AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807030 MtrunA17_Chr5g0398181 98.288 292 1 2 1 288 1 292 0.0 584
Msa0807030 MtrunA17_Chr1g0149651 70.036 277 79 2 15 288 161 436 1.87e-137 395
Msa0807030 MtrunA17_Chr3g0137241 69.057 265 81 1 25 288 107 371 1.99e-133 382
Msa0807030 MtrunA17_Chr2g0305101 68.679 265 80 2 23 287 93 354 9.04e-131 375
Msa0807030 MtrunA17_Chr4g0065241 65.693 274 91 1 2 275 48 318 1.77e-129 371
Msa0807030 MtrunA17_Chr1g0192791 34.375 256 138 5 21 272 16 245 1.02e-32 121
Msa0807030 MtrunA17_Chr1g0151961 32.806 253 145 6 20 272 115 342 6.60e-30 116
Msa0807030 MtrunA17_Chr5g0413201 34.387 253 132 6 24 272 72 294 7.88e-29 112
Msa0807030 MtrunA17_Chr5g0439391 30.364 247 139 4 27 272 49 263 8.22e-24 98.2
Msa0807030 MtrunA17_Chr2g0289201 29.317 249 148 4 24 272 117 337 1.19e-23 99.0
Msa0807030 MtrunA17_Chr7g0240371 37.349 83 50 1 204 286 298 378 3.41e-11 63.5
Msa0807030 MtrunA17_Chr4g0028701 37.805 82 49 1 204 285 463 542 9.46e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807030 AT1G62990.1 79.181 293 52 4 1 287 1 290 2.38e-169 471
Msa0807030 AT5G25220.2 66.330 297 79 5 7 288 129 419 1.75e-135 390
Msa0807030 AT5G25220.1 66.216 296 79 5 7 287 129 418 1.11e-134 388
Msa0807030 AT5G11060.1 68.401 269 79 2 20 287 119 382 1.80e-132 381
Msa0807030 AT4G32040.2 61.592 289 94 6 12 288 96 379 1.26e-117 343
Msa0807030 AT4G32040.1 61.592 289 94 6 12 288 96 379 2.37e-117 342
Msa0807030 AT1G70510.1 33.597 253 132 5 24 272 69 289 2.92e-33 124
Msa0807030 AT1G70510.2 32.411 253 139 4 24 272 69 293 3.36e-32 121
Msa0807030 AT1G23380.1 34.800 250 133 6 24 272 85 305 3.37e-32 121
Msa0807030 AT1G23380.2 34.524 252 133 7 24 272 85 307 2.60e-30 116
Msa0807030 AT4G08150.1 30.588 255 143 7 24 272 134 360 1.99e-27 110
Msa0807030 AT1G62360.1 29.317 249 150 4 24 272 121 343 2.16e-22 95.9

Find 85 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGGTTGCTGTATATTTC+TGG 0.161598 5_3:-27784545 Msa0807030:three_prime_UTR
TGTTCTCTGTTGTTATTATT+AGG 0.236036 5_3:-27784498 Msa0807030:three_prime_UTR
TAGATATTATTATGGTTAAT+TGG 0.244390 5_3:-27784607 Msa0807030:three_prime_UTR
GTGGAATAGTATTATATTAT+AGG 0.247300 5_3:+27788889 None:intergenic
TGGAATAGTATTATATTATA+GGG 0.285356 5_3:+27788890 None:intergenic
ATTTATTTCAGGAGTGAGTT+TGG 0.300536 5_3:-27785607 Msa0807030:intron
AGTCAAGAATTGAAGATGTA+AGG 0.320951 5_3:-27785288 Msa0807030:CDS
TCATGCTGTTGAAGCTGTTA+TGG 0.321045 5_3:-27787978 Msa0807030:CDS
GAACAATTGCAGATGGATTA+TGG 0.322505 5_3:-27785546 Msa0807030:CDS
AATAATAGTAGATATTATTA+TGG 0.322689 5_3:-27784615 Msa0807030:three_prime_UTR
AGCTGAAGCAAATCAATAAT+TGG 0.323659 5_3:-27784867 Msa0807030:CDS
AAGTTGGTAGTATTAATTAA+AGG 0.332442 5_3:+27788702 None:intergenic
ATGTAAGGGAGGAAATATTA+AGG 0.375793 5_3:-27785273 Msa0807030:CDS
TTTATTTCAGGAGTGAGTTT+GGG 0.389051 5_3:-27785606 Msa0807030:intron
TGTGTTACCAGCTGGTAATT+AGG 0.392076 5_3:+27784731 None:intergenic
TCTACTATTATTATATCTCT+TGG 0.413043 5_3:+27784626 None:intergenic
AAGAAGAGCTGGAAAATTAC+CGG 0.413561 5_3:-27785248 Msa0807030:CDS
TTAATCAAAGGAAAAGAAAC+TGG 0.420427 5_3:-27784840 Msa0807030:CDS
GATTGATGTATTGTTATTAT+CGG 0.424127 5_3:+27788849 None:intergenic
ATCAATGGTAACTGATCTAT+AGG 0.425631 5_3:+27788519 None:intergenic
GGGATGATGCACGGTGGTTA+CGG 0.430293 5_3:-27788648 Msa0807030:CDS
TATACCTGTGAGGGCTTGTA+AGG 0.438851 5_3:+27787934 None:intergenic
CAACTTCAGTCTTAAAGAAC+TGG 0.439479 5_3:-27785219 Msa0807030:CDS
ACTCAAAATTGAGCTCAAAC+AGG 0.454282 5_3:-27785418 Msa0807030:intron
TATCTCTTGGTGCATCTCAC+TGG 0.459765 5_3:+27784639 None:intergenic
GTCAAGAATTGAAGATGTAA+GGG 0.466928 5_3:-27785287 Msa0807030:CDS
GTGAGTTTGGGAGAAGGAAG+TGG 0.468312 5_3:-27785594 Msa0807030:CDS
TTAGGTGTGGTAAGGTTGGT+TGG 0.468370 5_3:-27784480 Msa0807030:three_prime_UTR
TCAGGAGTGAGTTTGGGAGA+AGG 0.470466 5_3:-27785600 Msa0807030:intron
GAAATGCAAGAACCAAGCTT+AGG 0.481189 5_3:-27788669 Msa0807030:CDS
CTCTTGGTGCATCTCACTGG+TGG 0.481516 5_3:+27784642 None:intergenic
ATTATTAGGTGTGGTAAGGT+TGG 0.483160 5_3:-27784484 Msa0807030:three_prime_UTR
