AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0940220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0940220 MtrunA17_Chr6g0455911 96.360 467 13 1 1 467 1 463 0.0 901
Msa0940220 MtrunA17_Chr6g0455981 83.624 458 73 1 1 458 1 456 0.0 758
Msa0940220 MtrunA17_Chr6g0455951 80.652 460 87 2 1 459 1 459 0.0 732
Msa0940220 MtrunA17_Chr6g0455941 82.684 462 77 1 1 459 1 462 0.0 730
Msa0940220 MtrunA17_Chr7g0220531 74.464 466 113 2 1 461 1 465 0.0 713
Msa0940220 MtrunA17_Chr8g0366021 58.621 464 179 4 11 463 4 465 0.0 543
Msa0940220 MtrunA17_Chr6g0459871 79.152 283 55 1 177 459 37 315 1.57e-147 423
Msa0940220 MtrunA17_Chr5g0437951 44.213 432 235 3 26 452 11 441 3.23e-128 379
Msa0940220 MtrunA17_Chr5g0437961 45.392 434 228 3 22 454 3 428 2.77e-127 376
Msa0940220 MtrunA17_Chr3g0114351 43.508 439 238 4 22 458 8 438 1.11e-119 357
Msa0940220 MtrunA17_Chr2g0333321 45.238 420 222 4 42 458 73 487 6.72e-119 357
Msa0940220 MtrunA17_Chr8g0366001 62.222 270 101 1 194 463 4 272 1.86e-118 348
Msa0940220 MtrunA17_Chr8g0365971 52.604 192 77 2 18 195 11 202 9.47e-59 192
Msa0940220 MtrunA17_Chr8g0365991 46.857 175 78 4 15 178 8 178 1.13e-37 136
Msa0940220 MtrunA17_Chr3g0114341 39.815 108 58 1 31 131 2 109 2.57e-19 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0940220 AT3G30390.1 66.228 456 151 2 5 458 2 456 0.0 611
Msa0940220 AT3G30390.3 66.228 456 151 2 5 458 2 456 0.0 611
Msa0940220 AT3G30390.2 66.228 456 151 2 5 458 2 456 0.0 611
Msa0940220 AT5G38820.2 66.742 442 144 2 19 458 15 455 0.0 600
Msa0940220 AT5G38820.1 66.742 442 144 2 19 458 10 450 0.0 600
Msa0940220 AT5G38820.3 66.742 442 144 2 19 458 10 450 0.0 600
Msa0940220 AT3G56200.1 42.191 429 242 3 27 454 9 432 2.74e-113 341
Msa0940220 AT2G40420.1 43.721 430 238 4 24 452 6 432 2.48e-110 333
Msa0940220 AT1G80510.1 43.943 421 227 4 42 458 73 488 5.99e-105 321
Msa0940220 AT2G41190.1 21.992 482 320 12 2 460 88 536 1.74e-11 66.6
Msa0940220 AT5G02180.1 24.208 442 294 16 26 457 137 547 4.13e-11 65.5
Msa0940220 AT5G02180.2 24.208 442 294 16 26 457 137 547 4.13e-11 65.5

Find 117 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTGGGTTCCTTCTATT+TGG 0.167128 6_3:+12465133 Msa0940220:CDS
ATTGTAGGTGATGTGGTTTC+TGG 0.191617 6_3:+12463583 Msa0940220:intron
TTCTTCCTATGGAAGTCTTA+TGG 0.192560 6_3:+12463002 Msa0940220:CDS
TTTCCATACTTTCAGATTAA+AGG 0.224431 6_3:+12465935 Msa0940220:three_prime_UTR
ATTGTCTACATGATTATTAT+TGG 0.230979 6_3:+12463096 Msa0940220:CDS
GTTCCTTTAATCTGAAAGTA+TGG 0.238779 6_3:-12465938 None:intergenic
TCCAAGATTAGTATCGAAAT+TGG 0.250594 6_3:-12465182 None:intergenic
TACTTACTGACAAGCTTCTT+TGG 0.258900 6_3:+12465118 Msa0940220:CDS
CTAGTCAGCTTTAAGCAAAT+TGG 0.260064 6_3:+12463721 Msa0940220:CDS
GTCGAGTTACATGAATTTAA+TGG 0.261172 6_3:+12462796 Msa0940220:CDS
TTCTGTCTTTATGATAGTTT+TGG 0.295245 6_3:+12465805 Msa0940220:CDS
GCAACTGCTGCTGTTTGTTT+AGG 0.298977 6_3:+12465451 Msa0940220:CDS
TCTTCCTATGGAAGTCTTAT+GGG 0.299793 6_3:+12463003 Msa0940220:CDS
GCCAATTTCGATACTAATCT+TGG 0.305913 6_3:+12465181 Msa0940220:CDS
ACTAATCTTGGAATTCCTTT+TGG 0.308712 6_3:+12465193 Msa0940220:CDS
CACAAAACCGCATGTTTATA+CGG 0.312673 6_3:+12466166 Msa0940220:three_prime_UTR
GCTTGTCGGCATTATCTTCA+TGG 0.328716 6_3:+12465381 Msa0940220:CDS
CAAACTTCATACCTAGCATT+TGG 0.329135 6_3:+12465407 Msa0940220:CDS
AATTTATCGACAACAGTTAT+CGG 0.330888 6_3:+12462844 Msa0940220:CDS
ACTTACTGACAAGCTTCTTT+GGG 0.334326 6_3:+12465119 Msa0940220:CDS
GGGGATGCCTTTGGGAGATA+TGG 0.338725 6_3:+12463024 Msa0940220:CDS
TCAAGTGGAATTCACCATTC+TGG 0.345896 6_3:+12463613 Msa0940220:CDS
CCTGCCTGTGTGAAGAAGTT+GGG 0.363110 6_3:+12462886 Msa0940220:CDS
TCAATTACTATTGCGCTTGT+CGG 0.378298 6_3:+12465367 Msa0940220:CDS
TACATCATCAAGAAGGCCTT+TGG 0.384444 6_3:+12465321 Msa0940220:CDS
CAATAGTAATTGACGCAAAT+CGG 0.385634 6_3:-12465357 None:intergenic
AAGATTATCAGTGGAGGTAT+TGG 0.392485 6_3:+12464223 Msa0940220:CDS
ACCATTCTTTCATAAGCAAC+AGG 0.394539 6_3:-12466312 None:intergenic
TATGCATTATCAATGGCTTA+AGG 0.395011 6_3:+12466276 Msa0940220:three_prime_UTR
CACCATTCTGGTATCCTTGA+AGG 0.400665 6_3:+12463625 Msa0940220:CDS
CAGCAGTTGCTCCAGTGAAC+TGG 0.416309 6_3:-12465438 None:intergenic
ACATCGGTTTCTTGAGACTT+AGG 0.416955 6_3:-12462775 None:intergenic
AGATTATCAGTGGAGGTATT+GGG 0.418630 6_3:+12464224 Msa0940220:CDS
TTGAATGTACCTCTATTTGT+TGG 0.425859 6_3:+12466247 Msa0940220:three_prime_UTR
AGTTATCGGTGCTGGAATCA+TGG 0.432344 6_3:+12462858 Msa0940220:CDS
AAACTTCATACCTAGCATTT+GGG 0.432392 6_3:+12465408 Msa0940220:CDS
GAGTATCGTCACCAAATAGA+AGG 0.432999 6_3:-12465144 None:intergenic
TACACAACTGTCGACATGTC+TGG 0.435560 6_3:+12466117 Msa0940220:three_prime_UTR
TCCTGTTGCTTATGAAAGAA+TGG 0.437246 6_3:+12466311 Msa0940220:three_prime_UTR
GCAGGGAATCTTTCTTCCTA+TGG 0.437556 6_3:+12462991 Msa0940220:CDS
GGTATCCTTGAAGGATGGTT+TGG 0.437844 6_3:+12463634 Msa0940220:CDS
GAGAGAGAAAACTTGAAAGC+TGG 0.440627 6_3:+12462666 Msa0940220:five_prime_UTR
AACAAGGTTGAACAAGTTGC+AGG 0.445045 6_3:-12466072 None:intergenic
CTTCCTATGGAAGTCTTATG+GGG 0.450418 6_3:+12463004 Msa0940220:CDS
TACTTCAGAGTGACTGCAGC+TGG 0.450710 6_3:-12465484 None:intergenic
GCACTTGTATGCATTATCAA+TGG 0.453457 6_3:+12466269 Msa0940220:three_prime_UTR
TCGACAACAGTTATCGGTGC+TGG 0.457161 6_3:+12462850 Msa0940220:CDS
GCCTGCCTGTGTGAAGAAGT+TGG 0.459159 6_3:+12462885 Msa0940220:CDS
TTCACATCTGCGTTATCAGT+TGG 0.463087 6_3:+12464154 Msa0940220:CDS
AAGGAAGAACAAGGAGGTTG+TGG 0.463517 6_3:+12462732 Msa0940220:CDS
TTGCTCCAGTGAACTGGAAA+AGG 0.467289 6_3:-12465432 None:intergenic
AAACTGAAGAGCATAGAGTA+AGG 0.470985 6_3:-12465096 None:intergenic
AAGGATGGTTTGGTGTCCAT+TGG 0.478302 6_3:+12463644 Msa0940220:CDS
GAAGCCGCGTCAGTAATGAT+TGG 0.478837 6_3:-12464262 None:intergenic
TTTGGTGTCCATTGGTGGAC+TGG 0.480677 6_3:+12463652 Msa0940220:CDS
GACAAACAGAAATTTAATCA+TGG 0.483567 6_3:+12466358 Msa0940220:three_prime_UTR
CTTGTCGGCATTATCTTCAT+GGG 0.484241 6_3:+12465382 Msa0940220:CDS
TAAGCAACAGGATATCCCTT+TGG 0.485162 6_3:-12466300 None:intergenic
GATGGTTTGGTGTCCATTGG+TGG 0.485337 6_3:+12463647 Msa0940220:CDS
AAGAAGTTGGGGATGGTGCC+TGG 0.489355 6_3:+12462898 Msa0940220:CDS
ATGTAAGCGGTCACCAGCAC+AGG 0.492604 6_3:-12464310 None:intergenic
AGTCAGTTGAATTCATGCTC+AGG 0.495549 6_3:+12462959 Msa0940220:CDS
CTCAATGCATAGAAAACTAC+AGG 0.499017 6_3:-12465274 None:intergenic
AAGCCGCGTCAGTAATGATT+GGG 0.499842 6_3:-12464261 None:intergenic
TCACAACATAGATAATGAAC+TGG 0.502876 6_3:+12465036 Msa0940220:CDS
AAATTCCCACAGCAATGATA+AGG 0.502943 6_3:-12464192 None:intergenic
