Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463060 | XP_003600861.1 | 100.000 | 309 | 0 | 0 | 1 | 309 | 1 | 309 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463060 | sp|O24412|PSD7A_ARATH | 88.636 | 308 | 35 | 0 | 1 | 308 | 1 | 308 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463060 | G7JB60 | 100.000 | 309 | 0 | 0 | 1 | 309 | 1 | 309 | 0.0 | 627 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008670 | Msa0463060 | 0.818230 | 2.185190e-52 | -8.615850e-47 |
| Msa0017510 | Msa0463060 | 0.812653 | 3.805436e-51 | -8.615850e-47 |
| Msa0026430 | Msa0463060 | 0.814335 | 1.623833e-51 | -8.615850e-47 |
| Msa0026910 | Msa0463060 | 0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa0041960 | Msa0463060 | 0.836266 | 1.035198e-56 | -8.615850e-47 |
| Msa0043980 | Msa0463060 | 0.834196 | 3.446393e-56 | -8.615850e-47 |
| Msa0051630 | Msa0463060 | 0.812856 | 3.434509e-51 | -8.615850e-47 |
| Msa0051740 | Msa0463060 | 0.807055 | 6.093129e-50 | -8.615850e-47 |
| Msa0051750 | Msa0463060 | 0.820364 | 7.133710e-53 | -8.615850e-47 |
| Msa0054480 | Msa0463060 | 0.813595 | 2.363565e-51 | -8.615850e-47 |
| Msa0054820 | Msa0463060 | 0.815997 | 6.938723e-52 | -8.615850e-47 |
| Msa0068680 | Msa0463060 | 0.821558 | 3.788705e-53 | -8.615850e-47 |
| Msa0069330 | Msa0463060 | 0.818179 | 2.243073e-52 | -8.615850e-47 |
| Msa0076250 | Msa0463060 | 0.801937 | 7.112329e-49 | -8.615850e-47 |
| Msa0078650 | Msa0463060 | 0.815939 | 7.148431e-52 | -8.615850e-47 |
| Msa0090360 | Msa0463060 | 0.819752 | 9.849553e-53 | -8.615850e-47 |
| Msa0100160 | Msa0463060 | 0.811459 | 6.926752e-51 | -8.615850e-47 |
| Msa0101700 | Msa0463060 | 0.807507 | 4.886585e-50 | -8.615850e-47 |
| Msa0104550 | Msa0463060 | 0.815070 | 1.115920e-51 | -8.615850e-47 |
| Msa0112750 | Msa0463060 | 0.816084 | 6.636413e-52 | -8.615850e-47 |
| Msa0115560 | Msa0463060 | 0.814684 | 1.359454e-51 | -8.615850e-47 |
| Msa0116080 | Msa0463060 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0121380 | Msa0463060 | 0.800476 | 1.415939e-48 | -8.615850e-47 |
| Msa0122590 | Msa0463060 | 0.824132 | 9.526966e-54 | -8.615850e-47 |
| Msa0123300 | Msa0463060 | 0.837053 | 6.522394e-57 | -8.615850e-47 |
| Msa0124280 | Msa0463060 | 0.813044 | 3.123012e-51 | -8.615850e-47 |
| Msa0126370 | Msa0463060 | 0.816045 | 6.770080e-52 | -8.615850e-47 |
| Msa0137840 | Msa0463060 | 0.811285 | 7.555503e-51 | -8.615850e-47 |
| Msa0141620 | Msa0463060 | 0.800497 | 1.401985e-48 | -8.615850e-47 |
| Msa0143560 | Msa0463060 | 0.821112 | 4.801255e-53 | -8.615850e-47 |
| Msa0150570 | Msa0463060 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0157290 | Msa0463060 | 0.812204 | 4.768072e-51 | -8.615850e-47 |
| Msa0159930 | Msa0463060 | 0.805260 | 1.454680e-49 | -8.615850e-47 |
| Msa0166870 | Msa0463060 | 0.823880 | 1.091415e-53 | -8.615850e-47 |
| Msa0170570 | Msa0463060 | 0.832607 | 8.585406e-56 | -8.615850e-47 |
| Msa0171120 | Msa0463060 | 0.801431 | 9.031606e-49 | -8.615850e-47 |
| Msa0171290 | Msa0463060 | 0.812754 | 3.615792e-51 | -8.615850e-47 |
| Msa0183050 | Msa0463060 | 0.865877 | 4.293828e-65 | -8.615850e-47 |
| Msa0184040 | Msa0463060 | 0.812147 | 4.907390e-51 | -8.615850e-47 |
| Msa0197930 | Msa0463060 | 0.809603 | 1.744315e-50 | -8.615850e-47 |
| Msa0205840 | Msa0463060 | 0.805680 | 1.187659e-49 | -8.615850e-47 |
| Msa0205850 | Msa0463060 | 0.809802 | 1.580414e-50 | -8.615850e-47 |
| Msa0206010 | Msa0463060 | 0.805862 | 1.087386e-49 | -8.615850e-47 |
| Msa0212990 | Msa0463060 | 0.806609 | 7.569643e-50 | -8.615850e-47 |
| Msa0220440 | Msa0463060 | 0.804415 | 2.183633e-49 | -8.615850e-47 |
| Msa0222620 | Msa0463060 | 0.801636 | 8.202398e-49 | -8.615850e-47 |
| Msa0223080 | Msa0463060 | 0.819262 | 1.274009e-52 | -8.615850e-47 |
| Msa0224390 | Msa0463060 | 0.815529 | 8.825170e-52 | -8.615850e-47 |
| Msa0224420 | Msa0463060 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
| Msa0230610 | Msa0463060 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0371170 | Msa0463060 | 0.811675 | 6.217931e-51 | -8.615850e-47 |
| Msa0376350 | Msa0463060 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0378970 | Msa0463060 | 0.803336 | 3.660152e-49 | -8.615850e-47 |
| Msa0388960 | Msa0463060 | 0.823213 | 1.563688e-53 | -8.615850e-47 |
| Msa0395870 | Msa0463060 | 0.803773 | 2.970763e-49 | -8.615850e-47 |
| Msa0410650 | Msa0463060 | 0.800018 | 1.754302e-48 | -8.615850e-47 |
| Msa0417270 | Msa0463060 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0417880 | Msa0463060 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0424790 | Msa0463060 | 0.809773 | 1.603297e-50 | -8.615850e-47 |
| Msa0428580 | Msa0463060 | 0.808535 | 2.953140e-50 | -8.615850e-47 |
| Msa0428590 | Msa0463060 | 0.802715 | 4.919823e-49 | -8.615850e-47 |
| Msa0462390 | Msa0463060 | 0.810058 | 1.392359e-50 | -8.615850e-47 |
| Msa0462430 | Msa0463060 | 0.809779 | 1.598306e-50 | -8.615850e-47 |
| Msa0462480 | Msa0463060 | 0.805725 | 1.162049e-49 | -8.615850e-47 |
| Msa0463060 | Msa0464120 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0463060 | Msa0474940 | 0.808673 | 2.758646e-50 | -8.615850e-47 |
| Msa0463060 | Msa0479170 | 0.834090 | 3.663331e-56 | -8.615850e-47 |
| Msa0463060 | Msa0481530 | 0.836808 | 7.529959e-57 | -8.615850e-47 |
| Msa0463060 | Msa0484780 | 0.834332 | 3.186795e-56 | -8.615850e-47 |
| Msa0463060 | Msa0501460 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa0463060 | Msa0507680 | 0.806245 | 9.032868e-50 | -8.615850e-47 |
| Msa0463060 | Msa0512900 | 0.814629 | 1.397834e-51 | -8.615850e-47 |
| Msa0463060 | Msa0523460 | 0.814464 | 1.520009e-51 | -8.615850e-47 |
| Msa0463060 | Msa0529890 | 0.827506 | 1.506746e-54 | -8.615850e-47 |
| Msa0463060 | Msa0531180 | 0.832068 | 1.167297e-55 | -8.615850e-47 |
| Msa0463060 | Msa0532710 | 0.817823 | 2.699669e-52 | -8.615850e-47 |
| Msa0463060 | Msa0546500 | 0.814303 | 1.649956e-51 | -8.615850e-47 |
| Msa0463060 | Msa0546680 | 0.807635 | 4.591476e-50 | -8.615850e-47 |
| Msa0463060 | Msa0551890 | 0.830268 | 3.232362e-55 | -8.615850e-47 |
| Msa0463060 | Msa0557070 | 0.848393 | 6.307875e-60 | -8.615850e-47 |
| Msa0463060 | Msa0557320 | 0.863234 | 2.878547e-64 | -8.615850e-47 |
| Msa0463060 | Msa0561230 | 0.818173 | 2.250678e-52 | -8.615850e-47 |
| Msa0463060 | Msa0566310 | 0.821821 | 3.293257e-53 | -8.615850e-47 |
| Msa0463060 | Msa0571130 | 0.850201 | 1.978360e-60 | -8.615850e-47 |
| Msa0463060 | Msa0574390 | 0.825277 | 5.117853e-54 | -8.615850e-47 |
| Msa0463060 | Msa0574890 | 0.809061 | 2.279297e-50 | -8.615850e-47 |
| Msa0463060 | Msa0575470 | 0.809321 | 2.005016e-50 | -8.615850e-47 |
| Msa0463060 | Msa0577500 | 0.809007 | 2.341088e-50 | -8.615850e-47 |
| Msa0463060 | Msa0585560 | 0.833425 | 5.371457e-56 | -8.615850e-47 |
| Msa0463060 | Msa0600930 | 0.802506 | 5.432085e-49 | -8.615850e-47 |
| Msa0463060 | Msa0601750 | 0.801528 | 8.631059e-49 | -8.615850e-47 |
| Msa0463060 | Msa0607050 | 0.803824 | 2.899193e-49 | -8.615850e-47 |
| Msa0463060 | Msa0613090 | 0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa0463060 | Msa0615310 | 0.820485 | 6.691428e-53 | -8.615850e-47 |
| Msa0463060 | Msa0618970 | 0.804143 | 2.488289e-49 | -8.615850e-47 |
| Msa0463060 | Msa0620230 | 0.811745 | 6.003093e-51 | -8.615850e-47 |
| Msa0463060 | Msa0622650 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
| Msa0463060 | Msa0625720 | 0.829051 | 6.388672e-55 | -8.615850e-47 |
| Msa0463060 | Msa0627450 | 0.817499 | 3.194798e-52 | -8.615850e-47 |
| Msa0463060 | Msa0633060 | 0.813752 | 2.183594e-51 | -8.615850e-47 |
| Msa0463060 | Msa0641190 | 0.803896 | 2.801051e-49 | -8.615850e-47 |
| Msa0463060 | Msa0643080 | 0.808878 | 2.494569e-50 | -8.615850e-47 |