TCTGTTGTTATTATTAGGTG+TGG 0.498684 5_3:-27784493 Msa0807030:three_prime_UTR
CACGGTGGTTACGGTGGAGA+TGG 0.501187 5_3:-27788639 Msa0807030:CDS
GGTGTGTTGTGTTGTGTTTG+TGG 0.501391 5_3:+27788870 None:intergenic
GCAAAACTTGTGGAGGAGAC+AGG 0.501622 5_3:-27784895 Msa0807030:CDS
TGTTATTATTAGGTGTGGTA+AGG 0.510425 5_3:-27784488 Msa0807030:three_prime_UTR
GATAACTGAGCATCAATCAA+TGG 0.510534 5_3:+27788504 None:intergenic
AAATGCAAGAACCAAGCTTA+GGG 0.512228 5_3:-27788668 Msa0807030:CDS
ATCTTTGTTTCTATCAGAAG+TGG 0.513108 5_3:-27788935 Msa0807030:five_prime_UTR
TCTTGGTGCATCTCACTGGT+GGG 0.521682 5_3:+27784643 None:intergenic
TCAGATTCCGTAGGAAGTAA+TGG 0.522855 5_3:+27785471 None:intergenic
CTTGCGTTTCGACTTCAAAG+AGG 0.527244 5_3:+27784795 None:intergenic
AATTAACATACAGTTGGGTA+AGG 0.529902 5_3:+27785175 None:intergenic
AGTGATGGATGGGGTTGAAG+AGG 0.537701 5_3:+27788732 None:intergenic
CTGGCACAGTAATTCTCAAT+CGG 0.541137 5_3:-27784821 Msa0807030:CDS
GATAATCAGTCAAGTGGTGG+TGG 0.544388 5_3:-27785519 Msa0807030:CDS
GATCATGACATGATGGGACT+TGG 0.548603 5_3:-27785495 Msa0807030:CDS
ATATTAAGGAAAAGAAGAGC+TGG 0.550111 5_3:-27785259 Msa0807030:CDS
ATAATTGGTTCATTAATCAA+AGG 0.552236 5_3:-27784852 Msa0807030:CDS
ACTTGGTCCATTACTTCCTA+CGG 0.552428 5_3:-27785478 Msa0807030:CDS
TATAGTTGTGTGTTACCAGC+TGG 0.555681 5_3:+27784723 None:intergenic
GGTGGTTACGGTGGAGATGG+TGG 0.568036 5_3:-27788636 Msa0807030:CDS
TGGTGGTGATCATGACATGA+TGG 0.573965 5_3:-27785502 Msa0807030:CDS
GGAATCTGAGAGGTCACTCA+TGG 0.575291 5_3:-27785457 Msa0807030:CDS
AAGAATTGAAGATGTAAGGG+AGG 0.579355 5_3:-27785284 Msa0807030:CDS
AGGAAGTGGTGCGACAATGT+CGG 0.581478 5_3:-27785580 Msa0807030:CDS
TTTACATGCGCAGAGAAAGA+GGG 0.587066 5_3:+27788958 None:intergenic
CGGTGAGAACAGACAACTGA+AGG 0.590615 5_3:-27788613 Msa0807030:CDS
CATAGTAATATTCCTTCACC+AGG 0.593437 5_3:+27784405 None:intergenic
AAGACTGAAGTTGTGTCACC+CGG 0.596174 5_3:+27785229 None:intergenic
CCGTGCATCATCCCTAAGCT+TGG 0.606516 5_3:+27788657 None:intergenic
TGAAGATGAACAATTGCAGA+TGG 0.612178 5_3:-27785553 Msa0807030:CDS
TCGAGTTGTTGACGATCATG+AGG 0.612238 5_3:+27788426 None:intergenic
AATACCTTACAAGCCCTCAC+AGG 0.617490 5_3:-27787938 Msa0807030:intron
GGTTACGGTGGAGATGGTGG+CGG 0.617848 5_3:-27788633 Msa0807030:CDS
TCATATACTACTTTCTAGAG+TGG 0.619276 5_3:-27788779 Msa0807030:intron
CAGTGTACATATACCTGTGA+GGG 0.621411 5_3:+27787925 None:intergenic
CTTTGAAGTCGAAACGCAAG+AGG 0.621918 5_3:-27784792 Msa0807030:CDS
AGAAGAGCTGGAAAATTACC+GGG 0.627133 5_3:-27785247 Msa0807030:CDS
TGACAAAGCAAAACTTGTGG+AGG 0.628394 5_3:-27784902 Msa0807030:CDS
CTTCAGTCTTAAAGAACTGG+TGG 0.629856 5_3:-27785216 Msa0807030:CDS
GACAGAAGCTGTTCATACAA+AGG 0.633295 5_3:+27788573 None:intergenic
GGTCTAGATAATCAGTCAAG+TGG 0.641451 5_3:-27785525 Msa0807030:CDS
GGTGGTGATCATGACATGAT+GGG 0.646696 5_3:-27785501 Msa0807030:CDS
ATGATGCACGGTGGTTACGG+TGG 0.647600 5_3:-27788645 Msa0807030:CDS
CTAGATAATCAGTCAAGTGG+TGG 0.656919 5_3:-27785522 Msa0807030:CDS
AGTGACCTCTCAGATTCCGT+AGG 0.660085 5_3:+27785462 None:intergenic
TGAGAACAGACAACTGAAGG+CGG 0.661001 5_3:-27788610 Msa0807030:CDS
AGATGACAAAGCAAAACTTG+TGG 0.663448 5_3:-27784905 Msa0807030:CDS
GGTGGCAGCAACATGCAAAG+TGG 0.673948 5_3:-27785198 Msa0807030:CDS
TACTTCCTACGGAATCTGAG+AGG 0.681932 5_3:-27785467 Msa0807030:CDS
GCAGTGTACATATACCTGTG+AGG 0.695254 5_3:+27787924 None:intergenic
CCAAGCTTAGGGATGATGCA+CGG 0.704488 5_3:-27788657 Msa0807030:CDS
AGCTTAGGGATGATGCACGG+TGG 0.759363 5_3:-27788654 Msa0807030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTTAATTTTTTATTA+TGG - chr5_3:27785618-27785637 Msa0807030:intron 0.0%
!! ATTAATTAATTAATGTAATC+CGG - chr5_3:27785977-27785996 Msa0807030:intron 10.0%
!! AATAATAGTAGATATTATTA+TGG - chr5_3:27788792-27788811 Msa0807030:intron 10.0%
!! TGGAATAGTATTATATTATA+GGG + chr5_3:27784520-27784539 None:intergenic 15.0%
!! ATTTAACAAATCAATTAAAG+TGG + chr5_3:27785287-27785306 None:intergenic 15.0%
!! GATTTATCAAACAATAAAAT+GGG + chr5_3:27787353-27787372 None:intergenic 15.0%
!! TGATTTATCAAACAATAAAA+TGG + chr5_3:27787354-27787373 None:intergenic 15.0%
!! CATTAGAAATAATTATACAT+GGG + chr5_3:27787396-27787415 None:intergenic 15.0%
