AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1344870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344870 MtrunA17_Chr8g0347281 96.242 479 18 0 1 479 1 479 0.0 956
Msa1344870 MtrunA17_Chr8g0347271 92.662 477 35 0 3 479 4 480 0.0 926
Msa1344870 MtrunA17_Chr7g0275511 60.042 478 175 5 4 472 5 475 0.0 579
Msa1344870 MtrunA17_Chr6g0449931 49.247 465 227 5 19 475 7 470 4.90e-150 436
Msa1344870 MtrunA17_Chr8g0336651 48.283 466 233 5 19 476 782 1247 4.97e-150 459
Msa1344870 MtrunA17_Chr8g0336651 46.638 461 236 5 19 472 7 464 1.35e-138 429
Msa1344870 MtrunA17_Chr8g0336651 46.316 285 111 4 198 475 528 777 1.05e-72 249
Msa1344870 MtrunA17_Chr7g0232411 45.572 463 241 6 19 473 7 466 6.91e-150 436
Msa1344870 MtrunA17_Chr7g0232391 45.788 463 240 6 19 473 7 466 1.35e-148 432
Msa1344870 MtrunA17_Chr1g0153451 46.908 469 236 7 19 479 7 470 2.42e-148 432
Msa1344870 MtrunA17_Chr8g0336691 47.537 467 233 4 19 476 920 1383 1.55e-146 453
Msa1344870 MtrunA17_Chr8g0336691 46.983 464 238 4 19 475 14 476 2.98e-142 441
Msa1344870 MtrunA17_Chr8g0336691 45.923 466 212 6 19 475 481 915 4.00e-135 422
Msa1344870 MtrunA17_Chr6g0459311 47.097 465 236 9 19 476 14 475 2.17e-144 422
Msa1344870 MtrunA17_Chr6g0486251 47.084 463 233 9 19 473 7 465 1.04e-143 420
Msa1344870 MtrunA17_Chr6g0486201 47.084 463 233 9 19 473 7 465 1.04e-143 420
Msa1344870 MtrunA17_Chr7g0232401 46.187 459 238 5 19 469 7 464 1.34e-142 417
Msa1344870 MtrunA17_Chr8g0336741 43.319 464 255 4 19 476 14 475 4.87e-142 416
Msa1344870 MtrunA17_Chr8g0336731 44.301 465 249 6 20 477 34 495 2.40e-140 412
Msa1344870 MtrunA17_Chr7g0232331 43.913 460 246 6 19 469 7 463 1.29e-137 404
Msa1344870 MtrunA17_Chr7g0232341 42.918 466 254 7 19 475 7 469 7.03e-135 397
Msa1344870 MtrunA17_Chr8g0335161 46.220 463 235 10 19 471 7 465 2.45e-134 396
Msa1344870 MtrunA17_Chr8g0335141 45.022 462 241 9 17 469 8 465 3.94e-133 393
Msa1344870 MtrunA17_Chr8g0334851 42.469 478 248 8 19 478 7 475 1.49e-132 392
Msa1344870 MtrunA17_Chr8g0334861 44.181 464 242 9 19 472 7 463 3.15e-131 388
Msa1344870 MtrunA17_Chr7g0232311 45.085 468 248 7 14 475 2 466 1.41e-129 384
Msa1344870 MtrunA17_Chr8g0361371 42.918 473 255 10 13 473 2 471 1.32e-128 382
Msa1344870 MtrunA17_Chr8g0334831 42.300 487 258 11 14 479 2 486 1.05e-124 372
Msa1344870 MtrunA17_Chr8g0339631 41.791 469 253 8 25 479 13 475 1.03e-122 366
Msa1344870 MtrunA17_Chr8g0373301 41.720 465 250 9 19 471 10 465 1.66e-122 366
Msa1344870 MtrunA17_Chr8g0339451 42.457 464 252 7 21 471 1 462 2.01e-122 365
Msa1344870 MtrunA17_Chr8g0339461 42.641 462 254 6 19 469 7 468 6.22e-121 362
Msa1344870 MtrunA17_Chr8g0339441 40.605 463 224 9 19 471 7 428 1.09e-109 332
Msa1344870 MtrunA17_Chr8g0370941 40.083 484 256 12 16 469 6 485 2.56e-106 325
Msa1344870 MtrunA17_Chr7g0232351 43.200 375 203 5 19 386 7 378 3.16e-104 316
Msa1344870 MtrunA17_Chr5g0403641 37.526 485 250 14 5 469 48 499 1.50e-94 295
Msa1344870 MtrunA17_Chr3g0079731 37.500 480 276 10 19 476 7 484 5.80e-94 293
Msa1344870 MtrunA17_Chr8g0339601 43.865 326 175 4 154 471 4 329 2.98e-93 286
Msa1344870 MtrunA17_Chr6g0462551 36.134 476 268 12 19 473 5 465 1.54e-90 284
Msa1344870 MtrunA17_Chr6g0462531 35.491 479 267 9 19 473 5 465 3.31e-90 283
Msa1344870 MtrunA17_Chr6g0462541 35.491 479 266 9 19 473 5 464 1.57e-87 276
Msa1344870 MtrunA17_Chr6g0462571 33.474 475 279 7 19 473 5 462 1.27e-85 271
Msa1344870 MtrunA17_Chr6g0462521 34.746 472 266 11 19 473 5 451 1.41e-84 268
Msa1344870 MtrunA17_Chr1g0153461 55.046 218 97 1 262 479 3 219 2.66e-84 259
Msa1344870 MtrunA17_Chr2g0302991 37.684 475 249 17 19 468 6 458 3.63e-80 256
Msa1344870 MtrunA17_Chr2g0302961 35.865 474 262 17 19 468 6 461 1.43e-75 244
Msa1344870 MtrunA17_Chr5g0448521 33.621 464 274 14 19 461 6 456 4.83e-68 225
Msa1344870 MtrunA17_Chr5g0429711 35.957 470 249 20 23 468 16 457 1.01e-67 224
Msa1344870 MtrunA17_Chr5g0429681 32.383 491 281 16 4 468 30 495 3.18e-66 221
Msa1344870 MtrunA17_Chr5g0442521 33.682 478 277 18 19 468 6 471 3.62e-66 220
Msa1344870 MtrunA17_Chr5g0442541 34.038 473 272 18 19 468 6 461 2.95e-65 218
Msa1344870 MtrunA17_Chr5g0442601 34.369 483 268 16 19 468 405 871 6.80e-65 225
Msa1344870 MtrunA17_Chr5g0442601 34.448 299 163 7 118 409 61 333 6.19e-41 156
Msa1344870 MtrunA17_Chr5g0442561 33.610 482 269 18 19 468 6 468 1.41e-64 216
Msa1344870 MtrunA17_Chr5g0442491 32.704 477 282 16 19 468 6 470 6.60e-64 214
Msa1344870 MtrunA17_Chr5g0442581 33.750 480 275 18 19 468 6 472 9.43e-64 215
Msa1344870 MtrunA17_Chr4g0050341 32.265 499 271 14 17 473 18 491 2.46e-62 211
Msa1344870 MtrunA17_Chr4g0053501 29.851 469 300 11 19 471 12 467 2.02e-60 206
Msa1344870 MtrunA17_Chr6g0449991 38.209 335 178 6 19 344 7 321 8.07e-60 199
Msa1344870 MtrunA17_Chr4g0044511 31.111 495 283 17 7 468 31 500 1.08e-59 204
Msa1344870 MtrunA17_Chr5g0442511 30.346 491 287 16 2 468 30 489 8.18e-58 199
Msa1344870 MtrunA17_Chr4g0053321 29.979 477 289 13 19 471 27 482 1.58e-56 195
Msa1344870 MtrunA17_Chr3g0078841 29.317 498 283 16 17 471 9 480 7.03e-56 193
Msa1344870 MtrunA17_Chr8g0366391 30.303 495 281 14 13 468 4 473 7.42e-56 193
Msa1344870 MtrunA17_Chr3g0112771 32.836 469 248 21 19 461 13 440 2.70e-55 191
Msa1344870 MtrunA17_Chr8g0337381 62.687 134 48 1 346 479 1 132 6.56e-55 179
Msa1344870 MtrunA17_Chr8g0361411 31.924 473 255 19 22 465 12 446 1.19e-54 189
Msa1344870 MtrunA17_Chr3g0092641 30.316 475 267 14 17 454 11 458 2.27e-54 189
Msa1344870 MtrunA17_Chr4g0042931 32.484 471 288 12 19 473 8 464 7.24e-54 187
Msa1344870 MtrunA17_Chr8g0359821 28.854 506 281 15 14 471 6 480 3.80e-53 186
Msa1344870 MtrunA17_Chr6g0464861 28.659 492 277 13 8 468 1 449 6.75e-53 184
Msa1344870 MtrunA17_Chr2g0329111 30.595 487 283 19 19 468 7 475 3.45e-52 183
Msa1344870 MtrunA17_Chr4g0044521 30.722 485 269 17 19 468 10 462 3.48e-52 183
Msa1344870 MtrunA17_Chr6g0464881 28.421 475 285 14 17 469 10 451 5.60e-52 182
Msa1344870 MtrunA17_Chr5g0426431 30.818 477 258 14 19 454 13 458 1.25e-51 182
Msa1344870 MtrunA17_Chr6g0464921 27.406 478 287 14 17 469 10 452 2.72e-51 180
Msa1344870 MtrunA17_Chr6g0454341 27.893 484 284 16 17 461 9 466 3.25e-51 181
Msa1344870 MtrunA17_Chr6g0464841 28.662 471 281 12 21 469 14 451 1.10e-50 179
Msa1344870 MtrunA17_Chr7g0265151 29.668 482 279 16 20 461 11 472 1.78e-50 179
Msa1344870 MtrunA17_Chr6g0454191 29.400 500 283 17 17 471 9 483 2.20e-50 178
Msa1344870 MtrunA17_Chr5g0401721 29.472 492 265 16 19 465 9 463 3.74e-50 177
Msa1344870 MtrunA17_Chr6g0454151 31.319 364 210 8 119 461 122 466 4.40e-50 177
Msa1344870 MtrunA17_Chr6g0454201 30.297 505 279 18 13 471 6 483 5.06e-50 177
Msa1344870 MtrunA17_Chr7g0265051 29.713 488 280 17 20 465 11 477 5.62e-50 178
Msa1344870 MtrunA17_Chr1g0159551 29.258 458 277 13 23 461 19 448 7.18e-50 176
Msa1344870 MtrunA17_Chr6g0454401 28.600 500 287 14 17 471 9 483 7.72e-50 177
Msa1344870 MtrunA17_Chr7g0218791 29.228 479 275 15 17 469 4 444 1.35e-49 175
Msa1344870 MtrunA17_Chr7g0265101 28.834 489 285 16 20 465 11 479 2.82e-49 176
Msa1344870 MtrunA17_Chr7g0243771 30.675 489 286 17 22 477 12 480 3.64e-49 175
Msa1344870 MtrunA17_Chr7g0218811 28.632 468 276 15 17 465 14 442 4.24e-49 174
Msa1344870 MtrunA17_Chr6g0464871 29.622 476 270 14 21 469 26 463 4.37e-49 174
Msa1344870 MtrunA17_Chr8g0382021 28.755 466 286 11 23 465 39 481 5.55e-49 175
Msa1344870 MtrunA17_Chr1g0173121 28.330 473 283 11 18 465 14 455 6.04e-49 174
Msa1344870 MtrunA17_Chr4g0042891 29.958 474 298 13 19 473 8 466 8.86e-49 174
Msa1344870 MtrunA17_Chr7g0243801 30.920 511 291 19 1 478 1 482 1.13e-48 174
Msa1344870 MtrunA17_Chr8g0336331 31.842 380 214 9 119 471 118 479 1.64e-48 173
Msa1344870 MtrunA17_Chr5g0414331 29.237 472 270 12 19 465 14 446 2.11e-48 172
Msa1344870 MtrunA17_Chr7g0243871 29.307 505 294 17 8 477 1 477 3.38e-48 172
Msa1344870 MtrunA17_Chr3g0079711 48.925 186 93 2 289 472 3 188 4.07e-48 164
Msa1344870 MtrunA17_Chr7g0243681 29.630 486 284 15 19 468 12 475 5.79e-48 172
Msa1344870 MtrunA17_Chr7g0265141 28.831 496 288 18 21 473 12 485 6.80e-48 172
Msa1344870 MtrunA17_Chr6g0454301 29.084 502 279 18 17 471 262 733 6.89e-48 176
Msa1344870 MtrunA17_Chr6g0454301 33.761 234 126 6 239 461 3 218 5.18e-34 135
Msa1344870 MtrunA17_Chr7g0217881 34.054 370 200 13 119 471 122 464 6.95e-48 171
Msa1344870 MtrunA17_Chr5g0414321 29.350 477 271 12 19 469 12 448 9.87e-48 171
Msa1344870 MtrunA17_Chr6g0482061 29.158 487 295 14 19 473 12 480 1.13e-47 171
Msa1344870 MtrunA17_Chr7g0265041 30.165 484 283 16 17 461 10 477 1.49e-47 171
Msa1344870 MtrunA17_Chr5g0412111 29.461 482 282 18 17 468 4 457 3.51e-47 169
Msa1344870 MtrunA17_Chr6g0454141 28.032 503 291 15 14 471 6 482 4.48e-47 169
Msa1344870 MtrunA17_Chr6g0454291 32.718 379 211 11 119 471 119 479 5.72e-47 169
Msa1344870 MtrunA17_Chr7g0218821 27.897 466 293 13 17 465 4 443 6.27e-47 168
Msa1344870 MtrunA17_Chr4g0032331 29.694 458 287 14 19 465 9 442 6.65e-47 168
Msa1344870 MtrunA17_Chr7g0243631 29.331 508 289 17 4 468 2 482 7.77e-47 169