| Msa0463060 | Msa0644840 | 0.801368 | 9.306321e-49 | -8.615850e-47 |
| Msa0463060 | Msa0647980 | 0.826146 | 3.183980e-54 | -8.615850e-47 |
| Msa0463060 | Msa0652450 | 0.827153 | 1.830434e-54 | -8.615850e-47 |
| Msa0463060 | Msa0654720 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0463060 | Msa0655560 | 0.807425 | 5.087097e-50 | -8.615850e-47 |
| Msa0463060 | Msa0657750 | 0.834650 | 2.651750e-56 | -8.615850e-47 |
| Msa0463060 | Msa0657970 | 0.818887 | 1.550282e-52 | -8.615850e-47 |
| Msa0463060 | Msa0662240 | 0.819590 | 1.072348e-52 | -8.615850e-47 |
| Msa0463060 | Msa0663390 | 0.829769 | 4.275946e-55 | -8.615850e-47 |
| Msa0463060 | Msa0667050 | 0.834910 | 2.279936e-56 | -8.615850e-47 |
| Msa0463060 | Msa0676760 | 0.813304 | 2.739628e-51 | -8.615850e-47 |
| Msa0463060 | Msa0677410 | 0.802008 | 6.876942e-49 | -8.615850e-47 |
| Msa0463060 | Msa0682330 | 0.815730 | 7.959150e-52 | -8.615850e-47 |
| Msa0463060 | Msa0683510 | 0.817140 | 3.847599e-52 | -8.615850e-47 |
| Msa0463060 | Msa0684570 | 0.811570 | 6.553113e-51 | -8.615850e-47 |
| Msa0463060 | Msa0685750 | 0.807809 | 4.216041e-50 | -8.615850e-47 |
| Msa0463060 | Msa0686080 | 0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0463060 | Msa0687020 | 0.846035 | 2.796573e-59 | -8.615850e-47 |
| Msa0463060 | Msa0687840 | 0.805868 | 1.084275e-49 | -8.615850e-47 |
| Msa0463060 | Msa0690150 | 0.807134 | 5.863567e-50 | -8.615850e-47 |
| Msa0463060 | Msa0693380 | 0.800514 | 1.390521e-48 | -8.615850e-47 |
| Msa0463060 | Msa0698360 | 0.835545 | 1.576847e-56 | -8.615850e-47 |
| Msa0463060 | Msa0702830 | 0.807292 | 5.428686e-50 | -8.615850e-47 |
| Msa0463060 | Msa0704600 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa0463060 | Msa0715470 | 0.803835 | 2.884132e-49 | -8.615850e-47 |
| Msa0463060 | Msa0717890 | 0.822335 | 2.503328e-53 | -8.615850e-47 |
| Msa0463060 | Msa0740510 | 0.807519 | 4.858240e-50 | -8.615850e-47 |
| Msa0463060 | Msa0746540 | 0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0463060 | Msa0750880 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa0463060 | Msa0756540 | 0.820459 | 6.782010e-53 | -8.615850e-47 |
| Msa0463060 | Msa0762970 | 0.802783 | 4.761514e-49 | -8.615850e-47 |
| Msa0463060 | Msa0766580 | 0.820102 | 8.191089e-53 | -8.615850e-47 |
| Msa0463060 | Msa0778520 | 0.812097 | 5.032901e-51 | -8.615850e-47 |
| Msa0463060 | Msa0794730 | 0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0463060 | Msa0820770 | 0.801674 | 8.054897e-49 | -8.615850e-47 |
| Msa0463060 | Msa0828920 | 0.818846 | 1.583846e-52 | -8.615850e-47 |
| Msa0463060 | Msa0861090 | 0.801066 | 1.073104e-48 | -8.615850e-47 |
| Msa0463060 | Msa0868440 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
| Msa0463060 | Msa0869100 | 0.824258 | 8.898251e-54 | -8.615850e-47 |
| Msa0463060 | Msa0872440 | 0.813969 | 1.955353e-51 | -8.615850e-47 |
| Msa0463060 | Msa0878510 | 0.806429 | 8.261759e-50 | -8.615850e-47 |
| Msa0463060 | Msa0880140 | 0.810845 | 9.414710e-51 | -8.615850e-47 |
| Msa0463060 | Msa0896750 | 0.838850 | 2.251166e-57 | -8.615850e-47 |
| Msa0463060 | Msa0902760 | 0.811753 | 5.978411e-51 | -8.615850e-47 |
| Msa0463060 | Msa0905730 | 0.810152 | 1.328518e-50 | -8.615850e-47 |
| Msa0463060 | Msa0909770 | 0.818231 | 2.183105e-52 | -8.615850e-47 |
| Msa0463060 | Msa0924470 | 0.850174 | 2.013703e-60 | -8.615850e-47 |
| Msa0463060 | Msa0926470 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
| Msa0463060 | Msa0929710 | -0.803884 | 2.817393e-49 | -8.615850e-47 |
| Msa0463060 | Msa0933230 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0463060 | Msa0933310 | 0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0463060 | Msa0941190 | 0.841677 | 4.111252e-58 | -8.615850e-47 |
| Msa0463060 | Msa0954920 | 0.802991 | 4.312934e-49 | -8.615850e-47 |
| Msa0463060 | Msa0963270 | 0.802788 | 4.751046e-49 | -8.615850e-47 |
| Msa0463060 | Msa0966400 | 0.807630 | 4.602948e-50 | -8.615850e-47 |
| Msa0463060 | Msa0971090 | 0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0463060 | Msa0999100 | 0.825571 | 4.358768e-54 | -8.615850e-47 |
| Msa0463060 | Msa1003750 | 0.801267 | 9.758580e-49 | -8.615850e-47 |
| Msa0463060 | Msa1004840 | 0.804885 | 1.742641e-49 | -8.615850e-47 |
| Msa0463060 | Msa1005990 | 0.806410 | 8.337886e-50 | -8.615850e-47 |
| Msa0463060 | Msa1010350 | 0.800414 | 1.457557e-48 | -8.615850e-47 |
| Msa0463060 | Msa1013400 | 0.811350 | 7.314395e-51 | -8.615850e-47 |
| Msa0463060 | Msa1023920 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
| Msa0463060 | Msa1036410 | 0.816367 | 5.734880e-52 | -8.615850e-47 |
| Msa0463060 | Msa1041670 | 0.821075 | 4.895181e-53 | -8.615850e-47 |
| Msa0463060 | Msa1050340 | 0.817926 | 2.559325e-52 | -8.615850e-47 |
| Msa0463060 | Msa1075540 | 0.809180 | 2.149527e-50 | -8.615850e-47 |
| Msa0463060 | Msa1078170 | 0.840858 | 6.748443e-58 | -8.615850e-47 |
| Msa0463060 | Msa1081330 | 0.820007 | 8.609179e-53 | -8.615850e-47 |
| Msa0463060 | Msa1082500 | 0.838148 | 3.415545e-57 | -8.615850e-47 |
| Msa0463060 | Msa1085260 | 0.847521 | 1.097370e-59 | -8.615850e-47 |
| Msa0463060 | Msa1087980 | 0.813541 | 2.429273e-51 | -8.615850e-47 |
| Msa0463060 | Msa1093530 | 0.812892 | 3.372815e-51 | -8.615850e-47 |
| Msa0463060 | Msa1098400 | 0.861792 | 7.999490e-64 | -8.615850e-47 |
| Msa0463060 | Msa1098420 | 0.835045 | 2.108370e-56 | -8.615850e-47 |
| Msa0463060 | Msa1100050 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0463060 | Msa1106510 | 0.805249 | 1.462195e-49 | -8.615850e-47 |
| Msa0463060 | Msa1107900 | 0.802081 | 6.643201e-49 | -8.615850e-47 |
| Msa0463060 | Msa1123380 | 0.810180 | 1.310108e-50 | -8.615850e-47 |
| Msa0463060 | Msa1140690 | 0.816586 | 5.122888e-52 | -8.615850e-47 |
| Msa0463060 | Msa1142020 | 0.821431 | 4.053452e-53 | -8.615850e-47 |
| Msa0463060 | Msa1144390 | 0.802267 | 6.085364e-49 | -8.615850e-47 |
| Msa0463060 | Msa1147900 | 0.806953 | 6.402484e-50 | -8.615850e-47 |
| Msa0463060 | Msa1151910 | 0.836098 | 1.141767e-56 | -8.615850e-47 |
| Msa0463060 | Msa1152990 | 0.800061 | 1.719535e-48 | -8.615850e-47 |
| Msa0463060 | Msa1165520 | 0.800035 | 1.740399e-48 | -8.615850e-47 |
| Msa0463060 | Msa1165740 | 0.800579 | 1.349033e-48 | -8.615850e-47 |
| Msa0463060 | Msa1166560 | 0.819269 | 1.268970e-52 | -8.615850e-47 |
| Msa0463060 | Msa1172670 | 0.841403 | 4.854248e-58 | -8.615850e-47 |
| Msa0463060 | Msa1193290 | 0.827839 | 1.253146e-54 | -8.615850e-47 |
| Msa0463060 | Msa1199570 | 0.833306 | 5.753345e-56 | -8.615850e-47 |
| Msa0463060 | Msa1201560 | 0.813393 | 2.618463e-51 | -8.615850e-47 |
| Msa0463060 | Msa1204530 | 0.815216 | 1.035588e-51 | -8.615850e-47 |
| Msa0463060 | Msa1207220 | 0.804133 | 2.500332e-49 | -8.615850e-47 |
| Msa0463060 | Msa1212940 | 0.818098 | 2.340324e-52 | -8.615850e-47 |
| Msa0463060 | Msa1214890 | 0.806366 | 8.518220e-50 | -8.615850e-47 |
| Msa0463060 | Msa1218600 | 0.824264 | 8.867981e-54 | -8.615850e-47 |
| Msa0463060 | Msa1221050 | 0.829207 | 5.857444e-55 | -8.615850e-47 |
| Msa0463060 | Msa1221060 | 0.809816 | 1.569508e-50 | -8.615850e-47 |
| Msa0463060 | Msa1224480 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0463060 | Msa1250530 | 0.802983 | 4.329769e-49 | -8.615850e-47 |
| Msa0463060 | Msa1251160 | 0.813916 | 2.008420e-51 | -8.615850e-47 |
| Msa0463060 | Msa1287440 | 0.802898 | 4.509855e-49 | -8.615850e-47 |
| Msa0463060 | Msa1294480 | 0.810589 | 1.069238e-50 | -8.615850e-47 |
| Msa0463060 | Msa1297290 | 0.837206 | 5.958294e-57 | -8.615850e-47 |
| Msa0463060 | Msa1300490 | 0.811621 | 6.389917e-51 | -8.615850e-47 |
| Msa0463060 | Msa1303240 | 0.810393 | 1.178467e-50 | -8.615850e-47 |
| Msa0463060 | Msa1303250 | 0.829837 | 4.117196e-55 | -8.615850e-47 |
