AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0875050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0875050 MtrunA17_Chr6g0455911 96.767 464 14 1 1 464 1 463 0.0 899
Msa0875050 MtrunA17_Chr6g0455981 83.333 456 75 1 1 455 1 456 0.0 754
Msa0875050 MtrunA17_Chr6g0455951 80.667 450 86 1 7 456 11 459 0.0 726
Msa0875050 MtrunA17_Chr6g0455941 84.270 445 70 0 12 456 18 462 0.0 726
Msa0875050 MtrunA17_Chr7g0220531 76.629 445 103 1 14 458 22 465 0.0 714
Msa0875050 MtrunA17_Chr8g0366021 58.836 464 178 4 8 460 4 465 0.0 548
Msa0875050 MtrunA17_Chr6g0459871 78.445 283 57 1 174 456 37 315 9.74e-147 421
Msa0875050 MtrunA17_Chr5g0437961 46.083 434 225 4 19 451 3 428 2.71e-129 381
Msa0875050 MtrunA17_Chr5g0437951 44.213 432 235 3 23 449 11 441 2.30e-128 379
Msa0875050 MtrunA17_Chr8g0366001 62.963 270 99 1 191 460 4 272 6.99e-121 353
Msa0875050 MtrunA17_Chr2g0333321 45.476 420 221 4 39 455 73 487 1.75e-120 360
Msa0875050 MtrunA17_Chr3g0114351 43.508 439 238 4 19 455 8 438 1.98e-120 358
Msa0875050 MtrunA17_Chr8g0365971 52.604 192 77 2 15 192 11 202 2.61e-58 191
Msa0875050 MtrunA17_Chr8g0365991 46.286 175 79 4 12 175 8 178 4.79e-37 134
Msa0875050 MtrunA17_Chr3g0114341 41.818 110 58 2 19 128 6 109 1.05e-19 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0875050 AT3G30390.1 66.083 457 152 2 1 455 1 456 0.0 612
Msa0875050 AT3G30390.3 66.083 457 152 2 1 455 1 456 0.0 612
Msa0875050 AT3G30390.2 66.083 457 152 2 1 455 1 456 0.0 612
Msa0875050 AT5G38820.2 66.516 442 145 2 16 455 15 455 0.0 602
Msa0875050 AT5G38820.1 66.516 442 145 2 16 455 10 450 0.0 601
Msa0875050 AT5G38820.3 66.516 442 145 2 16 455 10 450 0.0 601
Msa0875050 AT3G56200.1 42.424 429 241 3 24 451 9 432 7.25e-116 347
Msa0875050 AT2G40420.1 43.953 430 237 4 21 449 6 432 1.31e-112 339
Msa0875050 AT1G80510.1 44.181 421 226 4 39 455 73 488 1.57e-106 325
Msa0875050 AT2G42005.1 21.739 460 285 14 6 447 4 406 2.68e-14 75.1
Msa0875050 AT2G41190.1 22.246 472 311 12 9 457 98 536 1.31e-11 67.0
Msa0875050 AT5G02180.1 24.434 442 293 16 23 454 137 547 2.64e-11 66.2
Msa0875050 AT5G02180.2 24.434 442 293 16 23 454 137 547 2.64e-11 66.2
Msa0875050 AT4G38250.1 20.905 464 289 13 4 437 6 421 8.33e-11 64.3

Find 120 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTGGGTTCCTCCTATT+TGG 0.167607 6_1:+11063138 Msa0875050:CDS
TTCTTCTTATGGAAGTCTTA+TGG 0.180179 6_1:+11060998 Msa0875050:CDS
ATTGTAGGTGATGTGGTTTC+TGG 0.191617 6_1:+11061579 Msa0875050:intron
ATTGTCTACATGATTATTAT+TGG 0.230979 6_1:+11061092 Msa0875050:CDS
ACCGAGTTACATGAATTTAA+TGG 0.246290 6_1:+11060792 Msa0875050:CDS
TCCAAGATTAGTATCGAAAT+TGG 0.250594 6_1:-11063187 None:intergenic
TACTTACTGACAAGCTTCTT+TGG 0.258900 6_1:+11063123 Msa0875050:CDS
CTAGTCAGCTTTAAGCAAAT+TGG 0.260064 6_1:+11061717 Msa0875050:CDS
GCGGGGAATCTTTCTTCTTA+TGG 0.271476 6_1:+11060987 Msa0875050:CDS
CACAAAACTGTATGTTTATA+CGG 0.282955 6_1:+11064113 Msa0875050:three_prime_UTR
ACTTGTTGGCCTTATCTTCA+TGG 0.298679 6_1:+11063386 Msa0875050:CDS
GCAACTGCTGCTGTTTGTTT+AGG 0.298977 6_1:+11063456 Msa0875050:CDS
TCTTCTTATGGAAGTCTTAT+GGG 0.299793 6_1:+11060999 Msa0875050:CDS
GCCAATTTCGATACTAATCT+TGG 0.305913 6_1:+11063186 Msa0875050:CDS
CCTGCTTGTGTTAAGAAGTT+GGG 0.318183 6_1:+11060882 Msa0875050:CDS
AGACAGAATCTTGTCCGTTT+TGG 0.325735 6_1:-11063750 None:intergenic
GTTCCTTTCATCTGAATGTA+TGG 0.327382 6_1:-11063902 None:intergenic
CAAACTTCATACCTAGCATT+TGG 0.329135 6_1:+11063412 Msa0875050:CDS
AATTTATCGACAACAGTTAT+CGG 0.330888 6_1:+11060840 Msa0875050:CDS
ACTTACTGACAAGCTTCTTT+GGG 0.334326 6_1:+11063124 Msa0875050:CDS
GGGGATGCCTTTGGGAGATA+TGG 0.338725 6_1:+11061020 Msa0875050:CDS
TCAAGTGGAATTCACCATTC+TGG 0.345896 6_1:+11061609 Msa0875050:CDS
TCATTTATGTTGTATTTGTC+GGG 0.349416 6_1:+11064165 Msa0875050:three_prime_UTR
GTCTGTCTTTATGATCGTTC+TGG 0.357296 6_1:+11063769 Msa0875050:CDS
ATCATTTATGTTGTATTTGT+CGG 0.359609 6_1:+11064164 Msa0875050:three_prime_UTR
TACCTCATCAAGAAGGCCTT+TGG 0.384258 6_1:+11063326 Msa0875050:CDS