Msa1344870 MtrunA17_Chr6g0454331 28.942 501 285 16 17 471 6 481 7.83e-47 169
Msa1344870 MtrunA17_Chr2g0278711 28.423 482 284 14 17 462 10 466 8.93e-47 169
Msa1344870 MtrunA17_Chr6g0453951 28.898 481 285 16 17 461 56 515 9.93e-47 169
Msa1344870 MtrunA17_Chr5g0426401 36.667 300 153 11 179 461 20 299 1.03e-46 164
Msa1344870 MtrunA17_Chr3g0121991 29.234 496 289 14 6 465 69 538 1.04e-46 170
Msa1344870 MtrunA17_Chr1g0207981 31.551 374 204 12 116 465 120 465 1.39e-46 168
Msa1344870 MtrunA17_Chr6g0454321 28.059 474 280 16 20 456 12 461 1.46e-46 171
Msa1344870 MtrunA17_Chr7g0243781 29.920 498 285 18 8 468 1 471 1.56e-46 168
Msa1344870 MtrunA17_Chr5g0419761 29.583 480 284 17 20 461 11 474 1.84e-46 168
Msa1344870 MtrunA17_Chr3g0118771 30.864 486 267 16 17 461 20 477 1.94e-46 168
Msa1344870 MtrunA17_Chr8g0380531 29.253 482 280 13 19 473 11 458 1.97e-46 167
Msa1344870 MtrunA17_Chr2g0307961 30.882 476 276 16 17 465 12 461 6.69e-46 166
Msa1344870 MtrunA17_Chr6g0454181 28.056 499 290 16 17 471 9 482 6.89e-46 166
Msa1344870 MtrunA17_Chr5g0412101 29.039 489 279 19 9 461 3 459 8.12e-46 166
Msa1344870 MtrunA17_Chr4g0060511 29.735 491 285 15 19 468 12 483 1.09e-45 166
Msa1344870 MtrunA17_Chr5g0412131 29.303 488 274 20 11 461 5 458 1.95e-45 165
Msa1344870 MtrunA17_Chr7g0243931 29.352 494 280 18 19 468 18 486 2.24e-45 165
Msa1344870 MtrunA17_Chr8g0365811 28.541 473 300 15 16 465 493 950 3.36e-45 169
Msa1344870 MtrunA17_Chr8g0365811 25.885 452 299 11 14 441 5 444 3.47e-38 148
Msa1344870 MtrunA17_Chr4g0011051 28.169 497 279 16 20 465 11 480 3.95e-45 164
Msa1344870 MtrunA17_Chr6g0454261 26.494 502 302 15 13 471 5 482 4.73e-45 164
Msa1344870 MtrunA17_Chr4g0066221 29.328 491 286 21 16 468 9 476 9.81e-45 163
Msa1344870 MtrunA17_Chr6g0453961 27.745 501 290 17 17 471 18 492 1.12e-44 163
Msa1344870 MtrunA17_Chr7g0249981 27.564 468 280 14 25 469 32 463 1.30e-44 163
Msa1344870 MtrunA17_Chr7g0243861 30.364 494 275 17 19 468 15 483 1.32e-44 163
Msa1344870 MtrunA17_Chr3g0122001 30.567 494 283 17 7 465 477 945 1.53e-44 167
Msa1344870 MtrunA17_Chr3g0122001 29.832 476 277 16 25 465 13 466 9.67e-41 156
Msa1344870 MtrunA17_Chr1g0207971 27.447 470 274 14 25 465 15 446 2.10e-44 162
Msa1344870 MtrunA17_Chr5g0420801 28.131 487 289 17 19 475 8 463 3.43e-44 161
Msa1344870 MtrunA17_Chr6g0454211 30.607 379 219 9 119 471 409 769 4.52e-44 165
Msa1344870 MtrunA17_Chr6g0454211 27.640 322 152 11 135 434 8 270 2.81e-23 103
Msa1344870 MtrunA17_Chr3g0118691 27.984 486 281 14 17 461 14 471 6.64e-44 161
Msa1344870 MtrunA17_Chr7g0275681 28.482 481 286 16 17 461 11 469 7.17e-44 160
Msa1344870 MtrunA17_Chr7g0243951 29.592 490 283 18 19 468 12 479 1.11e-43 160
Msa1344870 MtrunA17_Chr3g0118671 29.375 480 278 17 19 461 7 462 1.13e-43 160
Msa1344870 MtrunA17_Chr7g0243761 30.717 446 258 13 16 427 9 437 1.15e-43 160
Msa1344870 MtrunA17_Chr6g0454121 31.081 370 213 12 119 465 121 471 1.34e-43 160
Msa1344870 MtrunA17_Chr5g0440421 28.370 497 295 17 14 465 6 486 1.45e-43 160
Msa1344870 MtrunA17_Chr1g0161351 28.421 475 296 14 19 468 38 493 1.51e-43 160
Msa1344870 MtrunA17_Chr6g0454271 35.548 301 159 10 188 471 7 289 1.67e-43 155
Msa1344870 MtrunA17_Chr3g0098111 27.778 486 295 15 14 468 5 465 2.68e-43 159
Msa1344870 MtrunA17_Chr3g0118711 28.343 501 276 15 17 469 12 477 3.15e-43 159
Msa1344870 MtrunA17_Chr6g0454131 31.536 371 210 13 119 465 121 471 3.49e-43 159
Msa1344870 MtrunA17_Chr8g0336321 32.104 461 251 18 19 446 8 439 5.07e-43 158
Msa1344870 MtrunA17_Chr5g0431441 28.125 480 272 17 19 465 19 458 5.88e-43 158
Msa1344870 MtrunA17_Chr5g0423981 32.416 327 177 11 162 471 148 447 6.41e-43 157
Msa1344870 MtrunA17_Chr7g0250001 27.789 475 270 14 25 469 13 444 8.32e-43 157
Msa1344870 MtrunA17_Chr1g0207951 26.122 490 304 11 4 465 642 1101 9.59e-43 162
Msa1344870 MtrunA17_Chr1g0207951 25.355 493 298 11 4 465 110 563 5.82e-42 160
Msa1344870 MtrunA17_Chr8g0355221 27.680 513 289 16 6 468 2 482 1.02e-42 158
Msa1344870 MtrunA17_Chr1g0207861 28.330 473 299 15 19 468 9 464 1.17e-42 157
Msa1344870 MtrunA17_Chr8g0336251 31.887 461 252 18 19 446 8 439 1.56e-42 157
Msa1344870 MtrunA17_Chr5g0419771 28.056 499 265 16 28 468 46 508 1.89e-42 157
Msa1344870 MtrunA17_Chr7g0218831 27.872 470 279 19 15 465 4 432 2.05e-42 156
Msa1344870 MtrunA17_Chr6g0452771 31.316 380 215 11 119 471 122 482 2.27e-42 157
Msa1344870 MtrunA17_Chr5g0401851 27.236 492 306 13 13 468 4 479 3.27e-42 156
Msa1344870 MtrunA17_Chr5g0431371 28.692 474 279 16 13 465 6 441 3.28e-42 155
Msa1344870 MtrunA17_Chr3g0118721 34.680 297 146 9 188 461 7 278 4.77e-42 151
Msa1344870 MtrunA17_Chr8g0377921 29.485 485 279 18 15 465 1 456 4.82e-42 155
Msa1344870 MtrunA17_Chr3g0112761 28.216 482 269 18 21 470 11 447 5.69e-42 155
Msa1344870 MtrunA17_Chr8g0369341 27.383 493 295 15 19 475 8 473 6.65e-42 155
Msa1344870 MtrunA17_Chr4g0044501 27.490 502 277 17 16 468 8 471 1.62e-41 154
Msa1344870 MtrunA17_Chr1g0207931 26.496 468 259 12 12 461 86 486 1.77e-41 155
Msa1344870 MtrunA17_Chr5g0431361 26.539 471 285 12 19 465 13 446 2.33e-41 153
Msa1344870 MtrunA17_Chr1g0179901 26.984 504 269 19 19 461 17 482 2.78e-41 154
Msa1344870 MtrunA17_Chr3g0118701 26.477 491 296 11 17 468 14 478 3.19e-41 154
Msa1344870 MtrunA17_Chr7g0235051 29.730 481 264 16 19 468 12 449 3.95e-41 153
Msa1344870 MtrunA17_Chr4g0066151 33.942 274 151 9 215 465 206 472 4.08e-41 153
Msa1344870 MtrunA17_Chr4g0066261 28.367 490 269 22 28 468 21 477 7.02e-41 152
Msa1344870 MtrunA17_Chr4g0044481 28.398 412 232 10 19 409 28 397 8.64e-41 151
Msa1344870 MtrunA17_Chr7g0218841 27.235 481 266 19 17 465 5 433 9.93e-41 151
Msa1344870 MtrunA17_Chr5g0432731 33.220 295 164 7 179 461 12 285 1.02e-40 147
Msa1344870 MtrunA17_Chr3g0118661 28.512 484 280 19 17 461 12 468 1.63e-40 152
Msa1344870 MtrunA17_Chr5g0393591 27.253 455 279 11 19 465 18 428 2.22e-40 150
Msa1344870 MtrunA17_Chr4g0014061 27.016 496 285 16 16 468 7 468 4.87e-40 150
Msa1344870 MtrunA17_Chr7g0249931 27.105 487 300 15 4 469 28 480 5.02e-40 150
Msa1344870 MtrunA17_Chr4g0066131 27.642 492 285 20 9 461 4 463 5.66e-40 150
Msa1344870 MtrunA17_Chr7g0265111 27.470 506 291 16 9 465 30 508 6.52e-40 151
Msa1344870 MtrunA17_Chr6g0454361 30.685 365 213 11 119 461 123 469 1.33e-39 149
Msa1344870 MtrunA17_Chr5g0431421 27.991 468 279 15 19 465 11 441 1.75e-39 148
Msa1344870 MtrunA17_Chr5g0431401 27.234 470 286 12 19 468 11 444 3.84e-39 147
Msa1344870 MtrunA17_Chr6g0454221 35.319 235 122 8 239 461 3 219 4.19e-39 143
Msa1344870 MtrunA17_Chr7g0249961 33.730 252 136 5 230 469 24 256 5.40e-39 142
Msa1344870 MtrunA17_Chr6g0463861 33.692 279 151 11 215 468 200 469 6.56e-39 147
Msa1344870 MtrunA17_Chr8g0367221 27.176 471 307 10 7 458 1277 1730 8.35e-39 150
Msa1344870 MtrunA17_Chr8g0367221 28.279 488 298 14 19 477 799 1263 6.83e-38 148
Msa1344870 MtrunA17_Chr8g0367221 28.898 481 261 16 19 458 13 453 7.70e-37 145
Msa1344870 MtrunA17_Chr4g0072761 27.731 357 235 5 114 468 113 448 9.43e-39 146
Msa1344870 MtrunA17_Chr6g0454171 31.287 342 169 12 135 461 8 298 1.04e-38 143
Msa1344870 MtrunA17_Chr6g0463891 26.141 482 310 12 19 468 13 480 1.47e-38 146
Msa1344870 MtrunA17_Chr1g0165701 27.888 502 299 18 6 468 2 479 3.07e-38 145
Msa1344870 MtrunA17_Chr4g0072771 24.672 458 307 10 19 464 26 457 6.40e-38 144
Msa1344870 MtrunA17_Chr6g0454351 27.236 492 286 19 17 471 11 467 7.15e-38 144
Msa1344870 MtrunA17_Chr3g0106231 26.283 487 294 16 1 465 1 444 1.58e-37 143
Msa1344870 MtrunA17_Chr2g0294921 29.341 501 278 22 14 468 156 626 2.12e-37 145
Msa1344870 MtrunA17_Chr5g0409591 26.809 470 273 14 19 439 5 452 2.93e-37 142
Msa1344870 MtrunA17_Chr8g0377941 33.725 255 141 6 218 465 221 454 4.62e-37 142
Msa1344870 MtrunA17_Chr8g0374941 28.024 496 289 20 14 468 945 1413 5.32e-37 145
Msa1344870 MtrunA17_Chr8g0374941 28.247 485 280 21 14 457 7 464 1.25e-35 141
Msa1344870 MtrunA17_Chr8g0374941 28.131 487 290 20 5 454 463 926 1.06e-33 135
Msa1344870 MtrunA17_Chr4g0029131 28.704 432 274 13 19 438 13 422 7.76e-37 144
Msa1344870 MtrunA17_Chr8g0374971 33.692 279 151 10 215 468 207 476 8.75e-37 141
Msa1344870 MtrunA17_Chr8g0355011 29.912 341 179 9 119 448 46 337 1.16e-36 139
Msa1344870 MtrunA17_Chr5g0427571 39.184 245 123 7 215 446 42 273 2.26e-36 136
Msa1344870 MtrunA17_Chr8g0374901 28.317 505 274 21 14 468 8 474 2.65e-36 140
Msa1344870 MtrunA17_Chr4g0066281 28.016 489 286 23 13 468 7 462 6.91e-36 139
Msa1344870 MtrunA17_Chr7g0243851 34.286 280 140 8 217 468 175 438 6.97e-36 138
Msa1344870 MtrunA17_Chr7g0243711 34.701 268 139 7 221 468 61 312 8.61e-36 135
Msa1344870 MtrunA17_Chr8g0374931 28.423 482 289 19 16 461 9 470 9.47e-36 138
Msa1344870 MtrunA17_Chr7g0218311 33.333 279 150 9 215 468 212 479 1.09e-35 138
Msa1344870 MtrunA17_Chr5g0428081 26.132 486 311 16 14 468 7 475 1.23e-35 138
Msa1344870 MtrunA17_Chr5g0416741 26.531 490 296 17 19 468 14 479 1.42e-35 138
Msa1344870 MtrunA17_Chr1g0207831 31.439 264 148 4 218 468 216 459 2.38e-35 137
