ATGGTGATCGAGTGAAATAT+TGG 0.443015 7_1:-39210152 Msa1018730:CDS
AAAGTATTTGACACTTGATT+CGG 0.448246 7_1:-39207410 Msa1018730:CDS
GATCACCATATGTTTCGAAT+AGG 0.457073 7_1:+39210166 None:intergenic
GCTCTTCAACAAAATATTGA+CGG 0.458526 7_1:-39210370 Msa1018730:CDS
TGTTGATTGGTCTCTCAACT+TGG 0.461636 7_1:-39207370 Msa1018730:three_prime_UTR
AATGGATATTCTAAACATAT+GGG 0.466396 7_1:-39207499 Msa1018730:CDS
AAGACTAACAGATTTCAAAT+GGG 0.467207 7_1:-39209626 Msa1018730:CDS
TTTCTGTTTGGACTTCTAAG+AGG 0.468595 7_1:-39207233 Msa1018730:three_prime_UTR
GAAATGAACAATATATTAGT+TGG 0.477474 7_1:+39207258 None:intergenic
TAGTTCCAAGCCTCAGGATG+TGG 0.490504 7_1:-39209659 Msa1018730:CDS
GAGCTCCTATTCGAAACATA+TGG 0.495479 7_1:-39210171 Msa1018730:CDS
AAGTTGTTCCATGAACTGTA+TGG 0.495518 7_1:-39207048 Msa1018730:three_prime_UTR
GTAACATTGTGTAGTTGGAT+TGG 0.496120 7_1:-39217353 Msa1018730:five_prime_UTR
TCCCTATAGTTCCAAGCCTC+AGG 0.497302 7_1:-39209665 Msa1018730:CDS
AAATCTAGGTTCTTATTCTA+CGG 0.500597 7_1:-39210082 Msa1018730:CDS
AAATGCTCAAACCTTGTGCC+TGG 0.500647 7_1:+39217133 None:intergenic
TCAGATAATTGTACAGATGA+AGG 0.502577 7_1:+39217503 None:intergenic
TTCTCCATCTAAGAAAACTC+TGG 0.512509 7_1:+39217237 None:intergenic
AGTGACGGCGTAAACGTTCG+TGG 0.513350 7_1:-39207562 Msa1018730:CDS
GTGCAACGATTGAAGAAACT+TGG 0.522017 7_1:-39211778 Msa1018730:CDS
AGCATCCACATCCTGAGGCT+TGG 0.530262 7_1:+39209654 None:intergenic
AACATTCGGGTCCAGGCACA+AGG 0.536095 7_1:-39217144 Msa1018730:intron
AAAGGAGGTATAAACAAAGA+AGG 0.536911 7_1:-39210596 Msa1018730:CDS
AAGTGCAGGATAGTCACAAA+AGG 0.542923 7_1:+39210406 None:intergenic
AATGAGAAAGAAATGTTGAA+AGG 0.546175 7_1:-39209366 Msa1018730:CDS
CTCAACTTGGAGAAATGGCA+AGG 0.555234 7_1:-39207357 Msa1018730:three_prime_UTR
GATGCCTTGGCTGTTACAGA+AGG 0.559427 7_1:-39209252 Msa1018730:intron
AAAATAATGAGAAAGCTAGT+GGG 0.562146 7_1:-39209414 Msa1018730:CDS
CTAGTGGATAGTCAAAGTGC+AGG 0.564603 7_1:+39210392 None:intergenic
ATAATAATCAAACATAAAGT+GGG 0.564886 7_1:+39207330 None:intergenic
TGTCATTGTCAAAGTAGTGC+GGG 0.568052 7_1:+39217379 None:intergenic
TTGGACTACATTCAATGAGC+CGG 0.573984 7_1:-39210133 Msa1018730:CDS
GGATAATCCCCGTTGAACAA+AGG 0.578461 7_1:+39209438 None:intergenic
TAACAGATTTCAAATGGGGA+TGG 0.588010 7_1:-39209621 Msa1018730:intron
TTTACCTTCTGTAACAGCCA+AGG 0.591152 7_1:+39209248 None:intergenic
TTGTGCCTGGACCCGAATGT+TGG 0.603731 7_1:+39217146 None:intergenic
TTTGGTAGCATTTATATGTG+CGG 0.604159 7_1:+39208601 None:intergenic
TCAACTTGGAGAAATGGCAA+GGG 0.611609 7_1:-39207356 Msa1018730:three_prime_UTR
TGAGCAGCATCCACATCCTG+AGG 0.615247 7_1:+39209649 None:intergenic
TTGACATAGGCAGTTCAAGA+GGG 0.626479 7_1:-39209724 Msa1018730:intron
CAAGCTATGTATAATTACAT+GGG 0.633314 7_1:-39210105 Msa1018730:CDS
TCTAGGTTCTTATTCTACGG+AGG 0.635634 7_1:-39210079 Msa1018730:CDS
GTGTCATTGTCAAAGTAGTG+CGG 0.637758 7_1:+39217378 None:intergenic
AAATAATGAGAAAGCTAGTG+GGG 0.638767 7_1:-39209413 Msa1018730:CDS
AGACTAACAGATTTCAAATG+GGG 0.641684 7_1:-39209625 Msa1018730:CDS
TTTATGTTATAAATAAAATG+CGG 0.644405 7_1:-39207296 Msa1018730:three_prime_UTR
ATGGATATTCTAAACATATG+GGG 0.647267 7_1:-39207498 Msa1018730:CDS
TGTAACTATGTCTACCCCGA+AGG 0.653655 7_1:-39208859 Msa1018730:CDS
ATCAACGAGTTACTCAACAA+TGG 0.658866 7_1:-39210551 Msa1018730:intron
TGTTGGAGCAGAGTAATACC+AGG 0.658908 7_1:-39211730 Msa1018730:intron
TTTGACATAGGCAGTTCAAG+AGG 0.664429 7_1:-39209725 Msa1018730:intron
ATAGATGGAACCTTAAAAGG+AGG 0.682953 7_1:-39210611 Msa1018730:intron
TTTAGAGCCTTTGTTCAACG+GGG 0.698307 7_1:-39209445 Msa1018730:CDS
AGACATTATATAATCCTTCG+GGG 0.774274 7_1:+39208845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAATAAATAA+AGG - chr7_1:39208160-39208179 Msa1018730:intron 0.0%
!!! TTTTTTAAAAAAAAAAATTA+CGG - chr7_1:39211258-39211277 Msa1018730:intron 0.0%
!!! AGTTTTTTTTTTTTTTTTTG+TGG - chr7_1:39207962-39207981 Msa1018730:intron 10.0%
!!! GTATAATTTTTTTTTTTTGA+GGG + chr7_1:39209078-39209097 None:intergenic 10.0%
!!! AGTATAATTTTTTTTTTTTG+AGG + chr7_1:39209079-39209098 None:intergenic 10.0%
!! TCTTAAAAATATAAGTTATT+CGG - chr7_1:39209730-39209749 Msa1018730:intron 10.0%
!! TCTATGAAATATATATTAAA+TGG - chr7_1:39209868-39209887 Msa1018730:intron 10.0%
!!! TTATATGTTTTCTTTTTTAA+TGG - chr7_1:39210933-39210952 Msa1018730:intron 10.0%
!!! TTTATTTGTTTTAATTTGAA+TGG - chr7_1:39212661-39212680 Msa1018730:intron 10.0%
!! ATATATCGTATATAATTATA+TGG - chr7_1:39213574-39213593 Msa1018730:intron 10.0%
!!! TTTTTTTTTTTTTTTTGAAG+AGG + chr7_1:39213664-39213683 None:intergenic 10.0%
!! TTAATTATTGCAATAAATAT+TGG + chr7_1:39213966-39213985 None:intergenic 10.0%
!!! TTATGTTAAAATCAAATTTT+AGG - chr7_1:39214261-39214280 Msa1018730:intron 10.0%
!! GATATATATATATATTTCTT+TGG - chr7_1:39214950-39214969 Msa1018730:intron 10.0%
!!! CAATTATTTTAAAAATAGAA+TGG + chr7_1:39215272-39215291 None:intergenic 10.0%
!!! CATTCTATTTTTAAAATAAT+TGG - chr7_1:39215270-39215289 Msa1018730:intron 10.0%
!!! TATAAAGAATGATATTTTTT+AGG - chr7_1:39215501-39215520 Msa1018730:intron 10.0%
!!! ATAAAGAATGATATTTTTTA+GGG - chr7_1:39215502-39215521 Msa1018730:intron 10.0%
!!! TATCTAATTTTTATTTTCTA+AGG - chr7_1:39215950-39215969 Msa1018730:intron 10.0%
!! AAAATATATGTAATATCAAA+AGG - chr7_1:39216763-39216782 Msa1018730:intron 10.0%
!! TTTATGTTATAAATAAAATG+CGG - chr7_1:39217180-39217199 Msa1018730:CDS 10.0%
!! ATTTCTAATGTAAATAAGTA+GGG - chr7_1:39207500-39207519 Msa1018730:CDS 15.0%
!! AAAAGATAAAGGATTAAATT+GGG + chr7_1:39207625-39207644 None:intergenic 15.0%
!! AAAAAGATAAAGGATTAAAT+TGG + chr7_1:39207626-39207645 None:intergenic 15.0%
!! TATAAACATAAAGATCAAAA+TGG - chr7_1:39208102-39208121 Msa1018730:intron 15.0%
!! ATAAACATAAAGATCAAAAT+GGG - chr7_1:39208103-39208122 Msa1018730:intron 15.0%
!! GATAAAATAGTATAATTGAA+TGG + chr7_1:39209054-39209073 None:intergenic 15.0%
!! TCATAATTTAACACTATTAT+AGG - chr7_1:39209173-39209192 Msa1018730:intron 15.0%
!!! TATAATAAATTTTGACGAAT+AGG + chr7_1:39209212-39209231 None:intergenic 15.0%
!! GTAATAGAAAAATTGATAAA+CGG - chr7_1:39209236-39209255 Msa1018730:intron 15.0%
!! TAATAGAAAAATTGATAAAC+GGG - chr7_1:39209237-39209256 Msa1018730:intron 15.0%
!! TAAAAAAAATAAACTAGCAA+AGG - chr7_1:39209319-39209338 Msa1018730:CDS 15.0%
!! GTTACATTTAAATAACTTAA+AGG + chr7_1:39209570-39209589 None:intergenic 15.0%
!! GTTATTTAAATGTAACAAAT+TGG - chr7_1:39209574-39209593 Msa1018730:intron 15.0%
!! CTTAAAAATATAAGTTATTC+GGG - chr7_1:39209731-39209750 Msa1018730:intron 15.0%
!! TTAAAAATATAAGTTATTCG+GGG - chr7_1:39209732-39209751 Msa1018730:intron 15.0%
!! GTTACAATTAAAAAACTTAA+AGG - chr7_1:39209762-39209781 Msa1018730:intron 15.0%