AAAGAGTATCGTCACCAAAT+AGG 0.385051 6_1:-11063152 None:intergenic
ACTAATCTTGGAATTCCTTT+CGG 0.386156 6_1:+11063198 Msa0875050:CDS
AAGATTATCAGTGGAGGTAT+TGG 0.392485 6_1:+11062219 Msa0875050:CDS
TCAATTACTATTGCACTTGT+TGG 0.394018 6_1:+11063372 Msa0875050:CDS
CACCATTCTGGTATCCTTGA+AGG 0.400665 6_1:+11061621 Msa0875050:CDS
AGTTATCGGTGCTGGGATCA+TGG 0.401091 6_1:+11060854 Msa0875050:CDS
ATCATGGATTTGAAAATTTG+TGG 0.402365 6_1:+11064351 Msa0875050:three_prime_UTR
AATGTAAGAGAGGCATTTGT+TGG 0.405056 6_1:+11064233 Msa0875050:three_prime_UTR
GCCTGCTTGTGTTAAGAAGT+TGG 0.407995 6_1:+11060881 Msa0875050:CDS
CAGCAGTTGCTCCAGTGAAC+TGG 0.416309 6_1:-11063443 None:intergenic
GTATCGGTTTCTTGAGACTT+AGG 0.418283 6_1:-11060771 None:intergenic
AGATTATCAGTGGAGGTATT+GGG 0.418630 6_1:+11062220 Msa0875050:CDS
TTGAATGTGCTCTATTTCCC+TGG 0.423717 6_1:+11064194 Msa0875050:three_prime_UTR
TCGACAACAGTTATCGGTGC+TGG 0.424627 6_1:+11060846 Msa0875050:CDS
AAACTTCATACCTAGCATTT+GGG 0.432392 6_1:+11063413 Msa0875050:CDS
GGTATCCTTGAAGGATGGTT+TGG 0.437844 6_1:+11061630 Msa0875050:CDS
TTAATTGTACACAACATGTC+TGG 0.441138 6_1:+11064066 Msa0875050:three_prime_UTR
CTTGTTGGCCTTATCTTCAT+GGG 0.441926 6_1:+11063387 Msa0875050:CDS
CTTCTTATGGAAGTCTTATG+GGG 0.450418 6_1:+11061000 Msa0875050:CDS
TACTTCAGAGTGACTGCAGC+TGG 0.450710 6_1:-11063489 None:intergenic
TTTATCGAAGAGATGAATCC+AGG 0.456224 6_1:-11064212 None:intergenic
CAATAGTAATTGATGCAAAT+CGG 0.460320 6_1:-11063362 None:intergenic
AACAAGGTTGAACAAATTGC+AGG 0.461155 6_1:-11064028 None:intergenic
TTCACATCTGCGTTATCAGT+TGG 0.463087 6_1:+11062150 Msa0875050:CDS
TTGCTCCAGTGAACTGGAAA+AGG 0.467289 6_1:-11063437 None:intergenic
GCACTTGTCTGCATTATCAA+TGG 0.473504 6_1:+11064255 Msa0875050:three_prime_UTR
AAGGATGGTTTGGTGTCCAT+TGG 0.478302 6_1:+11061640 Msa0875050:CDS
GAAGCCGCGTCAGTAATGAT+TGG 0.478837 6_1:-11062258 None:intergenic
TTTGGTGTCCATTGGTGGAC+TGG 0.480677 6_1:+11061648 Msa0875050:CDS
GATGGTTTGGTGTCCATTGG+TGG 0.485337 6_1:+11061643 Msa0875050:CDS
GTCTGCATTATCAATGGCTA+AGG 0.491029 6_1:+11064261 Msa0875050:three_prime_UTR
ATGTAAGCGGTCACCAGCAC+AGG 0.492604 6_1:-11062306 None:intergenic
AAGAAGTTGGGGATGGTGCC+TGG 0.494093 6_1:+11060894 Msa0875050:CDS
AGTCAGTTGAATTCATGCTC+AGG 0.495549 6_1:+11060955 Msa0875050:CDS
CAGAGAAGAAGAAGAAAACA+AGG 0.497508 6_1:+11060709 Msa0875050:CDS
GGCAGTCTTGTCAAATGTTG+TGG 0.498381 6_1:+11063790 Msa0875050:CDS
CTCAATGCATAGAAAACTAC+AGG 0.499017 6_1:-11063279 None:intergenic
AAGCCGCGTCAGTAATGATT+GGG 0.499842 6_1:-11062257 None:intergenic
TCACAACATAGATAATGAAC+TGG 0.502876 6_1:+11063041 Msa0875050:CDS
GCATTGAGGGTTAACATAGA+TGG 0.509658 6_1:+11063294 Msa0875050:CDS
TGCTGTTGTGTATGAAAGAA+TGG 0.509869 6_1:+11064288 Msa0875050:three_prime_UTR
AAATTCCCACAGAAATGATA+AGG 0.509896 6_1:-11062188 None:intergenic
AAATTCATGTAACTCGGTAT+CGG 0.512885 6_1:-11060787 None:intergenic
GGACACCAAACCATCCTTCA+AGG 0.515087 6_1:-11061635 None:intergenic
GAAAGGAACATAATTTGCTA+TGG 0.523047 6_1:+11063916 Msa0875050:three_prime_UTR
GTTATCGGTGCTGGGATCAT+GGG 0.526938 6_1:+11060855 Msa0875050:CDS
TGTGTTGTTATCAATAATGT+TGG 0.530970 6_1:+11061062 Msa0875050:CDS
GATTTGATAGCTCACAGTAC+AGG 0.534418 6_1:+11063874 Msa0875050:exon
TGATCATATTGTAGGTGATG+TGG 0.535323 6_1:+11061572 Msa0875050:intron
AATCAACCCACCGAACCCTA+TGG 0.535805 6_1:-11063959 None:intergenic
CTGCTTGTGTTAAGAAGTTG+GGG 0.536145 6_1:+11060883 Msa0875050:CDS
ATTCACTGTAGTTCCTGTGC+TGG 0.540887 6_1:+11062293 Msa0875050:CDS
CCCAACTTCTTAACACAAGC+AGG 0.541524 6_1:-11060882 None:intergenic
GTAATGATTGGGAAGAGTCT+TGG 0.543523 6_1:-11062246 None:intergenic
CGACAACAGTTATCGGTGCT+GGG 0.544120 6_1:+11060847 Msa0875050:CDS
TTTCCATACATTCAGATGAA+AGG 0.546411 6_1:+11063899 Msa0875050:three_prime_UTR
AGGAAGAACAAGGAGGTTGT+CGG 0.553210 6_1:+11060729 Msa0875050:CDS
TGGAAAAGGTCCCAAATGCT+AGG 0.553360 6_1:-11063423 None:intergenic
AAACACAGCAAGTGTTGTAA+AGG 0.554610 6_1:-11061688 None:intergenic
ACACAACATAGCAACCAAAA+CGG 0.557113 6_1:+11063736 Msa0875050:CDS