| Msa0463060 | Msa1305340 | 0.807744 | 4.351585e-50 | -8.615850e-47 |
| Msa0463060 | Msa1305710 | 0.826429 | 2.726408e-54 | -8.615850e-47 |
| Msa0463060 | Msa1306840 | 0.806158 | 9.422528e-50 | -8.615850e-47 |
| Msa0463060 | Msa1313150 | 0.824844 | 6.474590e-54 | -8.615850e-47 |
| Msa0463060 | Msa1314340 | 0.814841 | 1.254614e-51 | -8.615850e-47 |
| Msa0463060 | Msa1328710 | 0.832865 | 7.406452e-56 | -8.615850e-47 |
| Msa0463060 | Msa1331000 | 0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa0463060 | Msa1331320 | 0.805243 | 1.466836e-49 | -8.615850e-47 |
| Msa0463060 | Msa1331910 | 0.802614 | 5.160120e-49 | -8.615850e-47 |
| Msa0463060 | Msa1340810 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa0463060 | Msa1353470 | 0.805777 | 1.133315e-49 | -8.615850e-47 |
| Msa0463060 | Msa1356510 | 0.816967 | 4.208646e-52 | -8.615850e-47 |
| Msa0463060 | Msa1356610 | 0.811866 | 5.650118e-51 | -8.615850e-47 |
| Msa0463060 | Msa1361400 | 0.808798 | 2.593921e-50 | -8.615850e-47 |
| Msa0463060 | Msa1361410 | 0.815769 | 7.799808e-52 | -8.615850e-47 |
| Msa0463060 | Msa1366600 | 0.810764 | 9.798853e-51 | -8.615850e-47 |
| Msa0463060 | Msa1374470 | 0.802641 | 5.095703e-49 | -8.615850e-47 |
| Msa0463060 | Msa1385000 | 0.836720 | 7.930081e-57 | -8.615850e-47 |
| Msa0463060 | Msa1392880 | 0.809517 | 1.819509e-50 | -8.615850e-47 |
| Msa0463060 | Msa1397120 | 0.805681 | 1.187251e-49 | -8.615850e-47 |
| Msa0463060 | Msa1400870 | -0.803482 | 3.413713e-49 | -8.615850e-47 |
| Msa0463060 | Msa1402400 | 0.809137 | 2.195505e-50 | -8.615850e-47 |
| Msa0463060 | Msa1407580 | 0.811666 | 6.246485e-51 | -8.615850e-47 |
| Msa0463060 | Msa1409870 | 0.804717 | 1.888801e-49 | -8.615850e-47 |
| Msa0463060 | Msa1410470 | 0.810952 | 8.925111e-51 | -8.615850e-47 |
| Msa0463060 | Msa1423880 | 0.818320 | 2.085050e-52 | -8.615850e-47 |
| Msa0463060 | Msa1424750 | 0.801716 | 7.898278e-49 | -8.615850e-47 |
| Msa0463060 | Msa1433390 | 0.814977 | 1.170351e-51 | -8.615850e-47 |
| Msa0463060 | Msa1446820 | 0.817468 | 3.246400e-52 | -8.615850e-47 |
| Msa0463060 | Msa1449520 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0463060 | Msa1451160 | 0.828096 | 1.086739e-54 | -8.615850e-47 |
| Msa0463060 | Msa1452120 | 0.810859 | 9.345182e-51 | -8.615850e-47 |
| Msa0463060 | Msa1466920 | 0.805126 | 1.551315e-49 | -8.615850e-47 |
| Msa0239480 | Msa0463060 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0243100 | Msa0463060 | 0.813834 | 2.094236e-51 | -8.615850e-47 |
| Msa0244860 | Msa0463060 | 0.802852 | 4.607734e-49 | -8.615850e-47 |
| Msa0244940 | Msa0463060 | 0.809081 | 2.257361e-50 | -8.615850e-47 |
| Msa0245940 | Msa0463060 | 0.837015 | 6.669005e-57 | -8.615850e-47 |
| Msa0248970 | Msa0463060 | 0.837118 | 6.277082e-57 | -8.615850e-47 |
| Msa0249200 | Msa0463060 | 0.815551 | 8.724742e-52 | -8.615850e-47 |
| Msa0250880 | Msa0463060 | 0.823610 | 1.262854e-53 | -8.615850e-47 |
| Msa0254790 | Msa0463060 | 0.820183 | 7.848465e-53 | -8.615850e-47 |
| Msa0259500 | Msa0463060 | 0.802676 | 5.011636e-49 | -8.615850e-47 |
| Msa0260780 | Msa0463060 | 0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0264150 | Msa0463060 | 0.807396 | 5.158479e-50 | -8.615850e-47 |
| Msa0276920 | Msa0463060 | 0.806995 | 6.273989e-50 | -8.615850e-47 |
| Msa0277180 | Msa0463060 | 0.818167 | 2.257295e-52 | -8.615850e-47 |
| Msa0283450 | Msa0463060 | 0.801522 | 8.652167e-49 | -8.615850e-47 |
| Msa0283520 | Msa0463060 | 0.803073 | 4.149000e-49 | -8.615850e-47 |
| Msa0284520 | Msa0463060 | 0.803725 | 3.039514e-49 | -8.615850e-47 |
| Msa0287410 | Msa0463060 | 0.837370 | 5.409389e-57 | -8.615850e-47 |
| Msa0287650 | Msa0463060 | 0.824590 | 7.431809e-54 | -8.615850e-47 |
| Msa0287740 | Msa0463060 | 0.803337 | 3.657547e-49 | -8.615850e-47 |
| Msa0302160 | Msa0463060 | 0.821531 | 3.842385e-53 | -8.615850e-47 |
| Msa0302170 | Msa0463060 | 0.803218 | 3.871226e-49 | -8.615850e-47 |
| Msa0305700 | Msa0463060 | 0.841031 | 6.079108e-58 | -8.615850e-47 |
| Msa0307860 | Msa0463060 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa0309770 | Msa0463060 | 0.804517 | 2.079605e-49 | -8.615850e-47 |
| Msa0311700 | Msa0463060 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa0311720 | Msa0463060 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0316810 | Msa0463060 | 0.812913 | 3.337704e-51 | -8.615850e-47 |
| Msa0321960 | Msa0463060 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa0326110 | Msa0463060 | 0.811224 | 7.792058e-51 | -8.615850e-47 |
| Msa0329320 | Msa0463060 | 0.821517 | 3.870803e-53 | -8.615850e-47 |
| Msa0330340 | Msa0463060 | 0.815831 | 7.557432e-52 | -8.615850e-47 |
| Msa0332000 | Msa0463060 | 0.807653 | 4.550668e-50 | -8.615850e-47 |
| Msa0333920 | Msa0463060 | 0.801315 | 9.542774e-49 | -8.615850e-47 |
| Msa0333930 | Msa0463060 | 0.806176 | 9.338640e-50 | -8.615850e-47 |
| Msa0339250 | Msa0463060 | 0.801704 | 7.943074e-49 | -8.615850e-47 |
| Msa0339490 | Msa0463060 | 0.822391 | 2.428607e-53 | -8.615850e-47 |
| Msa0341540 | Msa0463060 | 0.815450 | 9.190225e-52 | -8.615850e-47 |
| Msa0351380 | Msa0463060 | 0.802398 | 5.718914e-49 | -8.615850e-47 |
| Msa0357020 | Msa0463060 | 0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0359030 | Msa0463060 | 0.811721 | 6.077392e-51 | -8.615850e-47 |
| Msa0360210 | Msa0463060 | 0.800777 | 1.229382e-48 | -8.615850e-47 |
| Msa0363400 | Msa0463060 | 0.804167 | 2.459920e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463060 | MtrunA17_Chr3g0113191 | 100.000 | 309 | 0 | 0 | 1 | 309 | 1 | 309 | 0.0 | 627 |
| Msa0463060 | MtrunA17_Chr5g0436641 | 94.822 | 309 | 16 | 0 | 1 | 309 | 1 | 309 | 0.0 | 598 |
| Msa0463060 | MtrunA17_Chr3g0113201 | 33.210 | 271 | 164 | 6 | 19 | 285 | 25 | 282 | 3.68e-35 | 129 |
| Msa0463060 | MtrunA17_Chr5g0436671 | 31.206 | 282 | 177 | 6 | 8 | 285 | 10 | 278 | 1.70e-31 | 119 |
| Msa0463060 | MtrunA17_Chr3g0079641 | 25.574 | 305 | 189 | 6 | 10 | 285 | 4 | 299 | 7.38e-23 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463060 | AT5G05780.1 | 88.636 | 308 | 35 | 0 | 1 | 308 | 1 | 308 | 0.0 | 569 |
| Msa0463060 | AT3G11270.1 | 88.852 | 305 | 34 | 0 | 1 | 305 | 1 | 305 | 0.0 | 565 |
| Msa0463060 | AT5G05780.2 | 87.662 | 308 | 35 | 1 | 1 | 308 | 1 | 305 | 0.0 | 558 |
| Msa0463060 | AT3G11270.2 | 87.869 | 305 | 34 | 1 | 1 | 305 | 1 | 302 | 0.0 | 553 |
| Msa0463060 | AT2G39990.1 | 28.807 | 243 | 156 | 6 | 10 | 248 | 21 | 250 | 8.19e-26 | 104 |
| Msa0463060 | AT4G26430.1 | 24.606 | 317 | 200 | 7 | 10 | 296 | 4 | 311 | 7.77e-22 | 94.0 |
| Msa0463060 | AT5G56280.1 | 23.885 | 314 | 200 | 7 | 10 | 295 | 4 | 306 | 9.22e-21 | 90.9 |
Find 98 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATAGGATCTCATGGTTTA+AGG | 0.233509 | 3_3:+62315056 | None:intergenic |
| TCCATGTTTAAGAGAATAAA+TGG | 0.261453 | 3_3:-62316294 | Msa0463060:intron |
| AATACAGCGGTGACTGGTTT+TGG | 0.264033 | 3_3:-62319154 | Msa0463060:five_prime_UTR |
| ACCGACAAATGCAATTAAAA+TGG | 0.281333 | 3_3:+62314305 | None:intergenic |
| ATTATAACCAAAACAGGATT+TGG | 0.290995 | 3_3:+62315817 | None:intergenic |
| CTATGTTCCAAATCCTGTTT+TGG | 0.298755 | 3_3:-62315824 | Msa0463060:CDS |
| TACCTTGATCTTGTTATTGA+TGG | 0.301396 | 3_3:-62315087 | Msa0463060:CDS |
| AACACGCTTGCGAGTATCTT+TGG | 0.301893 | 3_3:+62318941 | None:intergenic |
| GCTGCACTTGGCACTGGTGC+TGG | 0.303651 | 3_3:+62314402 | None:intergenic |
| GCTCATGAAGTTGAGGAAAT+AGG | 0.335482 | 3_3:-62315534 | Msa0463060:intron |
| GCACATGCACAAAGACCTTT+TGG | 0.348447 | 3_3:+62315571 | None:intergenic |
| TGCAAGACTTAAAGAGATAA+GGG | 0.362774 | 3_3:-62315112 | Msa0463060:CDS |
| GTTGGAATTCCCAACTCCTT+AGG | 0.364240 | 3_3:+62315784 | None:intergenic |
| TAGATTTCTCTGTTCTTTCT+CGG | 0.370842 | 3_3:+62319082 | None:intergenic |