!! ATATATATTTCATAGAAGTT+TGG + chr7_1:39209864-39209883 None:intergenic 15.0%
!! CAGTTGTTAATTATTAATAT+TGG + chr7_1:39209900-39209919 None:intergenic 15.0%
!! CAATATTAATAATTAACAAC+TGG - chr7_1:39209898-39209917 Msa1018730:intron 15.0%
!! GTTACAATTAAATAACTTAA+AGG - chr7_1:39210190-39210209 Msa1018730:CDS 15.0%
!! GTTATAATTAGATAACTTAA+AGG - chr7_1:39210255-39210274 Msa1018730:intron 15.0%
!!! ATTTAACCTAGTTTTTTTTA+GGG - chr7_1:39210289-39210308 Msa1018730:intron 15.0%
!! TATATACTACATATTCTATA+AGG + chr7_1:39210480-39210499 None:intergenic 15.0%
!!! TTCTTATTTTGATAAGAATA+TGG - chr7_1:39210838-39210857 Msa1018730:intron 15.0%
!!! CTATACTATTTATTGTTTTT+TGG + chr7_1:39210979-39210998 None:intergenic 15.0%
!! TAAGAATTTCCATATTTAAA+GGG + chr7_1:39211826-39211845 None:intergenic 15.0%
!!! TTTTATTTCTAAAAATTAGC+AGG - chr7_1:39212918-39212937 Msa1018730:intron 15.0%
!!! TAATTTTTTTCTCTTCATTA+GGG + chr7_1:39212974-39212993 None:intergenic 15.0%
!!! ATAATTTTTTTCTCTTCATT+AGG + chr7_1:39212975-39212994 None:intergenic 15.0%
!! TATATTTCTTTACATAAAGA+TGG - chr7_1:39213001-39213020 Msa1018730:intron 15.0%
!!! ATCAAAAAGTTTTTAAGTTA+AGG - chr7_1:39213452-39213471 Msa1018730:intron 15.0%
!!! TCAAAAAGTTTTTAAGTTAA+GGG - chr7_1:39213453-39213472 Msa1018730:intron 15.0%
!!! TATTCCTTAAACTTATTTTT+AGG + chr7_1:39213518-39213537 None:intergenic 15.0%
!! ATTATTATATATTGCAAGAA+AGG + chr7_1:39213808-39213827 None:intergenic 15.0%
!!! ATTATTGCTATTACATTAAT+CGG + chr7_1:39214626-39214645 None:intergenic 15.0%
!!! CATATCAAATTTTTATTTTG+CGG - chr7_1:39214985-39215004 Msa1018730:intron 15.0%
!! TTAAAATAATTGGTATACAA+AGG - chr7_1:39215280-39215299 Msa1018730:intron 15.0%
!! AATTTAATTCATAGAGTTTA+TGG + chr7_1:39215339-39215358 None:intergenic 15.0%
!!! TAAAGAATGATATTTTTTAG+GGG - chr7_1:39215503-39215522 Msa1018730:intron 15.0%
!!! AATTATTAACTAGATTTTCT+CGG - chr7_1:39216089-39216108 Msa1018730:intron 15.0%
!! ACTAAAATTGCAAATATTAA+AGG + chr7_1:39216553-39216572 None:intergenic 15.0%
!! ACAAAAATTACAAATCTTAA+GGG + chr7_1:39216741-39216760 None:intergenic 15.0%
!! AACAAAAATTACAAATCTTA+AGG + chr7_1:39216742-39216761 None:intergenic 15.0%
!! ATAATAATCAAACATAAAGT+GGG + chr7_1:39217149-39217168 None:intergenic 15.0%
!! TATAATAATCAAACATAAAG+TGG + chr7_1:39217150-39217169 None:intergenic 15.0%
!! TGACTTTCAAATAAATAAAT+TGG - chr7_1:39217331-39217350 Msa1018730:five_prime_UTR 15.0%
!!! AAATAAATAAATTGGTTCAA+TGG - chr7_1:39217339-39217358 Msa1018730:five_prime_UTR 15.0%
!! ATTGGTAAAAAAAGGTTATT+TGG - chr7_1:39207141-39207160 Msa1018730:three_prime_UTR 20.0%
!! AAAAAAGTGAGACAAATTAA+TGG - chr7_1:39207419-39207438 Msa1018730:CDS 20.0%
!! ACATTAGAAATGAATTCTAT+CGG + chr7_1:39207491-39207510 None:intergenic 20.0%
!! CATTTCTAATGTAAATAAGT+AGG - chr7_1:39207499-39207518 Msa1018730:CDS 20.0%
!! ATATAAAAGGACAAAAATGT+TGG + chr7_1:39207654-39207673 None:intergenic 20.0%
!!! TTGGAGATTTTAGATATAAA+AGG + chr7_1:39207667-39207686 None:intergenic 20.0%
!!! TGGTTTTTTTTTTGAGTTTA+TGG - chr7_1:39207919-39207938 Msa1018730:intron 20.0%
!!! GGTTTTTTTTTTGAGTTTAT+GGG - chr7_1:39207920-39207939 Msa1018730:intron 20.0%
!!! TTACGAGTTTTATATGAAAA+AGG - chr7_1:39208062-39208081 Msa1018730:intron 20.0%
!! TTACCTAAAATTAAGTTAAG+AGG - chr7_1:39208192-39208211 Msa1018730:intron 20.0%
!!! AAGATAGTTAATTTTGTAAG+AGG - chr7_1:39208400-39208419 Msa1018730:intron 20.0%
!! GTAAAAATAGAAAGAAAAAG+CGG + chr7_1:39209032-39209051 None:intergenic 20.0%
!! AATTAATTAACCGCTAAAAT+TGG + chr7_1:39209487-39209506 None:intergenic 20.0%
!!! TTTTTTTTTCCCTATTCATT+TGG - chr7_1:39209505-39209524 Msa1018730:intron 20.0%
!!! TTTTTTTTCCCTATTCATTT+GGG - chr7_1:39209506-39209525 Msa1018730:intron 20.0%
!! TAGTACGAAAAAAAACTTAA+AGG + chr7_1:39209601-39209620 None:intergenic 20.0%
!! ATACTATATAAGCAAAATCT+AGG - chr7_1:39210121-39210140 Msa1018730:CDS 20.0%
!! TACTATATAAGCAAAATCTA+GGG - chr7_1:39210122-39210141 Msa1018730:CDS 20.0%
!!! GATTTAACCTAGTTTTTTTT+AGG - chr7_1:39210288-39210307 Msa1018730:intron 20.0%
!!! TTTAACCTAGTTTTTTTTAG+GGG - chr7_1:39210290-39210309 Msa1018730:intron 20.0%
!! TGTAACAAATTTATTATCTC+CGG + chr7_1:39210640-39210659 None:intergenic 20.0%
!! AAAAATGAGATTGTTAAAAG+AGG - chr7_1:39211178-39211197 Msa1018730:intron 20.0%
!! AAAATGAGATTGTTAAAAGA+GGG - chr7_1:39211179-39211198 Msa1018730:intron 20.0%
!!! ACTATACTTTTCATTTTGTA+AGG - chr7_1:39211573-39211592 Msa1018730:intron 20.0%
!! AAGAATTTCCATATTTAAAG+GGG + chr7_1:39211825-39211844 None:intergenic 20.0%
!! GTAAGAATTTCCATATTTAA+AGG + chr7_1:39211827-39211846 None:intergenic 20.0%
!! TTGAATTACATAAGTATTTC+AGG + chr7_1:39211915-39211934 None:intergenic 20.0%
!!! GTATTCACACAATTTTATTT+TGG + chr7_1:39212059-39212078 None:intergenic 20.0%
!! ATATGCAAACAATTTATTCA+AGG + chr7_1:39212587-39212606 None:intergenic 20.0%
!! AAAACACTAGATCTATAATT+TGG - chr7_1:39213317-39213336 Msa1018730:intron 20.0%
!! AAACACTAGATCTATAATTT+GGG - chr7_1:39213318-39213337 Msa1018730:intron 20.0%
!! GAAACCTAAAAATAAGTTTA+AGG - chr7_1:39213511-39213530 Msa1018730:intron 20.0%
!! ATAATTATATGGATATTCAG+AGG - chr7_1:39213585-39213604 Msa1018730:intron 20.0%
!! ATTCAAGTAAATTTACACAA+TGG + chr7_1:39214146-39214165 None:intergenic 20.0%
!!! TTTAAGGTTGAATCAATTTA+TGG + chr7_1:39214194-39214213 None:intergenic 20.0%
!!! ATTTTTGTGAGACTAATTTA+AGG + chr7_1:39214210-39214229 None:intergenic 20.0%
!!! AAATTTTAGGAAACATTTCA+AGG - chr7_1:39214274-39214293 Msa1018730:intron 20.0%
!! AAAATTGCATGTTACATATA+TGG - chr7_1:39214536-39214555 Msa1018730:intron 20.0%
!!! TTATTGCTATTACATTAATC+GGG + chr7_1:39214625-39214644 None:intergenic 20.0%
!! TTCCATTAAATATTTGACAT+AGG - chr7_1:39214739-39214758 Msa1018730:intron 20.0%
!! TATAAAACACAAAATATGAG+TGG + chr7_1:39214907-39214926 None:intergenic 20.0%
!!! AAAGAATGATATTTTTTAGG+GGG - chr7_1:39215504-39215523 Msa1018730:intron 20.0%
!!! GTTCACTTTTAATAATTTGT+AGG - chr7_1:39215583-39215602 Msa1018730:intron 20.0%
!! TGTAAAAACAATGATGATTA+GGG + chr7_1:39216495-39216514 None:intergenic 20.0%
!! AATGGATATTCTAAACATAT+GGG - chr7_1:39216977-39216996 Msa1018730:intron 20.0%
!! GAAATGAACAATATATTAGT+TGG + chr7_1:39217221-39217240 None:intergenic 20.0%
! CCAAAGATAAAAAACTACTA+AGG + chr7_1:39207042-39207061 None:intergenic 25.0%
!!! CCTTAGTAGTTTTTTATCTT+TGG - chr7_1:39207039-39207058 Msa1018730:three_prime_UTR 25.0%
! CTTACTTGAAATTAAGTTAG+AGG + chr7_1:39207587-39207606 None:intergenic 25.0%
! AAAGGATTAAATTGGGATAA+AGG + chr7_1:39207618-39207637 None:intergenic 25.0%
! GTTGGCATTTAAAAAGATAA+AGG + chr7_1:39207636-39207655 None:intergenic 25.0%