!! TCATTAGAAATAATTATACA+TGG + chr5_3:27787397-27787416 None:intergenic 15.0%
!! TAGATATTATTATGGTTAAT+TGG - chr5_3:27788800-27788819 Msa0807030:intron 15.0%
!! GTGGAATAGTATTATATTAT+AGG + chr5_3:27784521-27784540 None:intergenic 20.0%
!!! GATTGATGTATTGTTATTAT+CGG + chr5_3:27784561-27784580 None:intergenic 20.0%
!!! AAGTTGGTAGTATTAATTAA+AGG + chr5_3:27784708-27784727 None:intergenic 20.0%
!! ATGTATTTATTTGATCTTAC+CGG - chr5_3:27785059-27785078 Msa0807030:intron 20.0%
!!! AACTAATTTGTCATATATGT+TGG - chr5_3:27785331-27785350 Msa0807030:intron 20.0%
!! ATAAGTTATGAAAAAACTTG+TGG - chr5_3:27785574-27785593 Msa0807030:CDS 20.0%
!!! TTTACTTGCACTTATTTTAT+TGG - chr5_3:27785706-27785725 Msa0807030:intron 20.0%
!!! TTGTTTTCTATGTTCATTTT+AGG - chr5_3:27785741-27785760 Msa0807030:intron 20.0%
!! TCACTATATTAATCTCTTAT+AGG - chr5_3:27785795-27785814 Msa0807030:intron 20.0%
!! ATATTAATCTCTTATAGGTT+AGG - chr5_3:27785800-27785819 Msa0807030:intron 20.0%
!!! TATTCTTCTAAAGCTATTTT+TGG - chr5_3:27785900-27785919 Msa0807030:intron 20.0%
!! GTATACACAAATTAATTAGT+TGG - chr5_3:27786005-27786024 Msa0807030:intron 20.0%
!! AACAAGATTATAATAGTTGT+TGG + chr5_3:27786114-27786133 None:intergenic 20.0%
!! CAACTATTATAATCTTGTTA+TGG - chr5_3:27786115-27786134 Msa0807030:intron 20.0%
!!! ATTATAATCTTGTTATGGAA+AGG - chr5_3:27786120-27786139 Msa0807030:intron 20.0%
!!! AGGAAAATTCTGAAATTAAT+AGG + chr5_3:27786209-27786228 None:intergenic 20.0%
!!! CTTTTTAAAAAAAGTTGTGT+TGG - chr5_3:27786510-27786529 Msa0807030:intron 20.0%
!! AAGAACTTGTAAATAACTTT+AGG + chr5_3:27786550-27786569 None:intergenic 20.0%
!! ATATTTGCATAGAACAATTA+AGG - chr5_3:27786603-27786622 Msa0807030:intron 20.0%
!! ACAATCTAAAAGATGTATTT+AGG + chr5_3:27786738-27786757 None:intergenic 20.0%
!!! AAATACATCTTTTAGATTGT+CGG - chr5_3:27786738-27786757 Msa0807030:intron 20.0%
!! AAAGTAAAAAAACACTAAAC+TGG - chr5_3:27786865-27786884 Msa0807030:intron 20.0%
!! TTCCAAGATATAATTTCTTT+GGG - chr5_3:27786921-27786940 Msa0807030:intron 20.0%
!! TTTGATTAATTATGATGTAC+TGG - chr5_3:27786977-27786996 Msa0807030:intron 20.0%
!!! TAATTCAAAAAACATTGACT+AGG + chr5_3:27787095-27787114 None:intergenic 20.0%
!! TACATCTTAATCATACATAA+AGG + chr5_3:27787190-27787209 None:intergenic 20.0%
!! GTTATGATTAATTAGTTACA+AGG + chr5_3:27787468-27787487 None:intergenic 20.0%
!! ACTTATTTGAAGATTGTTTA+AGG + chr5_3:27787493-27787512 None:intergenic 20.0%
!! TTACATGGAATAAATATACA+TGG - chr5_3:27787542-27787561 Msa0807030:intron 20.0%
!!! ATTTCAGTTCAATTTTGTTT+AGG - chr5_3:27787641-27787660 Msa0807030:intron 20.0%
!!! CAAATTTTGACATCAAATTA+TGG + chr5_3:27787722-27787741 None:intergenic 20.0%
!! TTTGATGTCAAAATTTGATA+TGG - chr5_3:27787725-27787744 Msa0807030:intron 20.0%
!!! TGTAGTATTGAATTTATTTC+AGG - chr5_3:27787789-27787808 Msa0807030:intron 20.0%
!! GCATAATCTCATTTATTAAT+TGG + chr5_3:27788080-27788099 None:intergenic 20.0%
!!! AGATTATGCATTAATTTGTA+GGG - chr5_3:27788091-27788110 Msa0807030:intron 20.0%
!! AAGTTAATTAACATACAGTT+GGG + chr5_3:27788240-27788259 None:intergenic 20.0%
!! AAAGTTAATTAACATACAGT+TGG + chr5_3:27788241-27788260 None:intergenic 20.0%
!!! ATAATTGGTTCATTAATCAA+AGG - chr5_3:27788555-27788574 Msa0807030:CDS 20.0%
!! TCTACTATTATTATATCTCT+TGG + chr5_3:27788784-27788803 None:intergenic 20.0%
!!! TTTTTATTTCAAAAAAGAGC+TGG - chr5_3:27788845-27788864 Msa0807030:intron 20.0%
! ATTAAAGGAGAAAAAAGTGA+TGG + chr5_3:27784693-27784712 None:intergenic 25.0%
! CATTTCTCAAGAAAAAAAGT+TGG + chr5_3:27784724-27784743 None:intergenic 25.0%
!!! ACTTCCAAAACTCATTTTTT+TGG - chr5_3:27785168-27785187 Msa0807030:intron 25.0%
!!! TTTTTGGTGTGATTAATTTG+AGG - chr5_3:27785184-27785203 Msa0807030:intron 25.0%
!! TAATTTGTCATATATGTTGG+TGG - chr5_3:27785334-27785353 Msa0807030:intron 25.0%
!!! GTAAGGTATTTTCAATATCA+CGG + chr5_3:27785459-27785478 None:intergenic 25.0%
!!! AAAAGAACTTTAAAGTGGTA+CGG + chr5_3:27785527-27785546 None:intergenic 25.0%
!! AGCTAAAAAGAACTTTAAAG+TGG + chr5_3:27785532-27785551 None:intergenic 25.0%
!! TAATTTGTGTATACTCTTTC+CGG + chr5_3:27785999-27786018 None:intergenic 25.0%