TCAATTATCAAGATTATCAG+TGG 0.562076 6_1:+11062210 Msa0875050:CDS
AGTTTGCTCCCATGAAGATA+AGG 0.562847 6_1:-11063395 None:intergenic
GAAGAAAACAAGGAAGAACA+AGG 0.565028 6_1:+11060719 Msa0875050:CDS
TTCTTATGGAAGTCTTATGG+GGG 0.570914 6_1:+11061001 Msa0875050:CDS
ATTCTGGTATCCTTGAAGGA+TGG 0.574553 6_1:+11061625 Msa0875050:CDS
TAAAGGTAAGAACAAATGTA+CGG 0.575422 6_1:-11061671 None:intergenic
ATGTACGGCCAGTCCACCAA+TGG 0.578995 6_1:-11061656 None:intergenic
AACCAAAGGCCTTCTTGATG+AGG 0.582587 6_1:-11063328 None:intergenic
ATCCTTCAAGGATACCAGAA+TGG 0.584684 6_1:-11061623 None:intergenic
TCTTGAGACTTAGGTAACAA+AGG 0.586294 6_1:-11060762 None:intergenic
ATCGAAATTGGCAAGAACGT+CGG 0.589251 6_1:-11063175 None:intergenic
CATTTATGTTGTATTTGTCG+GGG 0.592028 6_1:+11064166 Msa0875050:three_prime_UTR
TCCATTAAATTCATGTAACT+CGG 0.594814 6_1:-11060793 None:intergenic
GTTTCTGGAACAACTTCAAG+TGG 0.596954 6_1:+11061594 Msa0875050:CDS
CTTCCCAATCATTACTGACG+CGG 0.600076 6_1:+11062254 Msa0875050:CDS
GAGTATCGTCACCAAATAGG+AGG 0.604720 6_1:-11063149 None:intergenic
TGATATTTACCTCATCAAGA+AGG 0.606884 6_1:+11063319 Msa0875050:CDS
CTCTTCGATAAATGTAAGAG+AGG 0.607866 6_1:+11064223 Msa0875050:three_prime_UTR
GAGGATTCCTCATCGATGCA+TGG 0.608173 6_1:+11063063 Msa0875050:CDS
TTGAAGAAAATTTGTACACA+TGG 0.608361 6_1:-11063992 None:intergenic
TTGTGTTAAGAAGTTGGGGA+TGG 0.615830 6_1:+11060887 Msa0875050:CDS
TCTGCATTATCAATGGCTAA+GGG 0.622627 6_1:+11064262 Msa0875050:three_prime_UTR
TTATCGAAGAGATGAATCCA+GGG 0.622804 6_1:-11064211 None:intergenic
CAACATAGATAATGAACTGG+AGG 0.626300 6_1:+11063044 Msa0875050:CDS
CGGAAGTTATCAACAACCAA+AGG 0.631267 6_1:-11063342 None:intergenic
ATTATCAAGATTATCAGTGG+AGG 0.632554 6_1:+11062213 Msa0875050:CDS
GCTTACATCTGTCACTACAA+TGG 0.644673 6_1:+11062321 Msa0875050:CDS
ATTTGCTTAAAGCTGACTAG+AGG 0.659050 6_1:-11061714 None:intergenic
CACAACACCATGCATCGATG+AGG 0.673661 6_1:-11063070 None:intergenic
ATTGTAGTGACAGATGTAAG+CGG 0.697402 6_1:-11062319 None:intergenic
ACAGTACTCTAATACAAACA+AGG 0.700951 6_1:-11064044 None:intergenic
AGGACTATAGCAATAAGACC+AGG 0.708838 6_1:-11060912 None:intergenic
TCATTGAGTGCAGAACCGAA+AGG 0.717972 6_1:-11063213 None:intergenic
GAAAACAAGGAAGAACAAGG+AGG 0.744501 6_1:+11060722 Msa0875050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAATTGTATTTATATT+AGG + chr6_1:11062013-11062032 Msa0875050:intron 10.0%
!!! CAATTTATTTCATTTTATAA+TGG + chr6_1:11063524-11063543 Msa0875050:intron 10.0%
!!! TTGTTTAGTTAAATTTTAGT+TGG - chr6_1:11063595-11063614 None:intergenic 15.0%
!! AACTAAAATTTAACTAAACA+AGG + chr6_1:11063594-11063613 Msa0875050:intron 15.0%
!!! ATTAAATTAATTTTCTCCAT+AGG + chr6_1:11063943-11063962 Msa0875050:three_prime_UTR 15.0%
!!! TTAAATTAATTTTCTCCATA+GGG + chr6_1:11063944-11063963 Msa0875050:three_prime_UTR 15.0%
!! ATTGTCTACATGATTATTAT+TGG + chr6_1:11061092-11061111 Msa0875050:CDS 20.0%
!!! GTACTAGATTTTTAAGAATA+TGG - chr6_1:11061124-11061143 None:intergenic 20.0%
!! CTTATAAAATTACAAGTTAC+TGG + chr6_1:11061805-11061824 Msa0875050:intron 20.0%
!!! ATGAATACATGTATTGATAT+GGG - chr6_1:11062108-11062127 None:intergenic 20.0%
!!! AATGAATACATGTATTGATA+TGG - chr6_1:11062109-11062128 None:intergenic 20.0%
!!! GCATGATTATATACATTTTA+CGG + chr6_1:11062667-11062686 Msa0875050:intron 20.0%
!!! TTATATACATTTTACGGTTT+AGG + chr6_1:11062673-11062692 Msa0875050:intron 20.0%
!! ATCATTTATGTTGTATTTGT+CGG + chr6_1:11064164-11064183 Msa0875050:three_prime_UTR 20.0%
!! GACAAACAAAAATTTAATCA+TGG + chr6_1:11064335-11064354 Msa0875050:three_prime_UTR 20.0%
! TGAAGAAAAGATTCAAAGTT+TGG - chr6_1:11060593-11060612 None:intergenic 25.0%
!! TTTTCTTCAACTTGAGAAAT+GGG + chr6_1:11060604-11060623 Msa0875050:intron 25.0%
! TCCATTAAATTCATGTAACT+CGG - chr6_1:11060796-11060815 None:intergenic 25.0%
! AATTTATCGACAACAGTTAT+CGG + chr6_1:11060840-11060859 Msa0875050:CDS 25.0%
!! TGTGTTGTTATCAATAATGT+TGG + chr6_1:11061062-11061081 Msa0875050:CDS 25.0%
!! AAATTTTTCCAAAATCACAG+TGG + chr6_1:11061443-11061462 Msa0875050:intron 25.0%