!! TGATGAACTTTATGAGTTTT+TGG + chr7_1:39207686-39207705 None:intergenic 25.0%
! GTTTAAGAGAAACTAAAAGA+AGG + chr7_1:39207838-39207857 None:intergenic 25.0%
!!! CAAAAAAAGAATCTGCTTTT+TGG - chr7_1:39207857-39207876 Msa1018730:intron 25.0%
!!! TTTTTTTTTTTTGTGGTGTC+CGG - chr7_1:39207969-39207988 Msa1018730:intron 25.0%
!! TAGCCTCTTAACTTAATTTT+AGG + chr7_1:39208198-39208217 None:intergenic 25.0%
! ATAATGAATGTTACTATTGC+AGG - chr7_1:39208531-39208550 Msa1018730:intron 25.0%
! CAATCACAAAAAATTACCAT+AGG + chr7_1:39208873-39208892 None:intergenic 25.0%
!! TTTTTGTGATTGTAGATTGA+AGG - chr7_1:39208881-39208900 Msa1018730:intron 25.0%
!! TATTTGAACTCCAATTTTAG+CGG - chr7_1:39209474-39209493 Msa1018730:intron 25.0%
! TACATATTCCCAAATGAATA+GGG + chr7_1:39209517-39209536 None:intergenic 25.0%
! TAAATAACTTAAAGGACCTA+CGG + chr7_1:39209562-39209581 None:intergenic 25.0%
!!! AGTTTTTTTTCGTACTACTT+AGG - chr7_1:39209604-39209623 Msa1018730:intron 25.0%
! TCGTACGAAAAAAAACTTAA+AGG + chr7_1:39209662-39209681 None:intergenic 25.0%
! GTTACGGTTAAATAACTAAA+AGG + chr7_1:39209692-39209711 None:intergenic 25.0%
! TGAAATTCGACAAATTGTTA+CGG + chr7_1:39209708-39209727 None:intergenic 25.0%
! GGATCTTGACTTAAATATTT+GGG - chr7_1:39209834-39209853 Msa1018730:intron 25.0%
! GATCTTGACTTAAATATTTG+GGG - chr7_1:39209835-39209854 Msa1018730:intron 25.0%
! ATCTTGACTTAAATATTTGG+GGG - chr7_1:39209836-39209855 Msa1018730:intron 25.0%
!!! CATACAAAAACGATTTTGAT+GGG + chr7_1:39209973-39209992 None:intergenic 25.0%
!! ACATACAAAAACGATTTTGA+TGG + chr7_1:39209974-39209993 None:intergenic 25.0%
! ACTATATAAGCAAAATCTAG+GGG - chr7_1:39210123-39210142 Msa1018730:CDS 25.0%
! TATTTAATTGTAACAAGCAG+TGG + chr7_1:39210184-39210203 None:intergenic 25.0%
! GATATAAACTTAAATGACCA+TGG - chr7_1:39210231-39210250 Msa1018730:intron 25.0%
! GTTATCTAATTATAACACCA+TGG + chr7_1:39210251-39210270 None:intergenic 25.0%
! AAAAACTAGGTTAAATCACA+CGG + chr7_1:39210285-39210304 None:intergenic 25.0%
!! ATTGTTAAAAGAGGGAATTT+TGG - chr7_1:39211187-39211206 Msa1018730:intron 25.0%
!! TTTGGATTGATAATTTAGGA+GGG + chr7_1:39211416-39211435 None:intergenic 25.0%
!! TGTGTTTGGATTGATAATTT+AGG + chr7_1:39211420-39211439 None:intergenic 25.0%
! AAGGATAGTGCTAATTAATT+TGG - chr7_1:39211531-39211550 Msa1018730:intron 25.0%
!! ATTTTGTAAGGCTTCAAAAA+AGG - chr7_1:39211585-39211604 Msa1018730:intron 25.0%
! CGTATGTATAAACTTTCAAA+TGG - chr7_1:39211615-39211634 Msa1018730:intron 25.0%
! AAATGTTAAATCAAGCTCAT+AGG - chr7_1:39211933-39211952 Msa1018730:intron 25.0%
!!! TGAAATGATTCTAGGATAAT+GGG + chr7_1:39212009-39212028 None:intergenic 25.0%
!!! TTGAAATGATTCTAGGATAA+TGG + chr7_1:39212010-39212029 None:intergenic 25.0%
! TTATCCTAGAATCATTTCAA+AGG - chr7_1:39212010-39212029 Msa1018730:intron 25.0%
! AGAAAAATAAGCAAAATCGT+AGG - chr7_1:39212093-39212112 Msa1018730:intron 25.0%
! AACTACCATGAATACATTAT+CGG - chr7_1:39212141-39212160 Msa1018730:intron 25.0%
! AATGATTGACAATGTTGTAA+TGG + chr7_1:39212187-39212206 None:intergenic 25.0%
! AACATTGTCAATCATTTCAT+GGG - chr7_1:39212191-39212210 Msa1018730:intron 25.0%
! GTCATATTAGAAGAAAACAT+TGG - chr7_1:39212222-39212241 Msa1018730:intron 25.0%
! AACATTATTAAGTCACCTAT+TGG + chr7_1:39212444-39212463 None:intergenic 25.0%
!! AGGTGACTTAATAATGTTTT+TGG - chr7_1:39212446-39212465 Msa1018730:intron 25.0%
!!! CATAGTTTCTTTTGTTGTAA+TGG - chr7_1:39212540-39212559 Msa1018730:intron 25.0%
! ATTTATTCAAGGTAGTACAA+GGG + chr7_1:39212576-39212595 None:intergenic 25.0%
! AATTTATTCAAGGTAGTACA+AGG + chr7_1:39212577-39212596 None:intergenic 25.0%
! TGAATTAACAAGTTACTCTT+TGG + chr7_1:39212820-39212839 None:intergenic 25.0%
!!! AAAGAGTAACTTGTTAATTC+AGG - chr7_1:39212819-39212838 Msa1018730:intron 25.0%
!!! AAGAGTAACTTGTTAATTCA+GGG - chr7_1:39212820-39212839 Msa1018730:intron 25.0%
!!! AGTACATTCATTAGTTTTTG+TGG - chr7_1:39212851-39212870 Msa1018730:intron 25.0%
! TCTAAAAATTAGCAGGTTTA+TGG - chr7_1:39212925-39212944 Msa1018730:intron 25.0%
! CCAACATTGAATGTTATATT+TGG + chr7_1:39213162-39213181 None:intergenic 25.0%
! CCAAATATAACATTCAATGT+TGG - chr7_1:39213159-39213178 Msa1018730:intron 25.0%
! AGTAGTTGTACAACAAATTT+AGG + chr7_1:39213194-39213213 None:intergenic 25.0%
!!! GGGATGTCATATTTTATTTT+CGG - chr7_1:39213232-39213251 Msa1018730:intron 25.0%
! TATCACTTTCCTTTCTATTT+AGG - chr7_1:39213256-39213275 Msa1018730:intron 25.0%
! CACCTAATAAGCATAAATAT+AGG - chr7_1:39213372-39213391 Msa1018730:intron 25.0%
! GTCCTATATTTATGCTTATT+AGG + chr7_1:39213377-39213396 None:intergenic 25.0%
! TTAGTCAAACAAAATGCTAA+CGG - chr7_1:39213416-39213435 Msa1018730:intron 25.0%
! ATATAAAGAGTTGTACCAAA+TGG - chr7_1:39213610-39213629 Msa1018730:intron 25.0%
!! TTTGTTTATACCTCCTTTTA+AGG + chr7_1:39213878-39213897 None:intergenic 25.0%
! CAAGCTATGTATAATTACAT+GGG - chr7_1:39214371-39214390 Msa1018730:intron 25.0%
! TATAATTACATGGGAAATCT+AGG - chr7_1:39214380-39214399 Msa1018730:intron 25.0%
! AAATCTAGGTTCTTATTCTA+CGG - chr7_1:39214394-39214413 Msa1018730:intron 25.0%
!! TATTGCTATTACATTAATCG+GGG + chr7_1:39214624-39214643 None:intergenic 25.0%
! TGCCTATGTCAAATATTTAA+TGG + chr7_1:39214744-39214763 None:intergenic 25.0%
! AAAGACTAACAGATTTCAAA+TGG - chr7_1:39214849-39214868 Msa1018730:intron 25.0%
! AAGACTAACAGATTTCAAAT+GGG - chr7_1:39214850-39214869 Msa1018730:intron 25.0%
!!! ACTAGCTTTCTCATTATTTT+TGG + chr7_1:39215062-39215081 None:intergenic 25.0%
! AAAAATAATGAGAAAGCTAG+TGG - chr7_1:39215061-39215080 Msa1018730:intron 25.0%
! AAAATAATGAGAAAGCTAGT+GGG - chr7_1:39215062-39215081 Msa1018730:intron 25.0%
!!! TTTCTCATTTGTTGTGAATT+CGG + chr7_1:39215099-39215118 None:intergenic 25.0%
! AATGAGAAAGAAATGTTGAA+AGG - chr7_1:39215110-39215129 Msa1018730:intron 25.0%
! ATTGTCAATAGGATTAATCT+TGG + chr7_1:39215201-39215220 None:intergenic 25.0%
!! AATAATTTGTAGGACCAATA+TGG - chr7_1:39215593-39215612 Msa1018730:intron 25.0%
! AAGACATTATATAATCCTTC+GGG + chr7_1:39215635-39215654 None:intergenic 25.0%
! CAAGACATTATATAATCCTT+CGG + chr7_1:39215636-39215655 None:intergenic 25.0%
!!! TTTTCCACATCTTTAGAATT+TGG - chr7_1:39215919-39215938 Msa1018730:intron 25.0%
! GTGTAAAAACAATGATGATT+AGG + chr7_1:39216496-39216515 None:intergenic 25.0%
! TATTGTATTGTTCACTTTGA+AGG - chr7_1:39216519-39216538 Msa1018730:intron 25.0%
! GTGTAAAAACAATGATGATT+AGG + chr7_1:39216496-39216515 None:intergenic 25.0%
! TATTGTATTGTTCACTTTGA+AGG - chr7_1:39216519-39216538 Msa1018730:intron 25.0%
! CAAAGAAACATTAGTATGAT+AGG - chr7_1:39216808-39216827 Msa1018730:intron 25.0%
! CATTAAAGATCAAATTCTTG+TGG + chr7_1:39216873-39216892 None:intergenic 25.0%