| TCTTGCATCCAAACCTTTCA+AGG | 0.370976 | 3_3:+62315128 | None:intergenic |
| CTCGGTTGCAAGGGTGCTAA+TGG | 0.375206 | 3_3:+62315339 | None:intergenic |
| ACATCAATTATAACCAAAAC+AGG | 0.387085 | 3_3:+62315811 | None:intergenic |
| TCTTCTTGAGCATTTCTGAT+AGG | 0.388018 | 3_3:-62314283 | Msa0463060:three_prime_UTR |
| ATCCGAACCAGCGTAGCTAT+TGG | 0.391771 | 3_3:+62318872 | None:intergenic |
| GATACTCGCAAGCGTGTTGT+CGG | 0.410026 | 3_3:-62318936 | Msa0463060:CDS |
| ACTCACAGCCTTGAAAGGTT+TGG | 0.412185 | 3_3:-62315136 | Msa0463060:CDS |
| ATGACAAGGATCCTAGCATT+TGG | 0.417257 | 3_3:-62316350 | Msa0463060:CDS |
| AGATCAGAGACATTGAGATT+TGG | 0.417947 | 3_3:+62314787 | None:intergenic |
| CAGGAGTGGAACACTTGCTT+AGG | 0.424438 | 3_3:-62315378 | Msa0463060:CDS |
| AGACATTGAGATTTGGTAGC+AGG | 0.443560 | 3_3:+62314794 | None:intergenic |
| GAAAATGACCTCGACATTCA+TGG | 0.450178 | 3_3:-62316147 | Msa0463060:CDS |
| GATGTTGAACCTAAGGAGTT+GGG | 0.454883 | 3_3:-62315793 | Msa0463060:CDS |
| TTGCTTGGTTCTACTTTCAA+AGG | 0.455683 | 3_3:-62318909 | Msa0463060:CDS |
| TGCACGGGAAATAGTGTAAA+CGG | 0.457033 | 3_3:+62314228 | None:intergenic |
| TGCAGCTGCATAAGGTTTCA+AGG | 0.459068 | 3_3:-62314385 | Msa0463060:exon |
| AACAAACAGATTAGGATCTC+AGG | 0.463231 | 3_3:-62314134 | Msa0463060:three_prime_UTR |
| TATGCAGCTGCACTTGGCAC+TGG | 0.465612 | 3_3:+62314396 | None:intergenic |
| GTGCCAAGTGCAGCTGCATA+AGG | 0.467700 | 3_3:-62314393 | Msa0463060:exon |
| TGATGTTGAACCTAAGGAGT+TGG | 0.470055 | 3_3:-62315794 | Msa0463060:CDS |
| ATGCAAGACTTAAAGAGATA+AGG | 0.470276 | 3_3:-62315113 | Msa0463060:CDS |
| TCCTTGTCATCTTCTTCAAA+GGG | 0.472348 | 3_3:+62316363 | None:intergenic |
| TATAGGATCTCATGGTTTAA+GGG | 0.477057 | 3_3:+62315057 | None:intergenic |
| CTTCTTGAGCATTTCTGATA+GGG | 0.479781 | 3_3:-62314282 | Msa0463060:three_prime_UTR |
| ATCCTTGTCATCTTCTTCAA+AGG | 0.483769 | 3_3:+62316362 | None:intergenic |
| TATAATTGATGTTGAACCTA+AGG | 0.485322 | 3_3:-62315800 | Msa0463060:CDS |
| AACAAACCTGCAGATGGTAT+AGG | 0.490745 | 3_3:+62315040 | None:intergenic |
| AAACCTTATGCAGCTGCACT+TGG | 0.496264 | 3_3:+62314390 | None:intergenic |
| GTGGTGGGGTGGTATAGCAC+TGG | 0.497402 | 3_3:-62316183 | Msa0463060:CDS |
| TGCAATGGGTTGAGCTCTGA+AGG | 0.506193 | 3_3:-62314360 | Msa0463060:three_prime_UTR |
| AAGGTTTCAAGGATTGCAAT+GGG | 0.509275 | 3_3:-62314374 | Msa0463060:three_prime_UTR |
| AAGCAAAATACAGCGGTGAC+TGG | 0.509604 | 3_3:-62319160 | Msa0463060:five_prime_UTR |
| TTCCATCAATAACAAGATCA+AGG | 0.509830 | 3_3:+62315085 | None:intergenic |
| CCTTGTTGTTGATCAAGTTG+TGG | 0.511469 | 3_3:+62314598 | None:intergenic |
| CAATGTCTCTGATCTTATCA+AGG | 0.514069 | 3_3:-62314779 | Msa0463060:CDS |
| TTGGTTAGTGGTGTTGCAGA+GGG | 0.518728 | 3_3:-62319135 | Msa0463060:five_prime_UTR |
| CAATTAAAATGGAAGAATCC+TGG | 0.520128 | 3_3:+62314316 | None:intergenic |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.520637 | 3_3:-62315749 | Msa0463060:intron |
| TGCTCAACAAAGAACATGAA+AGG | 0.527873 | 3_3:-62314440 | Msa0463060:CDS |
| AGGCACTATGATTGATTCCA+TGG | 0.528299 | 3_3:-62314340 | Msa0463060:three_prime_UTR |
| TAAGGTTTCAAGGATTGCAA+TGG | 0.534648 | 3_3:-62314375 | Msa0463060:three_prime_UTR |
| ACCATTTATTCTCTTAAACA+TGG | 0.539672 | 3_3:+62316293 | None:intergenic |
| ACATGGAAAACATTGCTTCG+TGG | 0.541873 | 3_3:+62316310 | None:intergenic |
| AATGGAAGAATCCTGGTCCA+TGG | 0.544348 | 3_3:+62314323 | None:intergenic |
| ACATTGCTTCGTGGTAATTG+TGG | 0.545602 | 3_3:+62316319 | None:intergenic |
| AAAATGACCTCGACATTCAT+GGG | 0.547978 | 3_3:-62316146 | Msa0463060:CDS |
| GGAAAACTCACAGCCTTGAA+AGG | 0.550042 | 3_3:-62315141 | Msa0463060:CDS |
| TGCTACTCAGAAAAGCCAAA+AGG | 0.554388 | 3_3:-62315586 | Msa0463060:CDS |
| GCTCAACAAAGAACATGAAA+GGG | 0.556354 | 3_3:-62314439 | Msa0463060:CDS |
| TTTGGTTAGTGGTGTTGCAG+AGG | 0.557549 | 3_3:-62319136 | Msa0463060:five_prime_UTR |
| TGAGATCCTATACCATCTGC+AGG | 0.565146 | 3_3:-62315046 | Msa0463060:intron |
| TACAGCAAAGGAGCATGTGG+TGG | 0.565219 | 3_3:-62316199 | Msa0463060:intron |
| GATGTTTCCAATAGCTACGC+TGG | 0.569599 | 3_3:-62318879 | Msa0463060:intron |
| ACAGCAAAGGAGCATGTGGT+GGG | 0.572446 | 3_3:-62316198 | Msa0463060:intron |
| TCATACAGAAATAAAGTGCA+CGG | 0.573147 | 3_3:+62314212 | None:intergenic |
| TGGTCGAGAAACCAAATGCT+AGG | 0.573926 | 3_3:+62316339 | None:intergenic |
| GCAGATGGTATAGGATCTCA+TGG | 0.574067 | 3_3:+62315049 | None:intergenic |
| AAAAGCATACTATGCTGTTG+AGG | 0.577045 | 3_3:-62315761 | Msa0463060:CDS |
| TTGTGAGTTGCAATTTGAGA+AGG | 0.578217 | 3_3:-62314028 | Msa0463060:three_prime_UTR |
| ACGTTCGATCGAGAAGGTGG+TGG | 0.579416 | 3_3:-62319012 | Msa0463060:CDS |
| ATCACGTTCGATCGAGAAGG+TGG | 0.579469 | 3_3:-62319015 | Msa0463060:CDS |
| TATGATTGATTCCATGGACC+AGG | 0.584227 | 3_3:-62314334 | Msa0463060:three_prime_UTR |
| GATTGCTGCTCATGAAGTTG+AGG | 0.594690 | 3_3:-62315541 | Msa0463060:CDS |
| ACACTTGCTTAGGGATGTGA+AGG | 0.595095 | 3_3:-62315368 | Msa0463060:CDS |
| CTCATCACGTTCGATCGAGA+AGG | 0.595224 | 3_3:-62319018 | Msa0463060:CDS |
| CATTAGCACCCTTGCAACCG+AGG | 0.598979 | 3_3:-62315338 | Msa0463060:intron |
| CAAAGGAGCATGTGGTGGGG+TGG | 0.599420 | 3_3:-62316194 | Msa0463060:CDS |
| ATGAGAAACAAACCTGCAGA+TGG | 0.599707 | 3_3:+62315034 | None:intergenic |
| CATACAGAAATAAAGTGCAC+GGG | 0.599815 | 3_3:+62314213 | None:intergenic |
| AGGAGTGGAACACTTGCTTA+GGG | 0.601795 | 3_3:-62315377 | Msa0463060:CDS |
| GAAAACGAATGATATGATGC+TGG | 0.610132 | 3_3:-62314661 | Msa0463060:CDS |
| AGCATACTATGCTGTTGAGG+AGG | 0.622035 | 3_3:-62315758 | Msa0463060:CDS |
| GTTTACAGCAAAGGAGCATG+TGG | 0.636788 | 3_3:-62316202 | Msa0463060:intron |
| TCTAAGCTTCGAATTCGCCA+TGG | 0.637825 | 3_3:-62319063 | Msa0463060:exon |
| TAAATAACCCATGAATGTCG+AGG | 0.645744 | 3_3:+62316139 | None:intergenic |
| CCACAACTTGATCAACAACA+AGG | 0.647771 | 3_3:-62314598 | Msa0463060:intron |
| ACCCTTTGAAGAAGATGACA+AGG | 0.648379 | 3_3:-62316364 | Msa0463060:CDS |
| GCAAGACTTAAAGAGATAAG+GGG | 0.649515 | 3_3:-62315111 | Msa0463060:CDS |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 3_3:+62314631 | None:intergenic |
| GTAGCTATTGGAAACATCAA+CGG | 0.667938 | 3_3:+62318884 | None:intergenic |
| ACGATGCTGAGCAACACTAG+AGG | 0.680391 | 3_3:+62318984 | None:intergenic |
| GTAGAGAAATACAAGTAACA+TGG | 0.685930 | 3_3:-62314260 | Msa0463060:three_prime_UTR |
| CAGCAAAGGAGCATGTGGTG+GGG | 0.698587 | 3_3:-62316197 | Msa0463060:CDS |
| ATGTTGTGTAGTTAGCAACG+AGG | 0.802938 | 3_3:-62313996 | Msa0463060:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTACTTCAAATATAATTT+TGG | - | chr3_3:62316645-62316664 | Msa0463060:intron | 10.0% |
| !!! | CTAAATTCAAAAATATTTTT+GGG | + | chr3_3:62317105-62317124 | None:intergenic | 10.0% |
| !!! | ACTAAATTCAAAAATATTTT+TGG | + | chr3_3:62317106-62317125 | None:intergenic | 10.0% |
| !!! | AAAAATATTTTTGAATTTAG+TGG | - | chr3_3:62317105-62317124 | Msa0463060:intron | 10.0% |
| !! | ATAAACTAAATAATGTAAAG+CGG | + | chr3_3:62314308-62314327 | None:intergenic | 15.0% |
| !! | TCATATAATTGTTTATGTAT+AGG | - | chr3_3:62314636-62314655 | Msa0463060:CDS | 15.0% |
| !! | TAAAAACTTAGTTAAATGAT+TGG | + | chr3_3:62315030-62315049 | None:intergenic | 15.0% |
| !! | TTAATAATAAATCACAACAA+AGG | + | chr3_3:62315215-62315234 | None:intergenic | 15.0% |
| !!! | CATTTTTCCAATTATAAATT+TGG | - | chr3_3:62315359-62315378 | Msa0463060:CDS | 15.0% |
| !! | TATGATTAAGAAATATAATC+AGG | - | chr3_3:62315405-62315424 | Msa0463060:intron | 15.0% |
| !!! | AATTATTTTACACATTCAAT+TGG | + | chr3_3:62316629-62316648 | None:intergenic | 15.0% |
| !!! | TTTAATTGTTTGTTTTTACT+TGG | - | chr3_3:62317669-62317688 | Msa0463060:intron | 15.0% |
| !! | TAGGATTCATTATTATATAT+AGG | - | chr3_3:62318626-62318645 | Msa0463060:intron | 15.0% |