!! AAGGTTCTATAACTCAATTT+TGG + chr6_1:11061547-11061566 Msa0875050:intron 25.0%
!!! TTTTGGTTTGATCATATTGT+AGG + chr6_1:11061564-11061583 Msa0875050:intron 25.0%
! TAAAGGTAAGAACAAATGTA+CGG - chr6_1:11061674-11061693 None:intergenic 25.0%
! TCAATTATCAAGATTATCAG+TGG + chr6_1:11062210-11062229 Msa0875050:CDS 25.0%
! TAACTTATGTAACTCTGAAT+TGG + chr6_1:11062408-11062427 Msa0875050:intron 25.0%
! AGTTTGCATTAAAAAGTTCA+AGG + chr6_1:11062436-11062455 Msa0875050:intron 25.0%
!! TGTTTTCTTGTCAAATTAGT+TGG - chr6_1:11062504-11062523 None:intergenic 25.0%
! AGATTATTTCCGTTTATTTC+TGG + chr6_1:11062560-11062579 Msa0875050:intron 25.0%
! CAATAGTAATTGATGCAAAT+CGG - chr6_1:11063365-11063384 None:intergenic 25.0%
! GTTTGTTTCAAACTAAAGAA+TGG - chr6_1:11063571-11063590 None:intergenic 25.0%
! AAATTTAACTAAACAAGGTG+AGG + chr6_1:11063599-11063618 Msa0875050:intron 25.0%
! TTGAAGAAAATTTGTACACA+TGG - chr6_1:11063995-11064014 None:intergenic 25.0%
! CACAAAACTGTATGTTTATA+CGG + chr6_1:11064113-11064132 Msa0875050:three_prime_UTR 25.0%
! TCATTTATGTTGTATTTGTC+GGG + chr6_1:11064165-11064184 Msa0875050:three_prime_UTR 25.0%
! ATCATGGATTTGAAAATTTG+TGG + chr6_1:11064351-11064370 Msa0875050:three_prime_UTR 25.0%
CAAATCCAAATAGAGTTTGT+TGG - chr6_1:11060458-11060477 None:intergenic 30.0%
! CTTTTCTTCAACTTGAGAAA+TGG + chr6_1:11060603-11060622 Msa0875050:intron 30.0%
AAATTCATGTAACTCGGTAT+CGG - chr6_1:11060790-11060809 None:intergenic 30.0%
ACCGAGTTACATGAATTTAA+TGG + chr6_1:11060792-11060811 Msa0875050:CDS 30.0%
! TTTAATGGAGCTTCATTTTC+AGG + chr6_1:11060807-11060826 Msa0875050:CDS 30.0%
TTCTTCTTATGGAAGTCTTA+TGG + chr6_1:11060998-11061017 Msa0875050:CDS 30.0%
! TCTTCTTATGGAAGTCTTAT+GGG + chr6_1:11060999-11061018 Msa0875050:CDS 30.0%
TTCTACTGTTATCATCAGTT+TGG + chr6_1:11061156-11061175 Msa0875050:intron 30.0%
TTGAATGTAACCACATGTAT+CGG - chr6_1:11061274-11061293 None:intergenic 30.0%
! TTATCAGTTTGGTGAAATCA+CGG + chr6_1:11061387-11061406 Msa0875050:intron 30.0%
TTCTTGTCTAAAGAGACTTA+TGG - chr6_1:11061524-11061543 None:intergenic 30.0%
TCTCTTTAGACAAGAACTTA+AGG + chr6_1:11061528-11061547 Msa0875050:intron 30.0%
CTTATCACTGAAGTACAAAT+TGG + chr6_1:11061885-11061904 Msa0875050:intron 30.0%
!!! AGTTTTGTTGCTAAGTTGTT+TGG + chr6_1:11061924-11061943 Msa0875050:intron 30.0%
AAGCAAAAACACTTGTACAA+AGG - chr6_1:11061978-11061997 None:intergenic 30.0%
!! TGTTTTTGCTTACTTGAGTT+AGG + chr6_1:11061987-11062006 Msa0875050:intron 30.0%
! CACAAACACATCTAAAACTA+AGG - chr6_1:11062069-11062088 None:intergenic 30.0%
!!! CTTAGTTTTAGATGTGTTTG+TGG + chr6_1:11062067-11062086 Msa0875050:intron 30.0%
! TGTTTTCCTTATCATTTCTG+TGG + chr6_1:11062182-11062201 Msa0875050:CDS 30.0%
! GTTTTCCTTATCATTTCTGT+GGG + chr6_1:11062183-11062202 Msa0875050:CDS 30.0%
AAATTCCCACAGAAATGATA+AGG - chr6_1:11062191-11062210 None:intergenic 30.0%
ATTATCAAGATTATCAGTGG+AGG + chr6_1:11062213-11062232 Msa0875050:CDS 30.0%
!! GTGAAATTAGTTCTAGACAA+AGG - chr6_1:11062364-11062383 None:intergenic 30.0%
TCTCAAGTAGTAATAAACAC+TGG + chr6_1:11062735-11062754 Msa0875050:intron 30.0%
TTGCAAAAGTTTCAGTTATG+TGG + chr6_1:11062764-11062783 Msa0875050:intron 30.0%
AAAAGTTTCAGTTATGTGGT+AGG + chr6_1:11062768-11062787 Msa0875050:intron 30.0%
ATAGCAGTGCTATAACATAT+CGG + chr6_1:11062817-11062836 Msa0875050:intron 30.0%
TCACAACATAGATAATGAAC+TGG + chr6_1:11063041-11063060 Msa0875050:CDS 30.0%
! TCCAAGATTAGTATCGAAAT+TGG - chr6_1:11063190-11063209 None:intergenic 30.0%
ACTAATCTTGGAATTCCTTT+CGG + chr6_1:11063198-11063217 Msa0875050:CDS 30.0%
! TGTAGTTTTCTATGCATTGA+GGG + chr6_1:11063281-11063300 Msa0875050:CDS 30.0%
TGATATTTACCTCATCAAGA+AGG + chr6_1:11063319-11063338 Msa0875050:CDS 30.0%
TCAATTACTATTGCACTTGT+TGG + chr6_1:11063372-11063391 Msa0875050:CDS 30.0%
AAACTTCATACCTAGCATTT+GGG + chr6_1:11063413-11063432 Msa0875050:CDS 30.0%
!!! TAAGCATTTTGTTTTCGTAC+AGG + chr6_1:11063708-11063727 Msa0875050:intron 30.0%
!!! AAGCATTTTGTTTTCGTACA+GGG + chr6_1:11063709-11063728 Msa0875050:intron 30.0%