!!! TGTTTTTACATTGATAGTGA+CGG - chr7_1:39216899-39216918 Msa1018730:intron 25.0%
! CAATGGATATTCTAAACATA+TGG - chr7_1:39216976-39216995 Msa1018730:intron 25.0%
! ATGGATATTCTAAACATATG+GGG - chr7_1:39216978-39216997 Msa1018730:intron 25.0%
!! AAAGTATTTGACACTTGATT+CGG - chr7_1:39217066-39217085 Msa1018730:intron 25.0%
! CTAAATGTTCTTATGTTGAT+TGG - chr7_1:39217093-39217112 Msa1018730:intron 25.0%
! ACAATATATTAGTTGGTCAT+TGG + chr7_1:39217214-39217233 None:intergenic 25.0%
!! TGTTCATTTCTTTTTCTGTT+TGG - chr7_1:39217231-39217250 Msa1018730:exon 25.0%
TCAGATAATTGTACAGATGA+AGG + chr7_1:39206976-39206995 None:intergenic 30.0%
!! GTAGTTGGATTGGTAAAAAA+AGG - chr7_1:39207133-39207152 Msa1018730:three_prime_UTR 30.0%
! TTTTCCAGAGTTTTCTTAGA+TGG - chr7_1:39207235-39207254 Msa1018730:three_prime_UTR 30.0%
! GTTTTCTTAGATGGAGAAAA+TGG - chr7_1:39207244-39207263 Msa1018730:three_prime_UTR 30.0%
!! TTGTTTTGCTTTCCAACATT+CGG - chr7_1:39207318-39207337 Msa1018730:three_prime_UTR 30.0%
! ATGTAAATAAGTAGGGTGTT+CGG - chr7_1:39207507-39207526 Msa1018730:CDS 30.0%
!! TGAGAATTTTGATGAGTTTC+TGG + chr7_1:39207715-39207734 None:intergenic 30.0%
CATATCTTCATCATCTTAAG+TGG - chr7_1:39207733-39207752 Msa1018730:intron 30.0%
!!! GGATTTTTTGTATGAGTTTC+TGG - chr7_1:39207899-39207918 Msa1018730:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr7_1:39208010-39208029 None:intergenic 30.0%
CACATGGATAATACATTGTT+AGG + chr7_1:39208234-39208253 None:intergenic 30.0%
! TTTAGAATTCATGACGAAGA+CGG + chr7_1:39208353-39208372 None:intergenic 30.0%
TCTACTTCACAGGTAATTAT+TGG - chr7_1:39208597-39208616 Msa1018730:CDS 30.0%
TATGAATCAAATTGTGCCTA+TGG + chr7_1:39208641-39208660 None:intergenic 30.0%
ATTGAAGAAAGTGGATATCA+TGG - chr7_1:39208935-39208954 Msa1018730:intron 30.0%
ATCCATACCTGTATATATAG+AGG - chr7_1:39208989-39209008 Msa1018730:intron 30.0%
TCCATACCTGTATATATAGA+GGG - chr7_1:39208990-39209009 Msa1018730:intron 30.0%
ATTAGTGTTTGTCTTTCTAC+CGG - chr7_1:39209262-39209281 Msa1018730:CDS 30.0%
! TCTACCGGTTAAAGATAAAA+CGG - chr7_1:39209277-39209296 Msa1018730:CDS 30.0%
! AGTACCGTTTTATCTTTAAC+CGG + chr7_1:39209284-39209303 None:intergenic 30.0%
CTACATATTCCCAAATGAAT+AGG + chr7_1:39209518-39209537 None:intergenic 30.0%
!!! GGGAATATGTAGTAGTTTTT+TGG - chr7_1:39209526-39209545 Msa1018730:intron 30.0%
GTGTTACGAAGAATACTTAA+AGG - chr7_1:39209791-39209810 Msa1018730:intron 30.0%
CGGATCTTGACTTAAATATT+TGG - chr7_1:39209833-39209852 Msa1018730:intron 30.0%
ATGAATTGTTTGAAAGTAGC+AGG - chr7_1:39209930-39209949 Msa1018730:intron 30.0%
AAAACTAGGTTAAATCACAC+GGG + chr7_1:39210284-39210303 None:intergenic 30.0%
TTCAACCCCTAAAAAAAACT+AGG + chr7_1:39210298-39210317 None:intergenic 30.0%
TGTGACAAAAAAAAGGAGAT+AGG + chr7_1:39210392-39210411 None:intergenic 30.0%
TCCATCCAAAATGAAGATTA+AGG - chr7_1:39210430-39210449 Msa1018730:intron 30.0%
CCATCCAAAATGAAGATTAA+GGG - chr7_1:39210431-39210450 Msa1018730:intron 30.0%
CATCCAAAATGAAGATTAAG+GGG - chr7_1:39210432-39210451 Msa1018730:intron 30.0%
AAAATGAAGATTAAGGGGAT+GGG - chr7_1:39210437-39210456 Msa1018730:intron 30.0%
! AGATTAAGGAGAGATTTTGA+TGG + chr7_1:39210864-39210883 None:intergenic 30.0%
!!! GTTATTTTAGACCAGAGATT+TGG + chr7_1:39211113-39211132 None:intergenic 30.0%
AATAACCAAATTACCCATTG+TGG - chr7_1:39211127-39211146 Msa1018730:intron 30.0%
! TTGGATTGATAATTTAGGAG+GGG + chr7_1:39211415-39211434 None:intergenic 30.0%
! GTTTGGATTGATAATTTAGG+AGG + chr7_1:39211417-39211436 None:intergenic 30.0%
! ACTTTCAAATGGATTTCCTT+TGG - chr7_1:39211626-39211645 Msa1018730:intron 30.0%
! CTTTCAAATGGATTTCCTTT+GGG - chr7_1:39211627-39211646 Msa1018730:intron 30.0%
GTGTGCAAACAAAAGAATTT+AGG - chr7_1:39211697-39211716 Msa1018730:intron 30.0%
TGCAAACAAAAGAATTTAGG+AGG - chr7_1:39211700-39211719 Msa1018730:intron 30.0%
!!! ACATAGTTTTATTAGCGAAG+TGG - chr7_1:39211752-39211771 Msa1018730:CDS 30.0%
! TTTTATTAGCGAAGTGGAAA+TGG - chr7_1:39211758-39211777 Msa1018730:CDS 30.0%
! AGTTGATACTAATACTCTCT+AGG - chr7_1:39211789-39211808 Msa1018730:intron 30.0%
GTTGATACTAATACTCTCTA+GGG - chr7_1:39211790-39211809 Msa1018730:intron 30.0%
! TACATAAGTATTTCAGGTGT+GGG + chr7_1:39211909-39211928 None:intergenic 30.0%
! TTACATAAGTATTTCAGGTG+TGG + chr7_1:39211910-39211929 None:intergenic 30.0%
!! CTTTCCTTTGAAATGATTCT+AGG + chr7_1:39212017-39212036 None:intergenic 30.0%
AAGCAAAATCGTAGGATATT+AGG - chr7_1:39212101-39212120 Msa1018730:intron 30.0%
CAACATTGTCAATCATTTCA+TGG - chr7_1:39212190-39212209 Msa1018730:intron 30.0%
AAAAGTTGCAAACTTTAACG+AGG - chr7_1:39212322-39212341 Msa1018730:intron 30.0%
TTAAGTCACCTATTGGAAAT+TGG + chr7_1:39212437-39212456 None:intergenic 30.0%
ATACCAATTTATTGATGCCA+TGG - chr7_1:39212475-39212494 Msa1018730:intron 30.0%
GAAACTATGAACAAGAGAAT+GGG + chr7_1:39212529-39212548 None:intergenic 30.0%
AGAAACTATGAACAAGAGAA+TGG + chr7_1:39212530-39212549 None:intergenic 30.0%
!! AATTTGAATGGTCTTGTAGA+AGG - chr7_1:39212673-39212692 Msa1018730:intron 30.0%
!!! CATTCATTAGTTTTTGTGGA+CGG - chr7_1:39212855-39212874 Msa1018730:intron 30.0%
CTTTACATAAAGATGGTTGA+TGG - chr7_1:39213008-39213027 Msa1018730:intron 30.0%
TTTAATCTACTAGTGTGTCT+CGG - chr7_1:39213067-39213086 Msa1018730:intron 30.0%
TTCTTTGTCTTTCTTAGAGT+AGG - chr7_1:39213125-39213144 Msa1018730:intron 30.0%
! ACTACATTTTCATAGTAGTG+TGG - chr7_1:39213211-39213230 Msa1018730:intron 30.0%
! CTACATTTTCATAGTAGTGT+GGG - chr7_1:39213212-39213231 Msa1018730:intron 30.0%
ATGTAATTAGAGTGACCATT+TGG + chr7_1:39213628-39213647 None:intergenic 30.0%
TCGTCAAACTATATTTCACA+TGG - chr7_1:39213760-39213779 Msa1018730:intron 30.0%
TCAACAATCACTTGTATAGA+TGG - chr7_1:39213850-39213869 Msa1018730:CDS 30.0%
TGTATAGATGGAACCTTAAA+AGG - chr7_1:39213862-39213881 Msa1018730:intron 30.0%
! AAAGGAGGTATAAACAAAGA+AGG - chr7_1:39213880-39213899 Msa1018730:intron 30.0%
TTCAATACCTGCACATTTAA+AGG + chr7_1:39214050-39214069 None:intergenic 30.0%
! ATATTTTGTTGAAGAGCTAG+TGG + chr7_1:39214103-39214122 None:intergenic 30.0%
GCTCTTCAACAAAATATTGA+CGG - chr7_1:39214106-39214125 Msa1018730:intron 30.0%
CCATGTAATTATACATAGCT+TGG + chr7_1:39214373-39214392 None:intergenic 30.0%
CCAAGCTATGTATAATTACA+TGG - chr7_1:39214370-39214389 Msa1018730:intron 30.0%
!! TAACTTTGAAACTGTAGCAT+GGG + chr7_1:39214483-39214502 None:intergenic 30.0%
!! ATAACTTTGAAACTGTAGCA+TGG + chr7_1:39214484-39214503 None:intergenic 30.0%
GTTATACAAGTCCAAATTTC+AGG - chr7_1:39214499-39214518 Msa1018730:intron 30.0%
AATATGTCTTGCCTGAAATT+TGG + chr7_1:39214513-39214532 None:intergenic 30.0%
AGACTAACAGATTTCAAATG+GGG - chr7_1:39214851-39214870 Msa1018730:intron 30.0%