Msa1344870 MtrunA17_Chr4g0069611 28.821 458 269 15 15 447 11 436 3.28e-35 136
Msa1344870 MtrunA17_Chr4g0066201 25.198 504 307 17 1 468 1 470 4.73e-35 136
Msa1344870 MtrunA17_Chr2g0294941 34.701 268 140 12 215 457 107 364 1.09e-34 133
Msa1344870 MtrunA17_Chr4g0029151 28.146 437 260 14 19 433 21 425 3.44e-34 134
Msa1344870 MtrunA17_Chr6g0463851 25.697 502 313 18 14 475 7 488 3.97e-34 134
Msa1344870 MtrunA17_Chr2g0294931 32.374 278 155 8 215 468 209 477 4.32e-34 134
Msa1344870 MtrunA17_Chr3g0118751 26.283 487 259 12 17 461 5 433 5.36e-34 133
Msa1344870 MtrunA17_Chr4g0066171 25.455 495 308 17 5 468 8 472 5.94e-34 133
Msa1344870 MtrunA17_Chr8g0350881 32.258 279 159 8 213 468 205 476 9.59e-34 133
Msa1344870 MtrunA17_Chr6g0454251 28.606 416 226 14 17 387 6 395 2.04e-33 130
Msa1344870 MtrunA17_Chr2g0278721 28.731 449 283 12 16 447 13 441 4.41e-32 130
Msa1344870 MtrunA17_Chr2g0278721 34.177 237 130 6 225 453 740 958 5.18e-28 118
Msa1344870 MtrunA17_Chr3g0079721 29.861 288 174 8 19 283 6 288 1.09e-31 123
Msa1344870 MtrunA17_Chr3g0106251 29.730 296 168 8 179 461 14 282 1.27e-31 123
Msa1344870 MtrunA17_Chr7g0241781 25.893 448 260 15 19 447 10 404 2.61e-31 125
Msa1344870 MtrunA17_Chr5g0410941 25.662 491 301 17 16 468 21 485 3.74e-31 125
Msa1344870 MtrunA17_Chr8g0334841 37.989 179 92 4 179 351 1 166 6.96e-31 117
Msa1344870 MtrunA17_Chr1g0196851 27.527 465 261 18 19 448 50 473 1.13e-30 124
Msa1344870 MtrunA17_Chr2g0278741 27.233 459 295 11 7 447 86 523 1.42e-30 124
Msa1344870 MtrunA17_Chr7g0243911 35.648 216 113 6 254 457 14 215 2.21e-30 117
Msa1344870 MtrunA17_Chr5g0431431 31.636 275 144 8 179 442 116 357 2.42e-30 121
Msa1344870 MtrunA17_Chr6g0466831 26.338 467 272 14 19 453 19 445 2.48e-30 122
Msa1344870 MtrunA17_Chr5g0442501 32.609 322 186 12 19 321 6 315 3.15e-30 119
Msa1344870 MtrunA17_Chr5g0448551 24.622 463 296 15 17 460 6 434 4.16e-30 122
Msa1344870 MtrunA17_Chr7g0243611 35.545 211 109 6 213 409 74 271 9.00e-30 118
Msa1344870 MtrunA17_Chr6g0466841 28.285 449 274 15 19 447 19 439 1.30e-29 120
Msa1344870 MtrunA17_Chr7g0241801 26.622 447 258 15 19 447 10 404 2.89e-29 119
Msa1344870 MtrunA17_Chr4g0040711 25.166 453 305 12 16 453 6 439 1.64e-27 114
Msa1344870 MtrunA17_Chr6g0449971 63.750 80 29 0 396 475 1 80 1.96e-27 105
Msa1344870 MtrunA17_Chr5g0416821 25.259 483 300 19 19 468 15 469 2.66e-27 114
Msa1344870 MtrunA17_Chr3g0092031 34.783 184 103 3 265 447 6 173 5.37e-27 107
Msa1344870 MtrunA17_Chr4g0039881 34.335 233 127 6 225 448 199 414 1.08e-26 112
Msa1344870 MtrunA17_Chr7g0243811 35.961 203 103 7 217 409 190 375 1.33e-26 111
Msa1344870 MtrunA17_Chr2g0283041 27.533 454 252 17 19 437 8 419 2.46e-26 111
Msa1344870 MtrunA17_Chr8g0336261 36.129 155 81 5 285 439 1 137 2.71e-26 103
Msa1344870 MtrunA17_Chr6g0454371 36.126 191 100 7 285 471 1 173 4.20e-26 104
Msa1344870 MtrunA17_Chr2g0319761 28.866 485 277 19 15 467 4 452 1.18e-25 109
Msa1344870 MtrunA17_Chr2g0302851 32.468 231 132 5 225 447 223 437 5.58e-25 107
Msa1344870 MtrunA17_Chr4g0040691 26.316 456 284 14 16 448 6 432 5.72e-25 107
Msa1344870 MtrunA17_Chr4g0066141 40.132 152 75 5 331 468 198 347 5.98e-25 105
Msa1344870 MtrunA17_Chr6g0464091 32.468 231 132 5 225 447 232 446 1.02e-24 106
Msa1344870 MtrunA17_Chr8g0357361 30.837 227 125 7 217 431 63 269 1.42e-24 102
Msa1344870 MtrunA17_Chr2g0319791 28.033 478 249 18 16 448 5 432 2.53e-24 105
Msa1344870 MtrunA17_Chr4g0029161 26.464 427 252 15 19 433 13 389 8.15e-24 103
Msa1344870 MtrunA17_Chr6g0454231 27.600 250 132 8 215 462 5 207 1.26e-23 103
Msa1344870 MtrunA17_Chr2g0319751 27.313 454 277 16 8 437 474 898 3.90e-23 103
Msa1344870 MtrunA17_Chr2g0319751 25.553 497 267 17 16 473 6 438 1.00e-21 99.0
Msa1344870 MtrunA17_Chr7g0231631 27.143 280 159 9 209 468 1 255 2.04e-21 94.0
Msa1344870 MtrunA17_Chr2g0319801 25.902 471 300 16 19 467 9 452 4.53e-21 95.5
Msa1344870 MtrunA17_Chr6g0469961 38.406 138 75 2 178 305 27 164 4.68e-21 90.1
Msa1344870 MtrunA17_Chr1g0207881 37.097 124 75 2 340 461 251 373 5.02e-19 89.0
Msa1344870 MtrunA17_Chr2g0319731 25.636 472 300 18 19 467 26 469 8.33e-19 89.0
Msa1344870 MtrunA17_Chr5g0442551 28.920 287 161 12 87 356 34 294 1.89e-17 82.8
Msa1344870 MtrunA17_Chr6g0453981 30.964 197 114 5 135 309 8 204 3.16e-17 80.9
Msa1344870 MtrunA17_Chr7g0243731 43.836 73 41 0 344 416 6 78 1.05e-15 72.0
Msa1344870 MtrunA17_Chr6g0453941 30.244 205 120 5 128 309 53 257 4.27e-15 75.5
Msa1344870 MtrunA17_Chr2g0321331 30.178 169 88 4 270 437 91 230 1.24e-14 73.9
Msa1344870 MtrunA17_Chr7g0250021 23.926 326 181 10 21 309 15 310 2.68e-13 70.9
Msa1344870 MtrunA17_Chr6g0454391 39.394 66 36 2 363 428 13 74 1.30e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344870 AT4G01070.1 57.543 464 190 5 17 474 7 469 0.0 541
Msa1344870 AT1G01420.2 52.688 465 210 7 17 474 10 471 1.43e-171 492
Msa1344870 AT1G01420.1 52.688 465 210 7 17 474 7 468 1.72e-171 491
Msa1344870 AT1G01390.2 51.620 463 217 5 17 473 24 485 8.01e-160 462
Msa1344870 AT1G01390.1 51.620 463 217 5 17 473 7 468 9.81e-160 461
Msa1344870 AT4G01070.2 53.936 343 149 6 17 353 7 346 8.51e-119 352
Msa1344870 AT5G26310.1 38.758 467 262 11 17 468 6 463 3.84e-105 322
Msa1344870 AT5G66690.1 38.330 467 264 11 17 468 6 463 1.71e-101 312
Msa1344870 AT3G50740.1 37.716 464 260 11 17 460 6 460 1.55e-99 308
Msa1344870 AT2G18570.1 37.155 471 267 12 17 469 4 463 2.18e-98 304
Msa1344870 AT3G16520.3 36.910 466 270 8 19 472 6 459 3.35e-95 296
Msa1344870 AT3G16520.1 36.623 456 265 8 19 462 6 449 6.67e-92 287
Msa1344870 AT3G16520.2 36.947 452 261 8 19 458 6 445 7.71e-92 286
Msa1344870 AT2G18560.1 39.945 363 196 6 120 469 20 373 9.06e-87 271
Msa1344870 AT4G36770.1 37.691 459 245 16 20 455 6 446 2.27e-86 273
Msa1344870 AT1G07250.1 37.107 477 240 15 22 462 10 462 5.61e-83 265
Msa1344870 AT1G07260.1 34.647 482 260 17 12 461 2 460 8.08e-74 241
Msa1344870 AT1G07240.1 34.656 479 259 16 23 466 10 469 2.66e-72 237
Msa1344870 AT4G15280.2 33.745 486 281 16 4 461 22 494 1.17e-71 236
Msa1344870 AT2G29750.1 34.096 481 265 19 12 461 3 462 1.18e-70 233
Msa1344870 AT4G15280.1 34.328 469 271 17 19 461 5 462 2.25e-70 232
Msa1344870 AT2G29740.1 33.401 491 255 18 12 461 4 463 3.98e-69 228
Msa1344870 AT2G29730.1 31.381 478 261 16 23 465 10 455 7.54e-68 225
Msa1344870 AT3G21750.1 32.833 466 277 13 19 461 5 457 1.18e-67 224
Msa1344870 AT2G29710.1 31.828 465 276 15 23 465 10 455 2.43e-66 221
Msa1344870 AT3G21790.1 35.220 477 261 18 19 461 5 467 4.09e-66 221
Msa1344870 AT3G21800.1 33.689 469 275 13 23 465 10 468 1.07e-65 219
Msa1344870 AT3G21780.1 34.096 481 266 19 19 471 5 462 2.00e-62 211
Msa1344870 AT3G21760.1 33.817 482 263 17 19 461 5 469 3.35e-62 210
Msa1344870 AT1G22340.1 31.377 494 263 20 17 465 12 474 9.40e-58 199
Msa1344870 AT4G15260.1 35.593 354 199 12 126 461 1 343 1.24e-57 195
Msa1344870 AT1G22380.1 31.622 487 259 17 13 456 8 463 3.72e-57 197
Msa1344870 AT1G78270.1 30.621 467 278 11 17 454 12 461 1.34e-56 196
Msa1344870 AT1G22400.1 30.335 478 283 15 17 462 12 471 3.51e-56 194
Msa1344870 AT2G16890.2 29.485 485 281 14 19 471 10 465 4.58e-56 194
Msa1344870 AT5G14860.1 30.705 482 279 15 21 468 11 471 1.81e-55 192
Msa1344870 AT1G22360.1 29.918 488 268 16 19 463 11 467 2.57e-55 192
Msa1344870 AT2G15490.3 29.184 490 277 15 19 465 8 470 3.74e-54 189
Msa1344870 AT2G15490.1 29.184 490 280 15 19 465 8 473 7.34e-54 188
Msa1344870 AT2G15480.1 28.395 486 286 13 19 465 11 473 1.44e-53 187
Msa1344870 AT2G31750.1 30.398 477 276 13 19 471 9 453 1.47e-53 187
Msa1344870 AT2G31750.2 30.398 477 276 13 19 471 9 453 3.35e-53 186
Msa1344870 AT2G15480.2 28.313 498 281 14 19 465 11 483 1.07e-52 185
Msa1344870 AT1G10400.1 31.612 484 258 18 19 465 8 455 1.01e-51 182
Msa1344870 AT2G36970.1 29.684 475 280 15 17 461 9 459 1.23e-51 182
Msa1344870 AT2G36770.1 29.091 495 288 17 16 468 11 484 1.56e-51 182
Msa1344870 AT1G73880.1 28.747 487 265 17 19 465 15 459 2.41e-51 181
Msa1344870 AT2G30140.2 30.105 475 284 10 10 469 6 447 2.75e-51 181
Msa1344870 AT2G31790.1 30.021 473 279 11 19 468 9 452 4.77e-51 180
Msa1344870 AT2G30140.1 30.042 476 284 10 10 469 6 448 7.99e-51 179
Msa1344870 AT4G34131.1 27.950 483 283 12 19 461 11 468 1.06e-50 179
Msa1344870 AT5G03490.1 28.600 493 289 15 9 475 10 465 4.52e-50 177
Msa1344870 AT2G43820.1 29.072 485 253 17 19 465 8 439 5.63e-50 177
Msa1344870 AT2G16890.3 29.279 444 253 14 19 430 10 424 3.39e-49 174
Msa1344870 AT2G36780.1 29.583 480 290 15 20 465 16 481 4.14e-49 176
Msa1344870 AT2G36800.1 29.259 499 276 17 16 465 10 480 9.03e-49 175
Msa1344870 AT1G22370.2 30.189 477 266 14 17 456 12 458 1.52e-48 174
Msa1344870 AT1G22360.2 28.689 488 262 16 19 463 11 455 3.32e-48 172
Msa1344870 AT2G36750.1 29.424 486 291 17 16 465 7 476 4.63e-48 172
Msa1344870 AT5G59590.1 29.060 468 289 14 12 465 4 442 1.23e-47 171
Msa1344870 AT1G05675.1 29.202 476 279 14 19 469 7 449 1.40e-47 171
Msa1344870 AT3G46670.1 30.021 473 270 13 19 468 10 444 3.20e-47 169