CCCAACTTCTTCACACAGGC+AGG 0.505095 6_3:-12462886 None:intergenic
GCATTGAGGGTCAACATAGA+TGG 0.513114 6_3:+12465289 Msa0940220:CDS
GGACACCAAACCATCCTTCA+AGG 0.515087 6_3:-12463639 None:intergenic
GGCAGTCTTGTCAAATGCTG+TGG 0.515277 6_3:+12465826 Msa0940220:CDS
CTGAGAAGAAGAAGAAAACA+AGG 0.528075 6_3:+12462713 Msa0940220:CDS
ATACAAGTGCCAACAAATAG+AGG 0.530861 6_3:-12466256 None:intergenic
GATTTGATAGCTCACAGTAC+AGG 0.534418 6_3:+12465910 Msa0940220:exon
TGATCATATTGTAGGTGATG+TGG 0.535323 6_3:+12463576 Msa0940220:intron
ATCAATGGCTTAAGGACCAA+AGG 0.536872 6_3:+12466284 Msa0940220:three_prime_UTR
GTTATCGGTGCTGGAATCAT+GGG 0.537356 6_3:+12462859 Msa0940220:CDS
CCACAACATAGCAACCAAAA+CGG 0.539264 6_3:+12465772 Msa0940220:CDS
GTAATGATTGGGAAGAGTCT+TGG 0.543523 6_3:-12464250 None:intergenic
AGGAAGAACAAGGAGGTTGT+GGG 0.553210 6_3:+12462733 Msa0940220:CDS
TGGAAAAGGTCCCAAATGCT+AGG 0.553360 6_3:-12465418 None:intergenic
AAACACAGCAAGTGTTGTAA+AGG 0.554610 6_3:-12463692 None:intergenic
TCAATGGCTTAAGGACCAAA+GGG 0.560479 6_3:+12466285 Msa0940220:three_prime_UTR
TCAATTATCAAGATTATCAG+TGG 0.562076 6_3:+12464214 Msa0940220:CDS
GAAGAAAACAAGGAAGAACA+AGG 0.565028 6_3:+12462723 Msa0940220:CDS
ATTCTGGTATCCTTGAAGGA+TGG 0.574553 6_3:+12463629 Msa0940220:CDS
TAAAGGTAAGAACAAATGTA+CGG 0.575422 6_3:-12463675 None:intergenic
ATTCACCGTAGTTCCTGTGC+TGG 0.577052 6_3:+12464297 Msa0940220:CDS
ATGTACGGCCAGTCCACCAA+TGG 0.578995 6_3:-12463660 None:intergenic
AACTGAAGAGCATAGAGTAA+GGG 0.582105 6_3:-12465095 None:intergenic
TTCCTATGGAAGTCTTATGG+GGG 0.584352 6_3:+12463005 Msa0940220:CDS
ATCCTTCAAGGATACCAGAA+TGG 0.584684 6_3:-12463627 None:intergenic
CTGCCTGTGTGAAGAAGTTG+GGG 0.586666 6_3:+12462887 Msa0940220:CDS
GGTCACCAGCACAGGAACTA+CGG 0.590704 6_3:-12464302 None:intergenic
ATGAACTGGAGGATTCCTCA+TGG 0.593516 6_3:+12465050 Msa0940220:CDS
GTTTCTGGAACAACTTCAAG+TGG 0.596954 6_3:+12463598 Msa0940220:CDS
CTTCCCAATCATTACTGACG+CGG 0.600076 6_3:+12464258 Msa0940220:CDS
GAGGATTCCTCATGGATGCA+TGG 0.601299 6_3:+12465058 Msa0940220:CDS
TCATTGAGCGCAGAACCAAA+AGG 0.603525 6_3:-12465208 None:intergenic
TCATATTTACATCATCAAGA+AGG 0.609056 6_3:+12465314 Msa0940220:CDS
TCTTGAGACTTAGGTAACAA+AGG 0.609991 6_3:-12462766 None:intergenic
AATCACTTCTTATGTAACTG+TGG 0.610725 6_3:+12466216 Msa0940220:three_prime_UTR
AAATTCATGTAACTCGACAT+CGG 0.612356 6_3:-12462791 None:intergenic
CTGTGTGAAGAAGTTGGGGA+TGG 0.616486 6_3:+12462891 Msa0940220:CDS
CACTTCTTATGTAACTGTGG+AGG 0.620593 6_3:+12466219 Msa0940220:three_prime_UTR
CGGAAGTTATCAACGACCAA+AGG 0.625697 6_3:-12465337 None:intergenic
CAACATAGATAATGAACTGG+AGG 0.626300 6_3:+12465039 Msa0940220:CDS
ATTATCAAGATTATCAGTGG+AGG 0.632554 6_3:+12464217 Msa0940220:CDS
TGTGTTGTTATCAATAACGT+TGG 0.647856 6_3:+12463066 Msa0940220:CDS
GCTTACATATGTCACTACAA+TGG 0.654775 6_3:+12464325 Msa0940220:CDS
ATTTGCTTAAAGCTGACTAG+AGG 0.659050 6_3:-12463718 None:intergenic
ATTGTAGTGACATATGTAAG+CGG 0.677703 6_3:-12464323 None:intergenic
TCGAACACCGTATAAACATG+CGG 0.681428 6_3:-12466173 None:intergenic
CATCCCCAACTTCTTCACAC+AGG 0.698282 6_3:-12462890 None:intergenic
ACAGTACTCTAATACAAACA+AGG 0.700951 6_3:-12466088 None:intergenic
AGGACTATAGCAATAAGACC+AGG 0.708838 6_3:-12462916 None:intergenic
CACGACGCCATGCATCCATG+AGG 0.721371 6_3:-12465065 None:intergenic
GAAAACAAGGAAGAACAAGG+AGG 0.744501 6_3:+12462726 Msa0940220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAAATTAATTTTTTTTA+TGG + chr6_3:12465978-12465997 Msa0940220:three_prime_UTR 0.0%
!!! ATAAAATTAATTTTTTTTAT+GGG + chr6_3:12465979-12465998 Msa0940220:three_prime_UTR 0.0%
!!! TATAAAATTAATTTTTTTTA+TGG + chr6_3:12465978-12465997 Msa0940220:three_prime_UTR 0.0%
!!! ATAAAATTAATTTTTTTTAT+GGG + chr6_3:12465979-12465998 Msa0940220:three_prime_UTR 0.0%
!! TGAAAAATTGTATTTATATT+AGG + chr6_3:12464018-12464037 Msa0940220:intron 10.0%
!!! CAATTTATTTCATTTTATAA+TGG + chr6_3:12465519-12465538 Msa0940220:intron 10.0%
!!! AAATTAATTTTATATAACTG+CGG - chr6_3:12465972-12465991 None:intergenic 10.0%
!! TGAAAAATTGTATTTATATT+AGG + chr6_3:12464018-12464037 Msa0940220:intron 10.0%
!!! CAATTTATTTCATTTTATAA+TGG + chr6_3:12465519-12465538 Msa0940220:intron 10.0%
!!! AAATTAATTTTATATAACTG+CGG - chr6_3:12465972-12465991 None:intergenic 10.0%
!!! TTGTTTAGTTAAATTTTAGT+AGG - chr6_3:12465627-12465646 None:intergenic 15.0%
!!! TTGTTTAGTTAAATTTTAGT+AGG - chr6_3:12465627-12465646 None:intergenic 15.0%
!! ATTGTCTACATGATTATTAT+TGG + chr6_3:12463096-12463115 Msa0940220:CDS 20.0%
!!! GTACTAGATTTTTAAGAATA+TGG - chr6_3:12463128-12463147 None:intergenic 20.0%
!! CTTATAAAATTACAAGTTAC+TGG + chr6_3:12463809-12463828 Msa0940220:intron 20.0%
!!! ATGAATACTTGTATTGATAT+GGG - chr6_3:12464112-12464131 None:intergenic 20.0%
!!! AATGAATACTTGTATTGATA+TGG - chr6_3:12464113-12464132 None:intergenic 20.0%
!!! ACTTGAAATTCCAATTATTT+TGG + chr6_3:12464555-12464574 Msa0940220:intron 20.0%
!! GTTTGAAAAATGTTTAAAAG+TGG + chr6_3:12464714-12464733 Msa0940220:intron 20.0%
!!! CATTTAAAAAATTTCAGGTT+GGG - chr6_3:12464787-12464806 None:intergenic 20.0%
!!! TCATTTAAAAAATTTCAGGT+TGG - chr6_3:12464788-12464807 None:intergenic 20.0%
!! CTCATCATTTAAAAAATTTC+AGG - chr6_3:12464792-12464811 None:intergenic 20.0%
!!! TAAAGAATGGAAATTTTAGT+AGG - chr6_3:12465590-12465609 None:intergenic 20.0%
!!! TAAGTATTTTGTTTTCTTAC+AGG + chr6_3:12465744-12465763 Msa0940220:intron 20.0%
!!! AAGTATTTTGTTTTCTTACA+GGG + chr6_3:12465745-12465764 Msa0940220:intron 20.0%
!! ATTGTCTACATGATTATTAT+TGG + chr6_3:12463096-12463115 Msa0940220:CDS 20.0%
!!! GTACTAGATTTTTAAGAATA+TGG - chr6_3:12463128-12463147 None:intergenic 20.0%
!! CTTATAAAATTACAAGTTAC+TGG + chr6_3:12463809-12463828 Msa0940220:intron 20.0%
!!! ATGAATACTTGTATTGATAT+GGG - chr6_3:12464112-12464131 None:intergenic 20.0%
!!! AATGAATACTTGTATTGATA+TGG - chr6_3:12464113-12464132 None:intergenic 20.0%
!!! ACTTGAAATTCCAATTATTT+TGG + chr6_3:12464555-12464574 Msa0940220:intron 20.0%
!! GTTTGAAAAATGTTTAAAAG+TGG + chr6_3:12464714-12464733 Msa0940220:intron 20.0%
!!! CATTTAAAAAATTTCAGGTT+GGG - chr6_3:12464787-12464806 None:intergenic 20.0%
!!! TCATTTAAAAAATTTCAGGT+TGG - chr6_3:12464788-12464807 None:intergenic 20.0%
!! CTCATCATTTAAAAAATTTC+AGG - chr6_3:12464792-12464811 None:intergenic 20.0%
!!! TAAAGAATGGAAATTTTAGT+AGG - chr6_3:12465590-12465609 None:intergenic 20.0%
!!! TAAGTATTTTGTTTTCTTAC+AGG + chr6_3:12465744-12465763 Msa0940220:intron 20.0%
!!! AAGTATTTTGTTTTCTTACA+GGG + chr6_3:12465745-12465764 Msa0940220:intron 20.0%
!! CAAATCCAAATAGATTTTGT+TGG - chr6_3:12462451-12462470 None:intergenic 25.0%