CACAAAATATGAGTGGTTTA+TGG + chr7_1:39214900-39214919 None:intergenic 30.0%
AAATAATGAGAAAGCTAGTG+GGG - chr7_1:39215063-39215082 Msa1018730:intron 30.0%
!! TTCTCATTTGTTGTGAATTC+GGG + chr7_1:39215098-39215117 None:intergenic 30.0%
! AAAGGAAGTACAGACTTTAT+TGG - chr7_1:39215128-39215147 Msa1018730:intron 30.0%
! AAGGAAGTACAGACTTTATT+GGG - chr7_1:39215129-39215148 Msa1018730:intron 30.0%
!! GGATTAATCTTGGTTCTATT+TGG + chr7_1:39215191-39215210 None:intergenic 30.0%
! AAGGCATCAAAATTGTCAAT+AGG + chr7_1:39215212-39215231 None:intergenic 30.0%
!! TATTGACAATTTTGATGCCT+TGG - chr7_1:39215211-39215230 Msa1018730:intron 30.0%
! GTTTATGGTGTCAATTTCAA+TGG + chr7_1:39215324-39215343 None:intergenic 30.0%
!!! CATTATTGCAGTTTTGAATG+TGG - chr7_1:39215432-39215451 Msa1018730:intron 30.0%
AGACATAGTTACAACCATAT+TGG + chr7_1:39215610-39215629 None:intergenic 30.0%
AGACATTATATAATCCTTCG+GGG + chr7_1:39215634-39215653 None:intergenic 30.0%
! TTTTCAGTGATGTAGATTCT+TGG + chr7_1:39215686-39215705 None:intergenic 30.0%
AGAATCTACATCACTGAAAA+TGG - chr7_1:39215686-39215705 Msa1018730:intron 30.0%
! TTTGGTAGCATTTATATGTG+CGG + chr7_1:39215878-39215897 None:intergenic 30.0%
! AACTTACTTAATTGCTGCTT+TGG + chr7_1:39215896-39215915 None:intergenic 30.0%
! CTTTCCAAATTCTAAAGATG+TGG + chr7_1:39215926-39215945 None:intergenic 30.0%
! ATTTGAGTTTACGTACAACT+TGG + chr7_1:39216165-39216184 None:intergenic 30.0%
TTCTCCACCAAAGAATTTAT+GGG + chr7_1:39216214-39216233 None:intergenic 30.0%
ATTCTCCACCAAAGAATTTA+TGG + chr7_1:39216215-39216234 None:intergenic 30.0%
GGAGAATATTCATTGCTAAA+CGG - chr7_1:39216228-39216247 Msa1018730:intron 30.0%
!! GATACGTTTGATTTTGACAA+TGG - chr7_1:39216959-39216978 Msa1018730:intron 30.0%
TACTGAAAAACACAGCTAAA+TGG - chr7_1:39217038-39217057 Msa1018730:intron 30.0%
TCTAAATACCATACAGTTCA+TGG + chr7_1:39217439-39217458 None:intergenic 30.0%
CACTAGTAACATTGTGTAGT+TGG - chr7_1:39207118-39207137 Msa1018730:three_prime_UTR 35.0%
GTAACATTGTGTAGTTGGAT+TGG - chr7_1:39207123-39207142 Msa1018730:three_prime_UTR 35.0%
TTCTCCATCTAAGAAAACTC+TGG + chr7_1:39207242-39207261 None:intergenic 35.0%
! TGTTTTGCTTTCCAACATTC+GGG - chr7_1:39207319-39207338 Msa1018730:three_prime_UTR 35.0%
CGGCTAAACTACTTGATAAA+TGG + chr7_1:39207471-39207490 None:intergenic 35.0%
GTCTCTGCATATAACAATGT+AGG - chr7_1:39207543-39207562 Msa1018730:CDS 35.0%
ATCTTCATCATCTTAAGTGG+TGG - chr7_1:39207736-39207755 Msa1018730:intron 35.0%
TCTTCATCATCTTAAGTGGT+GGG - chr7_1:39207737-39207756 Msa1018730:intron 35.0%
!!! GGTTTTTTTTCATGAGCATC+TGG - chr7_1:39207878-39207897 Msa1018730:intron 35.0%
CATAATATATGCAAGGTCTC+AGG + chr7_1:39208003-39208022 None:intergenic 35.0%
TGAGTATAGCTCAATTCACA+TGG + chr7_1:39208250-39208269 None:intergenic 35.0%
TGTGAATTGAGCTATACTCA+CGG - chr7_1:39208250-39208269 Msa1018730:intron 35.0%
! AGACGGTTTAAAACAGGAAA+TGG + chr7_1:39208336-39208355 None:intergenic 35.0%
GTAATTATTGGCCATATCCA+TGG - chr7_1:39208609-39208628 Msa1018730:CDS 35.0%
TATGGCTAAAACCATGGATA+TGG + chr7_1:39208623-39208642 None:intergenic 35.0%
!!! ATATCCATGGTTTTAGCCAT+AGG - chr7_1:39208622-39208641 Msa1018730:CDS 35.0%
AAGACCAGCGTAATACAAAT+TGG - chr7_1:39208704-39208723 Msa1018730:intron 35.0%
TTCTCCAATTTGTATTACGC+TGG + chr7_1:39208711-39208730 None:intergenic 35.0%
AGCGTAATACAAATTGGAGA+AGG - chr7_1:39208710-39208729 Msa1018730:intron 35.0%
TGACTGTAGATTGAAGAAAG+TGG - chr7_1:39208926-39208945 Msa1018730:intron 35.0%
CCATACCTGTATATATAGAG+GGG - chr7_1:39208991-39209010 Msa1018730:intron 35.0%
TGTATCCCCTCTATATATAC+AGG + chr7_1:39208999-39209018 None:intergenic 35.0%
!! TTTTGGCTAAATTACACCGT+AGG - chr7_1:39209543-39209562 Msa1018730:intron 35.0%
! ATAATTAACAACTGGCCTAG+TGG - chr7_1:39209906-39209925 Msa1018730:intron 35.0%
TTCAAACAATTCATGCCACT+AGG + chr7_1:39209924-39209943 None:intergenic 35.0%
TTAATTGTAACAAGCAGTGG+CGG + chr7_1:39210181-39210200 None:intergenic 35.0%
TGTGAATGAGAAAAGAGTAG+TGG - chr7_1:39210330-39210349 Msa1018730:intron 35.0%
GGGAGAGAAAAAATGTGAAT+GGG + chr7_1:39210359-39210378 None:intergenic 35.0%
AGGGAGAGAAAAAATGTGAA+TGG + chr7_1:39210360-39210379 None:intergenic 35.0%
AGGAGATAGGAGAAATCAAA+GGG + chr7_1:39210379-39210398 None:intergenic 35.0%
AAGGAGATAGGAGAAATCAA+AGG + chr7_1:39210380-39210399 None:intergenic 35.0%
!!! TCTCCTTTTTTTTGTCACAG+AGG - chr7_1:39210393-39210412 Msa1018730:CDS 35.0%
!!! CTCCTTTTTTTTGTCACAGA+GGG - chr7_1:39210394-39210413 Msa1018730:CDS 35.0%
! CCCTTAATCTTCATTTTGGA+TGG + chr7_1:39210434-39210453 None:intergenic 35.0%
! CATCCCCTTAATCTTCATTT+TGG + chr7_1:39210438-39210457 None:intergenic 35.0%
CAAAATGAAGATTAAGGGGA+TGG - chr7_1:39210436-39210455 Msa1018730:intron 35.0%
AAATGAAGATTAAGGGGATG+GGG - chr7_1:39210438-39210457 Msa1018730:intron 35.0%
!! TAACAAGCAGAAGCTTTTTC+CGG - chr7_1:39210618-39210637 Msa1018730:intron 35.0%
! TGAGCATTGCAAGAGATATA+AGG - chr7_1:39210665-39210684 Msa1018730:intron 35.0%
GACGATTAGAATCGAGATTA+AGG + chr7_1:39210878-39210897 None:intergenic 35.0%
!! TACAAGAAGTACTTAAGTCC+AGG - chr7_1:39211002-39211021 Msa1018730:intron 35.0%
! TCTTCTTTGTTACTTAGACC+TGG + chr7_1:39211023-39211042 None:intergenic 35.0%
!! TTTTAGACCAGAGATTTGGT+GGG + chr7_1:39211109-39211128 None:intergenic 35.0%
! ATTTTAGACCAGAGATTTGG+TGG + chr7_1:39211110-39211129 None:intergenic 35.0%
GATTTATAGCCATCCACAAT+GGG + chr7_1:39211143-39211162 None:intergenic 35.0%
AGATTTATAGCCATCCACAA+TGG + chr7_1:39211144-39211163 None:intergenic 35.0%
AGAAGAAGAATTGTTCCTCT+TGG - chr7_1:39211483-39211502 Msa1018730:intron 35.0%
AAGAATTGTTCCTCTTGGAA+CGG - chr7_1:39211488-39211507 Msa1018730:intron 35.0%
! GAACGGAAGCATATATCTAT+TGG - chr7_1:39211505-39211524 Msa1018730:intron 35.0%
AGCATATATCTATTGGTGGA+AGG - chr7_1:39211512-39211531 Msa1018730:intron 35.0%
AGTCTTTACTATGTTCCCAA+AGG + chr7_1:39211645-39211664 None:intergenic 35.0%
AAGACTGTAAGAAAGTAACC+TGG - chr7_1:39211659-39211678 Msa1018730:intron 35.0%
AGGACTCAGCTTGAAAAATT+TGG - chr7_1:39211720-39211739 Msa1018730:intron 35.0%
TCCATATTTAAAGGGGAGTA+GGG + chr7_1:39211818-39211837 None:intergenic 35.0%
TTCCATATTTAAAGGGGAGT+AGG + chr7_1:39211819-39211838 None:intergenic 35.0%
!! TGATTCTAGGATAATGGGTA+CGG + chr7_1:39212004-39212023 None:intergenic 35.0%
ACCATGAATACATTATCGGA+TGG - chr7_1:39212145-39212164 Msa1018730:intron 35.0%
CCATGAATACATTATCGGAT+GGG - chr7_1:39212146-39212165 Msa1018730:intron 35.0%
CATGAATACATTATCGGATG+GGG - chr7_1:39212147-39212166 Msa1018730:intron 35.0%
AATCATTTCATGGGATACGA+AGG - chr7_1:39212200-39212219 Msa1018730:intron 35.0%