Msa1344870 AT4G34138.1 28.221 489 282 14 21 468 14 474 1.18e-46 169
Msa1344870 AT1G51210.1 29.935 461 260 18 10 447 12 432 2.36e-46 167
Msa1344870 AT5G59580.1 29.386 456 280 14 19 461 10 436 2.72e-46 167
Msa1344870 AT1G05680.1 29.375 480 269 16 21 469 9 449 2.95e-46 167
Msa1344870 AT4G34135.1 28.661 478 287 11 19 461 12 470 4.62e-46 167
Msa1344870 AT3G53160.1 29.532 491 284 16 16 465 6 475 1.49e-45 166
Msa1344870 AT2G36760.1 27.976 504 284 18 12 465 7 481 3.05e-45 165
Msa1344870 AT3G46700.1 29.501 461 286 16 19 469 10 441 3.23e-45 164
Msa1344870 AT3G11340.1 28.788 462 292 13 13 465 4 437 8.79e-45 163
Msa1344870 AT1G24100.1 30.165 484 281 17 9 468 4 454 9.83e-45 163
Msa1344870 AT2G43840.2 28.016 489 265 17 19 471 8 445 1.01e-44 162
Msa1344870 AT2G36790.1 28.717 491 290 16 15 465 10 480 1.01e-44 164
Msa1344870 AT5G38040.1 30.310 452 272 13 28 465 20 442 1.51e-44 162
Msa1344870 AT3G46660.1 30.519 462 284 13 19 468 15 451 1.56e-44 162
Msa1344870 AT2G43840.1 28.016 489 265 17 19 471 8 445 2.41e-44 162
Msa1344870 AT3G21560.1 27.801 482 292 14 15 465 9 465 5.32e-44 162
Msa1344870 AT3G46650.1 29.412 459 272 14 12 460 4 420 5.38e-44 160
Msa1344870 AT5G05880.1 28.694 467 285 12 19 468 9 444 6.52e-44 160
Msa1344870 AT3G46690.1 29.512 471 276 14 19 468 10 445 8.39e-44 160
Msa1344870 AT5G05860.1 30.737 475 265 17 19 469 10 444 8.68e-44 160
Msa1344870 AT2G30150.2 28.992 476 265 13 19 465 14 445 1.15e-43 160
Msa1344870 AT5G12890.1 29.046 482 283 19 19 462 11 471 1.58e-43 160
Msa1344870 AT3G46680.1 28.903 474 291 14 12 469 3 446 1.76e-43 159
Msa1344870 AT2G30150.1 29.025 472 262 13 23 465 2 429 1.91e-43 159
Msa1344870 AT2G23260.1 27.607 489 259 15 19 465 11 446 6.17e-43 158
Msa1344870 AT5G05870.1 29.873 472 281 13 19 469 9 451 8.89e-43 158
Msa1344870 AT2G23250.1 28.062 449 284 12 28 465 8 428 3.75e-42 155
Msa1344870 AT1G22370.1 35.495 293 156 8 179 456 14 288 1.78e-40 148
Msa1344870 AT3G46720.1 29.614 466 275 14 19 469 10 437 2.45e-40 150
Msa1344870 AT5G38010.1 28.834 489 273 17 12 468 4 449 4.69e-40 150
Msa1344870 AT2G26480.1 29.979 477 265 17 19 469 9 442 9.33e-40 149
Msa1344870 AT4G15480.1 31.063 367 223 10 119 471 127 477 1.41e-39 149
Msa1344870 AT5G49690.1 30.123 488 249 19 12 458 4 440 2.05e-39 148
Msa1344870 AT3G53150.1 28.088 502 276 19 20 462 24 499 2.70e-39 149
Msa1344870 AT3G55700.1 26.923 468 294 15 19 468 9 446 4.91e-38 144
Msa1344870 AT5G05900.1 28.632 468 283 14 19 468 9 443 6.97e-38 144
Msa1344870 AT1G06000.1 35.361 263 149 8 217 468 177 429 7.28e-38 144
Msa1344870 AT3G02100.1 26.763 482 279 16 17 465 12 452 9.90e-38 144
Msa1344870 AT5G17050.1 29.412 357 214 10 119 463 117 447 3.76e-37 142
Msa1344870 AT3G55710.1 26.752 471 297 15 19 469 9 451 6.07e-37 142
Msa1344870 AT4G15500.1 26.471 476 307 13 17 471 8 461 8.45e-37 141
Msa1344870 AT5G05890.1 27.802 464 291 12 19 465 9 445 1.57e-36 140
Msa1344870 AT1G05560.2 27.621 496 273 15 9 465 46 494 2.89e-36 140
Msa1344870 AT4G15550.1 27.790 457 296 16 25 461 20 462 3.87e-36 139
Msa1344870 AT4G14090.1 26.739 460 279 16 25 461 20 444 7.43e-36 139
Msa1344870 AT1G05560.1 27.607 489 268 15 16 465 3 444 1.03e-35 138
Msa1344870 AT2G28080.1 25.572 481 276 20 23 463 23 461 3.05e-35 137
Msa1344870 AT5G65550.1 27.950 483 267 18 19 464 10 448 5.79e-35 136
Msa1344870 AT1G30530.1 27.467 375 243 9 95 461 86 439 1.04e-34 135
Msa1344870 AT4G15490.1 26.392 485 297 16 19 471 9 465 3.05e-34 134
Msa1344870 AT5G17040.1 26.733 404 245 11 83 461 51 428 2.11e-33 131
Msa1344870 AT5G17030.1 28.000 350 212 9 129 461 118 444 3.37e-31 125
Msa1344870 AT1G05530.1 31.325 332 188 11 145 465 145 447 1.53e-30 124
Msa1344870 AT5G17040.2 28.173 323 204 8 146 461 25 326 5.10e-30 120
Msa1344870 AT5G54010.1 26.526 426 280 11 21 437 9 410 7.50e-28 115
Msa1344870 AT1G64910.1 25.821 457 281 13 21 465 9 419 1.07e-27 115
Msa1344870 AT5G37950.2 31.449 283 165 11 113 387 77 338 1.18e-27 113
Msa1344870 AT1G50580.1 26.809 470 272 15 21 463 9 433 3.83e-27 114
Msa1344870 AT3G22250.1 24.786 468 285 17 17 451 7 440 9.98e-27 112
Msa1344870 AT1G64920.1 25.612 449 281 16 21 450 9 423 1.24e-26 112
Msa1344870 AT5G37950.1 30.208 288 168 11 113 387 77 344 1.75e-26 110
Msa1344870 AT2G22590.1 31.197 234 147 4 218 448 224 446 2.82e-26 111
Msa1344870 AT5G53990.1 24.368 435 272 12 21 437 9 404 1.59e-25 109
Msa1344870 AT5G54060.1 26.752 471 292 15 19 465 14 455 2.12e-25 108
Msa1344870 AT3G29630.1 26.522 460 262 15 21 450 9 422 3.93e-25 108
Msa1344870 AT4G27570.1 25.225 444 266 13 19 437 8 410 1.18e-24 106
Msa1344870 AT4G27560.1 25.225 444 266 14 19 437 8 410 5.69e-24 104
Msa1344870 AT2G22930.1 25.404 433 260 16 21 432 9 399 1.27e-22 100
Msa1344870 AT3G29630.2 26.638 458 238 16 21 450 9 396 1.46e-22 100
Msa1344870 AT4G09500.2 24.766 428 269 12 21 432 9 399 1.58e-19 91.3
Msa1344870 AT4G09500.1 31.875 160 97 2 273 432 227 374 6.49e-18 86.3
Msa1344870 AT2G16890.4 25.478 314 193 12 19 303 10 311 6.26e-16 79.0
Msa1344870 AT2G16890.1 25.478 314 193 12 19 303 10 311 6.26e-16 79.0
Msa1344870 AT4G34135.2 25.077 323 208 9 19 312 12 329 3.40e-15 77.0

Find 149 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGACCAGAAGTTGGTGAAAA+TGG 0.168719 tig0006912:+39909 Msa1344870:CDS
CAAACAGATGAAATTGCTTA+TGG 0.199225 tig0006912:+39546 Msa1344870:CDS
CCAGGGATGTTAAGCGGTTC+AGG 0.252657 tig0006912:-39201 None:intergenic
TGAGAGAGAGTAGGGTTTGA+TGG 0.256914 tig0006912:-38999 None:intergenic
AATGAAATGCAAATTCAATT+TGG 0.263350 tig0006912:-40113 None:intergenic
TGTGCTTGTGGGGCCCAATA+TGG 0.273884 tig0006912:-39726 None:intergenic
GTCGAGTTGGGGAAAATAAA+AGG 0.278544 tig0006912:-39148 None:intergenic
GGGTTTAGTGCTCCCATATT+GGG 0.279038 tig0006912:+39713 Msa1344870:CDS
ACTAATGCTCTAAAGGAAAA+TGG 0.302591 tig0006912:+40035 Msa1344870:CDS
AAAGGCAAAGGACAAATTAT+TGG 0.313826 tig0006912:-39130 None:intergenic
AAAAGTTCAGGGCGAGTTTA+GGG 0.316326 tig0006912:+39173 Msa1344870:CDS
AGAGGTGGTAGTTCTTGTTT+TGG 0.317291 tig0006912:-38712 None:intergenic
CCAACCTGTATCTTGTCATT+TGG 0.322441 tig0006912:-39302 None:intergenic
AAGTATTGTGAAGAGATTAA+TGG 0.323277 tig0006912:+39956 Msa1344870:CDS
TTTGAAGGTGGACCGTCGTT+TGG 0.341686 tig0006912:-38835 None:intergenic
GCTCTCATTATCGACCTATT+TGG 0.349459 tig0006912:+39042 Msa1344870:CDS
AATGAAGACTCTATTAATAA+TGG 0.349621 tig0006912:+39426 Msa1344870:CDS
GTGGCTATCATGAGTGGTTC+AGG 0.350177 tig0006912:-38952 None:intergenic
AGTGGTTCAGGTTTGGTGTT+GGG 0.353133 tig0006912:-38940 None:intergenic
TCGTCGTTTCGATCCTGAAC+CGG 0.353610 tig0006912:-39258 None:intergenic
GGGGTTTAGTGCTCCCATAT+TGG 0.353814 tig0006912:+39712 Msa1344870:CDS
AACAAAGCAAATATGTGAAT+TGG 0.358779 tig0006912:+40064 Msa1344870:CDS
GAAGGGAAGTAGAGATATGA+AGG 0.373108 tig0006912:-39102 None:intergenic
GTTCAGGTTTGGTGTTGGGT+GGG 0.379226 tig0006912:-38936 None:intergenic
AGTAGGGTTTGATGGAGAAA+AGG 0.381042 tig0006912:-38991 None:intergenic
AACGGTCCAACCGGATAAAC+CGG 0.383526 tig0006912:-39399 None:intergenic
TTGAAGGTGGACCGTCGTTT+GGG 0.386101 tig0006912:-38834 None:intergenic
GTCCTCTCTATAAAACCATT+TGG 0.387210 tig0006912:-39681 None:intergenic
GGTGATGGGGAGGTTATGTT+TGG 0.390204 tig0006912:-38803 None:intergenic
TTGGTGGAGAAAACACTTGT+AGG 0.396613 tig0006912:-39283 None:intergenic
CCTGGATGTTTCGCGGTTCA+CGG 0.397427 tig0006912:+39219 Msa1344870:CDS
CAAACCCTCCAATTGAGATA+TGG 0.401066 tig0006912:-39758 None:intergenic
AAACAGATGAAATTGCTTAT+GGG 0.403797 tig0006912:+39547 Msa1344870:CDS
GGCTCAAAACTTGTGCTTGT+GGG 0.405742 tig0006912:-39737 None:intergenic
GGTTCAGGTTTGGTGTTGGG+TGG 0.406627 tig0006912:-38937 None:intergenic
TTTCGATCCTGAACCGGGTC+TGG 0.407641 tig0006912:-39252 None:intergenic
CATCTGTTTGAGCACTAGTA+AGG 0.409084 tig0006912:-39533 None:intergenic
GGAAGTCTTGAGAGAGAGTA+GGG 0.409923 tig0006912:-39007 None:intergenic
GAATGAACCACCGGTTTATC+CGG 0.413273 tig0006912:+39389 Msa1344870:CDS
GGAATGAGATGTCCCATTCC+TGG 0.415310 tig0006912:-38754 None:intergenic
GTAGGGTTTGATGGAGAAAA+GGG 0.416042 tig0006912:-38990 None:intergenic
CTCTTGGCGAATTCGATCAT+TGG 0.416083 tig0006912:-38775 None:intergenic
AGTGTTATATTTGTGAATTT+TGG 0.416579 tig0006912:+39498 Msa1344870:CDS
AGGTCGGAGAGGGTGACCGG+AGG 0.427105 tig0006912:-38913 None:intergenic
GACCAGAAGTTGGTGAAAAT+GGG 0.428040 tig0006912:+39910 Msa1344870:CDS
TGTTGGGTGGGAGGTCGGAG+AGG 0.428201 tig0006912:-38924 None:intergenic
AGACTTACCAGACCCGGTTC+AGG 0.430252 tig0006912:+39245 Msa1344870:CDS
CGTCGTTTCGATCCTGAACC+GGG 0.431222 tig0006912:-39257 None:intergenic
CGAAGGCATCGGTGCCAAAT+AGG 0.433272 tig0006912:-39056 None:intergenic
GTGAAAATGGGTTGGTTCAA+AGG 0.435915 tig0006912:+39922 Msa1344870:CDS
ACCTGTATCTTGTCATTTGG+TGG 0.441067 tig0006912:-39299 None:intergenic
GTGCTTGTGGGGCCCAATAT+GGG 0.452728 tig0006912:-39725 None:intergenic
GGGAGGTCGGAGAGGGTGAC+CGG 0.452914 tig0006912:-38916 None:intergenic
TATCATGAGTGGTTCAGGTT+TGG 0.458073 tig0006912:-38947 None:intergenic
TGCAGCTACTAATGCTCTAA+AGG 0.458307 tig0006912:+40028 Msa1344870:CDS