! TGAAGAAAAGATTCAAAGTT+TGG - chr6_3:12462588-12462607 None:intergenic 25.0%
!! TTTTCTTCAACTTGAGAAAT+GGG + chr6_3:12462599-12462618 Msa0940220:intron 25.0%
! AATTTATCGACAACAGTTAT+CGG + chr6_3:12462844-12462863 Msa0940220:CDS 25.0%
!! AAATTTTTCCAAAATCACAG+TGG + chr6_3:12463447-12463466 Msa0940220:intron 25.0%
!! AAGGTTCTATAACTCAATTT+TGG + chr6_3:12463551-12463570 Msa0940220:intron 25.0%
!!! TTTTGGTTTGATCATATTGT+AGG + chr6_3:12463568-12463587 Msa0940220:intron 25.0%
! TAAAGGTAAGAACAAATGTA+CGG - chr6_3:12463678-12463697 None:intergenic 25.0%
! ATAAATTAGATGACAGTGAT+AGG + chr6_3:12463834-12463853 Msa0940220:intron 25.0%
! TCAATTATCAAGATTATCAG+TGG + chr6_3:12464214-12464233 Msa0940220:CDS 25.0%
!! AAGATAAATGAGTTCTAACA+AGG - chr6_3:12464368-12464387 None:intergenic 25.0%
! GTTATTATTTGACATGAAGA+TGG + chr6_3:12464433-12464452 Msa0940220:intron 25.0%
!! TGGTTTCTTTTCAAATTAGT+TGG - chr6_3:12464507-12464526 None:intergenic 25.0%
! CAGAACTAAACCAAAATAAT+TGG - chr6_3:12464568-12464587 None:intergenic 25.0%
!!! CAATTATTTTGGTTTAGTTC+TGG + chr6_3:12464566-12464585 Msa0940220:intron 25.0%
!! CAAGTAAATGATTGGATTTT+GGG - chr6_3:12464635-12464654 None:intergenic 25.0%
!! TCAAGTAAATGATTGGATTT+TGG - chr6_3:12464636-12464655 None:intergenic 25.0%
! TGAAAAATGTTTAAAAGTGG+TGG + chr6_3:12464717-12464736 Msa0940220:intron 25.0%
! TCATATTTACATCATCAAGA+AGG + chr6_3:12465314-12465333 Msa0940220:CDS 25.0%
! GTTTGTTTCAAACTAAAGAA+TGG - chr6_3:12465566-12465585 None:intergenic 25.0%
! GTTTGTTTCAAACTAAAGAA+TGG - chr6_3:12465566-12465585 None:intergenic 25.0%
! AAATTTAACTAAACAACGTG+AGG + chr6_3:12465631-12465650 Msa0940220:intron 25.0%
!! TTCTGTCTTTATGATAGTTT+TGG + chr6_3:12465805-12465824 Msa0940220:CDS 25.0%
! TTTCCATACTTTCAGATTAA+AGG + chr6_3:12465935-12465954 Msa0940220:three_prime_UTR 25.0%
! CTGAAAAATATTTGTACACA+TGG - chr6_3:12466039-12466058 None:intergenic 25.0%
! GACAAACAGAAATTTAATCA+TGG + chr6_3:12466358-12466377 Msa0940220:three_prime_UTR 25.0%
!! CAAATCCAAATAGATTTTGT+TGG - chr6_3:12462451-12462470 None:intergenic 25.0%
! TGAAGAAAAGATTCAAAGTT+TGG - chr6_3:12462588-12462607 None:intergenic 25.0%
!! TTTTCTTCAACTTGAGAAAT+GGG + chr6_3:12462599-12462618 Msa0940220:intron 25.0%
! AATTTATCGACAACAGTTAT+CGG + chr6_3:12462844-12462863 Msa0940220:CDS 25.0%
!! AAATTTTTCCAAAATCACAG+TGG + chr6_3:12463447-12463466 Msa0940220:intron 25.0%
!! AAGGTTCTATAACTCAATTT+TGG + chr6_3:12463551-12463570 Msa0940220:intron 25.0%
!!! TTTTGGTTTGATCATATTGT+AGG + chr6_3:12463568-12463587 Msa0940220:intron 25.0%
! TAAAGGTAAGAACAAATGTA+CGG - chr6_3:12463678-12463697 None:intergenic 25.0%
! ATAAATTAGATGACAGTGAT+AGG + chr6_3:12463834-12463853 Msa0940220:intron 25.0%
! TCAATTATCAAGATTATCAG+TGG + chr6_3:12464214-12464233 Msa0940220:CDS 25.0%
!! AAGATAAATGAGTTCTAACA+AGG - chr6_3:12464368-12464387 None:intergenic 25.0%
! GTTATTATTTGACATGAAGA+TGG + chr6_3:12464433-12464452 Msa0940220:intron 25.0%
!! TGGTTTCTTTTCAAATTAGT+TGG - chr6_3:12464507-12464526 None:intergenic 25.0%
! CAGAACTAAACCAAAATAAT+TGG - chr6_3:12464568-12464587 None:intergenic 25.0%
!!! CAATTATTTTGGTTTAGTTC+TGG + chr6_3:12464566-12464585 Msa0940220:intron 25.0%
!! CAAGTAAATGATTGGATTTT+GGG - chr6_3:12464635-12464654 None:intergenic 25.0%
!! TCAAGTAAATGATTGGATTT+TGG - chr6_3:12464636-12464655 None:intergenic 25.0%
! TGAAAAATGTTTAAAAGTGG+TGG + chr6_3:12464717-12464736 Msa0940220:intron 25.0%
! TCATATTTACATCATCAAGA+AGG + chr6_3:12465314-12465333 Msa0940220:CDS 25.0%
! GTTTGTTTCAAACTAAAGAA+TGG - chr6_3:12465566-12465585 None:intergenic 25.0%
! GTTTGTTTCAAACTAAAGAA+TGG - chr6_3:12465566-12465585 None:intergenic 25.0%
! AAATTTAACTAAACAACGTG+AGG + chr6_3:12465631-12465650 Msa0940220:intron 25.0%
!! TTCTGTCTTTATGATAGTTT+TGG + chr6_3:12465805-12465824 Msa0940220:CDS 25.0%
! TTTCCATACTTTCAGATTAA+AGG + chr6_3:12465935-12465954 Msa0940220:three_prime_UTR 25.0%
! CTGAAAAATATTTGTACACA+TGG - chr6_3:12466039-12466058 None:intergenic 25.0%
! GACAAACAGAAATTTAATCA+TGG + chr6_3:12466358-12466377 Msa0940220:three_prime_UTR 25.0%
CTCAACCAACAAAATCTATT+TGG + chr6_3:12462443-12462462 Msa0940220:intron 30.0%
! CTTTTCTTCAACTTGAGAAA+TGG + chr6_3:12462598-12462617 Msa0940220:intron 30.0%
AAATTCATGTAACTCGACAT+CGG - chr6_3:12462794-12462813 None:intergenic 30.0%
GTCGAGTTACATGAATTTAA+TGG + chr6_3:12462796-12462815 Msa0940220:CDS 30.0%
! TTTAATGGAGCTTCATTTTC+AGG + chr6_3:12462811-12462830 Msa0940220:CDS 30.0%
! TGTGTTGTTATCAATAACGT+TGG + chr6_3:12463066-12463085 Msa0940220:CDS 30.0%
TTCTACTGTTATCATCAGTT+TGG + chr6_3:12463160-12463179 Msa0940220:intron 30.0%
TTGAATGTAACCACATGTAT+CGG - chr6_3:12463278-12463297 None:intergenic 30.0%
! TTATCAGTTTGGTGAAATCA+CGG + chr6_3:12463391-12463410 Msa0940220:intron 30.0%
TTCTTGTCTAAAGAGACTTA+TGG - chr6_3:12463528-12463547 None:intergenic 30.0%
TCTCTTTAGACAAGAACTTA+AGG + chr6_3:12463532-12463551 Msa0940220:intron 30.0%
CTTATCACTGAAGTACAAAT+TGG + chr6_3:12463889-12463908 Msa0940220:intron 30.0%
!!! AGTTTTGTTGCTAAGTTGTT+TGG + chr6_3:12463928-12463947 Msa0940220:intron 30.0%
!! TGTTTTTGCTTACTTGAGTT+AGG + chr6_3:12463991-12464010 Msa0940220:intron 30.0%
! AATACTTGTATTGATATGGG+CGG - chr6_3:12464109-12464128 None:intergenic 30.0%
ATTATCAAGATTATCAGTGG+AGG + chr6_3:12464217-12464236 Msa0940220:CDS 30.0%
ATTGTAGTGACATATGTAAG+CGG - chr6_3:12464326-12464345 None:intergenic 30.0%
AGACTTATGTAACTCAATGT+TGG + chr6_3:12464411-12464430 Msa0940220:intron 30.0%
! CTTTTCAAATTAGTTGGACA+TGG - chr6_3:12464501-12464520 None:intergenic 30.0%
TCAAAAAAAGTTGACAGACA+TGG - chr6_3:12464527-12464546 None:intergenic 30.0%
TGATGTTAACATGGAATGAA+CGG - chr6_3:12464659-12464678 None:intergenic 30.0%
AACACATCATGATGTTAACA+TGG - chr6_3:12464668-12464687 None:intergenic 30.0%
CATATTGCTTACTAGTTACT+AGG + chr6_3:12464822-12464841 Msa0940220:intron 30.0%
TTGCAAAAGTTTCAATCATG+TGG + chr6_3:12464916-12464935 Msa0940220:intron 30.0%
TATACATCTATGAAACCAAC+AGG - chr6_3:12464978-12464997 None:intergenic 30.0%
TCACAACATAGATAATGAAC+TGG + chr6_3:12465036-12465055 Msa0940220:CDS 30.0%
! TCCAAGATTAGTATCGAAAT+TGG - chr6_3:12465185-12465204 None:intergenic 30.0%
! ACTAATCTTGGAATTCCTTT+TGG + chr6_3:12465193-12465212 Msa0940220:CDS 30.0%
! TGTAGTTTTCTATGCATTGA+GGG + chr6_3:12465276-12465295 Msa0940220:CDS 30.0%
CAATAGTAATTGACGCAAAT+CGG - chr6_3:12465360-12465379 None:intergenic 30.0%
AAACTTCATACCTAGCATTT+GGG + chr6_3:12465408-12465427 Msa0940220:CDS 30.0%
! AGAAAAAATCTTGTCCGTTT+TGG - chr6_3:12465789-12465808 None:intergenic 30.0%