GAAAACATTGGCAAAAGCTT+CGG - chr7_1:39212234-39212253 Msa1018730:intron 35.0%
AAAGGTGAAACCCTTATCAT+GGG - chr7_1:39212352-39212371 Msa1018730:intron 35.0%
TGGCATATCCAATTTCCAAT+AGG - chr7_1:39212426-39212445 Msa1018730:intron 35.0%
CTACCATGGCATCAATAAAT+TGG + chr7_1:39212481-39212500 None:intergenic 35.0%
TGTTACCAAAAACACTACCA+TGG + chr7_1:39212495-39212514 None:intergenic 35.0%
!! TTCTTTTGTTGTAATGGAGC+TGG - chr7_1:39212546-39212565 Msa1018730:intron 35.0%
CTTACAGATTCTCCATATGT+TGG - chr7_1:39212729-39212748 Msa1018730:intron 35.0%
TATTACTCTGCTCCAACATA+TGG + chr7_1:39212744-39212763 None:intergenic 35.0%
GTTAGTTCAAAAGTTCTACC+TGG + chr7_1:39212767-39212786 None:intergenic 35.0%
AGAGCTAGACCTAAATAGAA+AGG + chr7_1:39213268-39213287 None:intergenic 35.0%
CAAACAAAATGCTAACGGAA+AGG - chr7_1:39213421-39213440 Msa1018730:intron 35.0%
ATAGATGGAACCTTAAAAGG+AGG - chr7_1:39213865-39213884 Msa1018730:intron 35.0%
ATCAACGAGTTACTCAACAA+TGG - chr7_1:39213925-39213944 Msa1018730:intron 35.0%
ACATGATCCTTTAAATGTGC+AGG - chr7_1:39214040-39214059 Msa1018730:intron 35.0%
GATCACCATATGTTTCGAAT+AGG + chr7_1:39214313-39214332 None:intergenic 35.0%
ATGGTGATCGAGTGAAATAT+TGG - chr7_1:39214324-39214343 Msa1018730:intron 35.0%
TTATACATAGCTTGGAGTTC+CGG + chr7_1:39214365-39214384 None:intergenic 35.0%
TTGACATTCACAACAACATG+AGG - chr7_1:39214589-39214608 Msa1018730:intron 35.0%
TGACATTCACAACAACATGA+GGG - chr7_1:39214590-39214609 Msa1018730:intron 35.0%
TAACAGATTTCAAATGGGGA+TGG - chr7_1:39214855-39214874 Msa1018730:intron 35.0%
!!! GTTTTAGAGCCTTTGTTCAA+CGG - chr7_1:39215029-39215048 Msa1018730:intron 35.0%
!!! TTTTAGAGCCTTTGTTCAAC+GGG - chr7_1:39215030-39215049 Msa1018730:intron 35.0%
!!! ATTGCAGTTTTGAATGTGGA+AGG - chr7_1:39215436-39215455 Msa1018730:intron 35.0%
AATGTGGAAGGAAAAACTCT+TGG - chr7_1:39215448-39215467 Msa1018730:intron 35.0%
TCTACATCACTGAAAATGGT+TGG - chr7_1:39215690-39215709 Msa1018730:intron 35.0%
!! GGATTTGGGATTTTGAAAGA+AGG + chr7_1:39215823-39215842 None:intergenic 35.0%
! GTTCGTCATTCAATGGATTT+GGG + chr7_1:39215837-39215856 None:intergenic 35.0%
! TGTTCGTCATTCAATGGATT+TGG + chr7_1:39215838-39215857 None:intergenic 35.0%
!! TTCGACTGCATTTTAACCAT+CGG - chr7_1:39216130-39216149 Msa1018730:intron 35.0%
AACTTGGACATATTTACCGA+TGG + chr7_1:39216149-39216168 None:intergenic 35.0%
TGTACGTAAACTCAAATCAG+AGG - chr7_1:39216168-39216187 Msa1018730:intron 35.0%
GTACGTAAACTCAAATCAGA+GGG - chr7_1:39216169-39216188 Msa1018730:intron 35.0%
TACGTAAACTCAAATCAGAG+GGG - chr7_1:39216170-39216189 Msa1018730:intron 35.0%
AATTTATGGGACACACAAGA+TGG + chr7_1:39216201-39216220 None:intergenic 35.0%
TGTGTGTCCCATAAATTCTT+TGG - chr7_1:39216204-39216223 Msa1018730:intron 35.0%
GAATATTCATTGCTAAACGG+CGG - chr7_1:39216231-39216250 Msa1018730:intron 35.0%
TTTCTGTTTGGACTTCTAAG+AGG - chr7_1:39217243-39217262 Msa1018730:exon 35.0%
AAGTTGTTCCATGAACTGTA+TGG - chr7_1:39217428-39217447 Msa1018730:five_prime_UTR 35.0%
TGTCATTGTCAAAGTAGTGC+GGG + chr7_1:39207100-39207119 None:intergenic 40.0%
! GTGTCATTGTCAAAGTAGTG+CGG + chr7_1:39207101-39207120 None:intergenic 40.0%
GTGAATGGGAGAGAAGATAA+TGG - chr7_1:39207784-39207803 Msa1018730:intron 40.0%
! TGACGAAGACGGTTTAAAAC+AGG + chr7_1:39208342-39208361 None:intergenic 40.0%
GTAGATAACTCACGTTGAGA+TGG + chr7_1:39208582-39208601 None:intergenic 40.0%
ACGTGAGTTATCTACTTCAC+AGG - chr7_1:39208587-39208606 Msa1018730:intron 40.0%
ATTCATCAAGCTTTCCGAAC+CGG - chr7_1:39208774-39208793 Msa1018730:intron 40.0%
!!! TTCCCACGTAGCTTCTTTTT+TGG - chr7_1:39208803-39208822 Msa1018730:CDS 40.0%
CACCAAAAAAGAAGCTACGT+GGG + chr7_1:39208808-39208827 None:intergenic 40.0%
ACACCAAAAAAGAAGCTACG+TGG + chr7_1:39208809-39208828 None:intergenic 40.0%
!!! CGTAGCTTCTTTTTTGGTGT+TGG - chr7_1:39208809-39208828 Msa1018730:CDS 40.0%
!! CTTTTTAGCATGTACCTGAC+CGG + chr7_1:39208843-39208862 None:intergenic 40.0%
GCTAAAAAGTCACAGACCTA+TGG - chr7_1:39208854-39208873 Msa1018730:CDS 40.0%
GAAGAAAGTGGATATCATGG+AGG - chr7_1:39208938-39208957 Msa1018730:intron 40.0%
! AGAGGGCTTGGTATATTTGA+CGG - chr7_1:39208962-39208981 Msa1018730:intron 40.0%
CCCCTCTATATATACAGGTA+TGG + chr7_1:39208994-39209013 None:intergenic 40.0%
TTGAAAGTAGCAGGAGAATG+TGG - chr7_1:39209939-39209958 Msa1018730:intron 40.0%
TGAAAGTAGCAGGAGAATGT+GGG - chr7_1:39209940-39209959 Msa1018730:intron 40.0%
CACCCTCTGTGACAAAAAAA+AGG + chr7_1:39210399-39210418 None:intergenic 40.0%
!!! TTTTTTTGTCACAGAGGGTG+AGG - chr7_1:39210399-39210418 Msa1018730:CDS 40.0%
TAGAGATCTTTGTGCTCAGT+TGG + chr7_1:39211076-39211095 None:intergenic 40.0%
ACCAAATTACCCATTGTGGA+TGG - chr7_1:39211131-39211150 Msa1018730:intron 40.0%
!! AGAGGGAATTTTGGTGTGTT+TGG - chr7_1:39211196-39211215 Msa1018730:intron 40.0%
!! GGAATTTTGGTGTGTTTGGA+TGG - chr7_1:39211200-39211219 Msa1018730:intron 40.0%
!! ATTTTGGTGTGTTTGGATGG+TGG - chr7_1:39211203-39211222 Msa1018730:intron 40.0%
! TGTTTGGATGGTGGTTTAAG+AGG - chr7_1:39211212-39211231 Msa1018730:intron 40.0%
! GTTTGGATGGTGGTTTAAGA+GGG - chr7_1:39211213-39211232 Msa1018730:intron 40.0%
! TTTGGATGGTGGTTTAAGAG+GGG - chr7_1:39211214-39211233 Msa1018730:intron 40.0%
CAACATCTACAAGGTGTGTT+TGG + chr7_1:39211434-39211453 None:intergenic 40.0%
CACCTTGTAGATGTTGTACT+TGG - chr7_1:39211438-39211457 Msa1018730:intron 40.0%
TGCCAAGTACAACATCTACA+AGG + chr7_1:39211443-39211462 None:intergenic 40.0%
ATATATGCTTCCGTTCCAAG+AGG + chr7_1:39211501-39211520 None:intergenic 40.0%
! CGGAAGCATATATCTATTGG+TGG - chr7_1:39211508-39211527 Msa1018730:intron 40.0%
!! AGAAAGTAACCTGGATTAGC+TGG - chr7_1:39211668-39211687 Msa1018730:intron 40.0%
! CACATTTTTCCAGCTAATCC+AGG + chr7_1:39211680-39211699 None:intergenic 40.0%
CATATTTAAAGGGGAGTAGG+GGG + chr7_1:39211816-39211835 None:intergenic 40.0%
CCATATTTAAAGGGGAGTAG+GGG + chr7_1:39211817-39211836 None:intergenic 40.0%
CCCATCCGATAATGTATTCA+TGG + chr7_1:39212149-39212168 None:intergenic 40.0%
AATGTTGTAATGGTGTACCC+CGG + chr7_1:39212177-39212196 None:intergenic 40.0%
AAAAGCTTCGGCACATTATG+TGG - chr7_1:39212246-39212265 Msa1018730:intron 40.0%
TTTGGTCGTTATGGACAATG+AGG - chr7_1:39212279-39212298 Msa1018730:intron 40.0%
CTTTAACGAGGCGATTTCAA+AGG - chr7_1:39212334-39212353 Msa1018730:intron 40.0%
CAAAGGTGAAACCCTTATCA+TGG - chr7_1:39212351-39212370 Msa1018730:intron 40.0%
AAGGTGAAACCCTTATCATG+GGG - chr7_1:39212353-39212372 Msa1018730:intron 40.0%
ATGAACAAGCCCCATGATAA+GGG + chr7_1:39212365-39212384 None:intergenic 40.0%
AATGAACAAGCCCCATGATA+AGG + chr7_1:39212366-39212385 None:intergenic 40.0%
TTAGTTGATCCCTTTCAGAC+TGG - chr7_1:39212402-39212421 Msa1018730:intron 40.0%