TATGTGAATTGGCTCTCAAA+TGG 0.460975 tig0006912:+40075 Msa1344870:CDS
TCCACCAAATGACAAGATAC+AGG 0.462977 tig0006912:+39298 Msa1344870:CDS
CCGTGAACCGCGAAACATCC+AGG 0.464535 tig0006912:-39219 None:intergenic
TCATTCACTAACGGTCCAAC+CGG 0.470646 tig0006912:-39408 None:intergenic
TGACCGGAGGGAGGAAGACG+TGG 0.471383 tig0006912:-38900 None:intergenic
ACGGTGGTTTGAGCCTTTGA+AGG 0.474238 tig0006912:-38850 None:intergenic
TTCCCACGTCTTCCTCCCTC+CGG 0.474504 tig0006912:+38897 Msa1344870:CDS
TTTGGTGTTGGGTGGGAGGT+CGG 0.479826 tig0006912:-38929 None:intergenic
GTTGGGTGGGAGGTCGGAGA+GGG 0.481586 tig0006912:-38923 None:intergenic
CAGGTTTGGTGTTGGGTGGG+AGG 0.483627 tig0006912:-38933 None:intergenic
CTGGATGTTTCGCGGTTCAC+GGG 0.488956 tig0006912:+39220 Msa1344870:CDS
GACAAATTATTGGCAGTGGA+AGG 0.490991 tig0006912:-39120 None:intergenic
CATGTTTCCAACTCCAGGAA+TGG 0.491299 tig0006912:+38741 Msa1344870:CDS
GAGTGAACAGAGGTTCTTGT+GGG 0.491504 tig0006912:+39578 Msa1344870:CDS
AGATGTCCCATTCCTGGAGT+TGG 0.498438 tig0006912:-38748 None:intergenic
TGAAAATGGGTTGGTTCAAA+GGG 0.499576 tig0006912:+39923 Msa1344870:CDS
AGATGAAATTGCTTATGGGT+TGG 0.499668 tig0006912:+39551 Msa1344870:CDS
GGTTTGTGAGTCATTGTGGT+TGG 0.500489 tig0006912:+39775 Msa1344870:CDS
GAGTGGTTCAGGTTTGGTGT+TGG 0.501021 tig0006912:-38941 None:intergenic
ATGTTTCCAACTCCAGGAAT+GGG 0.505514 tig0006912:+38742 Msa1344870:CDS
GGAGGGTTTGTGAGTCATTG+TGG 0.507302 tig0006912:+39771 Msa1344870:CDS
TATAGAGAGGACTAAAGGGA+GGG 0.508561 tig0006912:+39692 Msa1344870:CDS
GAAGAGATTAATGGTAGGAG+AGG 0.510275 tig0006912:+39965 Msa1344870:CDS
CCTGAACCGCTTAACATCCC+TGG 0.512247 tig0006912:+39201 Msa1344870:CDS
ATAGAGAGGACTAAAGGGAG+GGG 0.515057 tig0006912:+39693 Msa1344870:CDS
GTAGCCATGTTTCCAACTCC+AGG 0.515967 tig0006912:+38736 Msa1344870:CDS
AAACGACGGTCCACCTTCAA+AGG 0.516202 tig0006912:+38837 Msa1344870:CDS
CAGGGATGTTAAGCGGTTCA+GGG 0.521709 tig0006912:-39200 None:intergenic
CGGAGAGGGTGACCGGAGGG+AGG 0.525328 tig0006912:-38909 None:intergenic
GGTCGGAGAGGGTGACCGGA+GGG 0.529432 tig0006912:-38912 None:intergenic
GAACCACCGGTTTATCCGGT+TGG 0.530877 tig0006912:+39393 Msa1344870:CDS
AGCGGCCATGTCGAAGGCAT+CGG 0.531743 tig0006912:-39067 None:intergenic
GAAGATTCGTTATAGAATGA+AGG 0.532123 tig0006912:+39995 Msa1344870:CDS
TTGAGCCATATCTCAATTGG+AGG 0.532313 tig0006912:+39753 Msa1344870:CDS
ATGAGGTAGGGAGGTGAGTA+CGG 0.533450 tig0006912:-38869 None:intergenic
GTTATGTTTGGAGAGTCTCT+TGG 0.533953 tig0006912:-38791 None:intergenic
TTTGGGATGATGAAGGTGAT+GGG 0.535963 tig0006912:-38817 None:intergenic
TGGCTCAAAACTTGTGCTTG+TGG 0.539656 tig0006912:-39738 None:intergenic
CGTGGGAAATGCCATGAGGT+AGG 0.542551 tig0006912:-38882 None:intergenic
TAATGAGAGCGGAGAGACGG+TGG 0.548732 tig0006912:-39029 None:intergenic
CGATAATGAGAGCGGAGAGA+CGG 0.549421 tig0006912:-39032 None:intergenic
CGGGAAAGACTTACCAGACC+CGG 0.549758 tig0006912:+39239 Msa1344870:CDS
ACAAGATACAGGTTGGCTAA+AGG 0.550407 tig0006912:+39309 Msa1344870:CDS
GGGAAGTCTTGAGAGAGAGT+AGG 0.551307 tig0006912:-39008 None:intergenic
TTATAGAGAGGACTAAAGGG+AGG 0.554403 tig0006912:+39691 Msa1344870:CDS
TAACATCCCTGGATGTTTCG+CGG 0.554616 tig0006912:+39212 Msa1344870:CDS
GTGGGAAATGCCATGAGGTA+GGG 0.564195 tig0006912:-38881 None:intergenic
GTGGTTTGAGCCTTTGAAGG+TGG 0.565246 tig0006912:-38847 None:intergenic
TTTGCAAAAGAATGAACCAC+CGG 0.567033 tig0006912:+39380 Msa1344870:CDS
GTTTGGGATGATGAAGGTGA+TGG 0.567107 tig0006912:-38818 None:intergenic
ATGGCGTGCCTTTGATTGCA+TGG 0.567986 tig0006912:+39823 Msa1344870:CDS
AAAAGGGATAGAACGAAGGA+TGG 0.568943 tig0006912:-38974 None:intergenic
GCTCAAAACTTGTGCTTGTG+GGG 0.569089 tig0006912:-39736 None:intergenic
AAAGGACAAATTATTGGCAG+TGG 0.572658 tig0006912:-39124 None:intergenic
TAGTTCAGCGGCCATGTCGA+AGG 0.575830 tig0006912:-39073 None:intergenic
TAGAGTGGCCATGCAATCAA+AGG 0.583957 tig0006912:-39831 None:intergenic
CATTCCTGGAGTTGGAAACA+TGG 0.584740 tig0006912:-38740 None:intergenic
ACAAATTATTGGCAGTGGAA+GGG 0.585831 tig0006912:-39119 None:intergenic
AGAAGTTGGTGAAAATGGGT+TGG 0.586555 tig0006912:+39914 Msa1344870:CDS
ACTCTTGAGAGTGTGGTGAA+TGG 0.595530 tig0006912:+39804 Msa1344870:CDS
AATGAGAGCGGAGAGACGGT+GGG 0.596140 tig0006912:-39028 None:intergenic
GTGGCTATTAGACCAGAAGT+TGG 0.604239 tig0006912:+39900 Msa1344870:CDS
TGGCACCGATGCCTTCGACA+TGG 0.604700 tig0006912:+39062 Msa1344870:CDS
ATAGAGTCTTCATTCACTAA+CGG 0.608480 tig0006912:-39417 None:intergenic
TGAGCCATATCTCAATTGGA+GGG 0.608515 tig0006912:+39754 Msa1344870:CDS
AAGGGAAGTAGAGATATGAA+GGG 0.609793 tig0006912:-39101 None:intergenic
CCAAATGACAAGATACAGGT+TGG 0.616802 tig0006912:+39302 Msa1344870:CDS
GTACTCACCTCCCTACCTCA+TGG 0.617400 tig0006912:+38871 Msa1344870:CDS
TTGGGGAAAATAAAAGGCAA+AGG 0.618995 tig0006912:-39142 None:intergenic
ATTGTGAAGAGATTAATGGT+AGG 0.621793 tig0006912:+39960 Msa1344870:CDS
CGTGAACCGCGAAACATCCA+GGG 0.627384 tig0006912:-39218 None:intergenic
TGAGTGAACAGAGGTTCTTG+TGG 0.633483 tig0006912:+39577 Msa1344870:CDS
GGAGAAAAGGGATAGAACGA+AGG 0.634146 tig0006912:-38978 None:intergenic
GAATTCAACTCTTGAGAGTG+TGG 0.636353 tig0006912:+39797 Msa1344870:CDS
GGATGATGAAGGTGATGGGG+AGG 0.636687 tig0006912:-38813 None:intergenic
TTGGGATGATGAAGGTGATG+GGG 0.637028 tig0006912:-38816 None:intergenic
GGAAACATGGCTACTAGAGG+TGG 0.638499 tig0006912:-38727 None:intergenic
AGGGATAGAACGAAGGATGG+TGG 0.657654 tig0006912:-38971 None:intergenic
GTTGGAAACATGGCTACTAG+AGG 0.658098 tig0006912:-38730 None:intergenic
GGAAATGCCATGAGGTAGGG+AGG 0.660050 tig0006912:-38878 None:intergenic
AGGATGGTGGCTATCATGAG+TGG 0.668437 tig0006912:-38958 None:intergenic
GACCGGAGGGAGGAAGACGT+GGG 0.670253 tig0006912:-38899 None:intergenic
ACCGTCGTTTGGGATGATGA+AGG 0.674382 tig0006912:-38824 None:intergenic
ACCTTCATCATCCCAAACGA+CGG 0.674674 tig0006912:+38823 Msa1344870:CDS
AAACATCCAGGGATGTTAAG+CGG 0.681929 tig0006912:-39207 None:intergenic
GAATTGGCTCTCAAATGGAA+AGG 0.691832 tig0006912:+40080 Msa1344870:CDS
AAATAGGTCGATAATGAGAG+CGG 0.695005 tig0006912:-39040 None:intergenic
TGAAGGGATATCTAGTTCAG+CGG 0.695711 tig0006912:-39085 None:intergenic
TGGTTGGATGAGCAGCCACG+TGG 0.702542 tig0006912:+39474 Msa1344870:CDS
AGGTAGGGAGGTGAGTACGG+TGG 0.711598 tig0006912:-38866 None:intergenic
GGTCCAACCGGATAAACCGG+TGG 0.727499 tig0006912:-39396 None:intergenic
GGTTGGAAATGAGTGAACAG+AGG 0.732256 tig0006912:+39568 Msa1344870:CDS
AAGACGTGGGAAATGCCATG+AGG 0.744338 tig0006912:-38886 None:intergenic
ACAAATATAACACTTCCACG+TGG 0.824473 tig0006912:-39489 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAGACTCTATTAATAA+TGG + tig0006912:39426-39445 Msa1344870:CDS 20.0%
!!! AGTGTTATATTTGTGAATTT+TGG + tig0006912:39498-39517 Msa1344870:CDS 20.0%
!! CATTTGGTAAAAATTCAAAA+GGG - tig0006912:39668-39687 None:intergenic 20.0%
!! AATGAAGACTCTATTAATAA+TGG + tig0006912:39426-39445 Msa1344870:CDS 20.0%
!!! AGTGTTATATTTGTGAATTT+TGG + tig0006912:39498-39517 Msa1344870:CDS 20.0%
!! CATTTGGTAAAAATTCAAAA+GGG - tig0006912:39668-39687 None:intergenic 20.0%
!! AATTTGATGTGTGTTTTCAA+TGG + tig0006912:39454-39473 Msa1344870:CDS 25.0%
! AAACAGATGAAATTGCTTAT+GGG + tig0006912:39547-39566 Msa1344870:CDS 25.0%
!! TCATTTTCAACTTTATCCTT+AGG - tig0006912:39615-39634 None:intergenic 25.0%
! CCATTTGGTAAAAATTCAAA+AGG - tig0006912:39669-39688 None:intergenic 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG + tig0006912:39666-39685 Msa1344870:CDS 25.0%
! TTTGAGTGAAAAAGTTAAAG+TGG + tig0006912:39881-39900 Msa1344870:CDS 25.0%
!! AAGTATTGTGAAGAGATTAA+TGG + tig0006912:39956-39975 Msa1344870:CDS 25.0%
! AACAAAGCAAATATGTGAAT+TGG + tig0006912:40064-40083 Msa1344870:CDS 25.0%
!! AATTTGATGTGTGTTTTCAA+TGG + tig0006912:39454-39473 Msa1344870:CDS 25.0%
! AAACAGATGAAATTGCTTAT+GGG + tig0006912:39547-39566 Msa1344870:CDS 25.0%
!! TCATTTTCAACTTTATCCTT+AGG - tig0006912:39615-39634 None:intergenic 25.0%
! CCATTTGGTAAAAATTCAAA+AGG - tig0006912:39669-39688 None:intergenic 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG + tig0006912:39666-39685 Msa1344870:CDS 25.0%
! TTTGAGTGAAAAAGTTAAAG+TGG + tig0006912:39881-39900 Msa1344870:CDS 25.0%
!! AAGTATTGTGAAGAGATTAA+TGG + tig0006912:39956-39975 Msa1344870:CDS 25.0%
! AACAAAGCAAATATGTGAAT+TGG + tig0006912:40064-40083 Msa1344870:CDS 25.0%
AAAGGCAAAGGACAAATTAT+TGG - tig0006912:39133-39152 None:intergenic 30.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG + tig0006912:39344-39363 Msa1344870:CDS 30.0%
ATAGAGTCTTCATTCACTAA+CGG - tig0006912:39420-39439 None:intergenic 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG + tig0006912:39506-39525 Msa1344870:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG + tig0006912:39507-39526 Msa1344870:CDS 30.0%
CAAACAGATGAAATTGCTTA+TGG + tig0006912:39546-39565 Msa1344870:CDS 30.0%
!!! TACCAAATGGTTTTATAGAG+AGG + tig0006912:39679-39698 Msa1344870:CDS 30.0%
! GTTTTATAGAGAGGACTAAA+GGG + tig0006912:39688-39707 Msa1344870:CDS 30.0%
ATTGTGAAGAGATTAATGGT+AGG + tig0006912:39960-39979 Msa1344870:CDS 30.0%