GTTCCTTTAATCTGAAAGTA+TGG - chr6_3:12465941-12465960 None:intergenic 30.0%
!!! ATTTTTTTTATGGGGTCTGA+TGG + chr6_3:12465988-12466007 Msa0940220:three_prime_UTR 30.0%
!!! TTTTTTTTATGGGGTCTGAT+GGG + chr6_3:12465989-12466008 Msa0940220:three_prime_UTR 30.0%
!! TATTTTTCAGAAGTGTGTGA+AGG + chr6_3:12466049-12466068 Msa0940220:three_prime_UTR 30.0%
ACAGTACTCTAATACAAACA+AGG - chr6_3:12466091-12466110 None:intergenic 30.0%
AATCACTTCTTATGTAACTG+TGG + chr6_3:12466216-12466235 Msa0940220:three_prime_UTR 30.0%
TTGAATGTACCTCTATTTGT+TGG + chr6_3:12466247-12466266 Msa0940220:three_prime_UTR 30.0%
TATGCATTATCAATGGCTTA+AGG + chr6_3:12466276-12466295 Msa0940220:three_prime_UTR 30.0%
! TGGTTAAGTTCAAGCATTTT+TGG + chr6_3:12466331-12466350 Msa0940220:three_prime_UTR 30.0%
! GGTTAAGTTCAAGCATTTTT+GGG + chr6_3:12466332-12466351 Msa0940220:three_prime_UTR 30.0%
CTCAACCAACAAAATCTATT+TGG + chr6_3:12462443-12462462 Msa0940220:intron 30.0%
! CTTTTCTTCAACTTGAGAAA+TGG + chr6_3:12462598-12462617 Msa0940220:intron 30.0%
AAATTCATGTAACTCGACAT+CGG - chr6_3:12462794-12462813 None:intergenic 30.0%
GTCGAGTTACATGAATTTAA+TGG + chr6_3:12462796-12462815 Msa0940220:CDS 30.0%
! TTTAATGGAGCTTCATTTTC+AGG + chr6_3:12462811-12462830 Msa0940220:CDS 30.0%
! TGTGTTGTTATCAATAACGT+TGG + chr6_3:12463066-12463085 Msa0940220:CDS 30.0%
TTCTACTGTTATCATCAGTT+TGG + chr6_3:12463160-12463179 Msa0940220:intron 30.0%
TTGAATGTAACCACATGTAT+CGG - chr6_3:12463278-12463297 None:intergenic 30.0%
! TTATCAGTTTGGTGAAATCA+CGG + chr6_3:12463391-12463410 Msa0940220:intron 30.0%
TTCTTGTCTAAAGAGACTTA+TGG - chr6_3:12463528-12463547 None:intergenic 30.0%
TCTCTTTAGACAAGAACTTA+AGG + chr6_3:12463532-12463551 Msa0940220:intron 30.0%
CTTATCACTGAAGTACAAAT+TGG + chr6_3:12463889-12463908 Msa0940220:intron 30.0%
!!! AGTTTTGTTGCTAAGTTGTT+TGG + chr6_3:12463928-12463947 Msa0940220:intron 30.0%
!! TGTTTTTGCTTACTTGAGTT+AGG + chr6_3:12463991-12464010 Msa0940220:intron 30.0%
! AATACTTGTATTGATATGGG+CGG - chr6_3:12464109-12464128 None:intergenic 30.0%
ATTATCAAGATTATCAGTGG+AGG + chr6_3:12464217-12464236 Msa0940220:CDS 30.0%
ATTGTAGTGACATATGTAAG+CGG - chr6_3:12464326-12464345 None:intergenic 30.0%
AGACTTATGTAACTCAATGT+TGG + chr6_3:12464411-12464430 Msa0940220:intron 30.0%
! CTTTTCAAATTAGTTGGACA+TGG - chr6_3:12464501-12464520 None:intergenic 30.0%
TCAAAAAAAGTTGACAGACA+TGG - chr6_3:12464527-12464546 None:intergenic 30.0%
TGATGTTAACATGGAATGAA+CGG - chr6_3:12464659-12464678 None:intergenic 30.0%
AACACATCATGATGTTAACA+TGG - chr6_3:12464668-12464687 None:intergenic 30.0%
CATATTGCTTACTAGTTACT+AGG + chr6_3:12464822-12464841 Msa0940220:intron 30.0%
TTGCAAAAGTTTCAATCATG+TGG + chr6_3:12464916-12464935 Msa0940220:intron 30.0%
TATACATCTATGAAACCAAC+AGG - chr6_3:12464978-12464997 None:intergenic 30.0%
TCACAACATAGATAATGAAC+TGG + chr6_3:12465036-12465055 Msa0940220:CDS 30.0%
! TCCAAGATTAGTATCGAAAT+TGG - chr6_3:12465185-12465204 None:intergenic 30.0%
! ACTAATCTTGGAATTCCTTT+TGG + chr6_3:12465193-12465212 Msa0940220:CDS 30.0%
! TGTAGTTTTCTATGCATTGA+GGG + chr6_3:12465276-12465295 Msa0940220:CDS 30.0%
CAATAGTAATTGACGCAAAT+CGG - chr6_3:12465360-12465379 None:intergenic 30.0%
AAACTTCATACCTAGCATTT+GGG + chr6_3:12465408-12465427 Msa0940220:CDS 30.0%
! AGAAAAAATCTTGTCCGTTT+TGG - chr6_3:12465789-12465808 None:intergenic 30.0%
GTTCCTTTAATCTGAAAGTA+TGG - chr6_3:12465941-12465960 None:intergenic 30.0%
!!! ATTTTTTTTATGGGGTCTGA+TGG + chr6_3:12465988-12466007 Msa0940220:three_prime_UTR 30.0%
!!! TTTTTTTTATGGGGTCTGAT+GGG + chr6_3:12465989-12466008 Msa0940220:three_prime_UTR 30.0%
!! TATTTTTCAGAAGTGTGTGA+AGG + chr6_3:12466049-12466068 Msa0940220:three_prime_UTR 30.0%
ACAGTACTCTAATACAAACA+AGG - chr6_3:12466091-12466110 None:intergenic 30.0%
AATCACTTCTTATGTAACTG+TGG + chr6_3:12466216-12466235 Msa0940220:three_prime_UTR 30.0%
TTGAATGTACCTCTATTTGT+TGG + chr6_3:12466247-12466266 Msa0940220:three_prime_UTR 30.0%
TATGCATTATCAATGGCTTA+AGG + chr6_3:12466276-12466295 Msa0940220:three_prime_UTR 30.0%
! TGGTTAAGTTCAAGCATTTT+TGG + chr6_3:12466331-12466350 Msa0940220:three_prime_UTR 30.0%
! GGTTAAGTTCAAGCATTTTT+GGG + chr6_3:12466332-12466351 Msa0940220:three_prime_UTR 30.0%
!! CTTGTTTTCTTCTTCTTCTC+AGG - chr6_3:12462715-12462734 None:intergenic 35.0%
CTGAGAAGAAGAAGAAAACA+AGG + chr6_3:12462713-12462732 Msa0940220:CDS 35.0%
GAAGAAAACAAGGAAGAACA+AGG + chr6_3:12462723-12462742 Msa0940220:CDS 35.0%
TCTTGAGACTTAGGTAACAA+AGG - chr6_3:12462769-12462788 None:intergenic 35.0%
TCTCTGTCAAAAATGCTGTT+AGG - chr6_3:12462939-12462958 None:intergenic 35.0%
! AATTCATGCTCAGGTTTTCA+AGG + chr6_3:12462968-12462987 Msa0940220:CDS 35.0%
! ATTCATGCTCAGGTTTTCAA+GGG + chr6_3:12462969-12462988 Msa0940220:CDS 35.0%
TTCTTCCTATGGAAGTCTTA+TGG + chr6_3:12463002-12463021 Msa0940220:CDS 35.0%
! TCTTCCTATGGAAGTCTTAT+GGG + chr6_3:12463003-12463022 Msa0940220:CDS 35.0%
!!! GTTTGGTTTTCGTGTATGTT+TGG + chr6_3:12463177-12463196 Msa0940220:intron 35.0%
GAAATGATGCTTCAGATTGA+TGG + chr6_3:12463209-12463228 Msa0940220:intron 35.0%
! TAACCCTGTGATTTTGTTAG+AGG + chr6_3:12463414-12463433 Msa0940220:intron 35.0%
GTACCTCTAACAAAATCACA+GGG - chr6_3:12463420-12463439 None:intergenic 35.0%
TGTACCTCTAACAAAATCAC+AGG - chr6_3:12463421-12463440 None:intergenic 35.0%
!! TGGATTGGTGATGAGTTTAA+CGG - chr6_3:12463485-12463504 None:intergenic 35.0%
TGATCATATTGTAGGTGATG+TGG + chr6_3:12463576-12463595 Msa0940220:intron 35.0%
! AAACACAGCAAGTGTTGTAA+AGG - chr6_3:12463695-12463714 None:intergenic 35.0%
ATTTGCTTAAAGCTGACTAG+AGG - chr6_3:12463721-12463740 None:intergenic 35.0%
!! CTAGTCAGCTTTAAGCAAAT+TGG + chr6_3:12463721-12463740 Msa0940220:CDS 35.0%
TGTACTTCAGTGATAAGCTA+TGG - chr6_3:12463886-12463905 None:intergenic 35.0%
! CCACAAAGCATCTAAAACTA+TGG - chr6_3:12464074-12464093 None:intergenic 35.0%
!!! CCATAGTTTTAGATGCTTTG+TGG + chr6_3:12464071-12464090 Msa0940220:intron 35.0%
! TGTTTTCCTTATCATTGCTG+TGG + chr6_3:12464186-12464205 Msa0940220:CDS 35.0%
! GTTTTCCTTATCATTGCTGT+GGG + chr6_3:12464187-12464206 Msa0940220:CDS 35.0%
AAATTCCCACAGCAATGATA+AGG - chr6_3:12464195-12464214 None:intergenic 35.0%
! AAGATTATCAGTGGAGGTAT+TGG + chr6_3:12464223-12464242 Msa0940220:CDS 35.0%
!! AGATTATCAGTGGAGGTATT+GGG + chr6_3:12464224-12464243 Msa0940220:CDS 35.0%
GCTTACATATGTCACTACAA+TGG + chr6_3:12464325-12464344 Msa0940220:CDS 35.0%
!! TTGGGTGATCAAATTTTAGC+AGG - chr6_3:12464617-12464636 None:intergenic 35.0%
TGAACGGTCAAGTAAATGAT+TGG - chr6_3:12464643-12464662 None:intergenic 35.0%