TTTCCATACATTCAGATGAA+AGG + chr6_1:11063899-11063918 Msa0875050:three_prime_UTR 30.0%
!! GAAAGGAACATAATTTGCTA+TGG + chr6_1:11063916-11063935 Msa0875050:three_prime_UTR 30.0%
! TTAATTTTCTCCATAGGGTT+CGG + chr6_1:11063949-11063968 Msa0875050:three_prime_UTR 30.0%
!! TTTTCTTCAAAAGTGTGTGA+AGG + chr6_1:11064005-11064024 Msa0875050:three_prime_UTR 30.0%
ACAGTACTCTAATACAAACA+AGG - chr6_1:11064047-11064066 None:intergenic 30.0%
TTAATTGTACACAACATGTC+TGG + chr6_1:11064066-11064085 Msa0875050:three_prime_UTR 30.0%
CATTTATGTTGTATTTGTCG+GGG + chr6_1:11064166-11064185 Msa0875050:three_prime_UTR 30.0%
! TGGTTATGTTCAAGAGTTTT+TGG + chr6_1:11064308-11064327 Msa0875050:three_prime_UTR 30.0%
! GGTTATGTTCAAGAGTTTTT+GGG + chr6_1:11064309-11064328 Msa0875050:three_prime_UTR 30.0%
CTCAACCAACAAACTCTATT+TGG + chr6_1:11060450-11060469 Msa0875050:intron 35.0%
CAGAGAAGAAGAAGAAAACA+AGG + chr6_1:11060709-11060728 Msa0875050:CDS 35.0%
GAAGAAAACAAGGAAGAACA+AGG + chr6_1:11060719-11060738 Msa0875050:CDS 35.0%
TCTTGAGACTTAGGTAACAA+AGG - chr6_1:11060765-11060784 None:intergenic 35.0%
TCTCTGTCAAAAATGCTGTT+AGG - chr6_1:11060935-11060954 None:intergenic 35.0%
! AATTCATGCTCAGGTTTTCA+AGG + chr6_1:11060964-11060983 Msa0875050:CDS 35.0%
! ATTCATGCTCAGGTTTTCAA+GGG + chr6_1:11060965-11060984 Msa0875050:CDS 35.0%
! CTTCTTATGGAAGTCTTATG+GGG + chr6_1:11061000-11061019 Msa0875050:CDS 35.0%
! TTCTTATGGAAGTCTTATGG+GGG + chr6_1:11061001-11061020 Msa0875050:CDS 35.0%
!!! GTTTGGTTTTCGTGTATGTT+TGG + chr6_1:11061173-11061192 Msa0875050:intron 35.0%
GAAATGATGCTTCAGATTGA+TGG + chr6_1:11061205-11061224 Msa0875050:intron 35.0%
! TAACCCTGTGATTTTGTTAG+AGG + chr6_1:11061410-11061429 Msa0875050:intron 35.0%
GTACCTCTAACAAAATCACA+GGG - chr6_1:11061416-11061435 None:intergenic 35.0%
TGTACCTCTAACAAAATCAC+AGG - chr6_1:11061417-11061436 None:intergenic 35.0%
!! TGGATTGGTGATGAGTTTAA+CGG - chr6_1:11061481-11061500 None:intergenic 35.0%
TGATCATATTGTAGGTGATG+TGG + chr6_1:11061572-11061591 Msa0875050:intron 35.0%
! AAACACAGCAAGTGTTGTAA+AGG - chr6_1:11061691-11061710 None:intergenic 35.0%
ATTTGCTTAAAGCTGACTAG+AGG - chr6_1:11061717-11061736 None:intergenic 35.0%
!! CTAGTCAGCTTTAAGCAAAT+TGG + chr6_1:11061717-11061736 Msa0875050:CDS 35.0%
AGAAATTAGACGACAGTGAT+AGG + chr6_1:11061830-11061849 Msa0875050:intron 35.0%
TGTACTTCAGTGATAAGCTA+TGG - chr6_1:11061882-11061901 None:intergenic 35.0%
! AAGATTATCAGTGGAGGTAT+TGG + chr6_1:11062219-11062238 Msa0875050:CDS 35.0%
!! AGATTATCAGTGGAGGTATT+GGG + chr6_1:11062220-11062239 Msa0875050:CDS 35.0%
ATTGTAGTGACAGATGTAAG+CGG - chr6_1:11062322-11062341 None:intergenic 35.0%
TACCAATCTTATGCAAAGAG+TGG - chr6_1:11062470-11062489 None:intergenic 35.0%
CTTGTCAAATTAGTTGGACA+TGG - chr6_1:11062498-11062517 None:intergenic 35.0%
AGTACACGACCAGAAATAAA+CGG - chr6_1:11062572-11062591 None:intergenic 35.0%
! TACATTTTACGGTTTAGGCT+TGG + chr6_1:11062678-11062697 Msa0875050:intron 35.0%
GATATGTTATAGCACTGCTA+TGG - chr6_1:11062818-11062837 None:intergenic 35.0%
ACATCTATGAAGCAAACAGA+TGG - chr6_1:11062980-11062999 None:intergenic 35.0%
TGCTTCATAGATGTATAACC+TGG + chr6_1:11062986-11063005 Msa0875050:intron 35.0%
TTCATAGATGTATAACCTGG+TGG + chr6_1:11062989-11063008 Msa0875050:intron 35.0%
CAACATAGATAATGAACTGG+AGG + chr6_1:11063044-11063063 Msa0875050:CDS 35.0%
TACTTACTGACAAGCTTCTT+TGG + chr6_1:11063123-11063142 Msa0875050:CDS 35.0%
ACTTACTGACAAGCTTCTTT+GGG + chr6_1:11063124-11063143 Msa0875050:CDS 35.0%
!! AAAGAGTATCGTCACCAAAT+AGG - chr6_1:11063155-11063174 None:intergenic 35.0%
GCCAATTTCGATACTAATCT+TGG + chr6_1:11063186-11063205 Msa0875050:CDS 35.0%
CTCAATGCATAGAAAACTAC+AGG - chr6_1:11063282-11063301 None:intergenic 35.0%
! CTGTAGTTTTCTATGCATTG+AGG + chr6_1:11063280-11063299 Msa0875050:CDS 35.0%
CAAACTTCATACCTAGCATT+TGG + chr6_1:11063412-11063431 Msa0875050:CDS 35.0%
AACTAAACAAGGTGAGGTAA+TGG + chr6_1:11063605-11063624 Msa0875050:intron 35.0%
!! TTTTGGTTGCTATGTTGTGT+CGG - chr6_1:11063736-11063755 None:intergenic 35.0%