GAAGATTCGTTATAGAATGA+AGG + tig0006912:39995-40014 Msa1344870:CDS 30.0%
!! ACTAATGCTCTAAAGGAAAA+TGG + tig0006912:40035-40054 Msa1344870:CDS 30.0%
AAAGGCAAAGGACAAATTAT+TGG - tig0006912:39133-39152 None:intergenic 30.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG + tig0006912:39344-39363 Msa1344870:CDS 30.0%
ATAGAGTCTTCATTCACTAA+CGG - tig0006912:39420-39439 None:intergenic 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG + tig0006912:39506-39525 Msa1344870:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG + tig0006912:39507-39526 Msa1344870:CDS 30.0%
CAAACAGATGAAATTGCTTA+TGG + tig0006912:39546-39565 Msa1344870:CDS 30.0%
!!! TACCAAATGGTTTTATAGAG+AGG + tig0006912:39679-39698 Msa1344870:CDS 30.0%
! GTTTTATAGAGAGGACTAAA+GGG + tig0006912:39688-39707 Msa1344870:CDS 30.0%
ATTGTGAAGAGATTAATGGT+AGG + tig0006912:39960-39979 Msa1344870:CDS 30.0%
GAAGATTCGTTATAGAATGA+AGG + tig0006912:39995-40014 Msa1344870:CDS 30.0%
!! ACTAATGCTCTAAAGGAAAA+TGG + tig0006912:40035-40054 Msa1344870:CDS 30.0%
AAATAGGTCGATAATGAGAG+CGG - tig0006912:39043-39062 None:intergenic 35.0%
AAGGGAAGTAGAGATATGAA+GGG - tig0006912:39104-39123 None:intergenic 35.0%
ACAAATTATTGGCAGTGGAA+GGG - tig0006912:39122-39141 None:intergenic 35.0%
AAAGGACAAATTATTGGCAG+TGG - tig0006912:39127-39146 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG - tig0006912:39145-39164 None:intergenic 35.0%
TGCAAAAAAGTAATAGCCTC+CGG - tig0006912:39366-39385 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG + tig0006912:39380-39399 Msa1344870:CDS 35.0%
! TGATGTGTGTTTTCAATGGT+TGG + tig0006912:39458-39477 Msa1344870:CDS 35.0%
ACAAATATAACACTTCCACG+TGG - tig0006912:39492-39511 None:intergenic 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG + tig0006912:39508-39527 Msa1344870:CDS 35.0%
AGATGAAATTGCTTATGGGT+TGG + tig0006912:39551-39570 Msa1344870:CDS 35.0%
GTCCTCTCTATAAAACCATT+TGG - tig0006912:39684-39703 None:intergenic 35.0%
!! GGTTTTATAGAGAGGACTAA+AGG + tig0006912:39687-39706 Msa1344870:CDS 35.0%
!! GTTTTGAGCCATATCTCAAT+TGG + tig0006912:39750-39769 Msa1344870:CDS 35.0%
! ATCTTTTGTTCAGCATAGAG+TGG - tig0006912:39849-39868 None:intergenic 35.0%
!! TGAAAATGGGTTGGTTCAAA+GGG + tig0006912:39923-39942 Msa1344870:CDS 35.0%
! TATGTGAATTGGCTCTCAAA+TGG + tig0006912:40075-40094 Msa1344870:CDS 35.0%
AAATAGGTCGATAATGAGAG+CGG - tig0006912:39043-39062 None:intergenic 35.0%
AAGGGAAGTAGAGATATGAA+GGG - tig0006912:39104-39123 None:intergenic 35.0%
ACAAATTATTGGCAGTGGAA+GGG - tig0006912:39122-39141 None:intergenic 35.0%
AAAGGACAAATTATTGGCAG+TGG - tig0006912:39127-39146 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG - tig0006912:39145-39164 None:intergenic 35.0%
TGCAAAAAAGTAATAGCCTC+CGG - tig0006912:39366-39385 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG + tig0006912:39380-39399 Msa1344870:CDS 35.0%
! TGATGTGTGTTTTCAATGGT+TGG + tig0006912:39458-39477 Msa1344870:CDS 35.0%
ACAAATATAACACTTCCACG+TGG - tig0006912:39492-39511 None:intergenic 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG + tig0006912:39508-39527 Msa1344870:CDS 35.0%
AGATGAAATTGCTTATGGGT+TGG + tig0006912:39551-39570 Msa1344870:CDS 35.0%
GTCCTCTCTATAAAACCATT+TGG - tig0006912:39684-39703 None:intergenic 35.0%
!! GGTTTTATAGAGAGGACTAA+AGG + tig0006912:39687-39706 Msa1344870:CDS 35.0%
!! GTTTTGAGCCATATCTCAAT+TGG + tig0006912:39750-39769 Msa1344870:CDS 35.0%
! ATCTTTTGTTCAGCATAGAG+TGG - tig0006912:39849-39868 None:intergenic 35.0%
!! TGAAAATGGGTTGGTTCAAA+GGG + tig0006912:39923-39942 Msa1344870:CDS 35.0%
! TATGTGAATTGGCTCTCAAA+TGG + tig0006912:40075-40094 Msa1344870:CDS 35.0%
!!! TTCTTGTTTTGGTGTGGTGA+GGG - tig0006912:38704-38723 None:intergenic 40.0%
!!! TGGTAGTTCTTGTTTTGGTG+TGG - tig0006912:38710-38729 None:intergenic 40.0%
!! AGAGGTGGTAGTTCTTGTTT+TGG - tig0006912:38715-38734 None:intergenic 40.0%
ATGTTTCCAACTCCAGGAAT+GGG + tig0006912:38742-38761 Msa1344870:CDS 40.0%
GTTATGTTTGGAGAGTCTCT+TGG - tig0006912:38794-38813 None:intergenic 40.0%
! TTTGGGATGATGAAGGTGAT+GGG - tig0006912:38820-38839 None:intergenic 40.0%
! TATCATGAGTGGTTCAGGTT+TGG - tig0006912:38950-38969 None:intergenic 40.0%
AAAAGGGATAGAACGAAGGA+TGG - tig0006912:38977-38996 None:intergenic 40.0%
GTAGGGTTTGATGGAGAAAA+GGG - tig0006912:38993-39012 None:intergenic 40.0%
AGTAGGGTTTGATGGAGAAA+AGG - tig0006912:38994-39013 None:intergenic 40.0%
GCTCTCATTATCGACCTATT+TGG + tig0006912:39042-39061 Msa1344870:CDS 40.0%
! TGAAGGGATATCTAGTTCAG+CGG - tig0006912:39088-39107 None:intergenic 40.0%
GAAGGGAAGTAGAGATATGA+AGG - tig0006912:39105-39124 None:intergenic 40.0%
GACAAATTATTGGCAGTGGA+AGG - tig0006912:39123-39142 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG - tig0006912:39151-39170 None:intergenic 40.0%
!! TGAACTTTTTGGTCGAGTTG+GGG - tig0006912:39162-39181 None:intergenic 40.0%
!! CTGAACTTTTTGGTCGAGTT+GGG - tig0006912:39163-39182 None:intergenic 40.0%
CAACTCGACCAAAAAGTTCA+GGG + tig0006912:39162-39181 Msa1344870:CDS 40.0%
! TAAACTCGCCCTGAACTTTT+TGG - tig0006912:39173-39192 None:intergenic 40.0%
AAAAAGTTCAGGGCGAGTTT+AGG + tig0006912:39172-39191 Msa1344870:CDS 40.0%
AAAAGTTCAGGGCGAGTTTA+GGG + tig0006912:39173-39192 Msa1344870:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG - tig0006912:39210-39229 None:intergenic 40.0%
TTGGTGGAGAAAACACTTGT+AGG - tig0006912:39286-39305 None:intergenic 40.0%
TCCACCAAATGACAAGATAC+AGG + tig0006912:39298-39317 Msa1344870:CDS 40.0%
! ACCTGTATCTTGTCATTTGG+TGG - tig0006912:39302-39321 None:intergenic 40.0%
CCAACCTGTATCTTGTCATT+TGG - tig0006912:39305-39324 None:intergenic 40.0%
CCAAATGACAAGATACAGGT+TGG + tig0006912:39302-39321 Msa1344870:CDS 40.0%
! ACAAGATACAGGTTGGCTAA+AGG + tig0006912:39309-39328 Msa1344870:CDS 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG + tig0006912:39347-39366 Msa1344870:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG - tig0006912:39536-39555 None:intergenic 40.0%
! AGAGGTTCTTGTGGGTTTTA+AGG + tig0006912:39586-39605 Msa1344870:CDS 40.0%
TTATAGAGAGGACTAAAGGG+AGG + tig0006912:39691-39710 Msa1344870:CDS 40.0%
TATAGAGAGGACTAAAGGGA+GGG + tig0006912:39692-39711 Msa1344870:CDS 40.0%
TTGAGCCATATCTCAATTGG+AGG + tig0006912:39753-39772 Msa1344870:CDS 40.0%
TGAGCCATATCTCAATTGGA+GGG + tig0006912:39754-39773 Msa1344870:CDS 40.0%
CAAACCCTCCAATTGAGATA+TGG - tig0006912:39761-39780 None:intergenic 40.0%
GAATTCAACTCTTGAGAGTG+TGG + tig0006912:39797-39816 Msa1344870:CDS 40.0%
!! AGACCAGAAGTTGGTGAAAA+TGG + tig0006912:39909-39928 Msa1344870:CDS 40.0%
!! GACCAGAAGTTGGTGAAAAT+GGG + tig0006912:39910-39929 Msa1344870:CDS 40.0%
! AACCCATTTTCACCAACTTC+TGG - tig0006912:39915-39934 None:intergenic 40.0%
!! AGAAGTTGGTGAAAATGGGT+TGG + tig0006912:39914-39933 Msa1344870:CDS 40.0%
!! GTGAAAATGGGTTGGTTCAA+AGG + tig0006912:39922-39941 Msa1344870:CDS 40.0%
GAAGAGATTAATGGTAGGAG+AGG + tig0006912:39965-39984 Msa1344870:CDS 40.0%
TGCAGCTACTAATGCTCTAA+AGG + tig0006912:40028-40047 Msa1344870:CDS 40.0%
! GAATTGGCTCTCAAATGGAA+AGG + tig0006912:40080-40099 Msa1344870:CDS 40.0%
!!! TTCTTGTTTTGGTGTGGTGA+GGG - tig0006912:38704-38723 None:intergenic 40.0%
!!! TGGTAGTTCTTGTTTTGGTG+TGG - tig0006912:38710-38729 None:intergenic 40.0%
!! AGAGGTGGTAGTTCTTGTTT+TGG - tig0006912:38715-38734 None:intergenic 40.0%
ATGTTTCCAACTCCAGGAAT+GGG + tig0006912:38742-38761 Msa1344870:CDS 40.0%
GTTATGTTTGGAGAGTCTCT+TGG - tig0006912:38794-38813 None:intergenic 40.0%
! TTTGGGATGATGAAGGTGAT+GGG - tig0006912:38820-38839 None:intergenic 40.0%
! TATCATGAGTGGTTCAGGTT+TGG - tig0006912:38950-38969 None:intergenic 40.0%
AAAAGGGATAGAACGAAGGA+TGG - tig0006912:38977-38996 None:intergenic 40.0%
GTAGGGTTTGATGGAGAAAA+GGG - tig0006912:38993-39012 None:intergenic 40.0%
AGTAGGGTTTGATGGAGAAA+AGG - tig0006912:38994-39013 None:intergenic 40.0%
GCTCTCATTATCGACCTATT+TGG + tig0006912:39042-39061 Msa1344870:CDS 40.0%
! TGAAGGGATATCTAGTTCAG+CGG - tig0006912:39088-39107 None:intergenic 40.0%
GAAGGGAAGTAGAGATATGA+AGG - tig0006912:39105-39124 None:intergenic 40.0%
GACAAATTATTGGCAGTGGA+AGG - tig0006912:39123-39142 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG - tig0006912:39151-39170 None:intergenic 40.0%
!! TGAACTTTTTGGTCGAGTTG+GGG - tig0006912:39162-39181 None:intergenic 40.0%
!! CTGAACTTTTTGGTCGAGTT+GGG - tig0006912:39163-39182 None:intergenic 40.0%
CAACTCGACCAAAAAGTTCA+GGG + tig0006912:39162-39181 Msa1344870:CDS 40.0%
! TAAACTCGCCCTGAACTTTT+TGG - tig0006912:39173-39192 None:intergenic 40.0%
AAAAAGTTCAGGGCGAGTTT+AGG + tig0006912:39172-39191 Msa1344870:CDS 40.0%
AAAAGTTCAGGGCGAGTTTA+GGG + tig0006912:39173-39192 Msa1344870:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG - tig0006912:39210-39229 None:intergenic 40.0%
TTGGTGGAGAAAACACTTGT+AGG - tig0006912:39286-39305 None:intergenic 40.0%
TCCACCAAATGACAAGATAC+AGG + tig0006912:39298-39317 Msa1344870:CDS 40.0%
! ACCTGTATCTTGTCATTTGG+TGG - tig0006912:39302-39321 None:intergenic 40.0%
CCAACCTGTATCTTGTCATT+TGG - tig0006912:39305-39324 None:intergenic 40.0%