! AAGATTATAATAGTTGTTGG+CGG + chr5_3:27786111-27786130 None:intergenic 25.0%
! GCTAATTTAAATAAGCTGAT+TGG + chr5_3:27786160-27786179 None:intergenic 25.0%
!! TTTCAGAATTTTCCTACATA+TGG - chr5_3:27786214-27786233 Msa0807030:intron 25.0%
! ATAGACTAATTCTTCTAATC+GGG + chr5_3:27786263-27786282 None:intergenic 25.0%
! CATAGACTAATTCTTCTAAT+CGG + chr5_3:27786264-27786283 None:intergenic 25.0%
! TAATAATAACAGGAGACATT+TGG - chr5_3:27786319-27786338 Msa0807030:intron 25.0%
! AAAGATAATCCCAATATGTT+AGG - chr5_3:27786390-27786409 Msa0807030:intron 25.0%
!! ATATATACCCTTTTACTGTT+AGG - chr5_3:27786458-27786477 Msa0807030:intron 25.0%
! CTTCCAAGATATAATTTCTT+TGG - chr5_3:27786920-27786939 Msa0807030:intron 25.0%
! TCCAAGATATAATTTCTTTG+GGG - chr5_3:27786922-27786941 Msa0807030:intron 25.0%
! CTTAATCATACATAAAGGAA+AGG + chr5_3:27787185-27787204 None:intergenic 25.0%
! TGATTAATTAGTTACAAGGA+CGG + chr5_3:27787464-27787483 None:intergenic 25.0%
!!! AATTTCCCTTAGTTTTGTTT+CGG - chr5_3:27787694-27787713 Msa0807030:intron 25.0%
!!! GAGATTATGCATTAATTTGT+AGG - chr5_3:27788090-27788109 Msa0807030:intron 25.0%
! AACTAATCTGGTTAATATCA+CGG - chr5_3:27788468-27788487 Msa0807030:CDS 25.0%
! TTAATCAAAGGAAAAGAAAC+TGG - chr5_3:27788567-27788586 Msa0807030:CDS 25.0%
!! TGTTCTCTGTTGTTATTATT+AGG - chr5_3:27788909-27788928 Msa0807030:five_prime_UTR 25.0%
!! ATCTTTGTTTCTATCAGAAG+TGG - chr5_3:27784472-27784491 Msa0807030:three_prime_UTR 30.0%
! TCATATACTACTTTCTAGAG+TGG - chr5_3:27784628-27784647 Msa0807030:three_prime_UTR 30.0%
ATCAATGGTAACTGATCTAT+AGG + chr5_3:27784891-27784910 None:intergenic 30.0%
! CACACCAAAAAAATGAGTTT+TGG + chr5_3:27785175-27785194 None:intergenic 30.0%
TTGAGGCTTAGTAAAATTCA+TGG - chr5_3:27785201-27785220 Msa0807030:CDS 30.0%
TAGTAAAATTCATGGCTTTC+TGG - chr5_3:27785209-27785228 Msa0807030:CDS 30.0%
ACTGTTTATCCAAACAACTT+CGG - chr5_3:27785671-27785690 Msa0807030:intron 30.0%
ATTATAACACCGAAGTTGTT+TGG + chr5_3:27785683-27785702 None:intergenic 30.0%
!!! TCTTCTAAAGCTATTTTTGG+TGG - chr5_3:27785903-27785922 Msa0807030:intron 30.0%
!!! AAGCTATTTTTGGTGGATTT+TGG - chr5_3:27785910-27785929 Msa0807030:intron 30.0%
CAAACTAAACTCTTCCAAAT+TGG + chr5_3:27786042-27786061 None:intergenic 30.0%
CAATTTGGAAGAGTTTAGTT+TGG - chr5_3:27786040-27786059 Msa0807030:intron 30.0%
!!! AGCTTACAGTTTTGATTTTG+TGG - chr5_3:27786431-27786450 Msa0807030:intron 30.0%
! TGTACACTAGTACGATTTTA+AGG + chr5_3:27786577-27786596 None:intergenic 30.0%
!! TAGCTGGAGTATGTTTTTAA+GGG - chr5_3:27786676-27786695 Msa0807030:intron 30.0%
CGGTGAATTTAACATAATCA+CGG - chr5_3:27786758-27786777 Msa0807030:intron 30.0%
TTCTCATAGTACGAAAAGAA+TGG + chr5_3:27786828-27786847 None:intergenic 30.0%
TAATTTGAAGACGTCCAAAA+GGG + chr5_3:27787046-27787065 None:intergenic 30.0%
ATAATTTGAAGACGTCCAAA+AGG + chr5_3:27787047-27787066 None:intergenic 30.0%
CCAACTGAAATAATTAGTGA+AGG + chr5_3:27787072-27787091 None:intergenic 30.0%
CCTTCACTAATTATTTCAGT+TGG - chr5_3:27787069-27787088 Msa0807030:intron 30.0%
TCTAATGAGAAATTGCAAAG+TGG - chr5_3:27787409-27787428 Msa0807030:intron 30.0%
CAGTTACACTCATATTTACA+TGG - chr5_3:27787527-27787546 Msa0807030:intron 30.0%
ATAATATGCTTGCATGCATA+TGG + chr5_3:27787619-27787638 None:intergenic 30.0%
ATTTATTTCAGGAGTGAGTT+TGG - chr5_3:27787800-27787819 Msa0807030:intron 30.0%
TTTATTTCAGGAGTGAGTTT+GGG - chr5_3:27787801-27787820 Msa0807030:intron 30.0%
AGTCAAGAATTGAAGATGTA+AGG - chr5_3:27788119-27788138 Msa0807030:intron 30.0%
GTCAAGAATTGAAGATGTAA+GGG - chr5_3:27788120-27788139 Msa0807030:intron 30.0%
ATGTAAGGGAGGAAATATTA+AGG - chr5_3:27788134-27788153 Msa0807030:intron 30.0%
ATATTAAGGAAAAGAAGAGC+TGG - chr5_3:27788148-27788167 Msa0807030:intron 30.0%
AATTAACATACAGTTGGGTA+AGG + chr5_3:27788235-27788254 None:intergenic 30.0%
! AATTTTATCTTCTCCGAAAC+TGG + chr5_3:27788317-27788336 None:intergenic 30.0%
ATTCTTTGTAAATCAGTGTC+GGG + chr5_3:27788369-27788388 None:intergenic 30.0%
GATTCTTTGTAAATCAGTGT+CGG + chr5_3:27788370-27788389 None:intergenic 30.0%
GAATGAATCTTGTGTGTATT+TGG + chr5_3:27788392-27788411 None:intergenic 30.0%