ACACAACATAGCAACCAAAA+CGG + chr6_1:11063736-11063755 Msa0875050:CDS 35.0%
GTTCCTTTCATCTGAATGTA+TGG - chr6_1:11063905-11063924 None:intergenic 35.0%
AACAAGGTTGAACAAATTGC+AGG - chr6_1:11064031-11064050 None:intergenic 35.0%
TTATCGAAGAGATGAATCCA+GGG - chr6_1:11064214-11064233 None:intergenic 35.0%
TTTATCGAAGAGATGAATCC+AGG - chr6_1:11064215-11064234 None:intergenic 35.0%
CTCTTCGATAAATGTAAGAG+AGG + chr6_1:11064223-11064242 Msa0875050:three_prime_UTR 35.0%
!! AATGTAAGAGAGGCATTTGT+TGG + chr6_1:11064233-11064252 Msa0875050:three_prime_UTR 35.0%
TCTGCATTATCAATGGCTAA+GGG + chr6_1:11064262-11064281 Msa0875050:three_prime_UTR 35.0%
TGCTGTTGTGTATGAAAGAA+TGG + chr6_1:11064288-11064307 Msa0875050:three_prime_UTR 35.0%
GAAAACAAGGAAGAACAAGG+AGG + chr6_1:11060722-11060741 Msa0875050:CDS 40.0%
!! GTATCGGTTTCTTGAGACTT+AGG - chr6_1:11060774-11060793 None:intergenic 40.0%
CCTGCTTGTGTTAAGAAGTT+GGG + chr6_1:11060882-11060901 Msa0875050:CDS 40.0%
CTGCTTGTGTTAAGAAGTTG+GGG + chr6_1:11060883-11060902 Msa0875050:CDS 40.0%
TTGTGTTAAGAAGTTGGGGA+TGG + chr6_1:11060887-11060906 Msa0875050:CDS 40.0%
AGGACTATAGCAATAAGACC+AGG - chr6_1:11060915-11060934 None:intergenic 40.0%
AGTCAGTTGAATTCATGCTC+AGG + chr6_1:11060955-11060974 Msa0875050:CDS 40.0%
! TGCTTTTCCATATCTCCCAA+AGG - chr6_1:11061030-11061049 None:intergenic 40.0%
!! CTTCAGATTGATGGTGTGAT+TGG + chr6_1:11061214-11061233 Msa0875050:intron 40.0%
!! TCAACACGTCGATTTCAATG+TGG + chr6_1:11061324-11061343 Msa0875050:intron 40.0%
! GTCGATTTCAATGTGGTGTT+TGG + chr6_1:11061331-11061350 Msa0875050:intron 40.0%
TGTCTGTGTCAGTGTTTCAT+TGG + chr6_1:11061354-11061373 Msa0875050:intron 40.0%
!! GCTTGGATGGATTATCAGTT+TGG + chr6_1:11061376-11061395 Msa0875050:intron 40.0%
TCCAAAATCACAGTGGTCTA+CGG + chr6_1:11061450-11061469 Msa0875050:intron 40.0%
CTTATCAACGAGTGCATGTT+TGG - chr6_1:11061501-11061520 None:intergenic 40.0%
ATTGTAGGTGATGTGGTTTC+TGG + chr6_1:11061579-11061598 Msa0875050:intron 40.0%
!! GTTTCTGGAACAACTTCAAG+TGG + chr6_1:11061594-11061613 Msa0875050:CDS 40.0%
TCAAGTGGAATTCACCATTC+TGG + chr6_1:11061609-11061628 Msa0875050:CDS 40.0%
ATCCTTCAAGGATACCAGAA+TGG - chr6_1:11061626-11061645 None:intergenic 40.0%
ATTCTGGTATCCTTGAAGGA+TGG + chr6_1:11061625-11061644 Msa0875050:CDS 40.0%
TATTGATATGGGCAGTGTTC+AGG - chr6_1:11062097-11062116 None:intergenic 40.0%
TTCACATCTGCGTTATCAGT+TGG + chr6_1:11062150-11062169 Msa0875050:CDS 40.0%
GTAATGATTGGGAAGAGTCT+TGG - chr6_1:11062249-11062268 None:intergenic 40.0%
GCTTACATCTGTCACTACAA+TGG + chr6_1:11062321-11062340 Msa0875050:CDS 40.0%
GACCACTCTTTGCATAAGAT+TGG + chr6_1:11062465-11062484 Msa0875050:intron 40.0%
AATTTCAGTGTTCCCAGTTC+AGG - chr6_1:11062605-11062624 None:intergenic 40.0%
GTCTTGTCAATCTCAGATGA+CGG - chr6_1:11062925-11062944 None:intergenic 40.0%
! TCATCTGAGATTGACAAGAC+TGG + chr6_1:11062925-11062944 Msa0875050:intron 40.0%
! TTCTTTGGGTTCCTCCTATT+TGG + chr6_1:11063138-11063157 Msa0875050:CDS 40.0%
ATCGAAATTGGCAAGAACGT+CGG - chr6_1:11063178-11063197 None:intergenic 40.0%
GCATTGAGGGTTAACATAGA+TGG + chr6_1:11063294-11063313 Msa0875050:CDS 40.0%
CGGAAGTTATCAACAACCAA+AGG - chr6_1:11063345-11063364 None:intergenic 40.0%
!! ACTTGTTGGCCTTATCTTCA+TGG + chr6_1:11063386-11063405 Msa0875050:CDS 40.0%
!! CTTGTTGGCCTTATCTTCAT+GGG + chr6_1:11063387-11063406 Msa0875050:CDS 40.0%
! AGTTTGCTCCCATGAAGATA+AGG - chr6_1:11063398-11063417 None:intergenic 40.0%
! AGACAGAATCTTGTCCGTTT+TGG - chr6_1:11063753-11063772 None:intergenic 40.0%
GTCTGTCTTTATGATCGTTC+TGG + chr6_1:11063769-11063788 Msa0875050:CDS 40.0%
! GATTTGATAGCTCACAGTAC+AGG + chr6_1:11063874-11063893 Msa0875050:exon 40.0%
TTGAATGTGCTCTATTTCCC+TGG + chr6_1:11064194-11064213 Msa0875050:three_prime_UTR 40.0%
GCACTTGTCTGCATTATCAA+TGG + chr6_1:11064255-11064274 Msa0875050:three_prime_UTR 40.0%
GTCTGCATTATCAATGGCTA+AGG + chr6_1:11064261-11064280 Msa0875050:three_prime_UTR 40.0%
AGGAAGAACAAGGAGGTTGT+CGG + chr6_1:11060729-11060748 Msa0875050:CDS 45.0%
GCCTGCTTGTGTTAAGAAGT+TGG + chr6_1:11060881-11060900 Msa0875050:CDS 45.0%