TCATGATGTGTTAAGAGTCA+CGG + chr6_3:12464676-12464695 Msa0940220:intron 35.0%
GTCAGCGTTAATTAGTAGTT+TGG - chr6_3:12464891-12464910 None:intergenic 35.0%
ATGATTGCAGTTAGCTATCT+AGG + chr6_3:12464948-12464967 Msa0940220:intron 35.0%
GGTTTCATAGATGTATAACC+TGG + chr6_3:12464981-12465000 Msa0940220:intron 35.0%
TTCATAGATGTATAACCTGG+TGG + chr6_3:12464984-12465003 Msa0940220:intron 35.0%
CAACATAGATAATGAACTGG+AGG + chr6_3:12465039-12465058 Msa0940220:CDS 35.0%
! AACTGAAGAGCATAGAGTAA+GGG - chr6_3:12465098-12465117 None:intergenic 35.0%
! AAACTGAAGAGCATAGAGTA+AGG - chr6_3:12465099-12465118 None:intergenic 35.0%
TACTTACTGACAAGCTTCTT+TGG + chr6_3:12465118-12465137 Msa0940220:CDS 35.0%
ACTTACTGACAAGCTTCTTT+GGG + chr6_3:12465119-12465138 Msa0940220:CDS 35.0%
! TTCTTTGGGTTCCTTCTATT+TGG + chr6_3:12465133-12465152 Msa0940220:CDS 35.0%
GCCAATTTCGATACTAATCT+TGG + chr6_3:12465181-12465200 Msa0940220:CDS 35.0%
CTCAATGCATAGAAAACTAC+AGG - chr6_3:12465277-12465296 None:intergenic 35.0%
! CTGTAGTTTTCTATGCATTG+AGG + chr6_3:12465275-12465294 Msa0940220:CDS 35.0%
TCAATTACTATTGCGCTTGT+CGG + chr6_3:12465367-12465386 Msa0940220:CDS 35.0%
CAAACTTCATACCTAGCATT+TGG + chr6_3:12465407-12465426 Msa0940220:CDS 35.0%
AACTAAACAACGTGAGGTAA+TGG + chr6_3:12465637-12465656 Msa0940220:intron 35.0%
CACAAAACCGCATGTTTATA+CGG + chr6_3:12466166-12466185 Msa0940220:three_prime_UTR 35.0%
ATACAAGTGCCAACAAATAG+AGG - chr6_3:12466259-12466278 None:intergenic 35.0%
GCACTTGTATGCATTATCAA+TGG + chr6_3:12466269-12466288 Msa0940220:three_prime_UTR 35.0%
! TCCTGTTGCTTATGAAAGAA+TGG + chr6_3:12466311-12466330 Msa0940220:three_prime_UTR 35.0%
ACCATTCTTTCATAAGCAAC+AGG - chr6_3:12466315-12466334 None:intergenic 35.0%
!! CTTGTTTTCTTCTTCTTCTC+AGG - chr6_3:12462715-12462734 None:intergenic 35.0%
CTGAGAAGAAGAAGAAAACA+AGG + chr6_3:12462713-12462732 Msa0940220:CDS 35.0%
GAAGAAAACAAGGAAGAACA+AGG + chr6_3:12462723-12462742 Msa0940220:CDS 35.0%
TCTTGAGACTTAGGTAACAA+AGG - chr6_3:12462769-12462788 None:intergenic 35.0%
TCTCTGTCAAAAATGCTGTT+AGG - chr6_3:12462939-12462958 None:intergenic 35.0%
! AATTCATGCTCAGGTTTTCA+AGG + chr6_3:12462968-12462987 Msa0940220:CDS 35.0%
! ATTCATGCTCAGGTTTTCAA+GGG + chr6_3:12462969-12462988 Msa0940220:CDS 35.0%
TTCTTCCTATGGAAGTCTTA+TGG + chr6_3:12463002-12463021 Msa0940220:CDS 35.0%
! TCTTCCTATGGAAGTCTTAT+GGG + chr6_3:12463003-12463022 Msa0940220:CDS 35.0%
!!! GTTTGGTTTTCGTGTATGTT+TGG + chr6_3:12463177-12463196 Msa0940220:intron 35.0%
GAAATGATGCTTCAGATTGA+TGG + chr6_3:12463209-12463228 Msa0940220:intron 35.0%
! TAACCCTGTGATTTTGTTAG+AGG + chr6_3:12463414-12463433 Msa0940220:intron 35.0%
GTACCTCTAACAAAATCACA+GGG - chr6_3:12463420-12463439 None:intergenic 35.0%
TGTACCTCTAACAAAATCAC+AGG - chr6_3:12463421-12463440 None:intergenic 35.0%
!! TGGATTGGTGATGAGTTTAA+CGG - chr6_3:12463485-12463504 None:intergenic 35.0%
TGATCATATTGTAGGTGATG+TGG + chr6_3:12463576-12463595 Msa0940220:intron 35.0%
! AAACACAGCAAGTGTTGTAA+AGG - chr6_3:12463695-12463714 None:intergenic 35.0%
ATTTGCTTAAAGCTGACTAG+AGG - chr6_3:12463721-12463740 None:intergenic 35.0%
!! CTAGTCAGCTTTAAGCAAAT+TGG + chr6_3:12463721-12463740 Msa0940220:CDS 35.0%
TGTACTTCAGTGATAAGCTA+TGG - chr6_3:12463886-12463905 None:intergenic 35.0%
! CCACAAAGCATCTAAAACTA+TGG - chr6_3:12464074-12464093 None:intergenic 35.0%
!!! CCATAGTTTTAGATGCTTTG+TGG + chr6_3:12464071-12464090 Msa0940220:intron 35.0%
! TGTTTTCCTTATCATTGCTG+TGG + chr6_3:12464186-12464205 Msa0940220:CDS 35.0%
! GTTTTCCTTATCATTGCTGT+GGG + chr6_3:12464187-12464206 Msa0940220:CDS 35.0%
AAATTCCCACAGCAATGATA+AGG - chr6_3:12464195-12464214 None:intergenic 35.0%
! AAGATTATCAGTGGAGGTAT+TGG + chr6_3:12464223-12464242 Msa0940220:CDS 35.0%
!! AGATTATCAGTGGAGGTATT+GGG + chr6_3:12464224-12464243 Msa0940220:CDS 35.0%
GCTTACATATGTCACTACAA+TGG + chr6_3:12464325-12464344 Msa0940220:CDS 35.0%
!! TTGGGTGATCAAATTTTAGC+AGG - chr6_3:12464617-12464636 None:intergenic 35.0%
TGAACGGTCAAGTAAATGAT+TGG - chr6_3:12464643-12464662 None:intergenic 35.0%
TCATGATGTGTTAAGAGTCA+CGG + chr6_3:12464676-12464695 Msa0940220:intron 35.0%
GTCAGCGTTAATTAGTAGTT+TGG - chr6_3:12464891-12464910 None:intergenic 35.0%
ATGATTGCAGTTAGCTATCT+AGG + chr6_3:12464948-12464967 Msa0940220:intron 35.0%
GGTTTCATAGATGTATAACC+TGG + chr6_3:12464981-12465000 Msa0940220:intron 35.0%
TTCATAGATGTATAACCTGG+TGG + chr6_3:12464984-12465003 Msa0940220:intron 35.0%
CAACATAGATAATGAACTGG+AGG + chr6_3:12465039-12465058 Msa0940220:CDS 35.0%
! AACTGAAGAGCATAGAGTAA+GGG - chr6_3:12465098-12465117 None:intergenic 35.0%
! AAACTGAAGAGCATAGAGTA+AGG - chr6_3:12465099-12465118 None:intergenic 35.0%
TACTTACTGACAAGCTTCTT+TGG + chr6_3:12465118-12465137 Msa0940220:CDS 35.0%
ACTTACTGACAAGCTTCTTT+GGG + chr6_3:12465119-12465138 Msa0940220:CDS 35.0%
! TTCTTTGGGTTCCTTCTATT+TGG + chr6_3:12465133-12465152 Msa0940220:CDS 35.0%
GCCAATTTCGATACTAATCT+TGG + chr6_3:12465181-12465200 Msa0940220:CDS 35.0%
CTCAATGCATAGAAAACTAC+AGG - chr6_3:12465277-12465296 None:intergenic 35.0%
! CTGTAGTTTTCTATGCATTG+AGG + chr6_3:12465275-12465294 Msa0940220:CDS 35.0%
TCAATTACTATTGCGCTTGT+CGG + chr6_3:12465367-12465386 Msa0940220:CDS 35.0%
CAAACTTCATACCTAGCATT+TGG + chr6_3:12465407-12465426 Msa0940220:CDS 35.0%
AACTAAACAACGTGAGGTAA+TGG + chr6_3:12465637-12465656 Msa0940220:intron 35.0%
CACAAAACCGCATGTTTATA+CGG + chr6_3:12466166-12466185 Msa0940220:three_prime_UTR 35.0%
ATACAAGTGCCAACAAATAG+AGG - chr6_3:12466259-12466278 None:intergenic 35.0%
GCACTTGTATGCATTATCAA+TGG + chr6_3:12466269-12466288 Msa0940220:three_prime_UTR 35.0%
! TCCTGTTGCTTATGAAAGAA+TGG + chr6_3:12466311-12466330 Msa0940220:three_prime_UTR 35.0%
ACCATTCTTTCATAAGCAAC+AGG - chr6_3:12466315-12466334 None:intergenic 35.0%
GAGAGAGAAAACTTGAAAGC+TGG + chr6_3:12462666-12462685 Msa0940220:five_prime_UTR 40.0%
GAAAACAAGGAAGAACAAGG+AGG + chr6_3:12462726-12462745 Msa0940220:CDS 40.0%
!! ACATCGGTTTCTTGAGACTT+AGG - chr6_3:12462778-12462797 None:intergenic 40.0%
AGGACTATAGCAATAAGACC+AGG - chr6_3:12462919-12462938 None:intergenic 40.0%
AGTCAGTTGAATTCATGCTC+AGG + chr6_3:12462959-12462978 Msa0940220:CDS 40.0%
! CTTCCTATGGAAGTCTTATG+GGG + chr6_3:12463004-12463023 Msa0940220:CDS 40.0%
! TTCCTATGGAAGTCTTATGG+GGG + chr6_3:12463005-12463024 Msa0940220:CDS 40.0%
! TGCTTTTCCATATCTCCCAA+AGG - chr6_3:12463034-12463053 None:intergenic 40.0%
!! CTTCAGATTGATGGTGTGAT+TGG + chr6_3:12463218-12463237 Msa0940220:intron 40.0%
!! TCAACACGTCGATTTCAATG+TGG + chr6_3:12463328-12463347 Msa0940220:intron 40.0%