AGCTGAAGCAAATCAATAAT+TGG - chr5_3:27788540-27788559 Msa0807030:CDS 30.0%
! TCTGTTGTTATTATTAGGTG+TGG - chr5_3:27788914-27788933 Msa0807030:five_prime_UTR 30.0%
TGTTATTATTAGGTGTGGTA+AGG - chr5_3:27788919-27788938 Msa0807030:five_prime_UTR 30.0%
AAGCAAAGAAAAGCAGTATC+TGG + chr5_3:27784583-27784602 None:intergenic 35.0%
AAAAAACAGAGTTGAGGTTG+AGG + chr5_3:27784655-27784674 None:intergenic 35.0%
AAGAGGAAAAAACAGAGTTG+AGG + chr5_3:27784661-27784680 None:intergenic 35.0%
!! AGGAGAAAAAAGTGATGGAT+GGG + chr5_3:27784688-27784707 None:intergenic 35.0%
! AAGGAGAAAAAAGTGATGGA+TGG + chr5_3:27784689-27784708 None:intergenic 35.0%
AAATGCAAGAACCAAGCTTA+GGG - chr5_3:27784739-27784758 Msa0807030:three_prime_UTR 35.0%
GATAACTGAGCATCAATCAA+TGG + chr5_3:27784906-27784925 None:intergenic 35.0%
ATGTGTCAACAAAACTTGAC+CGG + chr5_3:27785081-27785100 None:intergenic 35.0%
! CTTTATTTGTGCCAACAAAG+AGG - chr5_3:27785232-27785251 Msa0807030:CDS 35.0%
TCCATCAAAATCCTCTTTGT+TGG + chr5_3:27785246-27785265 None:intergenic 35.0%
!! ACAAAGAGGATTTTGATGGA+TGG - chr5_3:27785246-27785265 Msa0807030:CDS 35.0%
!! CAAAGAGGATTTTGATGGAT+GGG - chr5_3:27785247-27785266 Msa0807030:CDS 35.0%
!! CATATATGTTGGTGGTTGTT+TGG - chr5_3:27785342-27785361 Msa0807030:intron 35.0%
! GTTAGGCATATGTTGTTGTT+TGG - chr5_3:27785817-27785836 Msa0807030:intron 35.0%
!! GCATATGTTGTTGTTTGGTT+TGG - chr5_3:27785822-27785841 Msa0807030:intron 35.0%
!! TATGTTGTTGTTTGGTTTGG+TGG - chr5_3:27785825-27785844 Msa0807030:intron 35.0%
!! ATGTTGTTGTTTGGTTTGGT+GGG - chr5_3:27785826-27785845 Msa0807030:intron 35.0%
TTTGGCTAATCTGAAGAAAG+TGG - chr5_3:27785928-27785947 Msa0807030:intron 35.0%
TTGGCTAATCTGAAGAAAGT+GGG - chr5_3:27785929-27785948 Msa0807030:intron 35.0%
TGGTTACATAGCAACCAATT+TGG - chr5_3:27786025-27786044 Msa0807030:intron 35.0%
!! TGGAAGAGTTTAGTTTGGTA+AGG - chr5_3:27786045-27786064 Msa0807030:intron 35.0%
AGTGTTCTACTTCCATATGT+AGG + chr5_3:27786229-27786248 None:intergenic 35.0%
ACTAATTCTTCTAATCGGGT+AGG + chr5_3:27786259-27786278 None:intergenic 35.0%
AATAACAGGAGACATTTGGA+AGG - chr5_3:27786323-27786342 Msa0807030:intron 35.0%
ATAACAGGAGACATTTGGAA+GGG - chr5_3:27786324-27786343 Msa0807030:intron 35.0%
GCACACAAACAATAGATATC+AGG + chr5_3:27786362-27786381 None:intergenic 35.0%
TATCTATTGTTTGTGTGCTG+TGG - chr5_3:27786364-27786383 Msa0807030:intron 35.0%
GACAGAAAGCCTAACATATT+GGG + chr5_3:27786402-27786421 None:intergenic 35.0%
TGACAGAAAGCCTAACATAT+TGG + chr5_3:27786403-27786422 None:intergenic 35.0%
CTAGTAGCCTAACAGTAAAA+GGG + chr5_3:27786468-27786487 None:intergenic 35.0%
! CTTTTACTGTTAGGCTACTA+GGG - chr5_3:27786467-27786486 Msa0807030:intron 35.0%
! TTTTACTGTTAGGCTACTAG+GGG - chr5_3:27786468-27786487 Msa0807030:intron 35.0%
TAAGGAATCAAGCATTACCT+TGG - chr5_3:27786621-27786640 Msa0807030:intron 35.0%
AAGCATTACCTTGGTTGAAT+AGG - chr5_3:27786630-27786649 Msa0807030:intron 35.0%
AGCATTACCTTGGTTGAATA+GGG - chr5_3:27786631-27786650 Msa0807030:intron 35.0%
CTTAAAAACATACTCCAGCT+AGG + chr5_3:27786677-27786696 None:intergenic 35.0%
!! CTAGCTGGAGTATGTTTTTA+AGG - chr5_3:27786675-27786694 Msa0807030:intron 35.0%
TTCGTACTATGAGAAATGCT+AGG - chr5_3:27786833-27786852 Msa0807030:intron 35.0%
!! GAAGTTGATGCTATAAGGAA+TGG + chr5_3:27786904-27786923 None:intergenic 35.0%
!! TCTTGGAAGTTGATGCTATA+AGG + chr5_3:27786909-27786928 None:intergenic 35.0%
GCCCCAAAGAAATTATATCT+TGG + chr5_3:27786926-27786945 None:intergenic 35.0%
! TTATGATGTACTGGTATCCA+TGG - chr5_3:27786986-27787005 Msa0807030:intron 35.0%
GTATCCATGGCTATTTAAGT+AGG - chr5_3:27786999-27787018 Msa0807030:intron 35.0%
TCATCCTACTTAAATAGCCA+TGG + chr5_3:27787006-27787025 None:intergenic 35.0%
ATGTCCATCATTGATGTTGT+TGG - chr5_3:27787144-27787163 Msa0807030:intron 35.0%
TATCCACATCCACTAACATA+AGG - chr5_3:27787249-27787268 Msa0807030:intron 35.0%
ATCCACATCCACTAACATAA+GGG - chr5_3:27787250-27787269 Msa0807030:intron 35.0%
GAGAGCAATGTAGTTACATA+AGG + chr5_3:27787279-27787298 None:intergenic 35.0%
! TCATTTGGAAGTTTGAGACA+TGG + chr5_3:27787303-27787322 None:intergenic 35.0%