CCAAATGACAAGATACAGGT+TGG + tig0006912:39302-39321 Msa1344870:CDS 40.0%
! ACAAGATACAGGTTGGCTAA+AGG + tig0006912:39309-39328 Msa1344870:CDS 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG + tig0006912:39347-39366 Msa1344870:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG - tig0006912:39536-39555 None:intergenic 40.0%
! AGAGGTTCTTGTGGGTTTTA+AGG + tig0006912:39586-39605 Msa1344870:CDS 40.0%
TTATAGAGAGGACTAAAGGG+AGG + tig0006912:39691-39710 Msa1344870:CDS 40.0%
TATAGAGAGGACTAAAGGGA+GGG + tig0006912:39692-39711 Msa1344870:CDS 40.0%
TTGAGCCATATCTCAATTGG+AGG + tig0006912:39753-39772 Msa1344870:CDS 40.0%
TGAGCCATATCTCAATTGGA+GGG + tig0006912:39754-39773 Msa1344870:CDS 40.0%
CAAACCCTCCAATTGAGATA+TGG - tig0006912:39761-39780 None:intergenic 40.0%
GAATTCAACTCTTGAGAGTG+TGG + tig0006912:39797-39816 Msa1344870:CDS 40.0%
!! AGACCAGAAGTTGGTGAAAA+TGG + tig0006912:39909-39928 Msa1344870:CDS 40.0%
!! GACCAGAAGTTGGTGAAAAT+GGG + tig0006912:39910-39929 Msa1344870:CDS 40.0%
! AACCCATTTTCACCAACTTC+TGG - tig0006912:39915-39934 None:intergenic 40.0%
!! AGAAGTTGGTGAAAATGGGT+TGG + tig0006912:39914-39933 Msa1344870:CDS 40.0%
!! GTGAAAATGGGTTGGTTCAA+AGG + tig0006912:39922-39941 Msa1344870:CDS 40.0%
GAAGAGATTAATGGTAGGAG+AGG + tig0006912:39965-39984 Msa1344870:CDS 40.0%
TGCAGCTACTAATGCTCTAA+AGG + tig0006912:40028-40047 Msa1344870:CDS 40.0%
! GAATTGGCTCTCAAATGGAA+AGG + tig0006912:40080-40099 Msa1344870:CDS 40.0%
!!! GTTCTTGTTTTGGTGTGGTG+AGG - tig0006912:38705-38724 None:intergenic 45.0%
GTTGGAAACATGGCTACTAG+AGG - tig0006912:38733-38752 None:intergenic 45.0%
CATTCCTGGAGTTGGAAACA+TGG - tig0006912:38743-38762 None:intergenic 45.0%
CATGTTTCCAACTCCAGGAA+TGG + tig0006912:38741-38760 Msa1344870:CDS 45.0%
CTCTTGGCGAATTCGATCAT+TGG - tig0006912:38778-38797 None:intergenic 45.0%
TTGGGATGATGAAGGTGATG+GGG - tig0006912:38819-38838 None:intergenic 45.0%
! GTTTGGGATGATGAAGGTGA+TGG - tig0006912:38821-38840 None:intergenic 45.0%
ACCTTCATCATCCCAAACGA+CGG + tig0006912:38823-38842 Msa1344870:CDS 45.0%
!! AGTGGTTCAGGTTTGGTGTT+GGG - tig0006912:38943-38962 None:intergenic 45.0%
GGAGAAAAGGGATAGAACGA+AGG - tig0006912:38981-39000 None:intergenic 45.0%
TGAGAGAGAGTAGGGTTTGA+TGG - tig0006912:39002-39021 None:intergenic 45.0%
GGAAGTCTTGAGAGAGAGTA+GGG - tig0006912:39010-39029 None:intergenic 45.0%
!! CCTGAACTTTTTGGTCGAGT+TGG - tig0006912:39164-39183 None:intergenic 45.0%
CCAACTCGACCAAAAAGTTC+AGG + tig0006912:39161-39180 Msa1344870:CDS 45.0%
TAACATCCCTGGATGTTTCG+CGG + tig0006912:39212-39231 Msa1344870:CDS 45.0%
!! GAATGAACCACCGGTTTATC+CGG + tig0006912:39389-39408 Msa1344870:CDS 45.0%
TCATTCACTAACGGTCCAAC+CGG - tig0006912:39411-39430 None:intergenic 45.0%
GGTTGGAAATGAGTGAACAG+AGG + tig0006912:39568-39587 Msa1344870:CDS 45.0%
TGAGTGAACAGAGGTTCTTG+TGG + tig0006912:39577-39596 Msa1344870:CDS 45.0%
GAGTGAACAGAGGTTCTTGT+GGG + tig0006912:39578-39597 Msa1344870:CDS 45.0%
!!! GTGGGTTTTAAGGTGTCCTA+AGG + tig0006912:39596-39615 Msa1344870:CDS 45.0%
ATAGAGAGGACTAAAGGGAG+GGG + tig0006912:39693-39712 Msa1344870:CDS 45.0%
GGGTTTAGTGCTCCCATATT+GGG + tig0006912:39713-39732 Msa1344870:CDS 45.0%
GCTCAAAACTTGTGCTTGTG+GGG - tig0006912:39739-39758 None:intergenic 45.0%
GGCTCAAAACTTGTGCTTGT+GGG - tig0006912:39740-39759 None:intergenic 45.0%
TGGCTCAAAACTTGTGCTTG+TGG - tig0006912:39741-39760 None:intergenic 45.0%
GGTTTGTGAGTCATTGTGGT+TGG + tig0006912:39775-39794 Msa1344870:CDS 45.0%
! ACTCTTGAGAGTGTGGTGAA+TGG + tig0006912:39804-39823 Msa1344870:CDS 45.0%
TAGAGTGGCCATGCAATCAA+AGG - tig0006912:39834-39853 None:intergenic 45.0%
GTGGCTATTAGACCAGAAGT+TGG + tig0006912:39900-39919 Msa1344870:CDS 45.0%
!!! GTTCTTGTTTTGGTGTGGTG+AGG - tig0006912:38705-38724 None:intergenic 45.0%
GTTGGAAACATGGCTACTAG+AGG - tig0006912:38733-38752 None:intergenic 45.0%
CATTCCTGGAGTTGGAAACA+TGG - tig0006912:38743-38762 None:intergenic 45.0%
CATGTTTCCAACTCCAGGAA+TGG + tig0006912:38741-38760 Msa1344870:CDS 45.0%
CTCTTGGCGAATTCGATCAT+TGG - tig0006912:38778-38797 None:intergenic 45.0%
TTGGGATGATGAAGGTGATG+GGG - tig0006912:38819-38838 None:intergenic 45.0%
! GTTTGGGATGATGAAGGTGA+TGG - tig0006912:38821-38840 None:intergenic 45.0%
ACCTTCATCATCCCAAACGA+CGG + tig0006912:38823-38842 Msa1344870:CDS 45.0%
!! AGTGGTTCAGGTTTGGTGTT+GGG - tig0006912:38943-38962 None:intergenic 45.0%
GGAGAAAAGGGATAGAACGA+AGG - tig0006912:38981-39000 None:intergenic 45.0%
TGAGAGAGAGTAGGGTTTGA+TGG - tig0006912:39002-39021 None:intergenic 45.0%
GGAAGTCTTGAGAGAGAGTA+GGG - tig0006912:39010-39029 None:intergenic 45.0%
!! CCTGAACTTTTTGGTCGAGT+TGG - tig0006912:39164-39183 None:intergenic 45.0%
CCAACTCGACCAAAAAGTTC+AGG + tig0006912:39161-39180 Msa1344870:CDS 45.0%
TAACATCCCTGGATGTTTCG+CGG + tig0006912:39212-39231 Msa1344870:CDS 45.0%
!! GAATGAACCACCGGTTTATC+CGG + tig0006912:39389-39408 Msa1344870:CDS 45.0%
TCATTCACTAACGGTCCAAC+CGG - tig0006912:39411-39430 None:intergenic 45.0%
GGTTGGAAATGAGTGAACAG+AGG + tig0006912:39568-39587 Msa1344870:CDS 45.0%
TGAGTGAACAGAGGTTCTTG+TGG + tig0006912:39577-39596 Msa1344870:CDS 45.0%
GAGTGAACAGAGGTTCTTGT+GGG + tig0006912:39578-39597 Msa1344870:CDS 45.0%
!!! GTGGGTTTTAAGGTGTCCTA+AGG + tig0006912:39596-39615 Msa1344870:CDS 45.0%
ATAGAGAGGACTAAAGGGAG+GGG + tig0006912:39693-39712 Msa1344870:CDS 45.0%
GGGTTTAGTGCTCCCATATT+GGG + tig0006912:39713-39732 Msa1344870:CDS 45.0%
GCTCAAAACTTGTGCTTGTG+GGG - tig0006912:39739-39758 None:intergenic 45.0%
GGCTCAAAACTTGTGCTTGT+GGG - tig0006912:39740-39759 None:intergenic 45.0%
TGGCTCAAAACTTGTGCTTG+TGG - tig0006912:39741-39760 None:intergenic 45.0%
GGTTTGTGAGTCATTGTGGT+TGG + tig0006912:39775-39794 Msa1344870:CDS 45.0%
! ACTCTTGAGAGTGTGGTGAA+TGG + tig0006912:39804-39823 Msa1344870:CDS 45.0%
TAGAGTGGCCATGCAATCAA+AGG - tig0006912:39834-39853 None:intergenic 45.0%
GTGGCTATTAGACCAGAAGT+TGG + tig0006912:39900-39919 Msa1344870:CDS 45.0%
GGAAACATGGCTACTAGAGG+TGG - tig0006912:38730-38749 None:intergenic 50.0%
GTAGCCATGTTTCCAACTCC+AGG + tig0006912:38736-38755 Msa1344870:CDS 50.0%
AGATGTCCCATTCCTGGAGT+TGG - tig0006912:38751-38770 None:intergenic 50.0%
GGAATGAGATGTCCCATTCC+TGG - tig0006912:38757-38776 None:intergenic 50.0%
!! GGTGATGGGGAGGTTATGTT+TGG - tig0006912:38806-38825 None:intergenic 50.0%
! ACCGTCGTTTGGGATGATGA+AGG - tig0006912:38827-38846 None:intergenic 50.0%
TTGAAGGTGGACCGTCGTTT+GGG - tig0006912:38837-38856 None:intergenic 50.0%
TTTGAAGGTGGACCGTCGTT+TGG - tig0006912:38838-38857 None:intergenic 50.0%
AAACGACGGTCCACCTTCAA+AGG + tig0006912:38837-38856 Msa1344870:CDS 50.0%
! GTGGTTTGAGCCTTTGAAGG+TGG - tig0006912:38850-38869 None:intergenic 50.0%
ACGGTGGTTTGAGCCTTTGA+AGG - tig0006912:38853-38872 None:intergenic 50.0%
ATGAGGTAGGGAGGTGAGTA+CGG - tig0006912:38872-38891 None:intergenic 50.0%
GTGGGAAATGCCATGAGGTA+GGG - tig0006912:38884-38903 None:intergenic 50.0%
AAGACGTGGGAAATGCCATG+AGG - tig0006912:38889-38908 None:intergenic 50.0%
!! GTTCAGGTTTGGTGTTGGGT+GGG - tig0006912:38939-38958 None:intergenic 50.0%
!! GAGTGGTTCAGGTTTGGTGT+TGG - tig0006912:38944-38963 None:intergenic 50.0%
GTGGCTATCATGAGTGGTTC+AGG - tig0006912:38955-38974 None:intergenic 50.0%
! AGGATGGTGGCTATCATGAG+TGG - tig0006912:38961-38980 None:intergenic 50.0%
AGGGATAGAACGAAGGATGG+TGG - tig0006912:38974-38993 None:intergenic 50.0%
GGGAAGTCTTGAGAGAGAGT+AGG - tig0006912:39011-39030 None:intergenic 50.0%
CGATAATGAGAGCGGAGAGA+CGG - tig0006912:39035-39054 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG - tig0006912:39203-39222 None:intergenic 50.0%
TCGTCGTTTCGATCCTGAAC+CGG - tig0006912:39261-39280 None:intergenic 50.0%
AACGGTCCAACCGGATAAAC+CGG - tig0006912:39402-39421 None:intergenic 50.0%
GGGGTTTAGTGCTCCCATAT+TGG + tig0006912:39712-39731 Msa1344870:CDS 50.0%
GGAGGGTTTGTGAGTCATTG+TGG + tig0006912:39771-39790 Msa1344870:CDS 50.0%
ATGGCGTGCCTTTGATTGCA+TGG + tig0006912:39823-39842 Msa1344870:CDS 50.0%
GGAAACATGGCTACTAGAGG+TGG - tig0006912:38730-38749 None:intergenic 50.0%
GTAGCCATGTTTCCAACTCC+AGG + tig0006912:38736-38755 Msa1344870:CDS 50.0%
AGATGTCCCATTCCTGGAGT+TGG - tig0006912:38751-38770 None:intergenic 50.0%
GGAATGAGATGTCCCATTCC+TGG - tig0006912:38757-38776 None:intergenic 50.0%
!! GGTGATGGGGAGGTTATGTT+TGG - tig0006912:38806-38825 None:intergenic 50.0%
! ACCGTCGTTTGGGATGATGA+AGG - tig0006912:38827-38846 None:intergenic 50.0%
TTGAAGGTGGACCGTCGTTT+GGG - tig0006912:38837-38856 None:intergenic 50.0%
TTTGAAGGTGGACCGTCGTT+TGG - tig0006912:38838-38857 None:intergenic 50.0%
AAACGACGGTCCACCTTCAA+AGG + tig0006912:38837-38856 Msa1344870:CDS 50.0%
! GTGGTTTGAGCCTTTGAAGG+TGG - tig0006912:38850-38869 None:intergenic 50.0%
ACGGTGGTTTGAGCCTTTGA+AGG - tig0006912:38853-38872 None:intergenic 50.0%
ATGAGGTAGGGAGGTGAGTA+CGG - tig0006912:38872-38891 None:intergenic 50.0%
GTGGGAAATGCCATGAGGTA+GGG - tig0006912:38884-38903 None:intergenic 50.0%
AAGACGTGGGAAATGCCATG+AGG - tig0006912:38889-38908 None:intergenic 50.0%
!! GTTCAGGTTTGGTGTTGGGT+GGG - tig0006912:38939-38958 None:intergenic 50.0%