| !! | AAAAATAAAGCAAAATACAG+CGG | - | chr3_3:62313969-62313988 | Msa0463060:three_prime_UTR | 20.0% |
| !! | TGTTATTAGCAATTTCTATT+AGG | - | chr3_3:62314494-62314513 | Msa0463060:intron | 20.0% |
| !! | TTACTAAATATTTACCCAAA+CGG | + | chr3_3:62314594-62314613 | None:intergenic | 20.0% |
| !! | AATATTTAGTAAGTGCTTAT+AGG | - | chr3_3:62314602-62314621 | Msa0463060:CDS | 20.0% |
| !!! | GTATAGGCTATTTTATTTTT+TGG | - | chr3_3:62314652-62314671 | Msa0463060:CDS | 20.0% |
| !! | ATCTGAACCAAATTTATAAT+TGG | + | chr3_3:62315369-62315388 | None:intergenic | 20.0% |
| !!! | ACTTGGCTTTTTTAAAAATT+TGG | + | chr3_3:62315613-62315632 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAATCCATTTAC+TGG | + | chr3_3:62315913-62315932 | None:intergenic | 20.0% |
| !! | ATGTACTTTCAAACTTATTA+AGG | + | chr3_3:62315995-62316014 | None:intergenic | 20.0% |
| !! | ACTAGACTAAAAAAAATGTA+AGG | + | chr3_3:62316197-62316216 | None:intergenic | 20.0% |
| !!! | AATTCAACTAAGTTTTATGT+TGG | + | chr3_3:62316319-62316338 | None:intergenic | 20.0% |
| !! | CAAATTAATAGAAGTCAAAA+CGG | + | chr3_3:62316513-62316532 | None:intergenic | 20.0% |
| !! | AAGTTTAATCATTCTATCAT+GGG | + | chr3_3:62317433-62317452 | None:intergenic | 20.0% |
| !! | ACTATATGGATAAAATCAAA+AGG | + | chr3_3:62317695-62317714 | None:intergenic | 20.0% |
| !! | GTAAAAGAGATTAATAAACA+AGG | + | chr3_3:62317849-62317868 | None:intergenic | 20.0% |
| !! | ATTACAACAAGAAATTAGAT+GGG | + | chr3_3:62318304-62318323 | None:intergenic | 20.0% |
| !! | AATTACAACAAGAAATTAGA+TGG | + | chr3_3:62318305-62318324 | None:intergenic | 20.0% |
| !!! | ATTTCTTGTTGTAATTTGTT+AGG | - | chr3_3:62318309-62318328 | Msa0463060:intron | 20.0% |
| !!! | GTGATTTGAGTTTTAATATT+TGG | - | chr3_3:62318659-62318678 | Msa0463060:intron | 20.0% |
| !!! | TTTTTATCAACAAACAGATT+AGG | - | chr3_3:62318994-62319013 | Msa0463060:CDS | 20.0% |
| !! | AAACGGCTTAATTTTTACAT+TGG | + | chr3_3:62314577-62314596 | None:intergenic | 25.0% |
| ! | AATGTAAAAATTAAGCCGTT+TGG | - | chr3_3:62314576-62314595 | Msa0463060:intron | 25.0% |
| ! | ATGTAAAAATTAAGCCGTTT+GGG | - | chr3_3:62314577-62314596 | Msa0463060:intron | 25.0% |
| ! | AGCTTATGAATACAACTTAT+AGG | + | chr3_3:62314830-62314849 | None:intergenic | 25.0% |
| !! | TCTTATTTGAACTTATCTAC+TGG | - | chr3_3:62314949-62314968 | Msa0463060:intron | 25.0% |
| ! | CTTATTTGAACTTATCTACT+GGG | - | chr3_3:62314950-62314969 | Msa0463060:intron | 25.0% |
| ! | ATCACACAAAGCTTATTTAA+TGG | + | chr3_3:62315055-62315074 | None:intergenic | 25.0% |
| ! | GAATATACTACTATACTACT+TGG | + | chr3_3:62315630-62315649 | None:intergenic | 25.0% |
| !! | TACTTGGCTTTCTAAAAATT+CGG | + | chr3_3:62315652-62315671 | None:intergenic | 25.0% |
| ! | TTTAACCTTCAAATATCATG+TGG | - | chr3_3:62315786-62315805 | Msa0463060:CDS | 25.0% |
| ! | AGGAGATAACCATTATAATT+AGG | - | chr3_3:62315880-62315899 | Msa0463060:intron | 25.0% |
| ! | GGAGATAACCATTATAATTA+GGG | - | chr3_3:62315881-62315900 | Msa0463060:intron | 25.0% |
| ! | GAGATAACCATTATAATTAG+GGG | - | chr3_3:62315882-62315901 | Msa0463060:intron | 25.0% |
| ! | AGATAACCATTATAATTAGG+GGG | - | chr3_3:62315883-62315902 | Msa0463060:intron | 25.0% |
| ! | GATCGTCTCTTAAAATAAAA+AGG | + | chr3_3:62315973-62315992 | None:intergenic | 25.0% |
| ! | TCCATGTTTAAGAGAATAAA+TGG | - | chr3_3:62316842-62316861 | Msa0463060:intron | 25.0% |
| ! | ACCATTTATTCTCTTAAACA+TGG | + | chr3_3:62316846-62316865 | None:intergenic | 25.0% |
| ! | TGTTTAGATCAGATATTCAA+TGG | + | chr3_3:62316908-62316927 | None:intergenic | 25.0% |
| ! | AATTTGCATAGATATTGATC+CGG | + | chr3_3:62317269-62317288 | None:intergenic | 25.0% |
| ! | ATTATAACCAAAACAGGATT+TGG | + | chr3_3:62317322-62317341 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+AGG | + | chr3_3:62317328-62317347 | None:intergenic | 25.0% |
| ! | TATAATTGATGTTGAACCTA+AGG | - | chr3_3:62317336-62317355 | Msa0463060:intron | 25.0% |
| ! | GAAGTTTAATCATTCTATCA+TGG | + | chr3_3:62317434-62317453 | None:intergenic | 25.0% |
| ! | GATTAAACTTCTACTTCTAT+TGG | - | chr3_3:62317443-62317462 | Msa0463060:intron | 25.0% |
| ! | AAAATGACTCTTCTGTATAT+TGG | - | chr3_3:62317476-62317495 | Msa0463060:intron | 25.0% |
| !! | TGCAGAAGTTTTACATTAAA+TGG | + | chr3_3:62317632-62317651 | None:intergenic | 25.0% |
| ! | CAAACAATTAAAATGAACCA+TGG | + | chr3_3:62317661-62317680 | None:intergenic | 25.0% |
| !! | TGATTTTATCCATATAGTTG+CGG | - | chr3_3:62317697-62317716 | Msa0463060:intron | 25.0% |
| ! | AGGATAAGAAGAATTCATAA+AGG | + | chr3_3:62317734-62317753 | None:intergenic | 25.0% |
| ! | AATAAACAAGGATCTGTTTA+AGG | + | chr3_3:62317837-62317856 | None:intergenic | 25.0% |
| ! | CATATTAAATACTAATCCCT+AGG | - | chr3_3:62318132-62318151 | Msa0463060:intron | 25.0% |
| ! | TTACAACAAGAAATTAGATG+GGG | + | chr3_3:62318303-62318322 | None:intergenic | 25.0% |
| !!! | TTACTGATATTTGCTGATTT+TGG | - | chr3_3:62318594-62318613 | Msa0463060:intron | 25.0% |
| !!! | TCCATTTTAATTGCATTTGT+CGG | - | chr3_3:62318830-62318849 | Msa0463060:intron | 25.0% |
| TAGATTTCTCTGTTCTTTCT+CGG | + | chr3_3:62314057-62314076 | None:intergenic | 30.0% | |
| CAAATCTCAAAACAAACCAT+TGG | + | chr3_3:62314350-62314369 | None:intergenic | 30.0% | |
| ACTTTCCCTTGCTAAAATTA+GGG | + | chr3_3:62314375-62314394 | None:intergenic | 30.0% | |
| TACTTTCCCTTGCTAAAATT+AGG | + | chr3_3:62314376-62314395 | None:intergenic | 30.0% | |
| GTGCATTACATACATAGAAT+AGG | + | chr3_3:62314472-62314491 | None:intergenic | 30.0% | |
| TTAGCAATTTCTATTAGGCA+TGG | - | chr3_3:62314499-62314518 | Msa0463060:intron | 30.0% | |
| AATCTGTCTTCAAGAATTCT+TGG | + | chr3_3:62315191-62315210 | None:intergenic | 30.0% | |
| AGGTTGTAGAATAAGCTAAT+CGG | - | chr3_3:62315425-62315444 | Msa0463060:intron | 30.0% | |
| TATCTCCACATGATATTTGA+AGG | + | chr3_3:62315794-62315813 | None:intergenic | 30.0% | |
| ! | AATCAATGTACGGGTATTTT+GGG | + | chr3_3:62315847-62315866 | None:intergenic | 30.0% |
| GTATTAAGGAATCAATGTAC+GGG | + | chr3_3:62315856-62315875 | None:intergenic | 30.0% | |
| GGTATTAAGGAATCAATGTA+CGG | + | chr3_3:62315857-62315876 | None:intergenic | 30.0% | |
| ! | ATTGATTCCTTAATACCATG+AGG | - | chr3_3:62315860-62315879 | Msa0463060:intron | 30.0% |
| TTATAATGGTTATCTCCTCA+TGG | + | chr3_3:62315878-62315897 | None:intergenic | 30.0% | |
| ! | AGGGAGTACATAATATGATA+TGG | - | chr3_3:62316039-62316058 | Msa0463060:intron | 30.0% |
| TTATAGAGGCGAATACATTA+AGG | + | chr3_3:62316078-62316097 | None:intergenic | 30.0% | |
| ATGTATTCGCCTCTATAATA+TGG | - | chr3_3:62316080-62316099 | Msa0463060:intron | 30.0% | |
| ACATATGGACCATATTATAG+AGG | + | chr3_3:62316092-62316111 | None:intergenic | 30.0% | |
| ATTGCAGAATAGCTAACATA+TGG | + | chr3_3:62316107-62316126 | None:intergenic | 30.0% | |
| AATTTCTATGAGACATCGTT+TGG | - | chr3_3:62316124-62316143 | Msa0463060:intron | 30.0% | |
| !!! | GATGACTGAAAGGTTTTATT+AGG | - | chr3_3:62316369-62316388 | Msa0463060:intron | 30.0% |
| TCAACAACCAACATAAAACT+TGG | - | chr3_3:62316395-62316414 | Msa0463060:intron | 30.0% | |
| !! | GATTCAACCAAGTTTTATGT+TGG | + | chr3_3:62316405-62316424 | None:intergenic | 30.0% |
| !! | AAGTGTTTTCTTAGCTTTTG+TGG | - | chr3_3:62316443-62316462 | Msa0463060:intron | 30.0% |
| ATTAATAGAAGTCAAAACGG+TGG | + | chr3_3:62316510-62316529 | None:intergenic | 30.0% | |
| AGATGATAGATAGAATCATC+TGG | + | chr3_3:62316672-62316691 | None:intergenic | 30.0% | |
| AGAGAATAAATGGTATGAGT+TGG | - | chr3_3:62316852-62316871 | Msa0463060:intron | 30.0% | |
| ACAAACATTGTTTACAGCAA+AGG | - | chr3_3:62316925-62316944 | Msa0463060:intron | 30.0% | |
| ! | ACATTTTCACTAGGGTATAA+GGG | + | chr3_3:62317147-62317166 | None:intergenic | 30.0% |
| ! | AACATTTTCACTAGGGTATA+AGG | + | chr3_3:62317148-62317167 | None:intergenic | 30.0% |