ATATGCCAACCAGTCTGAAA+GGG + chr7_1:39212414-39212433 None:intergenic 40.0%
!! TGATGCCATGGTAGTGTTTT+TGG - chr7_1:39212487-39212506 Msa1018730:intron 40.0%
GTGCAACGATTGAAGAAACT+TGG - chr7_1:39212698-39212717 Msa1018730:intron 40.0%
AAGTGCAGGATAGTCACAAA+AGG + chr7_1:39214073-39214092 None:intergenic 40.0%
GAGCTCCTATTCGAAACATA+TGG - chr7_1:39214305-39214324 Msa1018730:intron 40.0%
TTGGACTACATTCAATGAGC+CGG - chr7_1:39214343-39214362 Msa1018730:intron 40.0%
TCTAGGTTCTTATTCTACGG+AGG - chr7_1:39214397-39214416 Msa1018730:intron 40.0%
TTTGACATAGGCAGTTCAAG+AGG - chr7_1:39214751-39214770 Msa1018730:intron 40.0%
TTGACATAGGCAGTTCAAGA+GGG - chr7_1:39214752-39214771 Msa1018730:intron 40.0%
!! AAAGGCTCTAAAACCCTGAA+AGG + chr7_1:39215023-39215042 None:intergenic 40.0%
! TTTAGAGCCTTTGTTCAACG+GGG - chr7_1:39215031-39215050 Msa1018730:intron 40.0%
TTTACCTTCTGTAACAGCCA+AGG + chr7_1:39215231-39215250 None:intergenic 40.0%
TTGTGACATCCTCTCTTTGT+AGG - chr7_1:39215793-39215812 Msa1018730:intron 40.0%
GAAGGAATTCCTACAAAGAG+AGG + chr7_1:39215805-39215824 None:intergenic 40.0%
GTTCGATGTTCGTCATTCAA+TGG + chr7_1:39215844-39215863 None:intergenic 40.0%
GTGTCCCATAAATTCTTTGG+TGG - chr7_1:39216207-39216226 Msa1018730:intron 40.0%
! ACGTTCGTGGATATTTTGCA+TGG - chr7_1:39216927-39216946 Msa1018730:intron 40.0%
! CGTTCGTGGATATTTTGCAT+GGG - chr7_1:39216928-39216947 Msa1018730:intron 40.0%
!! TGTTGATTGGTCTCTCAACT+TGG - chr7_1:39217106-39217125 Msa1018730:intron 40.0%
TCAACTTGGAGAAATGGCAA+GGG - chr7_1:39217120-39217139 Msa1018730:intron 40.0%
AAATGCTCAAACCTTGTGCC+TGG + chr7_1:39207346-39207365 None:intergenic 45.0%
!! TGGAAGCATCAGGATGTGAA+TGG - chr7_1:39207769-39207788 Msa1018730:intron 45.0%
!! GGAAGCATCAGGATGTGAAT+GGG - chr7_1:39207770-39207789 Msa1018730:intron 45.0%
TGAGCTTAGCTAAGCTGGTA+AGG + chr7_1:39208032-39208051 None:intergenic 45.0%
TACCAGCTTAGCTAAGCTCA+CGG - chr7_1:39208032-39208051 Msa1018730:intron 45.0%
TGTGCCTATGGCTAAAACCA+TGG + chr7_1:39208629-39208648 None:intergenic 45.0%
AAAGAAGCTACGTGGGAATG+AGG + chr7_1:39208801-39208820 None:intergenic 45.0%
!! TTTGGTGTTGGAAGTTCAGC+CGG - chr7_1:39208821-39208840 Msa1018730:CDS 45.0%
AGTGGATATCATGGAGGAAG+AGG - chr7_1:39208944-39208963 Msa1018730:intron 45.0%
GTGGATATCATGGAGGAAGA+GGG - chr7_1:39208945-39208964 Msa1018730:intron 45.0%
!! AAGGACTAACTTGTTCCCAG+TGG - chr7_1:39209810-39209829 Msa1018730:intron 45.0%
TTAAGTCAAGATCCGCCACT+GGG + chr7_1:39209828-39209847 None:intergenic 45.0%
TTTAAGTCAAGATCCGCCAC+TGG + chr7_1:39209829-39209848 None:intergenic 45.0%
CACAATGTTGTAAAGGTCGC+AGG + chr7_1:39210048-39210067 None:intergenic 45.0%
CTGCGACCTTTACAACATTG+TGG - chr7_1:39210046-39210065 Msa1018730:intron 45.0%
ACAAATTCTATCCGCTGCAG+TGG + chr7_1:39210082-39210101 None:intergenic 45.0%
CTGCAGCGGATAGAATTTGT+TGG - chr7_1:39210082-39210101 Msa1018730:CDS 45.0%
TTGTGCTCAGTTGGTTGTCT+GGG + chr7_1:39211067-39211086 None:intergenic 45.0%
TTTGTGCTCAGTTGGTTGTC+TGG + chr7_1:39211068-39211087 None:intergenic 45.0%
GCCATCCACAATGGGTAATT+TGG + chr7_1:39211135-39211154 None:intergenic 45.0%
CCCCTACTCCCCTTTAAATA+TGG - chr7_1:39211814-39211833 Msa1018730:intron 45.0%
!! TAGGATAATGGGTACGGTAG+TGG + chr7_1:39211998-39212017 None:intergenic 45.0%
TTGATCCCTTTCAGACTGGT+TGG - chr7_1:39212406-39212425 Msa1018730:intron 45.0%
GATATGCCAACCAGTCTGAA+AGG + chr7_1:39212415-39212434 None:intergenic 45.0%
TGTTGGAGCAGAGTAATACC+AGG - chr7_1:39212746-39212765 Msa1018730:intron 45.0%
!! TAGGTCTAGCTCTATAGCAC+AGG - chr7_1:39213275-39213294 Msa1018730:intron 45.0%
!! AGGTCTAGCTCTATAGCACA+GGG - chr7_1:39213276-39213295 Msa1018730:intron 45.0%
! CTAGTGGATAGTCAAAGTGC+AGG + chr7_1:39214087-39214106 None:intergenic 45.0%
GCAGTTCAAGAGGGAGAAAT+TGG - chr7_1:39214761-39214780 Msa1018730:intron 45.0%
TCCTGAGGCTTGGAACTATA+GGG + chr7_1:39214815-39214834 None:intergenic 45.0%
ATCCTGAGGCTTGGAACTAT+AGG + chr7_1:39214816-39214835 None:intergenic 45.0%
! GCGTTTGATTTCGCCTTTCA+GGG - chr7_1:39215007-39215026 Msa1018730:intron 45.0%
GGATAATCCCCGTTGAACAA+AGG + chr7_1:39215041-39215060 None:intergenic 45.0%
TGTAACTATGTCTACCCCGA+AGG - chr7_1:39215617-39215636 Msa1018730:intron 45.0%
TATTCATTGCTAAACGGCGG+TGG - chr7_1:39216234-39216253 Msa1018730:intron 45.0%
GGTCTCTCAACTTGGAGAAA+TGG - chr7_1:39217114-39217133 Msa1018730:intron 45.0%
CTCAACTTGGAGAAATGGCA+AGG - chr7_1:39217119-39217138 Msa1018730:intron 45.0%
!!! ATAATATTATAAGTTTTTTT+AGG - chr7_1:39210773-39210792 Msa1018730:intron 5.0%
!!! TAATATTATAAGTTTTTTTA+GGG - chr7_1:39210774-39210793 Msa1018730:intron 5.0%
!!! AATTATAATATATTTTTATG+AGG + chr7_1:39210820-39210839 None:intergenic 5.0%
!!! AACTTAATTATATTTTTTTT+AGG - chr7_1:39215529-39215548 Msa1018730:intron 5.0%
AAGGTCTCAGGTTCGAACTC+CGG + chr7_1:39207991-39208010 None:intergenic 50.0%
ACCAGCTTAGCTAAGCTCAC+GGG - chr7_1:39208033-39208052 Msa1018730:intron 50.0%
CGTTGAGATGGTTTCTGCGA+GGG + chr7_1:39208570-39208589 None:intergenic 50.0%
ACGTTGAGATGGTTTCTGCG+AGG + chr7_1:39208571-39208590 None:intergenic 50.0%
TATCATGGAGGAAGAGGGCT+TGG - chr7_1:39208950-39208969 Msa1018730:intron 50.0%
!! GACTAACTTGTTCCCAGTGG+CGG - chr7_1:39209813-39209832 Msa1018730:intron 50.0%
! GGGGTGCCACAATGTTGTAA+AGG + chr7_1:39210055-39210074 None:intergenic 50.0%
TGTGCTCAGTTGGTTGTCTG+GGG + chr7_1:39211066-39211085 None:intergenic 50.0%
!! AGACCAGAGATTTGGTGGGA+GGG + chr7_1:39211105-39211124 None:intergenic 50.0%
!! TAGACCAGAGATTTGGTGGG+AGG + chr7_1:39211106-39211125 None:intergenic 50.0%
TGGTTTAAGAGGGGAAGCGA+GGG - chr7_1:39211223-39211242 Msa1018730:intron 50.0%
CATTATCGGATGGGGATGAC+CGG - chr7_1:39212155-39212174 Msa1018730:intron 50.0%
ATTATCGGATGGGGATGACC+GGG - chr7_1:39212156-39212175 Msa1018730:intron 50.0%
TCCCTATAGTTCCAAGCCTC+AGG - chr7_1:39214811-39214830 Msa1018730:intron 50.0%
TAGTTCCAAGCCTCAGGATG+TGG - chr7_1:39214817-39214836 Msa1018730:intron 50.0%
! GGCGTTTGATTTCGCCTTTC+AGG - chr7_1:39215006-39215025 Msa1018730:intron 50.0%
GATGCCTTGGCTGTTACAGA+AGG - chr7_1:39215224-39215243 Msa1018730:intron 50.0%
GCTTTCCAACATTCGGGTCC+AGG - chr7_1:39207325-39207344 Msa1018730:three_prime_UTR 55.0%
TTGTGCCTGGACCCGAATGT+TGG + chr7_1:39207333-39207352 None:intergenic 55.0%
AACATTCGGGTCCAGGCACA+AGG - chr7_1:39207332-39207351 Msa1018730:three_prime_UTR 55.0%
!! TAAGTGGTGGGTGAGCGAGT+TGG - chr7_1:39207749-39207768 Msa1018730:intron 55.0%
!! GTGAGCGAGTTGGAAGCATC+AGG - chr7_1:39207759-39207778 Msa1018730:intron 55.0%
TCCCGTGAGCTTAGCTAAGC+TGG + chr7_1:39208037-39208056 None:intergenic 55.0%
AGCTACGTGGGAATGAGGTC+CGG + chr7_1:39208796-39208815 None:intergenic 55.0%