! GACATGAACAGCTTTTCATT+TGG + chr5_3:27787318-27787337 None:intergenic 35.0%
AATGAAAAGCTGTTCATGTC+TGG - chr5_3:27787318-27787337 Msa0807030:intron 35.0%
TGGAACCGAAACAAAACTAA+GGG + chr5_3:27787702-27787721 None:intergenic 35.0%
ATGGAACCGAAACAAAACTA+AGG + chr5_3:27787703-27787722 None:intergenic 35.0%
TGAAGATGAACAATTGCAGA+TGG - chr5_3:27787854-27787873 Msa0807030:intron 35.0%
!! GAACAATTGCAGATGGATTA+TGG - chr5_3:27787861-27787880 Msa0807030:intron 35.0%
ACTCAAAATTGAGCTCAAAC+AGG - chr5_3:27787989-27788008 Msa0807030:CDS 35.0%
AAGAATTGAAGATGTAAGGG+AGG - chr5_3:27788123-27788142 Msa0807030:intron 35.0%
AAGAAGAGCTGGAAAATTAC+CGG - chr5_3:27788159-27788178 Msa0807030:intron 35.0%
CAACTTCAGTCTTAAAGAAC+TGG - chr5_3:27788188-27788207 Msa0807030:intron 35.0%
AGAAATTACATGCAGAAGGA+AGG + chr5_3:27788264-27788283 None:intergenic 35.0%
GATCAGAAATTACATGCAGA+AGG + chr5_3:27788268-27788287 None:intergenic 35.0%
! CGTATGTTTAGTTCCAGTTT+CGG - chr5_3:27788301-27788320 Msa0807030:intron 35.0%
AAGCTTATTACGTATGTCGT+TGG + chr5_3:27788440-27788459 None:intergenic 35.0%
AGATGACAAAGCAAAACTTG+TGG - chr5_3:27788502-27788521 Msa0807030:CDS 35.0%
! TTTTGTTCCTAATTACCAGC+TGG - chr5_3:27788669-27788688 Msa0807030:CDS 35.0%
ATTATTAGGTGTGGTAAGGT+TGG - chr5_3:27788923-27788942 Msa0807030:five_prime_UTR 35.0%
CATAGTAATATTCCTTCACC+AGG + chr5_3:27789005-27789024 None:intergenic 35.0%
TTTACATGCGCAGAGAAAGA+GGG + chr5_3:27784452-27784471 None:intergenic 40.0%
! TTTTACATGCGCAGAGAAAG+AGG + chr5_3:27784453-27784472 None:intergenic 40.0%
!! GGAGAAAAAAGTGATGGATG+GGG + chr5_3:27784687-27784706 None:intergenic 40.0%
GAAATGCAAGAACCAAGCTT+AGG - chr5_3:27784738-27784757 Msa0807030:three_prime_UTR 40.0%
GACAGAAGCTGTTCATACAA+AGG + chr5_3:27784837-27784856 None:intergenic 40.0%
! GCCAACAAAGAGGATTTTGA+TGG - chr5_3:27785242-27785261 Msa0807030:CDS 40.0%
TCATGCTGTTGAAGCTGTTA+TGG - chr5_3:27785429-27785448 Msa0807030:CDS 40.0%
CAGTGTACATATACCTGTGA+GGG + chr5_3:27785485-27785504 None:intergenic 40.0%
!! AACTTTAAAGTGGTACGGAG+GGG + chr5_3:27785522-27785541 None:intergenic 40.0%
!! GAACTTTAAAGTGGTACGGA+GGG + chr5_3:27785523-27785542 None:intergenic 40.0%
!! AGAACTTTAAAGTGGTACGG+AGG + chr5_3:27785524-27785543 None:intergenic 40.0%
!! GGTTTGGTGGGTTAGATATT+TGG - chr5_3:27785838-27785857 Msa0807030:intron 40.0%
TGGCTAATCTGAAGAAAGTG+GGG - chr5_3:27785930-27785949 Msa0807030:intron 40.0%
GGTTTCATATCATGGTTGGA+GGG + chr5_3:27786090-27786109 None:intergenic 40.0%
TTGTTGGCGGTTTCATATCA+TGG + chr5_3:27786098-27786117 None:intergenic 40.0%
CCTAGTAGCCTAACAGTAAA+AGG + chr5_3:27786469-27786488 None:intergenic 40.0%
! CCTTTTACTGTTAGGCTACT+AGG - chr5_3:27786466-27786485 Msa0807030:intron 40.0%
TTACCTTGGTTGAATAGGGA+TGG - chr5_3:27786635-27786654 Msa0807030:intron 40.0%
!! AATTTCTTTGGGGCAATGCT+AGG - chr5_3:27786932-27786951 Msa0807030:intron 40.0%
! CGACATTTAACTGTCCCTTT+TGG - chr5_3:27787029-27787048 Msa0807030:intron 40.0%
GTTGCCAACAACATCAATGA+TGG + chr5_3:27787151-27787170 None:intergenic 40.0%
!! GATGATGGGGTCTCTAAATT+GGG + chr5_3:27787226-27787245 None:intergenic 40.0%
!! TGATGATGGGGTCTCTAAAT+TGG + chr5_3:27787227-27787246 None:intergenic 40.0%
! GATGTGGATACATGATGATG+GGG + chr5_3:27787239-27787258 None:intergenic 40.0%
GGATGTGGATACATGATGAT+GGG + chr5_3:27787240-27787259 None:intergenic 40.0%
TGGATGTGGATACATGATGA+TGG + chr5_3:27787241-27787260 None:intergenic 40.0%
TCCACATCCACTAACATAAG+GGG - chr5_3:27787251-27787270 Msa0807030:intron 40.0%
TTGCAAAGTGGAGCTTCAAT+AGG - chr5_3:27787421-27787440 Msa0807030:intron 40.0%
TGCAAAGTGGAGCTTCAATA+GGG - chr5_3:27787422-27787441 Msa0807030:intron 40.0%
GGTCTAGATAATCAGTCAAG+TGG - chr5_3:27787882-27787901 Msa0807030:intron 40.0%
CTAGATAATCAGTCAAGTGG+TGG - chr5_3:27787885-27787904 Msa0807030:intron 40.0%
ACTTGGTCCATTACTTCCTA+CGG - chr5_3:27787929-27787948 Msa0807030:intron 40.0%
TCAGATTCCGTAGGAAGTAA+TGG + chr5_3:27787939-27787958 None:intergenic 40.0%
AGAAGAGCTGGAAAATTACC+GGG - chr5_3:27788160-27788179 Msa0807030:intron 40.0%
CTTCAGTCTTAAAGAACTGG+TGG - chr5_3:27788191-27788210 Msa0807030:intron 40.0%