| ! | TCATGACAACATTTTCACTA+GGG | + | chr3_3:62317155-62317174 | None:intergenic | 30.0% |
| ! | ATCATGACAACATTTTCACT+AGG | + | chr3_3:62317156-62317175 | None:intergenic | 30.0% |
| GTGAAAATGTTGTCATGATT+TGG | - | chr3_3:62317157-62317176 | Msa0463060:intron | 30.0% | |
| !! | AAATGTTGTCATGATTTGGT+TGG | - | chr3_3:62317161-62317180 | Msa0463060:intron | 30.0% |
| AGACAATAATGCAAGTAAAG+AGG | + | chr3_3:62317228-62317247 | None:intergenic | 30.0% | |
| ATTTGCATAGATATTGATCC+GGG | + | chr3_3:62317268-62317287 | None:intergenic | 30.0% | |
| ! | AAACTTCTGCAATTTTTCCA+TGG | - | chr3_3:62317641-62317660 | Msa0463060:intron | 30.0% |
| AAGGTGAAAAAAAAGAACCT+CGG | + | chr3_3:62317818-62317837 | None:intergenic | 30.0% | |
| AACCACAAAAAAACATTGCA+GGG | + | chr3_3:62317915-62317934 | None:intergenic | 30.0% | |
| !!! | TACACTGTTGCTTTTTACAT+AGG | - | chr3_3:62317967-62317986 | Msa0463060:intron | 30.0% |
| ATGCAAGACTTAAAGAGATA+AGG | - | chr3_3:62318023-62318042 | Msa0463060:intron | 30.0% | |
| TGCAAGACTTAAAGAGATAA+GGG | - | chr3_3:62318024-62318043 | Msa0463060:intron | 30.0% | |
| !! | TACCTTGATCTTGTTATTGA+TGG | - | chr3_3:62318049-62318068 | Msa0463060:intron | 30.0% |
| TTCCATCAATAACAAGATCA+AGG | + | chr3_3:62318054-62318073 | None:intergenic | 30.0% | |
| TATAGGATCTCATGGTTTAA+GGG | + | chr3_3:62318082-62318101 | None:intergenic | 30.0% | |
| TAGATGGGGAAAAAACAATA+AGG | + | chr3_3:62318289-62318308 | None:intergenic | 30.0% | |
| ! | TTCGTTTTCACTACATATGT+AGG | + | chr3_3:62318464-62318483 | None:intergenic | 30.0% |
| TAATACTTTGCCCAAAATTC+AGG | + | chr3_3:62318577-62318596 | None:intergenic | 30.0% | |
| CAATTAAAATGGAAGAATCC+TGG | + | chr3_3:62318823-62318842 | None:intergenic | 30.0% | |
| ACCGACAAATGCAATTAAAA+TGG | + | chr3_3:62318834-62318853 | None:intergenic | 30.0% | |
| GTAGAGAAATACAAGTAACA+TGG | - | chr3_3:62318876-62318895 | Msa0463060:intron | 30.0% | |
| TCATACAGAAATAAAGTGCA+CGG | + | chr3_3:62318927-62318946 | None:intergenic | 30.0% | |
| ! | TTGCGTTTTTATCACATCCA+TGG | + | chr3_3:62314093-62314112 | None:intergenic | 35.0% |
| !! | TTGCTTGGTTCTACTTTCAA+AGG | - | chr3_3:62314227-62314246 | Msa0463060:three_prime_UTR | 35.0% |
| GTAGCTATTGGAAACATCAA+CGG | + | chr3_3:62314255-62314274 | None:intergenic | 35.0% | |
| TTTGTTTCACTCTATGCCAA+TGG | - | chr3_3:62314331-62314350 | Msa0463060:three_prime_UTR | 35.0% | |
| !! | TTTGTGCCCTAATTTTAGCA+AGG | - | chr3_3:62314366-62314385 | Msa0463060:three_prime_UTR | 35.0% |
| !! | TTGTGCCCTAATTTTAGCAA+GGG | - | chr3_3:62314367-62314386 | Msa0463060:three_prime_UTR | 35.0% |
| TTCTTAGGTGGAACAATTCT+TGG | + | chr3_3:62314751-62314770 | None:intergenic | 35.0% | |
| TGTTCCACCTAAGAATGTAT+AGG | - | chr3_3:62314756-62314775 | Msa0463060:intron | 35.0% | |
| GAAGTAGCCTATACATTCTT+AGG | + | chr3_3:62314766-62314785 | None:intergenic | 35.0% | |
| TTGTATTCATAAGCTCTCCT+GGG | - | chr3_3:62314835-62314854 | Msa0463060:intron | 35.0% | |
| ! | TTTTCAACCAAGGATCTGTT+TGG | + | chr3_3:62314909-62314928 | None:intergenic | 35.0% |
| TTGAAAACCCTAAGTCTGTT+TGG | - | chr3_3:62314922-62314941 | Msa0463060:intron | 35.0% | |
| AGACAATCCAAACAGACTTA+GGG | + | chr3_3:62314932-62314951 | None:intergenic | 35.0% | |
| AAGACAATCCAAACAGACTT+AGG | + | chr3_3:62314933-62314952 | None:intergenic | 35.0% | |
| ! | TAAGCTTTGTGTGATGTTGA+AGG | - | chr3_3:62315060-62315079 | Msa0463060:CDS | 35.0% |
| CTGTCATACACATTTAACGT+TGG | + | chr3_3:62315107-62315126 | None:intergenic | 35.0% | |
| ACAGTTCTTTGTGTTTGTGA+TGG | - | chr3_3:62315123-62315142 | Msa0463060:CDS | 35.0% | |
| TTTGTGTTTGTGATGGTTGA+AGG | - | chr3_3:62315130-62315149 | Msa0463060:CDS | 35.0% | |
| TATAGTATCCGACTATCAGT+AGG | - | chr3_3:62315251-62315270 | Msa0463060:intron | 35.0% | |
| TATGACACTACTTTCTCTGT+TGG | - | chr3_3:62315296-62315315 | Msa0463060:intron | 35.0% | |
| ATATCGTCACAACAAAGCAT+TGG | + | chr3_3:62315555-62315574 | None:intergenic | 35.0% | |
| TATGTGCCTTAACTTTAGCA+AGG | - | chr3_3:62315572-62315591 | Msa0463060:CDS | 35.0% | |
| !! | ACTTAGCCTTGCTAAAGTTA+AGG | + | chr3_3:62315581-62315600 | None:intergenic | 35.0% |
| AGCATTAGCACTATACTACT+TGG | + | chr3_3:62315668-62315687 | None:intergenic | 35.0% | |
| ! | AAAATCGGGTTTGTTCATTC+AGG | + | chr3_3:62315740-62315759 | None:intergenic | 35.0% |
| !!! | AACAAACCCGATTTTTGAGT+TGG | - | chr3_3:62315745-62315764 | Msa0463060:intron | 35.0% |
| !!! | ACAAACCCGATTTTTGAGTT+GGG | - | chr3_3:62315746-62315765 | Msa0463060:intron | 35.0% |
| ACTACTCCCAACTCAAAAAT+CGG | + | chr3_3:62315755-62315774 | None:intergenic | 35.0% | |
| ! | GAATCAATGTACGGGTATTT+TGG | + | chr3_3:62315848-62315867 | None:intergenic | 35.0% |
| GTTATCTCCTCATGGTATTA+AGG | + | chr3_3:62315870-62315889 | None:intergenic | 35.0% | |
| TTGCTTACAATTGAGTCTAG+AGG | - | chr3_3:62316019-62316038 | Msa0463060:intron | 35.0% | |
| TGCTTACAATTGAGTCTAGA+GGG | - | chr3_3:62316020-62316039 | Msa0463060:intron | 35.0% | |
| ATTCACCTAACACAACTCTT+TGG | + | chr3_3:62316232-62316251 | None:intergenic | 35.0% | |
| GATTGTTGAAGGATTGTGTT+AGG | - | chr3_3:62316283-62316302 | Msa0463060:intron | 35.0% | |
| GTTGAATCTCTATTCCAACT+TGG | - | chr3_3:62316417-62316436 | Msa0463060:intron | 35.0% | |
| AGAAAACACTTCAACCAAGT+TGG | + | chr3_3:62316434-62316453 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+GGG | + | chr3_3:62316776-62316795 | None:intergenic | 35.0% | |
| ATCCTTGTCATCTTCTTCAA+AGG | + | chr3_3:62316777-62316796 | None:intergenic | 35.0% | |
| AAAATGACCTCGACATTCAT+GGG | - | chr3_3:62316990-62317009 | Msa0463060:intron | 35.0% | |
| TAAATAACCCATGAATGTCG+AGG | + | chr3_3:62317000-62317019 | None:intergenic | 35.0% | |
| ! | CTATGTTCCAAATCCTGTTT+TGG | - | chr3_3:62317312-62317331 | Msa0463060:intron | 35.0% |
| ! | ACAGCATAGTATGCTTTTGT+TGG | + | chr3_3:62317373-62317392 | None:intergenic | 35.0% |
| ! | AAAAGCATACTATGCTGTTG+AGG | - | chr3_3:62317375-62317394 | Msa0463060:intron | 35.0% |
| TCATTCTATCATGGGTGTAA+GGG | + | chr3_3:62317425-62317444 | None:intergenic | 35.0% | |
| ATCATTCTATCATGGGTGTA+AGG | + | chr3_3:62317426-62317445 | None:intergenic | 35.0% | |
| ATGACTCTTCTGTATATTGG+TGG | - | chr3_3:62317479-62317498 | Msa0463060:intron | 35.0% | |
| GAAAATGTTCCGCAACTATA+TGG | + | chr3_3:62317709-62317728 | None:intergenic | 35.0% | |
| AATTCTTCTTATCCTTGTGC+AGG | - | chr3_3:62317739-62317758 | Msa0463060:intron | 35.0% | |
| !!! | TTCCCTGCAATGTTTTTTTG+TGG | - | chr3_3:62317910-62317929 | Msa0463060:intron | 35.0% |
| CAACCACAAAAAAACATTGC+AGG | + | chr3_3:62317916-62317935 | None:intergenic | 35.0% | |
| !!! | TTGCTTTTTACATAGGTGAG+CGG | - | chr3_3:62317974-62317993 | Msa0463060:intron | 35.0% |
| GCAAGACTTAAAGAGATAAG+GGG | - | chr3_3:62318025-62318044 | Msa0463060:intron | 35.0% | |
| GTATAGGATCTCATGGTTTA+AGG | + | chr3_3:62318083-62318102 | None:intergenic | 35.0% | |
| CTTCAAATTGTTCGTGAATG+TGG | - | chr3_3:62318155-62318174 | Msa0463060:intron | 35.0% | |
| TGTCAACCATGAGACATAAA+TGG | - | chr3_3:62318212-62318231 | Msa0463060:intron | 35.0% | |
| AACCATGAGACATAAATGGA+TGG | - | chr3_3:62318216-62318235 | Msa0463060:intron | 35.0% | |
| TTCCATCCATTTATGTCTCA+TGG | + | chr3_3:62318221-62318240 | None:intergenic | 35.0% | |
| AGATCAGAGACATTGAGATT+TGG | + | chr3_3:62318352-62318371 | None:intergenic | 35.0% | |
| CAATGTCTCTGATCTTATCA+AGG | - | chr3_3:62318357-62318376 | Msa0463060:intron | 35.0% | |
| GAAAACGAATGATATGATGC+TGG | - | chr3_3:62318475-62318494 | Msa0463060:intron | 35.0% | |
| ! | AGATTCACAGTCCTGAATTT+TGG | - | chr3_3:62318563-62318582 | Msa0463060:intron | 35.0% |
| ! | GATTCACAGTCCTGAATTTT+GGG | - | chr3_3:62318564-62318583 | Msa0463060:intron | 35.0% |
| !!! | CTGATTTTGGCTCTATATGT+AGG | - | chr3_3:62318607-62318626 | Msa0463060:intron | 35.0% |