TGTTGGAAGTTCAGCCGGTC+AGG - chr7_1:39208826-39208845 Msa1018730:CDS 55.0%
TCGCAGGTTCGACACTTGCA+TGG + chr7_1:39210032-39210051 None:intergenic 55.0%
TATCCGCTGCAGTGGTTGAG+GGG + chr7_1:39210074-39210093 None:intergenic 55.0%
CTATCCGCTGCAGTGGTTGA+GGG + chr7_1:39210075-39210094 None:intergenic 55.0%
TCTATCCGCTGCAGTGGTTG+AGG + chr7_1:39210076-39210095 None:intergenic 55.0%
GCAAAATCTAGGGGATGCCG+TGG - chr7_1:39210132-39210151 Msa1018730:CDS 55.0%
TGTCACAGAGGGTGAGGATG+TGG - chr7_1:39210405-39210424 Msa1018730:CDS 55.0%
GTCACAGAGGGTGAGGATGT+GGG - chr7_1:39210406-39210425 Msa1018730:CDS 55.0%
GTGCTCAGTTGGTTGTCTGG+GGG + chr7_1:39211065-39211084 None:intergenic 55.0%
GTGGTTTAAGAGGGGAAGCG+AGG - chr7_1:39211222-39211241 Msa1018730:intron 55.0%
GGTTTAAGAGGGGAAGCGAG+GGG - chr7_1:39211224-39211243 Msa1018730:intron 55.0%
TTATCGGATGGGGATGACCG+GGG - chr7_1:39212157-39212176 Msa1018730:intron 55.0%
AGCATCCACATCCTGAGGCT+TGG + chr7_1:39214825-39214844 None:intergenic 55.0%
TGAGCAGCATCCACATCCTG+AGG + chr7_1:39214830-39214849 None:intergenic 55.0%
AGTGACGGCGTAAACGTTCG+TGG - chr7_1:39216914-39216933 Msa1018730:intron 55.0%
CGTGGGAATGAGGTCCGGTT+CGG + chr7_1:39208791-39208810 None:intergenic 60.0%
! TGGCGGATCTCTTCAGTGGC+CGG + chr7_1:39210164-39210183 None:intergenic 60.0%
!! GCAGTGGCGGATCTCTTCAG+TGG + chr7_1:39210168-39210187 None:intergenic 60.0%
CGTCCCTCCCACCAAATCTC+TGG - chr7_1:39211099-39211118 Msa1018730:intron 60.0%
TTAAGAGGGGAAGCGAGGGG+AGG - chr7_1:39211227-39211246 Msa1018730:intron 60.0%
GCACCCCTCAACCACTGCAG+CGG - chr7_1:39210068-39210087 Msa1018730:CDS 65.0%
ATCTCTTCAGTGGCCGGCGG+GGG + chr7_1:39210158-39210177 None:intergenic 65.0%
GATCTCTTCAGTGGCCGGCG+GGG + chr7_1:39210159-39210178 None:intergenic 65.0%
GGATCTCTTCAGTGGCCGGC+GGG + chr7_1:39210160-39210179 None:intergenic 65.0%
CGGATCTCTTCAGTGGCCGG+CGG + chr7_1:39210161-39210180 None:intergenic 65.0%
! TCAGTGGCCGGCGGGGGCCA+CGG + chr7_1:39210152-39210171 None:intergenic 80.0%
! GGGGATGCCGTGGCCCCCGC+CGG - chr7_1:39210142-39210161 Msa1018730:CDS 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 39206973 39217525 39206973 ID=Msa1018730;Name=Msa1018730
chr7_1 mRNA 39206973 39217525 39206973 ID=Msa1018730-mRNA-1;Parent=Msa1018730;Name=Msa1018730-mRNA-1;_AED=0.21;_eAED=0.21;_QI=281|0.81|0.91|1|0.81|0.91|12|429|433
chr7_1 exon 39206973 39207582 39206973 ID=Msa1018730-mRNA-1:exon:7638;Parent=Msa1018730-mRNA-1
chr7_1 exon 39208590 39208683 39208590 ID=Msa1018730-mRNA-1:exon:7637;Parent=Msa1018730-mRNA-1
chr7_1 exon 39208791 39208893 39208791 ID=Msa1018730-mRNA-1:exon:7636;Parent=Msa1018730-mRNA-1
chr7_1 exon 39209021 39209055 39209021 ID=Msa1018730-mRNA-1:exon:7635;Parent=Msa1018730-mRNA-1
chr7_1 exon 39209253 39209470 39209253 ID=Msa1018730-mRNA-1:exon:7634;Parent=Msa1018730-mRNA-1
chr7_1 exon 39209622 39209737 39209622 ID=Msa1018730-mRNA-1:exon:7633;Parent=Msa1018730-mRNA-1
chr7_1 exon 39210062 39210215 39210062 ID=Msa1018730-mRNA-1:exon:7632;Parent=Msa1018730-mRNA-1
chr7_1 exon 39210349 39210436 39210349 ID=Msa1018730-mRNA-1:exon:7631;Parent=Msa1018730-mRNA-1
chr7_1 exon 39210552 39210629 39210552 ID=Msa1018730-mRNA-1:exon:7630;Parent=Msa1018730-mRNA-1
chr7_1 exon 39211731 39211806 39211731 ID=Msa1018730-mRNA-1:exon:7629;Parent=Msa1018730-mRNA-1
chr7_1 exon 39213812 39213870 39213812 ID=Msa1018730-mRNA-1:exon:7628;Parent=Msa1018730-mRNA-1
chr7_1 exon 39217145 39217525 39217145 ID=Msa1018730-mRNA-1:exon:7627;Parent=Msa1018730-mRNA-1
chr7_1 five_prime_UTR 39217245 39217525 39217245 ID=Msa1018730-mRNA-1:five_prime_utr;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39217145 39217244 39217145 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39213812 39213870 39213812 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39211731 39211806 39211731 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39210552 39210629 39210552 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39210349 39210436 39210349 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39210062 39210215 39210062 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39209622 39209737 39209622 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39209253 39209470 39209253 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39209021 39209055 39209021 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39208791 39208893 39208791 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39208590 39208683 39208590 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 CDS 39207402 39207582 39207402 ID=Msa1018730-mRNA-1:cds;Parent=Msa1018730-mRNA-1
chr7_1 three_prime_UTR 39206973 39207401 39206973 ID=Msa1018730-mRNA-1:three_prime_utr;Parent=Msa1018730-mRNA-1
Gene Sequence

>Msa1018730

ATGGAGAAAATGGAGATTCTATCATCTTTGAGAATTGCTAAAACTATTCTTGCAATCTTGTCGCTTGTTTTGCTTTCCAACATTCGGGTCCAGGCACAAGAAGCTTTTTCCGGAGATAATAAATTTGTTACAAAGATTGAGCATTGCAAGAGATATAAGAAGGACGTGCAACGATTGAAGAAACTTGGAGTGAATTCTTACAGATTCTCCATATGTTGGAGCAGAGTAATACCAGATGGAACCTTAAAAGGAGGTATAAACAAAGAAGGTATCGACTTCTACAACAATTTGATCAACGAGTTACTCAACAATGGTATTGAACCTTTTGTGACTATCCTGCACTTTGACTATCCACTAGCTCTTCAACAAAATATTGACGGCTTCTTAAATCGCTCCATTGTGAAACATTTCAAGGATTATAGTGAGCTCCTATTCGAAACATATGGTGATCGAGTGAAATATTGGACTACATTCAATGAGCCGGAACTCCAAGCTATGTATAATTACATGGGAAATCTAGGTTCTTATTCTACGGAGGACTGTGCAACTACTAAAGCAGTTCAAGAGGGAGAAATTGGAATTGCTATTTCTTCAAAATCATATGTTCCCTATAGTTCCAAGCCTCAGGATGTGGATGCTGCTCAAAGACTAACAGATTTCAAATGGGGATGGGTTTTAGAGCCTTTGTTCAACGGGGATTATCCAAAAATAATGAGAAAGCTAGTGGGGAAAAGACTACCCGAATTCACAACAAATGAGAAAGAAATGTTGAAAGGAAGTACAGACTTTATTGGGATCAATTATTATTACTCTCTCTTTGTTAGACATGAACCAAATAGAACCAAGATTAATCCTATTGACAATTTTGATGCCTTGGCTGTTACAGAAGTTTTGAATGTGGAAGGAAAAACTCTTGGTTACTATGACCAATATGGTTGTAACTATGTCTACCCCGAAGGATTATATAATGTCTTGCTCTACATTAACAAAGAGTATAAAAATCCAAGAATCTACATCACTGAAAATGGAATTCCTTCTTTCAAAATCCCAAATCCATTGAATGACGAACATCGAACTGCTTACATCGCCGCACATATAAATGCTACCAAAGCAGCAATTAATGACGGCGTAAACGTTCGTGGATATTTTGCATGGGCAGCATTTGATACGTTTGATTTTGACAATGGATATTCTAAACATATGGGGCTTTATCATGTCGATTTTGATGATAGTCTCAAACGTATACTGAAAAACACAGCTAAATGGTACAAAAAGTATTTGACACTTGATTCGGTACACTAA
Protein sequence

>Msa1018730

MEKMEILSSLRIAKTILAILSLVLLSNIRVQAQEAFSGDNKFVTKIEHCKRYKKDVQRLKKLGVNSYRFSICWSRVIPDGTLKGGINKEGIDFYNNLINELLNNGIEPFVTILHFDYPLALQQNIDGFLNRSIVKHFKDYSELLFETYGDRVKYWTTFNEPELQAMYNYMGNLGSYSTEDCATTKAVQEGEIGIAISSKSYVPYSSKPQDVDAAQRLTDFKWGWVLEPLFNGDYPKIMRKLVGKRLPEFTTNEKEMLKGSTDFIGINYYYSLFVRHEPNRTKINPIDNFDALAVTEVLNVEGKTLGYYDQYGCNYVYPEGLYNVLLYINKEYKNPRIYITENGIPSFKIPNPLNDEHRTAYIAAHINATKAAINDGVNVRGYFAWAAFDTFDFDNGYSKHMGLYHVDFDDSLKRILKNTAKWYKKYLTLDSVH*