CCCAACTTCTTAACACAAGC+AGG - chr6_1:11060885-11060904 None:intergenic 45.0%
GCGGGGAATCTTTCTTCTTA+TGG + chr6_1:11060987-11061006 Msa0875050:CDS 45.0%
TGACAAGACACCGATACATG+TGG + chr6_1:11061261-11061280 Msa0875050:intron 45.0%
! GTGTCAGTGTTTCATTGGCT+TGG + chr6_1:11061359-11061378 Msa0875050:intron 45.0%
!! CAGTGTTTCATTGGCTTGGA+TGG + chr6_1:11061363-11061382 Msa0875050:intron 45.0%
! TCCGTAGACCACTGTGATTT+TGG - chr6_1:11061454-11061473 None:intergenic 45.0%
CAACGAGTGCATGTTTGGAT+TGG - chr6_1:11061496-11061515 None:intergenic 45.0%
CACCATTCTGGTATCCTTGA+AGG + chr6_1:11061621-11061640 Msa0875050:CDS 45.0%
GGTATCCTTGAAGGATGGTT+TGG + chr6_1:11061630-11061649 Msa0875050:CDS 45.0%
!! AAGGATGGTTTGGTGTCCAT+TGG + chr6_1:11061640-11061659 Msa0875050:CDS 45.0%
!! GATAAGCTATGGAGCACTGA+TGG - chr6_1:11061871-11061890 None:intergenic 45.0%
CTTCCCAATCATTACTGACG+CGG + chr6_1:11062254-11062273 Msa0875050:CDS 45.0%
AAGCCGCGTCAGTAATGATT+GGG - chr6_1:11062260-11062279 None:intergenic 45.0%
ATTCACTGTAGTTCCTGTGC+TGG + chr6_1:11062293-11062312 Msa0875050:CDS 45.0%
! TTAGGCTTGGTTGCTTGACA+TGG + chr6_1:11062691-11062710 Msa0875050:intron 45.0%
TGACCACTGTTGCCATATAG+CGG + chr6_1:11062792-11062811 Msa0875050:intron 45.0%
! GAGTATCGTCACCAAATAGG+AGG - chr6_1:11063152-11063171 None:intergenic 45.0%
TCATTGAGTGCAGAACCGAA+AGG - chr6_1:11063216-11063235 None:intergenic 45.0%
TACCTCATCAAGAAGGCCTT+TGG + chr6_1:11063326-11063345 Msa0875050:CDS 45.0%
AACCAAAGGCCTTCTTGATG+AGG - chr6_1:11063331-11063350 None:intergenic 45.0%
TGGAAAAGGTCCCAAATGCT+AGG - chr6_1:11063426-11063445 None:intergenic 45.0%
TTGCTCCAGTGAACTGGAAA+AGG - chr6_1:11063440-11063459 None:intergenic 45.0%
! GCAACTGCTGCTGTTTGTTT+AGG + chr6_1:11063456-11063475 Msa0875050:CDS 45.0%
! GGCAGTCTTGTCAAATGTTG+TGG + chr6_1:11063790-11063809 Msa0875050:CDS 45.0%
! ATTTTCTCCATAGGGTTCGG+TGG + chr6_1:11063952-11063971 Msa0875050:three_prime_UTR 45.0%
!! TTTTCTCCATAGGGTTCGGT+GGG + chr6_1:11063953-11063972 Msa0875050:three_prime_UTR 45.0%
TCGACAACAGTTATCGGTGC+TGG + chr6_1:11060846-11060865 Msa0875050:CDS 50.0%
! CGACAACAGTTATCGGTGCT+GGG + chr6_1:11060847-11060866 Msa0875050:CDS 50.0%
!! AGTTATCGGTGCTGGGATCA+TGG + chr6_1:11060854-11060873 Msa0875050:CDS 50.0%
!! GTTATCGGTGCTGGGATCAT+GGG + chr6_1:11060855-11060874 Msa0875050:CDS 50.0%
!! CATGCTCAGGTTTTCAAGGG+CGG + chr6_1:11060968-11060987 Msa0875050:CDS 50.0%
!! ATGCTCAGGTTTTCAAGGGC+GGG + chr6_1:11060969-11060988 Msa0875050:CDS 50.0%
! AGTCTTATGGGGGATGCCTT+TGG + chr6_1:11061011-11061030 Msa0875050:CDS 50.0%
GTCTTATGGGGGATGCCTTT+GGG + chr6_1:11061012-11061031 Msa0875050:CDS 50.0%
GGACACCAAACCATCCTTCA+AGG - chr6_1:11061638-11061657 None:intergenic 50.0%
!! GATGGTTTGGTGTCCATTGG+TGG + chr6_1:11061643-11061662 Msa0875050:CDS 50.0%
!! TTTGGTGTCCATTGGTGGAC+TGG + chr6_1:11061648-11061667 Msa0875050:CDS 50.0%
GAAGCCGCGTCAGTAATGAT+TGG - chr6_1:11062261-11062280 None:intergenic 50.0%
GAGGATTCCTCATCGATGCA+TGG + chr6_1:11063063-11063082 Msa0875050:CDS 50.0%
! CACAACACCATGCATCGATG+AGG - chr6_1:11063073-11063092 None:intergenic 50.0%
! TGGGACCTTTTCCAGTTCAC+TGG + chr6_1:11063432-11063451 Msa0875050:CDS 50.0%
TACTTCAGAGTGACTGCAGC+TGG - chr6_1:11063492-11063511 None:intergenic 50.0%
AATCAACCCACCGAACCCTA+TGG - chr6_1:11063962-11063981 None:intergenic 50.0%
AAGAAGTTGGGGATGGTGCC+TGG + chr6_1:11060894-11060913 Msa0875050:CDS 55.0%
!! TGCTCAGGTTTTCAAGGGCG+GGG + chr6_1:11060970-11060989 Msa0875050:CDS 55.0%
! GGGGATGCCTTTGGGAGATA+TGG + chr6_1:11061020-11061039 Msa0875050:CDS 55.0%
ATGTACGGCCAGTCCACCAA+TGG - chr6_1:11061659-11061678 None:intergenic 55.0%
ATGTAAGCGGTCACCAGCAC+AGG - chr6_1:11062309-11062328 None:intergenic 55.0%
CTGGTCGTGTACTGCACCAT+TGG + chr6_1:11062579-11062598 Msa0875050:intron 55.0%
! ACTGCACCATTGGCCTGAAC+TGG + chr6_1:11062589-11062608 Msa0875050:intron 55.0%
! CTGCACCATTGGCCTGAACT+GGG + chr6_1:11062590-11062609 Msa0875050:intron 55.0%
GTGTTCCCAGTTCAGGCCAA+TGG - chr6_1:11062598-11062617 None:intergenic 55.0%