! GTCGATTTCAATGTGGTGTT+TGG + chr6_3:12463335-12463354 Msa0940220:intron 40.0%
TGTCTGTGTCAGTGTTTCAT+TGG + chr6_3:12463358-12463377 Msa0940220:intron 40.0%
!! GCTTGGATGGATTATCAGTT+TGG + chr6_3:12463380-12463399 Msa0940220:intron 40.0%
TCCAAAATCACAGTGGTCTA+CGG + chr6_3:12463454-12463473 Msa0940220:intron 40.0%
CTTATCAACGAGTGCATGTT+TGG - chr6_3:12463505-12463524 None:intergenic 40.0%
ATTGTAGGTGATGTGGTTTC+TGG + chr6_3:12463583-12463602 Msa0940220:intron 40.0%
!! GTTTCTGGAACAACTTCAAG+TGG + chr6_3:12463598-12463617 Msa0940220:CDS 40.0%
TCAAGTGGAATTCACCATTC+TGG + chr6_3:12463613-12463632 Msa0940220:CDS 40.0%
ATCCTTCAAGGATACCAGAA+TGG - chr6_3:12463630-12463649 None:intergenic 40.0%
ATTCTGGTATCCTTGAAGGA+TGG + chr6_3:12463629-12463648 Msa0940220:CDS 40.0%
TTCACATCTGCGTTATCAGT+TGG + chr6_3:12464154-12464173 Msa0940220:CDS 40.0%
GTAATGATTGGGAAGAGTCT+TGG - chr6_3:12464253-12464272 None:intergenic 40.0%
ATGTGTTAAGAGTCACGGAT+TGG + chr6_3:12464681-12464700 Msa0940220:intron 40.0%
!! ACCTTGCAATCCAGTTTTGT+AGG + chr6_3:12464749-12464768 Msa0940220:intron 40.0%
!! CCTTGCAATCCAGTTTTGTA+GGG + chr6_3:12464750-12464769 Msa0940220:intron 40.0%
!! CTTGCAATCCAGTTTTGTAG+GGG + chr6_3:12464751-12464770 Msa0940220:intron 40.0%
TAACTCAACCCCTACAAAAC+TGG - chr6_3:12464762-12464781 None:intergenic 40.0%
!! AGTTTTGTAGGGGTTGAGTT+AGG + chr6_3:12464761-12464780 Msa0940220:intron 40.0%
TGCTTACTAGTTACTAGGCT+TGG + chr6_3:12464827-12464846 Msa0940220:intron 40.0%
! TACTAGTTACTAGGCTTGGT+TGG + chr6_3:12464831-12464850 Msa0940220:intron 40.0%
ACATCTATGAAACCAACAGG+CGG - chr6_3:12464975-12464994 None:intergenic 40.0%
! GAGTATCGTCACCAAATAGA+AGG - chr6_3:12465147-12465166 None:intergenic 40.0%
TACATCATCAAGAAGGCCTT+TGG + chr6_3:12465321-12465340 Msa0940220:CDS 40.0%
CTTGTCGGCATTATCTTCAT+GGG + chr6_3:12465382-12465401 Msa0940220:CDS 40.0%
!! TTTTGGTTGCTATGTTGTGG+CGG - chr6_3:12465772-12465791 None:intergenic 40.0%
CCACAACATAGCAACCAAAA+CGG + chr6_3:12465772-12465791 Msa0940220:CDS 40.0%
! GATTTGATAGCTCACAGTAC+AGG + chr6_3:12465910-12465929 Msa0940220:exon 40.0%
AACAAGGTTGAACAAGTTGC+AGG - chr6_3:12466075-12466094 None:intergenic 40.0%
TCGAACACCGTATAAACATG+CGG - chr6_3:12466176-12466195 None:intergenic 40.0%
CACTTCTTATGTAACTGTGG+AGG + chr6_3:12466219-12466238 Msa0940220:three_prime_UTR 40.0%
ATCAATGGCTTAAGGACCAA+AGG + chr6_3:12466284-12466303 Msa0940220:three_prime_UTR 40.0%
TCAATGGCTTAAGGACCAAA+GGG + chr6_3:12466285-12466304 Msa0940220:three_prime_UTR 40.0%
TAAGCAACAGGATATCCCTT+TGG - chr6_3:12466303-12466322 None:intergenic 40.0%
GAGAGAGAAAACTTGAAAGC+TGG + chr6_3:12462666-12462685 Msa0940220:five_prime_UTR 40.0%
GAAAACAAGGAAGAACAAGG+AGG + chr6_3:12462726-12462745 Msa0940220:CDS 40.0%
!! ACATCGGTTTCTTGAGACTT+AGG - chr6_3:12462778-12462797 None:intergenic 40.0%
AGGACTATAGCAATAAGACC+AGG - chr6_3:12462919-12462938 None:intergenic 40.0%
AGTCAGTTGAATTCATGCTC+AGG + chr6_3:12462959-12462978 Msa0940220:CDS 40.0%
! CTTCCTATGGAAGTCTTATG+GGG + chr6_3:12463004-12463023 Msa0940220:CDS 40.0%
! TTCCTATGGAAGTCTTATGG+GGG + chr6_3:12463005-12463024 Msa0940220:CDS 40.0%
! TGCTTTTCCATATCTCCCAA+AGG - chr6_3:12463034-12463053 None:intergenic 40.0%
!! CTTCAGATTGATGGTGTGAT+TGG + chr6_3:12463218-12463237 Msa0940220:intron 40.0%
!! TCAACACGTCGATTTCAATG+TGG + chr6_3:12463328-12463347 Msa0940220:intron 40.0%
! GTCGATTTCAATGTGGTGTT+TGG + chr6_3:12463335-12463354 Msa0940220:intron 40.0%
TGTCTGTGTCAGTGTTTCAT+TGG + chr6_3:12463358-12463377 Msa0940220:intron 40.0%
!! GCTTGGATGGATTATCAGTT+TGG + chr6_3:12463380-12463399 Msa0940220:intron 40.0%
TCCAAAATCACAGTGGTCTA+CGG + chr6_3:12463454-12463473 Msa0940220:intron 40.0%
CTTATCAACGAGTGCATGTT+TGG - chr6_3:12463505-12463524 None:intergenic 40.0%
ATTGTAGGTGATGTGGTTTC+TGG + chr6_3:12463583-12463602 Msa0940220:intron 40.0%
!! GTTTCTGGAACAACTTCAAG+TGG + chr6_3:12463598-12463617 Msa0940220:CDS 40.0%
TCAAGTGGAATTCACCATTC+TGG + chr6_3:12463613-12463632 Msa0940220:CDS 40.0%
ATCCTTCAAGGATACCAGAA+TGG - chr6_3:12463630-12463649 None:intergenic 40.0%
ATTCTGGTATCCTTGAAGGA+TGG + chr6_3:12463629-12463648 Msa0940220:CDS 40.0%
TTCACATCTGCGTTATCAGT+TGG + chr6_3:12464154-12464173 Msa0940220:CDS 40.0%
GTAATGATTGGGAAGAGTCT+TGG - chr6_3:12464253-12464272 None:intergenic 40.0%
ATGTGTTAAGAGTCACGGAT+TGG + chr6_3:12464681-12464700 Msa0940220:intron 40.0%
!! ACCTTGCAATCCAGTTTTGT+AGG + chr6_3:12464749-12464768 Msa0940220:intron 40.0%
!! CCTTGCAATCCAGTTTTGTA+GGG + chr6_3:12464750-12464769 Msa0940220:intron 40.0%
!! CTTGCAATCCAGTTTTGTAG+GGG + chr6_3:12464751-12464770 Msa0940220:intron 40.0%
TAACTCAACCCCTACAAAAC+TGG - chr6_3:12464762-12464781 None:intergenic 40.0%
!! AGTTTTGTAGGGGTTGAGTT+AGG + chr6_3:12464761-12464780 Msa0940220:intron 40.0%
TGCTTACTAGTTACTAGGCT+TGG + chr6_3:12464827-12464846 Msa0940220:intron 40.0%
! TACTAGTTACTAGGCTTGGT+TGG + chr6_3:12464831-12464850 Msa0940220:intron 40.0%
ACATCTATGAAACCAACAGG+CGG - chr6_3:12464975-12464994 None:intergenic 40.0%
! GAGTATCGTCACCAAATAGA+AGG - chr6_3:12465147-12465166 None:intergenic 40.0%
TACATCATCAAGAAGGCCTT+TGG + chr6_3:12465321-12465340 Msa0940220:CDS 40.0%
CTTGTCGGCATTATCTTCAT+GGG + chr6_3:12465382-12465401 Msa0940220:CDS 40.0%
!! TTTTGGTTGCTATGTTGTGG+CGG - chr6_3:12465772-12465791 None:intergenic 40.0%
CCACAACATAGCAACCAAAA+CGG + chr6_3:12465772-12465791 Msa0940220:CDS 40.0%
! GATTTGATAGCTCACAGTAC+AGG + chr6_3:12465910-12465929 Msa0940220:exon 40.0%
AACAAGGTTGAACAAGTTGC+AGG - chr6_3:12466075-12466094 None:intergenic 40.0%
TCGAACACCGTATAAACATG+CGG - chr6_3:12466176-12466195 None:intergenic 40.0%
CACTTCTTATGTAACTGTGG+AGG + chr6_3:12466219-12466238 Msa0940220:three_prime_UTR 40.0%
ATCAATGGCTTAAGGACCAA+AGG + chr6_3:12466284-12466303 Msa0940220:three_prime_UTR 40.0%
TCAATGGCTTAAGGACCAAA+GGG + chr6_3:12466285-12466304 Msa0940220:three_prime_UTR 40.0%
TAAGCAACAGGATATCCCTT+TGG - chr6_3:12466303-12466322 None:intergenic 40.0%
AAGGAAGAACAAGGAGGTTG+TGG + chr6_3:12462732-12462751 Msa0940220:CDS 45.0%
AGGAAGAACAAGGAGGTTGT+GGG + chr6_3:12462733-12462752 Msa0940220:CDS 45.0%
!! AGTTATCGGTGCTGGAATCA+TGG + chr6_3:12462858-12462877 Msa0940220:CDS 45.0%
!! GTTATCGGTGCTGGAATCAT+GGG + chr6_3:12462859-12462878 Msa0940220:CDS 45.0%
GCAGGGAATCTTTCTTCCTA+TGG + chr6_3:12462991-12463010 Msa0940220:CDS 45.0%
ATCCCCCATAAGACTTCCAT+AGG - chr6_3:12463010-12463029 None:intergenic 45.0%
TGACAAGACACCGATACATG+TGG + chr6_3:12463265-12463284 Msa0940220:intron 45.0%
! GTGTCAGTGTTTCATTGGCT+TGG + chr6_3:12463363-12463382 Msa0940220:intron 45.0%