| TGCTCAACAAAGAACATGAA+AGG | - | chr3_3:62318696-62318715 | Msa0463060:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr3_3:62318697-62318716 | Msa0463060:intron | 35.0% | |
| TAAGGTTTCAAGGATTGCAA+TGG | - | chr3_3:62318761-62318780 | Msa0463060:intron | 35.0% | |
| AAGGTTTCAAGGATTGCAAT+GGG | - | chr3_3:62318762-62318781 | Msa0463060:intron | 35.0% | |
| TCTTCTTGAGCATTTCTGAT+AGG | - | chr3_3:62318853-62318872 | Msa0463060:intron | 35.0% | |
| CTTCTTGAGCATTTCTGATA+GGG | - | chr3_3:62318854-62318873 | Msa0463060:intron | 35.0% | |
| CATACAGAAATAAAGTGCAC+GGG | + | chr3_3:62318926-62318945 | None:intergenic | 35.0% | |
| AACAAACAGATTAGGATCTC+AGG | - | chr3_3:62319002-62319021 | Msa0463060:CDS | 35.0% | |
| ! | ATCTAAAACTGTTGCTCGAT+AGG | + | chr3_3:62319068-62319087 | None:intergenic | 35.0% |
| TTGTGAGTTGCAATTTGAGA+AGG | - | chr3_3:62319108-62319127 | Msa0463060:five_prime_UTR | 35.0% | |
| GTAGCCTATACATTCTTAGG+TGG | + | chr3_3:62314763-62314782 | None:intergenic | 40.0% | |
| GTTGTATTCATAAGCTCTCC+TGG | - | chr3_3:62314834-62314853 | Msa0463060:intron | 40.0% | |
| AAAACTTGTGAGATTTGCCC+AGG | + | chr3_3:62314855-62314874 | None:intergenic | 40.0% | |
| AGACAATCCAAACAGATCCT+TGG | - | chr3_3:62314899-62314918 | Msa0463060:intron | 40.0% | |
| ! | AGACTTAGGGTTTTCAACCA+AGG | + | chr3_3:62314919-62314938 | None:intergenic | 40.0% |
| CCGTTATACCTACTGATAGT+CGG | + | chr3_3:62315262-62315281 | None:intergenic | 40.0% | |
| CCGACTATCAGTAGGTATAA+CGG | - | chr3_3:62315259-62315278 | Msa0463060:intron | 40.0% | |
| ! | TGTTGGTCTGTTTACTGAGT+TGG | - | chr3_3:62315313-62315332 | Msa0463060:intron | 40.0% |
| ACCTCGTCATCTTCTTCAAA+GGG | + | chr3_3:62315468-62315487 | None:intergenic | 40.0% | |
| CTACTCCCAACTCAAAAATC+GGG | + | chr3_3:62315754-62315773 | None:intergenic | 40.0% | |
| GGTCTACCCCCTAATTATAA+TGG | + | chr3_3:62315892-62315911 | None:intergenic | 40.0% | |
| GATGACCAAAGAGTTGTGTT+AGG | - | chr3_3:62316224-62316243 | Msa0463060:intron | 40.0% | |
| CAGTTCAGTGTGATTGTTGA+AGG | - | chr3_3:62316272-62316291 | Msa0463060:intron | 40.0% | |
| TAGACTGACTGATGACTGAA+AGG | - | chr3_3:62316359-62316378 | Msa0463060:CDS | 40.0% | |
| ! | TGTGACACTAGTTTCTCCAT+TGG | - | chr3_3:62316582-62316601 | Msa0463060:intron | 40.0% |
| ! | ACCCTTTGAAGAAGATGACA+AGG | - | chr3_3:62316772-62316791 | Msa0463060:intron | 40.0% |
| ATGACAAGGATCCTAGCATT+TGG | - | chr3_3:62316786-62316805 | Msa0463060:intron | 40.0% | |
| ACATTGCTTCGTGGTAATTG+TGG | + | chr3_3:62316820-62316839 | None:intergenic | 40.0% | |
| ACATGGAAAACATTGCTTCG+TGG | + | chr3_3:62316829-62316848 | None:intergenic | 40.0% | |
| !! | AGGTCATTTTCACGCAGTTT+TGG | + | chr3_3:62316980-62316999 | None:intergenic | 40.0% |
| GAAAATGACCTCGACATTCA+TGG | - | chr3_3:62316989-62317008 | Msa0463060:intron | 40.0% | |
| TTCATCTGTGCTTTGTATCC+CGG | - | chr3_3:62317247-62317266 | Msa0463060:intron | 40.0% | |
| TGATGTTGAACCTAAGGAGT+TGG | - | chr3_3:62317342-62317361 | Msa0463060:intron | 40.0% | |
| GATGTTGAACCTAAGGAGTT+GGG | - | chr3_3:62317343-62317362 | Msa0463060:intron | 40.0% | |
| ACTCTTCTGTATATTGGTGG+TGG | - | chr3_3:62317482-62317501 | Msa0463060:intron | 40.0% | |
| ! | CTCTTCTGTATATTGGTGGT+GGG | - | chr3_3:62317483-62317502 | Msa0463060:intron | 40.0% |
| TGCTACTCAGAAAAGCCAAA+AGG | - | chr3_3:62317550-62317569 | Msa0463060:intron | 40.0% | |
| GCTCATGAAGTTGAGGAAAT+AGG | - | chr3_3:62317602-62317621 | Msa0463060:intron | 40.0% | |
| AAAAAGAACCTCGGTTGCAA+GGG | + | chr3_3:62317809-62317828 | None:intergenic | 40.0% | |
| AAAAAAGAACCTCGGTTGCA+AGG | + | chr3_3:62317810-62317829 | None:intergenic | 40.0% | |
| TCTTGCATCCAAACCTTTCA+AGG | + | chr3_3:62318011-62318030 | None:intergenic | 40.0% | |
| AACAAACCTGCAGATGGTAT+AGG | + | chr3_3:62318099-62318118 | None:intergenic | 40.0% | |
| ATGAGAAACAAACCTGCAGA+TGG | + | chr3_3:62318105-62318124 | None:intergenic | 40.0% | |
| ! | CACGAACAATTTGAAGCCTA+GGG | + | chr3_3:62318151-62318170 | None:intergenic | 40.0% |
| ! | TCACGAACAATTTGAAGCCT+AGG | + | chr3_3:62318152-62318171 | None:intergenic | 40.0% |
| ATGGTTGACAATTAGAGGTG+GGG | + | chr3_3:62318202-62318221 | None:intergenic | 40.0% | |
| CATGGTTGACAATTAGAGGT+GGG | + | chr3_3:62318203-62318222 | None:intergenic | 40.0% | |
| TCATGGTTGACAATTAGAGG+TGG | + | chr3_3:62318204-62318223 | None:intergenic | 40.0% | |
| GTCTCATGGTTGACAATTAG+AGG | + | chr3_3:62318207-62318226 | None:intergenic | 40.0% | |
| ! | AGACATTGAGATTTGGTAGC+AGG | + | chr3_3:62318345-62318364 | None:intergenic | 40.0% |
| ! | GATCTTATCAAGGCTTTTGC+AGG | - | chr3_3:62318367-62318386 | Msa0463060:intron | 40.0% |
| CACTTCTAATGAGAGACGAT+AGG | + | chr3_3:62318508-62318527 | None:intergenic | 40.0% | |
| !! | CCTTGTTGTTGATCAAGTTG+TGG | + | chr3_3:62318541-62318560 | None:intergenic | 40.0% |
| CCACAACTTGATCAACAACA+AGG | - | chr3_3:62318538-62318557 | Msa0463060:intron | 40.0% | |
| ! | AGGCACTATGATTGATTCCA+TGG | - | chr3_3:62318796-62318815 | Msa0463060:intron | 40.0% |
| ! | TATGATTGATTCCATGGACC+AGG | - | chr3_3:62318802-62318821 | Msa0463060:intron | 40.0% |
| TGCACGGGAAATAGTGTAAA+CGG | + | chr3_3:62318911-62318930 | None:intergenic | 40.0% | |
| ATGTTGTGTAGTTAGCAACG+AGG | - | chr3_3:62319140-62319159 | Msa0463060:five_prime_UTR | 40.0% | |
| AAGCAAAATACAGCGGTGAC+TGG | - | chr3_3:62313976-62313995 | Msa0463060:three_prime_UTR | 45.0% | |
| !!! | AATACAGCGGTGACTGGTTT+TGG | - | chr3_3:62313982-62314001 | Msa0463060:three_prime_UTR | 45.0% |
| !! | TTTGGTTAGTGGTGTTGCAG+AGG | - | chr3_3:62314000-62314019 | Msa0463060:three_prime_UTR | 45.0% |
| !! | TTGGTTAGTGGTGTTGCAGA+GGG | - | chr3_3:62314001-62314020 | Msa0463060:three_prime_UTR | 45.0% |
| TCTAAGCTTCGAATTCGCCA+TGG | - | chr3_3:62314073-62314092 | Msa0463060:intron | 45.0% | |
| AACACGCTTGCGAGTATCTT+TGG | + | chr3_3:62314198-62314217 | None:intergenic | 45.0% | |
| GATGTTTCCAATAGCTACGC+TGG | - | chr3_3:62314257-62314276 | Msa0463060:three_prime_UTR | 45.0% | |
| ! | TTCCAATAGCTACGCTGGTT+CGG | - | chr3_3:62314262-62314281 | Msa0463060:three_prime_UTR | 45.0% |
| AGATGCTTCAAGCATGCTGA+AGG | - | chr3_3:62314531-62314550 | Msa0463060:intron | 45.0% | |
| AGCATGCTGAAGGTTGTGTT+AGG | - | chr3_3:62314541-62314560 | Msa0463060:intron | 45.0% | |
| GCATGCTGAAGGTTGTGTTA+GGG | - | chr3_3:62314542-62314561 | Msa0463060:intron | 45.0% | |
| CATGCTGAAGGTTGTGTTAG+GGG | - | chr3_3:62314543-62314562 | Msa0463060:intron | 45.0% | |
| ATGCTGAAGGTTGTGTTAGG+GGG | - | chr3_3:62314544-62314563 | Msa0463060:intron | 45.0% | |
| ATGACCGAACTCCGTATTAC+GGG | + | chr3_3:62314703-62314722 | None:intergenic | 45.0% | |
| CATGACCGAACTCCGTATTA+CGG | + | chr3_3:62314704-62314723 | None:intergenic | 45.0% | |
| GACCTCGTCATCTTCTTCAA+AGG | + | chr3_3:62315469-62315488 | None:intergenic | 45.0% | |
| ATGACGAGGTCTCTAGCATT+TGG | - | chr3_3:62315478-62315497 | Msa0463060:intron | 45.0% | |
| TTAGGGGGTAGACCAGTAAA+TGG | - | chr3_3:62315898-62315917 | Msa0463060:intron | 45.0% | |
| AGACATCGTTTGGCATGAGA+TGG | - | chr3_3:62316134-62316153 | Msa0463060:intron | 45.0% | |
| AGATGGCTCAAAGCATGACA+TGG | - | chr3_3:62316151-62316170 | Msa0463060:CDS | 45.0% | |
| CAACTCAGTGAACAGACCAA+TGG | + | chr3_3:62316601-62316620 | None:intergenic | 45.0% | |
| ! | CATTGGTCTGTTCACTGAGT+TGG | - | chr3_3:62316599-62316618 | Msa0463060:intron | 45.0% |
| TGGTCGAGAAACCAAATGCT+AGG | + | chr3_3:62316800-62316819 | None:intergenic | 45.0% | |
| ! | GTTTACAGCAAAGGAGCATG+TGG | - | chr3_3:62316934-62316953 | Msa0463060:intron | 45.0% |
| GTTGGAATTCCCAACTCCTT+AGG | + | chr3_3:62317355-62317374 | None:intergenic | 45.0% | |
| AGCATACTATGCTGTTGAGG+AGG | - | chr3_3:62317378-62317397 | Msa0463060:intron | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr3_3:62317387-62317406 | Msa0463060:intron | 45.0% | |