TCGGGCTCATTCAAAACTTT+AGG + chr5_3:27788351-27788370 None:intergenic 40.0%
! GCTTGTGTCACTAACTAATC+TGG - chr5_3:27788456-27788475 Msa0807030:CDS 40.0%
GTTAATATCACGGTTTGTGC+AGG - chr5_3:27788478-27788497 Msa0807030:CDS 40.0%
TGACAAAGCAAAACTTGTGG+AGG - chr5_3:27788505-27788524 Msa0807030:CDS 40.0%
CTGGCACAGTAATTCTCAAT+CGG - chr5_3:27788586-27788605 Msa0807030:CDS 40.0%
TGTGTTACCAGCTGGTAATT+AGG + chr5_3:27788679-27788698 None:intergenic 40.0%
TATAGTTGTGTGTTACCAGC+TGG + chr5_3:27788687-27788706 None:intergenic 40.0%
AGCTGGTTGCTGTATATTTC+TGG - chr5_3:27788862-27788881 Msa0807030:five_prime_UTR 40.0%
!! GTTTGTTACGTTTTCTGACC+TGG - chr5_3:27788984-27789003 Msa0807030:five_prime_UTR 40.0%
GGTGTGTTGTGTTGTGTTTG+TGG + chr5_3:27784540-27784559 None:intergenic 45.0%
TGAGAACAGACAACTGAAGG+CGG - chr5_3:27784797-27784816 Msa0807030:CDS 45.0%
! TCGAGTTGTTGACGATCATG+AGG + chr5_3:27784984-27785003 None:intergenic 45.0%
GAGAGTGAGTATTACGTACG+AGG + chr5_3:27785013-27785032 None:intergenic 45.0%
AATACCTTACAAGCCCTCAC+AGG - chr5_3:27785469-27785488 Msa0807030:CDS 45.0%
TATACCTGTGAGGGCTTGTA+AGG + chr5_3:27785476-27785495 None:intergenic 45.0%
GCAGTGTACATATACCTGTG+AGG + chr5_3:27785486-27785505 None:intergenic 45.0%
!! ACTTTAAAGTGGTACGGAGG+GGG + chr5_3:27785521-27785540 None:intergenic 45.0%
GGCTAATCTGAAGAAAGTGG+GGG - chr5_3:27785931-27785950 Msa0807030:intron 45.0%
GCTAATCTGAAGAAAGTGGG+GGG - chr5_3:27785932-27785951 Msa0807030:intron 45.0%
CTAATCTGAAGAAAGTGGGG+GGG - chr5_3:27785933-27785952 Msa0807030:intron 45.0%
CGGTTTCATATCATGGTTGG+AGG + chr5_3:27786091-27786110 None:intergenic 45.0%
TGGCGGTTTCATATCATGGT+TGG + chr5_3:27786094-27786113 None:intergenic 45.0%
! AGACATTTGGAAGGGTTGGT+TGG - chr5_3:27786332-27786351 Msa0807030:intron 45.0%
!! GACATTTGGAAGGGTTGGTT+GGG - chr5_3:27786333-27786352 Msa0807030:intron 45.0%
!!! CAGCTGTGTTTTAACCTAGC+TGG - chr5_3:27786660-27786679 Msa0807030:intron 45.0%
CCACATCCACTAACATAAGG+GGG - chr5_3:27787252-27787271 Msa0807030:intron 45.0%
TAAGGTCCCCCTTATGTTAG+TGG + chr5_3:27787261-27787280 None:intergenic 45.0%
GATAATCAGTCAAGTGGTGG+TGG - chr5_3:27787888-27787907 Msa0807030:intron 45.0%
! TGGTGGTGATCATGACATGA+TGG - chr5_3:27787905-27787924 Msa0807030:intron 45.0%
GGTGGTGATCATGACATGAT+GGG - chr5_3:27787906-27787925 Msa0807030:intron 45.0%
! GATCATGACATGATGGGACT+TGG - chr5_3:27787912-27787931 Msa0807030:intron 45.0%
TACTTCCTACGGAATCTGAG+AGG - chr5_3:27787940-27787959 Msa0807030:CDS 45.0%
AAGACTGAAGTTGTGTCACC+CGG + chr5_3:27788181-27788200 None:intergenic 45.0%
CTTGCGTTTCGACTTCAAAG+AGG + chr5_3:27788615-27788634 None:intergenic 45.0%
!! CTTTGAAGTCGAAACGCAAG+AGG - chr5_3:27788615-27788634 Msa0807030:CDS 45.0%
! TATCTCTTGGTGCATCTCAC+TGG + chr5_3:27788771-27788790 None:intergenic 45.0%
! TTAGGTGTGGTAAGGTTGGT+TGG - chr5_3:27788927-27788946 Msa0807030:five_prime_UTR 45.0%
! TACGTTTTCTGACCTGGTGA+AGG - chr5_3:27788990-27789009 Msa0807030:five_prime_UTR 45.0%
!!! AATTAAACAAATATTTTATT+TGG + chr5_3:27785772-27785791 None:intergenic 5.0%
!! CATTAATTAATTAATTAATT+AGG + chr5_3:27785972-27785991 None:intergenic 5.0%
!! TTAAAAATAATAATAATAAC+AGG - chr5_3:27786309-27786328 Msa0807030:intron 5.0%
!! AGTGATGGATGGGGTTGAAG+AGG + chr5_3:27784678-27784697 None:intergenic 50.0%
CCAAGCTTAGGGATGATGCA+CGG - chr5_3:27784750-27784769 Msa0807030:three_prime_UTR 50.0%
CGGTGAGAACAGACAACTGA+AGG - chr5_3:27784794-27784813 Msa0807030:CDS 50.0%
!! TGTTGGTGGTTGTTTGGTGC+AGG - chr5_3:27785348-27785367 Msa0807030:intron 50.0%
CAGGAGACATTTGGAAGGGT+TGG - chr5_3:27786328-27786347 Msa0807030:intron 50.0%
GCACCATCCCTATTCAACCA+AGG + chr5_3:27786641-27786660 None:intergenic 50.0%
! CCCCCTTATGTTAGTGGATG+TGG + chr5_3:27787255-27787274 None:intergenic 50.0%
AGTGGAGCTTCAATAGGGAC+TGG - chr5_3:27787427-27787446 Msa0807030:intron 50.0%
TCAGGAGTGAGTTTGGGAGA+AGG - chr5_3:27787807-27787826 Msa0807030:intron 50.0%
GTGAGTTTGGGAGAAGGAAG+TGG - chr5_3:27787813-27787832 Msa0807030:intron 50.0%
AGGAAGTGGTGCGACAATGT+CGG - chr5_3:27787827-27787846 Msa0807030:intron 50.0%
AGTGACCTCTCAGATTCCGT+AGG + chr5_3:27787948-27787967 None:intergenic 50.0%