!! CAGTGTTTCATTGGCTTGGA+TGG + chr6_3:12463367-12463386 Msa0940220:intron 45.0%
! TCCGTAGACCACTGTGATTT+TGG - chr6_3:12463458-12463477 None:intergenic 45.0%
CAACGAGTGCATGTTTGGAT+TGG - chr6_3:12463500-12463519 None:intergenic 45.0%
CACCATTCTGGTATCCTTGA+AGG + chr6_3:12463625-12463644 Msa0940220:CDS 45.0%
GGTATCCTTGAAGGATGGTT+TGG + chr6_3:12463634-12463653 Msa0940220:CDS 45.0%
!! AAGGATGGTTTGGTGTCCAT+TGG + chr6_3:12463644-12463663 Msa0940220:CDS 45.0%
TATTGATATGGGCGGTGTTC+AGG - chr6_3:12464101-12464120 None:intergenic 45.0%
CTTCCCAATCATTACTGACG+CGG + chr6_3:12464258-12464277 Msa0940220:CDS 45.0%
AAGCCGCGTCAGTAATGATT+GGG - chr6_3:12464264-12464283 None:intergenic 45.0%
!! AAATTTTAGCAGGCCCAGGT+CGG - chr6_3:12464607-12464626 None:intergenic 45.0%
!! GATCAAATTTTAGCAGGCCC+AGG - chr6_3:12464611-12464630 None:intergenic 45.0%
!! GTCACGGATTGGACTAGATA+TGG + chr6_3:12464692-12464711 Msa0940220:intron 45.0%
CAAAACTGGATTGCAAGGTG+AGG - chr6_3:12464748-12464767 None:intergenic 45.0%
CCCTACAAAACTGGATTGCA+AGG - chr6_3:12464753-12464772 None:intergenic 45.0%
ATGAACTGGAGGATTCCTCA+TGG + chr6_3:12465050-12465069 Msa0940220:CDS 45.0%
TCATTGAGCGCAGAACCAAA+AGG - chr6_3:12465211-12465230 None:intergenic 45.0%
GCATTGAGGGTCAACATAGA+TGG + chr6_3:12465289-12465308 Msa0940220:CDS 45.0%
CGGAAGTTATCAACGACCAA+AGG - chr6_3:12465340-12465359 None:intergenic 45.0%
GCTTGTCGGCATTATCTTCA+TGG + chr6_3:12465381-12465400 Msa0940220:CDS 45.0%
TGGAAAAGGTCCCAAATGCT+AGG - chr6_3:12465421-12465440 None:intergenic 45.0%
TTGCTCCAGTGAACTGGAAA+AGG - chr6_3:12465435-12465454 None:intergenic 45.0%
! GCAACTGCTGCTGTTTGTTT+AGG + chr6_3:12465451-12465470 Msa0940220:CDS 45.0%
!!! CCGTTTTGGTTGCTATGTTG+TGG - chr6_3:12465775-12465794 None:intergenic 45.0%
TACACAACTGTCGACATGTC+TGG + chr6_3:12466117-12466136 Msa0940220:three_prime_UTR 45.0%
AAGGAAGAACAAGGAGGTTG+TGG + chr6_3:12462732-12462751 Msa0940220:CDS 45.0%
AGGAAGAACAAGGAGGTTGT+GGG + chr6_3:12462733-12462752 Msa0940220:CDS 45.0%
!! AGTTATCGGTGCTGGAATCA+TGG + chr6_3:12462858-12462877 Msa0940220:CDS 45.0%
!! GTTATCGGTGCTGGAATCAT+GGG + chr6_3:12462859-12462878 Msa0940220:CDS 45.0%
GCAGGGAATCTTTCTTCCTA+TGG + chr6_3:12462991-12463010 Msa0940220:CDS 45.0%
ATCCCCCATAAGACTTCCAT+AGG - chr6_3:12463010-12463029 None:intergenic 45.0%
TGACAAGACACCGATACATG+TGG + chr6_3:12463265-12463284 Msa0940220:intron 45.0%
! GTGTCAGTGTTTCATTGGCT+TGG + chr6_3:12463363-12463382 Msa0940220:intron 45.0%
!! CAGTGTTTCATTGGCTTGGA+TGG + chr6_3:12463367-12463386 Msa0940220:intron 45.0%
! TCCGTAGACCACTGTGATTT+TGG - chr6_3:12463458-12463477 None:intergenic 45.0%
CAACGAGTGCATGTTTGGAT+TGG - chr6_3:12463500-12463519 None:intergenic 45.0%
CACCATTCTGGTATCCTTGA+AGG + chr6_3:12463625-12463644 Msa0940220:CDS 45.0%
GGTATCCTTGAAGGATGGTT+TGG + chr6_3:12463634-12463653 Msa0940220:CDS 45.0%
!! AAGGATGGTTTGGTGTCCAT+TGG + chr6_3:12463644-12463663 Msa0940220:CDS 45.0%
TATTGATATGGGCGGTGTTC+AGG - chr6_3:12464101-12464120 None:intergenic 45.0%
CTTCCCAATCATTACTGACG+CGG + chr6_3:12464258-12464277 Msa0940220:CDS 45.0%
AAGCCGCGTCAGTAATGATT+GGG - chr6_3:12464264-12464283 None:intergenic 45.0%
!! AAATTTTAGCAGGCCCAGGT+CGG - chr6_3:12464607-12464626 None:intergenic 45.0%
!! GATCAAATTTTAGCAGGCCC+AGG - chr6_3:12464611-12464630 None:intergenic 45.0%
!! GTCACGGATTGGACTAGATA+TGG + chr6_3:12464692-12464711 Msa0940220:intron 45.0%
CAAAACTGGATTGCAAGGTG+AGG - chr6_3:12464748-12464767 None:intergenic 45.0%
CCCTACAAAACTGGATTGCA+AGG - chr6_3:12464753-12464772 None:intergenic 45.0%
ATGAACTGGAGGATTCCTCA+TGG + chr6_3:12465050-12465069 Msa0940220:CDS 45.0%
TCATTGAGCGCAGAACCAAA+AGG - chr6_3:12465211-12465230 None:intergenic 45.0%
GCATTGAGGGTCAACATAGA+TGG + chr6_3:12465289-12465308 Msa0940220:CDS 45.0%
CGGAAGTTATCAACGACCAA+AGG - chr6_3:12465340-12465359 None:intergenic 45.0%
GCTTGTCGGCATTATCTTCA+TGG + chr6_3:12465381-12465400 Msa0940220:CDS 45.0%
TGGAAAAGGTCCCAAATGCT+AGG - chr6_3:12465421-12465440 None:intergenic 45.0%
TTGCTCCAGTGAACTGGAAA+AGG - chr6_3:12465435-12465454 None:intergenic 45.0%
! GCAACTGCTGCTGTTTGTTT+AGG + chr6_3:12465451-12465470 Msa0940220:CDS 45.0%
!!! CCGTTTTGGTTGCTATGTTG+TGG - chr6_3:12465775-12465794 None:intergenic 45.0%
TACACAACTGTCGACATGTC+TGG + chr6_3:12466117-12466136 Msa0940220:three_prime_UTR 45.0%
!!! TAAAATTAATTTTTTTTATG+GGG + chr6_3:12465980-12465999 Msa0940220:three_prime_UTR 5.0%
!!! TAAAATTAATTTTTTTTATG+GGG + chr6_3:12465980-12465999 Msa0940220:three_prime_UTR 5.0%
TCGACAACAGTTATCGGTGC+TGG + chr6_3:12462850-12462869 Msa0940220:CDS 50.0%
CCTGCCTGTGTGAAGAAGTT+GGG + chr6_3:12462886-12462905 Msa0940220:CDS 50.0%
CTGCCTGTGTGAAGAAGTTG+GGG + chr6_3:12462887-12462906 Msa0940220:CDS 50.0%
CATCCCCAACTTCTTCACAC+AGG - chr6_3:12462893-12462912 None:intergenic 50.0%
CTGTGTGAAGAAGTTGGGGA+TGG + chr6_3:12462891-12462910 Msa0940220:CDS 50.0%
!! ATGCTCAGGTTTTCAAGGGC+AGG + chr6_3:12462973-12462992 Msa0940220:CDS 50.0%
!! TGCTCAGGTTTTCAAGGGCA+GGG + chr6_3:12462974-12462993 Msa0940220:CDS 50.0%
! AGTCTTATGGGGGATGCCTT+TGG + chr6_3:12463015-12463034 Msa0940220:CDS 50.0%
GTCTTATGGGGGATGCCTTT+GGG + chr6_3:12463016-12463035 Msa0940220:CDS 50.0%
GGACACCAAACCATCCTTCA+AGG - chr6_3:12463642-12463661 None:intergenic 50.0%
!! GATGGTTTGGTGTCCATTGG+TGG + chr6_3:12463647-12463666 Msa0940220:CDS 50.0%
!! TTTGGTGTCCATTGGTGGAC+TGG + chr6_3:12463652-12463671 Msa0940220:CDS 50.0%
GAAGCCGCGTCAGTAATGAT+TGG - chr6_3:12464265-12464284 None:intergenic 50.0%
ATTCACCGTAGTTCCTGTGC+TGG + chr6_3:12464297-12464316 Msa0940220:CDS 50.0%
GAGGATTCCTCATGGATGCA+TGG + chr6_3:12465058-12465077 Msa0940220:CDS 50.0%
! TGGGACCTTTTCCAGTTCAC+TGG + chr6_3:12465427-12465446 Msa0940220:CDS 50.0%
TACTTCAGAGTGACTGCAGC+TGG - chr6_3:12465487-12465506 None:intergenic 50.0%
! GGCAGTCTTGTCAAATGCTG+TGG + chr6_3:12465826-12465845 Msa0940220:CDS 50.0%
TCGACAACAGTTATCGGTGC+TGG + chr6_3:12462850-12462869 Msa0940220:CDS 50.0%
CCTGCCTGTGTGAAGAAGTT+GGG + chr6_3:12462886-12462905 Msa0940220:CDS 50.0%
CTGCCTGTGTGAAGAAGTTG+GGG + chr6_3:12462887-12462906 Msa0940220:CDS 50.0%
CATCCCCAACTTCTTCACAC+AGG - chr6_3:12462893-12462912 None:intergenic 50.0%
CTGTGTGAAGAAGTTGGGGA+TGG + chr6_3:12462891-12462910 Msa0940220:CDS 50.0%
!! ATGCTCAGGTTTTCAAGGGC+AGG + chr6_3:12462973-12462992 Msa0940220:CDS 50.0%
!! TGCTCAGGTTTTCAAGGGCA+GGG + chr6_3:12462974-12462993 Msa0940220:CDS 50.0%
! AGTCTTATGGGGGATGCCTT+TGG + chr6_3:12463015-12463034 Msa0940220:CDS 50.0%
GTCTTATGGGGGATGCCTTT+GGG + chr6_3:12463016-12463035 Msa0940220:CDS 50.0%