| TATCATGGGTGTAAGGGACT+TGG | + | chr3_3:62317419-62317438 | None:intergenic | 45.0% | |
| ! | GCACATGCACAAAGACCTTT+TGG | + | chr3_3:62317568-62317587 | None:intergenic | 45.0% |
| GATTGCTGCTCATGAAGTTG+AGG | - | chr3_3:62317595-62317614 | Msa0463060:intron | 45.0% | |
| TTCTTATCCTTGTGCAGGAG+TGG | - | chr3_3:62317744-62317763 | Msa0463060:intron | 45.0% | |
| AGGAGTGGAACACTTGCTTA+GGG | - | chr3_3:62317759-62317778 | Msa0463060:intron | 45.0% | |
| ACACTTGCTTAGGGATGTGA+AGG | - | chr3_3:62317768-62317787 | Msa0463060:intron | 45.0% | |
| GGAAAACTCACAGCCTTGAA+AGG | - | chr3_3:62317995-62318014 | Msa0463060:intron | 45.0% | |
| ACTCACAGCCTTGAAAGGTT+TGG | - | chr3_3:62318000-62318019 | Msa0463060:intron | 45.0% | |
| GCAGATGGTATAGGATCTCA+TGG | + | chr3_3:62318090-62318109 | None:intergenic | 45.0% | |
| TGAGATCCTATACCATCTGC+AGG | - | chr3_3:62318090-62318109 | Msa0463060:intron | 45.0% | |
| TGACAATTAGAGGTGGGGAT+CGG | + | chr3_3:62318197-62318216 | None:intergenic | 45.0% | |
| AAACCTTATGCAGCTGCACT+TGG | + | chr3_3:62318749-62318768 | None:intergenic | 45.0% | |
| TGCAGCTGCATAAGGTTTCA+AGG | - | chr3_3:62318751-62318770 | Msa0463060:intron | 45.0% | |
| AATGGAAGAATCCTGGTCCA+TGG | + | chr3_3:62318816-62318835 | None:intergenic | 45.0% | |
| AAAACTGTTGCTCGATAGGC+AGG | + | chr3_3:62319064-62319083 | None:intergenic | 45.0% | |
| !!! | CGGTGACTGGTTTTGGTTAG+TGG | - | chr3_3:62313989-62314008 | Msa0463060:three_prime_UTR | 50.0% |
| CTCATCACGTTCGATCGAGA+AGG | - | chr3_3:62314118-62314137 | Msa0463060:three_prime_UTR | 50.0% | |
| ATCACGTTCGATCGAGAAGG+TGG | - | chr3_3:62314121-62314140 | Msa0463060:three_prime_UTR | 50.0% | |
| ACGATGCTGAGCAACACTAG+AGG | + | chr3_3:62314155-62314174 | None:intergenic | 50.0% | |
| GATACTCGCAAGCGTGTTGT+CGG | - | chr3_3:62314200-62314219 | Msa0463060:three_prime_UTR | 50.0% | |
| !! | CGTGTTGTCGGTGTTTTGCT+TGG | - | chr3_3:62314212-62314231 | Msa0463060:three_prime_UTR | 50.0% |
| ATCCGAACCAGCGTAGCTAT+TGG | + | chr3_3:62314267-62314286 | None:intergenic | 50.0% | |
| GAGTTCGGTCATGACTCATG+AGG | - | chr3_3:62314711-62314730 | Msa0463060:intron | 50.0% | |
| TCGGTCATGACTCATGAGGT+AGG | - | chr3_3:62314715-62314734 | Msa0463060:intron | 50.0% | |
| ! | GCCCTTTGAAGAAGATGACG+AGG | - | chr3_3:62315464-62315483 | Msa0463060:intron | 50.0% |
| ! | TACAGCAAAGGAGCATGTGG+TGG | - | chr3_3:62316937-62316956 | Msa0463060:intron | 50.0% |
| ! | ACAGCAAAGGAGCATGTGGT+GGG | - | chr3_3:62316938-62316957 | Msa0463060:intron | 50.0% |
| AAGTGTTCCACTCCTGCACA+AGG | + | chr3_3:62317754-62317773 | None:intergenic | 50.0% | |
| CAGGAGTGGAACACTTGCTT+AGG | - | chr3_3:62317758-62317777 | Msa0463060:intron | 50.0% | |
| !! | TGCAATGGGTTGAGCTCTGA+AGG | - | chr3_3:62318776-62318795 | Msa0463060:intron | 50.0% |
| ACGTTCGATCGAGAAGGTGG+TGG | - | chr3_3:62314124-62314143 | Msa0463060:three_prime_UTR | 55.0% | |
| TGTTTACCCTCCCCTTCCCA+AGG | - | chr3_3:62314675-62314694 | Msa0463060:intron | 55.0% | |
| GTTTACCCTCCCCTTCCCAA+GGG | - | chr3_3:62314676-62314695 | Msa0463060:intron | 55.0% | |
| TTTACCCTCCCCTTCCCAAG+GGG | - | chr3_3:62314677-62314696 | Msa0463060:intron | 55.0% | |
| TATTACGGGCCCCTTGGGAA+GGG | + | chr3_3:62314689-62314708 | None:intergenic | 55.0% | |
| TTCCCAAGGGGCCCGTAATA+CGG | - | chr3_3:62314689-62314708 | Msa0463060:intron | 55.0% | |
| AGCATGACATGGCTCGTTCG+TGG | - | chr3_3:62316162-62316181 | Msa0463060:CDS | 55.0% | |
| ! | CAGCAAAGGAGCATGTGGTG+GGG | - | chr3_3:62316939-62316958 | Msa0463060:intron | 55.0% |
| !! | CTCGGTTGCAAGGGTGCTAA+TGG | + | chr3_3:62317800-62317819 | None:intergenic | 55.0% |
| CATTAGCACCCTTGCAACCG+AGG | - | chr3_3:62317798-62317817 | Msa0463060:intron | 55.0% | |
| TATGCAGCTGCACTTGGCAC+TGG | + | chr3_3:62318743-62318762 | None:intergenic | 55.0% | |
| GTGCCAAGTGCAGCTGCATA+AGG | - | chr3_3:62318743-62318762 | Msa0463060:intron | 55.0% | |
| ATTACGGGCCCCTTGGGAAG+GGG | + | chr3_3:62314688-62314707 | None:intergenic | 60.0% | |
| GTATTACGGGCCCCTTGGGA+AGG | + | chr3_3:62314690-62314709 | None:intergenic | 60.0% | |
| CTCCGTATTACGGGCCCCTT+GGG | + | chr3_3:62314694-62314713 | None:intergenic | 60.0% | |
| ACTCCGTATTACGGGCCCCT+TGG | + | chr3_3:62314695-62314714 | None:intergenic | 60.0% | |
| GGGGCCCGTAATACGGAGTT+CGG | - | chr3_3:62314696-62314715 | Msa0463060:intron | 60.0% | |
| ! | CAAAGGAGCATGTGGTGGGG+TGG | - | chr3_3:62316942-62316961 | Msa0463060:intron | 60.0% |
| ! | GTGGTGGGGTGGTATAGCAC+TGG | - | chr3_3:62316953-62316972 | Msa0463060:intron | 60.0% |
| !! | GCTGCACTTGGCACTGGTGC+TGG | + | chr3_3:62318737-62318756 | None:intergenic | 65.0% |
| CGGGCCCCTTGGGAAGGGGA+GGG | + | chr3_3:62314684-62314703 | None:intergenic | 75.0% | |
| ACGGGCCCCTTGGGAAGGGG+AGG | + | chr3_3:62314685-62314704 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 62313962 | 62319196 | 62313962 | ID=Msa0463060;Name=Msa0463060 |
| chr3_3 | mRNA | 62313962 | 62319196 | 62313962 | ID=Msa0463060-mRNA-1;Parent=Msa0463060;Name=Msa0463060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=130|1|1|1|0.9|0.81|11|412|309 |
| chr3_3 | exon | 62313962 | 62314086 | 62313962 | ID=Msa0463060-mRNA-1:exon:13341;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62314108 | 62314463 | 62314108 | ID=Msa0463060-mRNA-1:exon:13340;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62314599 | 62314684 | 62314599 | ID=Msa0463060-mRNA-1:exon:13339;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62314770 | 62314827 | 62314770 | ID=Msa0463060-mRNA-1:exon:13338;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62315047 | 62315169 | 62315047 | ID=Msa0463060-mRNA-1:exon:13337;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62315339 | 62315397 | 62315339 | ID=Msa0463060-mRNA-1:exon:13336;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62315535 | 62315610 | 62315535 | ID=Msa0463060-mRNA-1:exon:13335;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62315750 | 62315846 | 62315750 | ID=Msa0463060-mRNA-1:exon:13334;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62316135 | 62316216 | 62316135 | ID=Msa0463060-mRNA-1:exon:13333;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62316295 | 62316387 | 62316295 | ID=Msa0463060-mRNA-1:exon:13332;Parent=Msa0463060-mRNA-1 |
| chr3_3 | exon | 62318880 | 62319196 | 62318880 | ID=Msa0463060-mRNA-1:exon:13331;Parent=Msa0463060-mRNA-1 |
| chr3_3 | five_prime_UTR | 62319067 | 62319196 | 62319067 | ID=Msa0463060-mRNA-1:five_prime_utr;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62318880 | 62319066 | 62318880 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62316295 | 62316387 | 62316295 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62316135 | 62316216 | 62316135 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62315750 | 62315846 | 62315750 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62315535 | 62315610 | 62315535 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62315339 | 62315397 | 62315339 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62315047 | 62315169 | 62315047 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62314770 | 62314827 | 62314770 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62314599 | 62314684 | 62314599 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | CDS | 62314395 | 62314463 | 62314395 | ID=Msa0463060-mRNA-1:cds;Parent=Msa0463060-mRNA-1 |
| chr3_3 | three_prime_UTR | 62314108 | 62314394 | 62314108 | ID=Msa0463060-mRNA-1:three_prime_utr;Parent=Msa0463060-mRNA-1 |
| chr3_3 | three_prime_UTR | 62313962 | 62314086 | 62313962 | ID=Msa0463060-mRNA-1:three_prime_utr;Parent=Msa0463060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