TGGCCGCTATATGGCAACAG+TGG - chr6_1:11062798-11062817 None:intergenic 55.0%
GCACTGCTATGGCCGCTATA+TGG - chr6_1:11062807-11062826 None:intergenic 55.0%
CAGCAGTTGCTCCAGTGAAC+TGG - chr6_1:11063446-11063465 None:intergenic 55.0%
GCGCACACGATACAACCACC+AGG - chr6_1:11063007-11063026 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 11060419 11064374 11060419 ID=Msa0875050;Name=Msa0875050
chr6_1 mRNA 11060419 11064374 11060419 ID=Msa0875050-mRNA-1;Parent=Msa0875050;Name=Msa0875050-mRNA-1;_AED=0.08;_eAED=0.08;_QI=66|1|1|1|0.8|0.66|6|494|464
chr6_1 exon 11060419 11060434 11060419 ID=Msa0875050-mRNA-1:exon:3420;Parent=Msa0875050-mRNA-1
chr6_1 exon 11060646 11061113 11060646 ID=Msa0875050-mRNA-1:exon:3421;Parent=Msa0875050-mRNA-1
chr6_1 exon 11061586 11061738 11061586 ID=Msa0875050-mRNA-1:exon:3422;Parent=Msa0875050-mRNA-1
chr6_1 exon 11062139 11062342 11062139 ID=Msa0875050-mRNA-1:exon:3423;Parent=Msa0875050-mRNA-1
chr6_1 exon 11063040 11063508 11063040 ID=Msa0875050-mRNA-1:exon:3424;Parent=Msa0875050-mRNA-1
chr6_1 exon 11063730 11064374 11063730 ID=Msa0875050-mRNA-1:exon:3425;Parent=Msa0875050-mRNA-1
chr6_1 five_prime_UTR 11060419 11060434 11060419 ID=Msa0875050-mRNA-1:five_prime_utr;Parent=Msa0875050-mRNA-1
chr6_1 five_prime_UTR 11060646 11060695 11060646 ID=Msa0875050-mRNA-1:five_prime_utr;Parent=Msa0875050-mRNA-1
chr6_1 CDS 11060696 11061113 11060696 ID=Msa0875050-mRNA-1:cds;Parent=Msa0875050-mRNA-1
chr6_1 CDS 11061586 11061738 11061586 ID=Msa0875050-mRNA-1:cds;Parent=Msa0875050-mRNA-1
chr6_1 CDS 11062139 11062342 11062139 ID=Msa0875050-mRNA-1:cds;Parent=Msa0875050-mRNA-1
chr6_1 CDS 11063040 11063508 11063040 ID=Msa0875050-mRNA-1:cds;Parent=Msa0875050-mRNA-1
chr6_1 CDS 11063730 11063880 11063730 ID=Msa0875050-mRNA-1:cds;Parent=Msa0875050-mRNA-1
chr6_1 three_prime_UTR 11063881 11064374 11063881 ID=Msa0875050-mRNA-1:three_prime_utr;Parent=Msa0875050-mRNA-1
Gene Sequence

>Msa0875050

ATGACAATTGAAACAGAGAAGAAGAAGAAAACAAGGAAGAACAAGGAGGTTGTCGGCGAGAATGCACCTTTGTTACCTAAGTCTCAAGAAACCGATACCGAGTTACATGAATTTAATGGAGCTTCATTTTCAGGAGCTGTTTTCAATTTATCGACAACAGTTATCGGTGCTGGGATCATGGGCTTGCCTGCTTGTGTTAAGAAGTTGGGGATGGTGCCTGGTCTTATTGCTATAGTCCTAACAGCATTTTTGACAGAGAAGTCAGTTGAATTCATGCTCAGGTTTTCAAGGGCGGGGAATCTTTCTTCTTATGGAAGTCTTATGGGGGATGCCTTTGGGAGATATGGAAAAGCACTTTTAGAGATATGTGTTGTTATCAATAATGTTGGTGTTCTTATTGTCTACATGATTATTATTGGTGATGTGGTTTCTGGAACAACTTCAAGTGGAATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGCCGTACATTTGTTCTTACCTTTACAACACTTGCTGTGTTTGCACCTCTAGTCAGCTTTAAGCAAATTGATTCATTGAGATTCACATCTGCGTTATCAGTTGGATTAGCAGTTGTTTTCCTTATCATTTCTGTGGGAATTTCAATTATCAAGATTATCAGTGGAGGTATTGGGATGCCAAGACTCTTCCCAATCATTACTGACGCGGCTTCAGTTTTTGATCTATTCACTGTAGTTCCTGTGCTGGTGACCGCTTACATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAGGATTCCTCATCGATGCATGGTGTTGTGCGTGCTTCACTTACTCTATGCTCTTCAGTTTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGATACTCTTTCCGACGTTCTTGCCAATTTCGATACTAATCTTGGAATTCCTTTCGGTTCTGCACTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGCATTGAGGGTTAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCTTTGGTTGTTGATAACTTCCGATTTGCATCAATTACTATTGCACTTGTTGGCCTTATCTTCATGGGAGCAAACTTCATACCTAGCATTTGGGACCTTTTCCAGTTCACTGGAGCAACTGCTGCTGTTTGTTTAGGATTCATATTTCCAGCTGCAGTCACTCTGAAGGACCGACACAACATAGCAACCAAAACGGACAAGATTCTGTCTGTCTTTATGATCGTTCTGGCAGTCTTGTCAAATGTTGTGGCTATATACAGTGATGCTTATGCTTTAATCAACAAGAATAAACAAAATATGAACGATTTCTTGATTTGA
Protein sequence

>Msa0875050

MTIETEKKKKTRKNKEVVGENAPLLPKSQETDTELHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLIAIVLTAFLTEKSVEFMLRFSRAGNLSSYGSLMGDAFGRYGKALLEICVVINNVGVLIVYMIIIGDVVSGTTSSGIHHSGILEGWFGVHWWTGRTFVLTFTTLAVFAPLVSFKQIDSLRFTSALSVGLAVVFLIISVGISIIKIISGGIGMPRLFPIITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSSMHGVVRASLTLCSSVYLLTSFFGFLLFGDDTLSDVLANFDTNLGIPFGSALNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFTSSRRPLVVDNFRFASITIALVGLIFMGANFIPSIWDLFQFTGATAAVCLGFIFPAAVTLKDRHNIATKTDKILSVFMIVLAVLSNVVAIYSDAYALINKNKQNMNDFLI*