!! GAGTGGTTCAGGTTTGGTGT+TGG - tig0006912:38944-38963 None:intergenic 50.0%
GTGGCTATCATGAGTGGTTC+AGG - tig0006912:38955-38974 None:intergenic 50.0%
! AGGATGGTGGCTATCATGAG+TGG - tig0006912:38961-38980 None:intergenic 50.0%
AGGGATAGAACGAAGGATGG+TGG - tig0006912:38974-38993 None:intergenic 50.0%
GGGAAGTCTTGAGAGAGAGT+AGG - tig0006912:39011-39030 None:intergenic 50.0%
CGATAATGAGAGCGGAGAGA+CGG - tig0006912:39035-39054 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG - tig0006912:39203-39222 None:intergenic 50.0%
TCGTCGTTTCGATCCTGAAC+CGG - tig0006912:39261-39280 None:intergenic 50.0%
AACGGTCCAACCGGATAAAC+CGG - tig0006912:39402-39421 None:intergenic 50.0%
GGGGTTTAGTGCTCCCATAT+TGG + tig0006912:39712-39731 Msa1344870:CDS 50.0%
GGAGGGTTTGTGAGTCATTG+TGG + tig0006912:39771-39790 Msa1344870:CDS 50.0%
ATGGCGTGCCTTTGATTGCA+TGG + tig0006912:39823-39842 Msa1344870:CDS 50.0%
!! GGATGATGAAGGTGATGGGG+AGG - tig0006912:38816-38835 None:intergenic 55.0%
GTACTCACCTCCCTACCTCA+TGG + tig0006912:38871-38890 Msa1344870:CDS 55.0%
GGAAATGCCATGAGGTAGGG+AGG - tig0006912:38881-38900 None:intergenic 55.0%
CGTGGGAAATGCCATGAGGT+AGG - tig0006912:38885-38904 None:intergenic 55.0%
!! TTTGGTGTTGGGTGGGAGGT+CGG - tig0006912:38932-38951 None:intergenic 55.0%
!! GGTTCAGGTTTGGTGTTGGG+TGG - tig0006912:38940-38959 None:intergenic 55.0%
AATGAGAGCGGAGAGACGGT+GGG - tig0006912:39031-39050 None:intergenic 55.0%
TAATGAGAGCGGAGAGACGG+TGG - tig0006912:39032-39051 None:intergenic 55.0%
!! CGAAGGCATCGGTGCCAAAT+AGG - tig0006912:39059-39078 None:intergenic 55.0%
TAGTTCAGCGGCCATGTCGA+AGG - tig0006912:39076-39095 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG - tig0006912:39204-39223 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG + tig0006912:39201-39220 Msa1344870:CDS 55.0%
CGTGAACCGCGAAACATCCA+GGG - tig0006912:39221-39240 None:intergenic 55.0%
CCTGGATGTTTCGCGGTTCA+CGG + tig0006912:39219-39238 Msa1344870:CDS 55.0%
CTGGATGTTTCGCGGTTCAC+GGG + tig0006912:39220-39239 Msa1344870:CDS 55.0%
CGGGAAAGACTTACCAGACC+CGG + tig0006912:39239-39258 Msa1344870:CDS 55.0%
AGACTTACCAGACCCGGTTC+AGG + tig0006912:39245-39264 Msa1344870:CDS 55.0%
TTTCGATCCTGAACCGGGTC+TGG - tig0006912:39255-39274 None:intergenic 55.0%
CGTCGTTTCGATCCTGAACC+GGG - tig0006912:39260-39279 None:intergenic 55.0%
!! GAACCACCGGTTTATCCGGT+TGG + tig0006912:39393-39412 Msa1344870:CDS 55.0%
GTGCTTGTGGGGCCCAATAT+GGG - tig0006912:39728-39747 None:intergenic 55.0%
TGTGCTTGTGGGGCCCAATA+TGG - tig0006912:39729-39748 None:intergenic 55.0%
!! GGATGATGAAGGTGATGGGG+AGG - tig0006912:38816-38835 None:intergenic 55.0%
GTACTCACCTCCCTACCTCA+TGG + tig0006912:38871-38890 Msa1344870:CDS 55.0%
GGAAATGCCATGAGGTAGGG+AGG - tig0006912:38881-38900 None:intergenic 55.0%
CGTGGGAAATGCCATGAGGT+AGG - tig0006912:38885-38904 None:intergenic 55.0%
!! TTTGGTGTTGGGTGGGAGGT+CGG - tig0006912:38932-38951 None:intergenic 55.0%
!! GGTTCAGGTTTGGTGTTGGG+TGG - tig0006912:38940-38959 None:intergenic 55.0%
AATGAGAGCGGAGAGACGGT+GGG - tig0006912:39031-39050 None:intergenic 55.0%
TAATGAGAGCGGAGAGACGG+TGG - tig0006912:39032-39051 None:intergenic 55.0%
!! CGAAGGCATCGGTGCCAAAT+AGG - tig0006912:39059-39078 None:intergenic 55.0%
TAGTTCAGCGGCCATGTCGA+AGG - tig0006912:39076-39095 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG - tig0006912:39204-39223 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG + tig0006912:39201-39220 Msa1344870:CDS 55.0%
CGTGAACCGCGAAACATCCA+GGG - tig0006912:39221-39240 None:intergenic 55.0%
CCTGGATGTTTCGCGGTTCA+CGG + tig0006912:39219-39238 Msa1344870:CDS 55.0%
CTGGATGTTTCGCGGTTCAC+GGG + tig0006912:39220-39239 Msa1344870:CDS 55.0%
CGGGAAAGACTTACCAGACC+CGG + tig0006912:39239-39258 Msa1344870:CDS 55.0%
AGACTTACCAGACCCGGTTC+AGG + tig0006912:39245-39264 Msa1344870:CDS 55.0%
TTTCGATCCTGAACCGGGTC+TGG - tig0006912:39255-39274 None:intergenic 55.0%
CGTCGTTTCGATCCTGAACC+GGG - tig0006912:39260-39279 None:intergenic 55.0%
!! GAACCACCGGTTTATCCGGT+TGG + tig0006912:39393-39412 Msa1344870:CDS 55.0%
GTGCTTGTGGGGCCCAATAT+GGG - tig0006912:39728-39747 None:intergenic 55.0%
TGTGCTTGTGGGGCCCAATA+TGG - tig0006912:39729-39748 None:intergenic 55.0%
AGGTAGGGAGGTGAGTACGG+TGG - tig0006912:38869-38888 None:intergenic 60.0%
TTCCCACGTCTTCCTCCCTC+CGG + tig0006912:38897-38916 Msa1344870:CDS 60.0%
!! CAGGTTTGGTGTTGGGTGGG+AGG - tig0006912:38936-38955 None:intergenic 60.0%
!! TGGCACCGATGCCTTCGACA+TGG + tig0006912:39062-39081 Msa1344870:CDS 60.0%
! AGCGGCCATGTCGAAGGCAT+CGG - tig0006912:39070-39089 None:intergenic 60.0%
CCGTGAACCGCGAAACATCC+AGG - tig0006912:39222-39241 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG - tig0006912:39399-39418 None:intergenic 60.0%
TGGTTGGATGAGCAGCCACG+TGG + tig0006912:39474-39493 Msa1344870:CDS 60.0%
AGGTAGGGAGGTGAGTACGG+TGG - tig0006912:38869-38888 None:intergenic 60.0%
TTCCCACGTCTTCCTCCCTC+CGG + tig0006912:38897-38916 Msa1344870:CDS 60.0%
!! CAGGTTTGGTGTTGGGTGGG+AGG - tig0006912:38936-38955 None:intergenic 60.0%
!! TGGCACCGATGCCTTCGACA+TGG + tig0006912:39062-39081 Msa1344870:CDS 60.0%
! AGCGGCCATGTCGAAGGCAT+CGG - tig0006912:39070-39089 None:intergenic 60.0%
CCGTGAACCGCGAAACATCC+AGG - tig0006912:39222-39241 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG - tig0006912:39399-39418 None:intergenic 60.0%
TGGTTGGATGAGCAGCCACG+TGG + tig0006912:39474-39493 Msa1344870:CDS 60.0%
GACCGGAGGGAGGAAGACGT+GGG - tig0006912:38902-38921 None:intergenic 65.0%
TGACCGGAGGGAGGAAGACG+TGG - tig0006912:38903-38922 None:intergenic 65.0%
GTTGGGTGGGAGGTCGGAGA+GGG - tig0006912:38926-38945 None:intergenic 65.0%
TGTTGGGTGGGAGGTCGGAG+AGG - tig0006912:38927-38946 None:intergenic 65.0%
GACCGGAGGGAGGAAGACGT+GGG - tig0006912:38902-38921 None:intergenic 65.0%
TGACCGGAGGGAGGAAGACG+TGG - tig0006912:38903-38922 None:intergenic 65.0%
GTTGGGTGGGAGGTCGGAGA+GGG - tig0006912:38926-38945 None:intergenic 65.0%
TGTTGGGTGGGAGGTCGGAG+AGG - tig0006912:38927-38946 None:intergenic 65.0%
GGTCGGAGAGGGTGACCGGA+GGG - tig0006912:38915-38934 None:intergenic 70.0%
AGGTCGGAGAGGGTGACCGG+AGG - tig0006912:38916-38935 None:intergenic 70.0%
GGGAGGTCGGAGAGGGTGAC+CGG - tig0006912:38919-38938 None:intergenic 70.0%
GGTCGGAGAGGGTGACCGGA+GGG - tig0006912:38915-38934 None:intergenic 70.0%
AGGTCGGAGAGGGTGACCGG+AGG - tig0006912:38916-38935 None:intergenic 70.0%
GGGAGGTCGGAGAGGGTGAC+CGG - tig0006912:38919-38938 None:intergenic 70.0%
CGGAGAGGGTGACCGGAGGG+AGG - tig0006912:38912-38931 None:intergenic 75.0%
CGGAGAGGGTGACCGGAGGG+AGG - tig0006912:38912-38931 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0006912 gene 38682 40121 38682 ID=Msa1344870;Name=Msa1344870
tig0006912 mRNA 38682 40121 38682 ID=Msa1344870-mRNA-1;Parent=Msa1344870;Name=Msa1344870-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|479
tig0006912 exon 38682 40121 38682 ID=Msa1344870-mRNA-1:exon:4742;Parent=Msa1344870-mRNA-1
tig0006912 CDS 38682 40121 38682 ID=Msa1344870-mRNA-1:cds;Parent=Msa1344870-mRNA-1
Gene Sequence

>Msa1344870

ATGGAATATCAACAACAATCCCTCACCACACCAAAACAAGAACTACCACCTCTAGTAGCCATGTTTCCAACTCCAGGAATGGGACATCTCATTCCAATGATCGAATTCGCCAAGAGACTCTCCAAACATAACCTCCCCATCACCTTCATCATCCCAAACGACGGTCCACCTTCAAAGGCTCAAACCACCGTACTCACCTCCCTACCTCATGGCATTTCCCACGTCTTCCTCCCTCCGGTCACCCTCTCCGACCTCCCACCCAACACCAAACCTGAACCACTCATGATAGCCACCATCCTTCGTTCTATCCCTTTTCTCCATCAAACCCTACTCTCTCTCAAGACTTCCCACCGTCTCTCCGCTCTCATTATCGACCTATTTGGCACCGATGCCTTCGACATGGCCGCTGAACTAGATATCCCTTCATATCTCTACTTCCCTTCCACTGCCAATAATTTGTCCTTTGCCTTTTATTTTCCCCAACTCGACCAAAAAGTTCAGGGCGAGTTTAGGGATATCCCTGAACCGCTTAACATCCCTGGATGTTTCGCGGTTCACGGGAAAGACTTACCAGACCCGGTTCAGGATCGAAACGACGAAGCCTACAAGTGTTTTCTCCACCAAATGACAAGATACAGGTTGGCTAAAGGAATAATAGAGAATAGTTTTTTTGAGCTTGAACCGGAGGCTATTACTTTTTTGCAAAAGAATGAACCACCGGTTTATCCGGTTGGACCGTTAGTGAATGAAGACTCTATTAATAATGGATCTGAATTTGATGTGTGTTTTCAATGGTTGGATGAGCAGCCACGTGGAAGTGTTATATTTGTGAATTTTGGTAGTGAGGGGATCCTTACTAGTGCTCAAACAGATGAAATTGCTTATGGGTTGGAAATGAGTGAACAGAGGTTCTTGTGGGTTTTAAGGTGTCCTAAGGATAAAGTTGAAAATGATTCTAATTTTATTGCTAATAGTAATGTTGACCCTTTTGAATTTTTACCAAATGGTTTTATAGAGAGGACTAAAGGGAGGGGTTTAGTGCTCCCATATTGGGCCCCACAAGCACAAGTTTTGAGCCATATCTCAATTGGAGGGTTTGTGAGTCATTGTGGTTGGAATTCAACTCTTGAGAGTGTGGTGAATGGCGTGCCTTTGATTGCATGGCCACTCTATGCTGAACAAAAGATGAATGCTGTTCTTTTGAGTGAAAAAGTTAAAGTGGCTATTAGACCAGAAGTTGGTGAAAATGGGTTGGTTCAAAGGGAAGAAATTGCAAGTATTGTGAAGAGATTAATGGTAGGAGAGGAAGAGCAGAAGATTCGTTATAGAATGAAGGATCTCAAAGATGCAGCTACTAATGCTCTAAAGGAAAATGGTTCTTCAACAAAGCAAATATGTGAATTGGCTCTCAAATGGAAAGGTGTGACAATACCAAATTGA

Protein sequence

>Msa1344870

MEYQQQSLTTPKQELPPLVAMFPTPGMGHLIPMIEFAKRLSKHNLPITFIIPNDGPPSKAQTTVLTSLPHGISHVFLPPVTLSDLPPNTKPEPLMIATILRSIPFLHQTLLSLKTSHRLSALIIDLFGTDAFDMAAELDIPSYLYFPSTANNLSFAFYFPQLDQKVQGEFRDIPEPLNIPGCFAVHGKDLPDPVQDRNDEAYKCFLHQMTRYRLAKGIIENSFFELEPEAITFLQKNEPPVYPVGPLVNEDSINNGSEFDVCFQWLDEQPRGSVIFVNFGSEGILTSAQTDEIAYGLEMSEQRFLWVLRCPKDKVENDSNFIANSNVDPFEFLPNGFIERTKGRGLVLPYWAPQAQVLSHISIGGFVSHCGWNSTLESVVNGVPLIAWPLYAEQKMNAVLLSEKVKVAIRPEVGENGLVQREEIASIVKRLMVGEEEQKIRYRMKDLKDAATNALKENGSSTKQICELALKWKGVTIPN*