GGACACCAAACCATCCTTCA+AGG - chr6_3:12463642-12463661 None:intergenic 50.0%
!! GATGGTTTGGTGTCCATTGG+TGG + chr6_3:12463647-12463666 Msa0940220:CDS 50.0%
!! TTTGGTGTCCATTGGTGGAC+TGG + chr6_3:12463652-12463671 Msa0940220:CDS 50.0%
GAAGCCGCGTCAGTAATGAT+TGG - chr6_3:12464265-12464284 None:intergenic 50.0%
ATTCACCGTAGTTCCTGTGC+TGG + chr6_3:12464297-12464316 Msa0940220:CDS 50.0%
GAGGATTCCTCATGGATGCA+TGG + chr6_3:12465058-12465077 Msa0940220:CDS 50.0%
! TGGGACCTTTTCCAGTTCAC+TGG + chr6_3:12465427-12465446 Msa0940220:CDS 50.0%
TACTTCAGAGTGACTGCAGC+TGG - chr6_3:12465487-12465506 None:intergenic 50.0%
! GGCAGTCTTGTCAAATGCTG+TGG + chr6_3:12465826-12465845 Msa0940220:CDS 50.0%
GCCTGCCTGTGTGAAGAAGT+TGG + chr6_3:12462885-12462904 Msa0940220:CDS 55.0%
CCCAACTTCTTCACACAGGC+AGG - chr6_3:12462889-12462908 None:intergenic 55.0%
AAGAAGTTGGGGATGGTGCC+TGG + chr6_3:12462898-12462917 Msa0940220:CDS 55.0%
! GGGGATGCCTTTGGGAGATA+TGG + chr6_3:12463024-12463043 Msa0940220:CDS 55.0%
ATGTACGGCCAGTCCACCAA+TGG - chr6_3:12463663-12463682 None:intergenic 55.0%
GGTCACCAGCACAGGAACTA+CGG - chr6_3:12464305-12464324 None:intergenic 55.0%
ATGTAAGCGGTCACCAGCAC+AGG - chr6_3:12464313-12464332 None:intergenic 55.0%
TCTGCACCAATAGTCCGACC+TGG + chr6_3:12464590-12464609 Msa0940220:intron 55.0%
CTGCACCAATAGTCCGACCT+GGG + chr6_3:12464591-12464610 Msa0940220:intron 55.0%
AGCTATCTAGGTCCGCCTGT+TGG + chr6_3:12464960-12464979 Msa0940220:intron 55.0%
GCGCACACAATACAACCACC+AGG - chr6_3:12465002-12465021 None:intergenic 55.0%
CAGCAGTTGCTCCAGTGAAC+TGG - chr6_3:12465441-12465460 None:intergenic 55.0%
GCCTGCCTGTGTGAAGAAGT+TGG + chr6_3:12462885-12462904 Msa0940220:CDS 55.0%
CCCAACTTCTTCACACAGGC+AGG - chr6_3:12462889-12462908 None:intergenic 55.0%
AAGAAGTTGGGGATGGTGCC+TGG + chr6_3:12462898-12462917 Msa0940220:CDS 55.0%
! GGGGATGCCTTTGGGAGATA+TGG + chr6_3:12463024-12463043 Msa0940220:CDS 55.0%
ATGTACGGCCAGTCCACCAA+TGG - chr6_3:12463663-12463682 None:intergenic 55.0%
GGTCACCAGCACAGGAACTA+CGG - chr6_3:12464305-12464324 None:intergenic 55.0%
ATGTAAGCGGTCACCAGCAC+AGG - chr6_3:12464313-12464332 None:intergenic 55.0%
TCTGCACCAATAGTCCGACC+TGG + chr6_3:12464590-12464609 Msa0940220:intron 55.0%
CTGCACCAATAGTCCGACCT+GGG + chr6_3:12464591-12464610 Msa0940220:intron 55.0%
AGCTATCTAGGTCCGCCTGT+TGG + chr6_3:12464960-12464979 Msa0940220:intron 55.0%
GCGCACACAATACAACCACC+AGG - chr6_3:12465002-12465021 None:intergenic 55.0%
CAGCAGTTGCTCCAGTGAAC+TGG - chr6_3:12465441-12465460 None:intergenic 55.0%
CACGACGCCATGCATCCATG+AGG - chr6_3:12465068-12465087 None:intergenic 60.0%
CACGACGCCATGCATCCATG+AGG - chr6_3:12465068-12465087 None:intergenic 60.0%
GCAGGCCCAGGTCGGACTAT+TGG - chr6_3:12464599-12464618 None:intergenic 65.0%
GCAGGCCCAGGTCGGACTAT+TGG - chr6_3:12464599-12464618 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 12462412 12466384 12462412 ID=Msa0940220;Name=Msa0940220
chr6_3 mRNA 12462412 12466384 12462412 ID=Msa0940220-mRNA-1;Parent=Msa0940220;Name=Msa0940220-mRNA-1;_AED=0.09;_eAED=0.09;_QI=66|1|1|1|0.8|0.66|6|468|467
chr6_3 exon 12462412 12462427 12462412 ID=Msa0940220-mRNA-1:exon:4077;Parent=Msa0940220-mRNA-1
chr6_3 exon 12462641 12463117 12462641 ID=Msa0940220-mRNA-1:exon:4078;Parent=Msa0940220-mRNA-1
chr6_3 exon 12463590 12463742 12463590 ID=Msa0940220-mRNA-1:exon:4079;Parent=Msa0940220-mRNA-1
chr6_3 exon 12464143 12464346 12464143 ID=Msa0940220-mRNA-1:exon:4080;Parent=Msa0940220-mRNA-1
chr6_3 exon 12465035 12465503 12465035 ID=Msa0940220-mRNA-1:exon:4081;Parent=Msa0940220-mRNA-1
chr6_3 exon 12465766 12466384 12465766 ID=Msa0940220-mRNA-1:exon:4082;Parent=Msa0940220-mRNA-1
chr6_3 five_prime_UTR 12462412 12462427 12462412 ID=Msa0940220-mRNA-1:five_prime_utr;Parent=Msa0940220-mRNA-1
chr6_3 five_prime_UTR 12462641 12462690 12462641 ID=Msa0940220-mRNA-1:five_prime_utr;Parent=Msa0940220-mRNA-1
chr6_3 CDS 12462691 12463117 12462691 ID=Msa0940220-mRNA-1:cds;Parent=Msa0940220-mRNA-1
chr6_3 CDS 12463590 12463742 12463590 ID=Msa0940220-mRNA-1:cds;Parent=Msa0940220-mRNA-1
chr6_3 CDS 12464143 12464346 12464143 ID=Msa0940220-mRNA-1:cds;Parent=Msa0940220-mRNA-1
chr6_3 CDS 12465035 12465503 12465035 ID=Msa0940220-mRNA-1:cds;Parent=Msa0940220-mRNA-1
chr6_3 CDS 12465766 12465916 12465766 ID=Msa0940220-mRNA-1:cds;Parent=Msa0940220-mRNA-1
chr6_3 three_prime_UTR 12465917 12466384 12465917 ID=Msa0940220-mRNA-1:three_prime_utr;Parent=Msa0940220-mRNA-1
Gene Sequence

>Msa0940220

ATGACAATTGAAACTATTGCACCTGAGAAGAAGAAGAAAACAAGGAAGAACAAGGAGGTTGTGGGCGAGAATGCGCCTTTGTTACCTAAGTCTCAAGAAACCGATGTCGAGTTACATGAATTTAATGGAGCTTCATTTTCAGGAGCTGTTTTCAATTTATCGACAACAGTTATCGGTGCTGGAATCATGGGCTTGCCTGCCTGTGTGAAGAAGTTGGGGATGGTGCCTGGTCTTATTGCTATAGTCCTAACAGCATTTTTGACAGAGAAGTCAGTTGAATTCATGCTCAGGTTTTCAAGGGCAGGGAATCTTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAGATATGGAAAAGCACTTTTAGAGATATGTGTTGTTATCAATAACGTTGGTGTTCTTATTGTCTACATGATTATTATTGGTGATGTGGTTTCTGGAACAACTTCAAGTGGAATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGCCGTACATTTGTTCTTACCTTTACAACACTTGCTGTGTTTGCACCTCTAGTCAGCTTTAAGCAAATTGATTCATTGAGATTCACATCTGCGTTATCAGTTGGATTAGCAGTTGTTTTCCTTATCATTGCTGTGGGAATTTCAATTATCAAGATTATCAGTGGAGGTATTGGGATGCCAAGACTCTTCCCAATCATTACTGACGCGGCTTCAGTTTTTGATCTATTCACCGTAGTTCCTGTGCTGGTGACCGCTTACATATGTCACTACAATGTTCACAACATAGATAATGAACTGGAGGATTCCTCATGGATGCATGGCGTCGTGCGTGCTTCCCTTACTCTATGCTCTTCAGTTTACTTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGTGACGATACTCTTTCTGATGTTCTTGCCAATTTCGATACTAATCTTGGAATTCCTTTTGGTTCTGCGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTCGTACTTGTATTTCCTGTAGTTTTCTATGCATTGAGGGTCAACATAGATGGTCTCATATTTACATCATCAAGAAGGCCTTTGGTCGTTGATAACTTCCGATTTGCGTCAATTACTATTGCGCTTGTCGGCATTATCTTCATGGGAGCAAACTTCATACCTAGCATTTGGGACCTTTTCCAGTTCACTGGAGCAACTGCTGCTGTTTGTTTAGGATTCATATTTCCAGCTGCAGTCACTCTGAAGGACCGCCACAACATAGCAACCAAAACGGACAAGATTTTTTCTGTCTTTATGATAGTTTTGGCAGTCTTGTCAAATGCTGTGGCTATATACAGTGATGCTTATGCTTTGATCAACAAGAATAAACAAAATATGAACGATTTCTTGATTTGA
Protein sequence

>Msa0940220

MTIETIAPEKKKKTRKNKEVVGENAPLLPKSQETDVELHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLIAIVLTAFLTEKSVEFMLRFSRAGNLSSYGSLMGDAFGRYGKALLEICVVINNVGVLIVYMIIIGDVVSGTTSSGIHHSGILEGWFGVHWWTGRTFVLTFTTLAVFAPLVSFKQIDSLRFTSALSVGLAVVFLIIAVGISIIKIISGGIGMPRLFPIITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRASLTLCSSVYLLTSFFGFLLFGDDTLSDVLANFDTNLGIPFGSALNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFTSSRRPLVVDNFRFASITIALVGIIFMGANFIPSIWDLFQFTGATAAVCLGFIFPAAVTLKDRHNIATKTDKIFSVFMIVLAVLSNAVAIYSDAYALINKNKQNMNDFLI*