GGAATCTGAGAGGTCACTCA+TGG - chr5_3:27787950-27787969 Msa0807030:CDS 50.0%
GCAAAACTTGTGGAGGAGAC+AGG - chr5_3:27788512-27788531 Msa0807030:CDS 50.0%
! TCTTGGTGCATCTCACTGGT+GGG + chr5_3:27788767-27788786 None:intergenic 50.0%
CCGTGCATCATCCCTAAGCT+TGG + chr5_3:27784753-27784772 None:intergenic 55.0%
AGCTTAGGGATGATGCACGG+TGG - chr5_3:27784753-27784772 Msa0807030:three_prime_UTR 55.0%
GGGATGATGCACGGTGGTTA+CGG - chr5_3:27784759-27784778 Msa0807030:three_prime_UTR 55.0%
ATGATGCACGGTGGTTACGG+TGG - chr5_3:27784762-27784781 Msa0807030:three_prime_UTR 55.0%
GGTACGGAGGGGGAGATATA+TGG + chr5_3:27785511-27785530 None:intergenic 55.0%
GGTGGCAGCAACATGCAAAG+TGG - chr5_3:27788209-27788228 Msa0807030:intron 55.0%
! CTCTTGGTGCATCTCACTGG+TGG + chr5_3:27788768-27788787 None:intergenic 55.0%
CACGGTGGTTACGGTGGAGA+TGG - chr5_3:27784768-27784787 Msa0807030:three_prime_UTR 60.0%
GGTGGTTACGGTGGAGATGG+TGG - chr5_3:27784771-27784790 Msa0807030:exon 60.0%
! GGTTACGGTGGAGATGGTGG+CGG - chr5_3:27784774-27784793 Msa0807030:exon 60.0%
CTGAAGAAAGTGGGGGGGTG+TGG - chr5_3:27785938-27785957 Msa0807030:intron 60.0%
! AGAAAGTGGGGGGGTGTGGT+AGG - chr5_3:27785942-27785961 Msa0807030:intron 60.0%
! GAAAGTGGGGGGGTGTGGTA+GGG - chr5_3:27785943-27785962 Msa0807030:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 27784389 27789040 27784389 ID=Msa0807030;Name=Msa0807030
chr5_3 mRNA 27784389 27789040 27784389 ID=Msa0807030-mRNA-1;Parent=Msa0807030;Name=Msa0807030-mRNA-1;_AED=0.10;_eAED=0.10;_QI=304|1|1|1|0.8|0.66|6|400|288
chr5_3 exon 27784389 27784929 27784389 ID=Msa0807030-mRNA-1:exon:9837;Parent=Msa0807030-mRNA-1
chr5_3 exon 27785186 27785317 27785186 ID=Msa0807030-mRNA-1:exon:9836;Parent=Msa0807030-mRNA-1
chr5_3 exon 27785419 27785618 27785419 ID=Msa0807030-mRNA-1:exon:9835;Parent=Msa0807030-mRNA-1
chr5_3 exon 27787939 27788059 27787939 ID=Msa0807030-mRNA-1:exon:9834;Parent=Msa0807030-mRNA-1
chr5_3 exon 27788416 27788797 27788416 ID=Msa0807030-mRNA-1:exon:9833;Parent=Msa0807030-mRNA-1
chr5_3 exon 27788846 27789040 27788846 ID=Msa0807030-mRNA-1:exon:9832;Parent=Msa0807030-mRNA-1
chr5_3 five_prime_UTR 27788846 27789040 27788846 ID=Msa0807030-mRNA-1:five_prime_utr;Parent=Msa0807030-mRNA-1
chr5_3 five_prime_UTR 27788689 27788797 27788689 ID=Msa0807030-mRNA-1:five_prime_utr;Parent=Msa0807030-mRNA-1
chr5_3 CDS 27788416 27788688 27788416 ID=Msa0807030-mRNA-1:cds;Parent=Msa0807030-mRNA-1
chr5_3 CDS 27787939 27788059 27787939 ID=Msa0807030-mRNA-1:cds;Parent=Msa0807030-mRNA-1
chr5_3 CDS 27785419 27785618 27785419 ID=Msa0807030-mRNA-1:cds;Parent=Msa0807030-mRNA-1
chr5_3 CDS 27785186 27785317 27785186 ID=Msa0807030-mRNA-1:cds;Parent=Msa0807030-mRNA-1
chr5_3 CDS 27784789 27784929 27784789 ID=Msa0807030-mRNA-1:cds;Parent=Msa0807030-mRNA-1
chr5_3 three_prime_UTR 27784389 27784788 27784389 ID=Msa0807030-mRNA-1:three_prime_utr;Parent=Msa0807030-mRNA-1
Gene Sequence

>Msa0807030

ATGCAAGAACCAAGCTTAGGGATGATGCACGGTGGTTACGGTGGAGATGGTGGCGGTGAGAACAGACAACTGAAGGCGGAGATAGCAACACATCCTTTGTATGAACAGCTTCTGTCTGCACATGTAGCATGTCTTCGTGTTGCTACTCCTATAGATCAGTTACCATTGATTGATGCTCAGTTATCTCAATCTCATCATCTTCTACGATCTTATATCTCTCAACAAACTCATTCTCTTTCTCCTCATGATCGTCAACAACTCGATAACTTCCTCGCACAATATTTGATAGTTTTGTGTACATTCAAAGAACAACTTCAGCAACATGTCAGAGTTCATGCTGTTGAAGCTGTTATGGCTTGCCGTGATATTGAAAATACCTTACAAGCCCTCACAGGAGTGAGTTTGGGAGAAGGAAGTGGTGCGACAATGTCGGATGATGAAGATGAACAATTGCAGATGGATTATGGTCTAGATAATCAGTCAAGTGGTGGTGGTGATCATGACATGATGGGACTTGGTCCATTACTTCCTACGGAATCTGAGAGGTCACTCATGGAAAGAGTTCGTCAAGAACTCAAAATTGAGCTCAAACAGGGTTTTAAGTCAAGAATTGAAGATGTAAGGGAGGAAATATTAAGGAAAAGAAGAGCTGGAAAATTACCGGGTGACACAACTTCAGTCTTAAAGAACTGGTGGCAGCAACATGCAAAGTGGCCTTACCCAACTGAAGATGACAAAGCAAAACTTGTGGAGGAGACAGGACTGCAGCTGAAGCAAATCAATAATTGGTTCATTAATCAAAGGAAAAGAAACTGGCACAGTAATTCTCAATCGGTCACCTCTTTGAAGTCGAAACGCAAGAGGTAG

Protein sequence

>Msa0807030

MQEPSLGMMHGGYGGDGGGENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSLSPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGSGATMSDDEDEQLQMDYGLDNQSSGGGDHDMMGLGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR*