AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0722910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722910 MtrunA17_Chr5g0413951 79.143 350 19 2 1 296 1 350 1.07e-180 501
Msa0722910 MtrunA17_Chr5g0413941 72.000 350 44 2 1 296 1 350 1.56e-167 468
Msa0722910 MtrunA17_Chr5g0413931 64.620 342 67 2 8 295 7 348 2.94e-151 427
Msa0722910 MtrunA17_Chr5g0413921 60.411 341 78 2 5 292 5 341 2.63e-136 389
Msa0722910 MtrunA17_Chr7g0227921 36.765 340 158 4 12 295 16 354 9.65e-62 199
Msa0722910 MtrunA17_Chr5g0413961 35.103 339 156 6 12 292 19 351 6.56e-58 189
Msa0722910 MtrunA17_Chr4g0059311 36.686 338 155 5 12 291 16 352 8.08e-58 189
Msa0722910 MtrunA17_Chr6g0451211 36.471 340 152 6 12 291 17 352 1.95e-57 188
Msa0722910 MtrunA17_Chr6g0451251 39.542 349 133 8 12 293 17 354 9.30e-55 181
Msa0722910 MtrunA17_Chr3g0126101 35.207 338 163 5 12 296 11 345 3.56e-54 179
Msa0722910 MtrunA17_Chr6g0451201 38.416 341 147 6 12 295 17 351 1.12e-53 178
Msa0722910 MtrunA17_Chr6g0451171 35.494 324 148 5 25 291 30 349 3.16e-51 172
Msa0722910 MtrunA17_Chr1g0150151 32.571 350 157 5 10 289 14 354 1.26e-50 171
Msa0722910 MtrunA17_Chr6g0451261 33.557 298 143 3 10 253 14 310 1.10e-45 164
Msa0722910 MtrunA17_Chr3g0126091 30.409 342 176 9 12 292 16 356 1.50e-41 147
Msa0722910 MtrunA17_Chr3g0114731 31.003 329 166 7 12 284 23 346 6.21e-38 138
Msa0722910 MtrunA17_Chr3g0081511 29.012 324 161 7 12 273 22 338 8.34e-38 137
Msa0722910 MtrunA17_Chr8g0354121 26.970 330 167 7 10 273 16 337 1.50e-37 137
Msa0722910 MtrunA17_Chr3g0114691 28.840 319 170 6 31 293 44 361 3.62e-34 128
Msa0722910 MtrunA17_Chr6g0483401 29.586 338 175 10 16 295 19 351 6.29e-33 124
Msa0722910 MtrunA17_Chr3g0129601 28.840 319 168 6 25 285 47 364 1.07e-32 123
Msa0722910 MtrunA17_Chr1g0182291 26.994 326 176 7 23 291 31 351 1.93e-32 123
Msa0722910 MtrunA17_Chr7g0271561 28.261 322 169 6 12 272 12 332 6.28e-32 122
Msa0722910 MtrunA17_Chr1g0160171 30.094 319 168 6 12 276 21 338 7.55e-32 121
Msa0722910 MtrunA17_Chr4g0050881 28.205 351 169 8 12 290 14 353 3.10e-31 119
Msa0722910 MtrunA17_Chr8g0334761 26.814 317 174 5 12 272 15 329 4.36e-31 119
Msa0722910 MtrunA17_Chr1g0160181 29.448 326 158 8 12 273 23 340 5.10e-31 119
Msa0722910 MtrunA17_Chr8g0369841 27.628 333 172 6 10 274 12 343 3.95e-30 117
Msa0722910 MtrunA17_Chr5g0408031 26.706 337 172 8 12 276 15 348 9.21e-30 116
Msa0722910 MtrunA17_Chr1g0164831 27.445 317 163 7 25 279 21 332 1.26e-29 115
Msa0722910 MtrunA17_Chr5g0408041 26.629 353 180 10 16 293 20 368 3.11e-29 114
Msa0722910 MtrunA17_Chr2g0278561 27.221 349 176 7 5 287 13 349 3.53e-29 114
Msa0722910 MtrunA17_Chr2g0284261 26.183 317 173 6 12 272 13 324 4.89e-29 114
Msa0722910 MtrunA17_Chr5g0408001 26.989 352 178 10 12 289 15 361 7.60e-29 113
Msa0722910 MtrunA17_Chr1g0186571 24.923 325 172 6 12 274 18 332 9.69e-29 112
Msa0722910 MtrunA17_Chr2g0290611 27.726 321 167 7 12 272 17 332 1.02e-28 112
Msa0722910 MtrunA17_Chr5g0407991 26.431 367 193 10 1 293 1 364 1.17e-28 113
Msa0722910 MtrunA17_Chr6g0451191 32.895 228 92 5 121 291 1 224 2.68e-28 108
Msa0722910 MtrunA17_Chr3g0081421 33.645 214 122 5 12 213 22 227 3.31e-28 112
Msa0722910 MtrunA17_Chr7g0255561 35.859 198 115 5 12 201 19 212 3.72e-28 112
Msa0722910 MtrunA17_Chr7g0255561 47.368 57 30 0 217 273 281 337 1.53e-11 64.3
Msa0722910 MtrunA17_Chr7g0255581 35.859 198 115 5 12 201 19 212 3.72e-28 112
Msa0722910 MtrunA17_Chr7g0255581 47.368 57 30 0 217 273 281 337 1.53e-11 64.3
Msa0722910 MtrunA17_Chr1g0160111 28.228 333 176 8 1 272 1 331 5.44e-28 111
Msa0722910 MtrunA17_Chr1g0171301 26.059 307 163 7 27 274 36 337 9.05e-28 110
Msa0722910 MtrunA17_Chr1g0186601 24.556 338 183 6 12 287 21 348 1.24e-27 109
Msa0722910 MtrunA17_Chr8g0383731 28.614 332 168 8 25 292 23 349 1.85e-27 109
Msa0722910 MtrunA17_Chr5g0407971 25.485 361 199 8 1 292 5 364 2.19e-27 109
Msa0722910 MtrunA17_Chr3g0129591 28.000 325 167 6 16 277 14 334 3.24e-27 108
Msa0722910 MtrunA17_Chr1g0186641 23.607 305 169 7 27 273 33 331 4.51e-27 108
Msa0722910 MtrunA17_Chr2g0332001 26.608 342 172 8 25 296 56 388 1.27e-26 107
Msa0722910 MtrunA17_Chr1g0186611 22.561 328 186 8 27 296 36 353 2.41e-26 106
Msa0722910 MtrunA17_Chr4g0073241 26.113 337 174 6 27 293 28 359 2.72e-26 106
Msa0722910 MtrunA17_Chr3g0129571 26.911 327 174 9 16 280 16 339 8.28e-26 105
Msa0722910 MtrunA17_Chr6g0463971 26.807 332 184 8 12 286 21 350 1.27e-25 104
Msa0722910 MtrunA17_Chr1g0186561 24.534 322 178 7 12 274 21 336 1.30e-25 104
Msa0722910 MtrunA17_Chr1g0184221 23.077 338 186 6 12 280 21 353 1.87e-25 104
Msa0722910 MtrunA17_Chr7g0263101 25.397 315 173 7 21 277 27 337 8.09e-25 102
Msa0722910 MtrunA17_Chr3g0114711 37.949 195 115 5 13 204 20 211 6.59e-24 100
Msa0722910 MtrunA17_Chr6g0451241 50.515 97 45 1 197 290 4 100 1.07e-23 93.2
Msa0722910 MtrunA17_Chr4g0050941 26.462 359 185 10 12 293 17 373 1.35e-23 99.4
Msa0722910 MtrunA17_Chr3g0114701 26.415 318 176 5 12 272 14 330 1.54e-23 99.0
Msa0722910 MtrunA17_Chr2g0278551 27.928 333 175 8 12 285 17 343 1.90e-22 96.3
Msa0722910 MtrunA17_Chr4g0051021 24.699 332 185 8 12 283 19 345 4.77e-22 94.7
Msa0722910 MtrunA17_Chr1g0177221 31.250 208 138 5 12 216 23 228 4.95e-22 92.8
Msa0722910 MtrunA17_Chr2g0310441 24.579 297 166 6 32 272 35 329 5.06e-22 94.7
Msa0722910 MtrunA17_Chr1g0211801 28.302 212 140 4 25 234 29 230 1.20e-21 92.0
Msa0722910 MtrunA17_Chr8g0334751 25.000 344 195 6 12 293 16 358 3.82e-21 92.0
Msa0722910 MtrunA17_Chr6g0451181 43.119 109 62 0 12 120 17 125 4.65e-21 86.7
Msa0722910 MtrunA17_Chr2g0278541 25.231 325 176 6 12 272 17 338 8.58e-21 91.3
Msa0722910 MtrunA17_Chr8g0334771 28.053 303 160 6 32 278 35 335 8.98e-21 91.3
Msa0722910 MtrunA17_Chr1g0155761 35.669 157 98 3 12 167 26 180 1.39e-20 90.9
Msa0722910 MtrunA17_Chr1g0155761 38.889 72 44 0 214 285 299 370 8.46e-12 65.1
Msa0722910 MtrunA17_Chr3g0129581 25.786 318 173 6 16 272 14 329 3.02e-20 89.4
Msa0722910 MtrunA17_Chr3g0142131 35.625 160 93 3 12 163 25 182 2.25e-18 84.3
Msa0722910 MtrunA17_Chr3g0142131 35.897 78 49 1 214 291 293 369 1.89e-11 63.9
Msa0722910 MtrunA17_Chr8g0334711 29.252 147 104 0 12 158 15 161 6.71e-17 77.8
Msa0722910 MtrunA17_Chr4g0050931 23.220 323 145 9 12 272 17 298 3.44e-15 74.7
Msa0722910 MtrunA17_Chr4g0050891 29.665 209 138 5 5 206 11 217 8.63e-15 73.9
Msa0722910 MtrunA17_Chr5g0441761 27.363 201 139 3 6 205 13 207 1.72e-13 70.1
Msa0722910 MtrunA17_Chr4g0056081 27.461 193 137 2 12 201 19 211 2.10e-13 69.7
Msa0722910 MtrunA17_Chr1g0172891 30.380 79 55 0 195 273 1 79 3.56e-13 65.1
Msa0722910 MtrunA17_Chr4g0051001 28.000 200 137 4 12 206 36 233 4.06e-13 68.6
Msa0722910 MtrunA17_Chr1g0177231 31.707 82 56 0 198 279 26 107 4.46e-13 65.1
Msa0722910 MtrunA17_Chr8g0334721 34.444 90 47 1 214 291 51 140 4.47e-13 65.9
Msa0722910 MtrunA17_Chr2g0278021 39.474 76 46 0 210 285 150 225 1.73e-12 66.6
Msa0722910 MtrunA17_Chr4g0050911 36.641 131 70 5 88 207 12 140 8.25e-12 62.4
Msa0722910 MtrunA17_Chr5g0428881 29.861 144 99 2 11 153 22 164 1.62e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722910 AT5G40230.1 36.047 344 158 4 10 295 23 362 1.93e-62 202
Msa0722910 AT5G40210.1 37.647 340 140 4 8 291 13 336 7.23e-62 199
Msa0722910 AT3G28080.3 41.554 296 154 3 10 295 16 302 1.04e-58 190
Msa0722910 AT5G40240.1 33.728 338 158 5 12 289 24 355 8.20e-55 182
Msa0722910 AT5G40240.3 33.728 338 158 5 12 289 24 355 8.20e-55 182
Msa0722910 AT3G28100.1 37.609 343 147 5 10 291 16 352 1.10e-51 173
Msa0722910 AT5G40240.2 33.136 338 160 6 12 289 38 369 5.92e-50 170
Msa0722910 AT3G28080.1 35.817 349 153 5 10 295 16 356 1.46e-49 168
Msa0722910 AT3G28070.1 37.464 347 149 6 10 295 19 358 9.23e-49 166
Msa0722910 AT4G15540.1 37.237 333 143 4 10 289 19 338 2.00e-48 165
Msa0722910 AT4G15540.2 37.237 333 143 4 10 289 19 338 2.00e-48 165
Msa0722910 AT3G28130.2 35.362 345 166 4 6 295 11 353 2.75e-48 165
Msa0722910 AT3G28080.4 42.056 214 105 3 92 295 9 213 6.86e-47 157
Msa0722910 AT3G28070.2 36.604 265 100 4 92 295 9 266 1.09e-42 147
Msa0722910 AT3G28080.2 34.670 349 149 6 10 295 16 348 1.77e-42 149
Msa0722910 AT3G28050.1 42.932 191 105 1 10 200 14 200 1.39e-38 139
Msa0722910 AT3G28050.1 45.133 113 47 2 198 295 252 364 1.09e-22 96.7
Msa0722910 AT3G28080.5 34.457 267 104 5 92 295 9 267 6.87e-38 135
Msa0722910 AT3G28080.7 34.457 267 104 5 92 295 9 267 6.87e-38 135
Msa0722910 AT3G28080.8 34.457 267 104 5 92 295 9 267 6.87e-38 135
Msa0722910 AT3G28080.6 34.457 267 104 5 92 295 9 267 6.87e-38 135
Msa0722910 AT5G07050.1 29.358 327 168 7 12 276 22 347 7.19e-38 138
Msa0722910 AT3G28130.5 35.907 259 109 5 92 295 11 267 1.57e-37 134
Msa0722910 AT3G28130.1 35.907 259 109 5 92 295 11 267 1.57e-37 134
Msa0722910 AT3G28070.3 37.417 302 122 5 10 250 19 314 4.58e-37 134
Msa0722910 AT3G18200.2 29.483 329 179 9 3 279 30 357 1.14e-36 135
Msa0722910 AT2G39510.1 30.247 324 166 8 11 277 11 331 1.53e-36 134
Msa0722910 AT5G45370.1 27.879 330 174 5 10 285 22 341 1.51e-33 126
Msa0722910 AT4G08300.1 28.793 323 171 8 31 296 34 354 2.05e-33 126
Msa0722910 AT5G45370.2 27.246 345 181 7 10 285 22 365 1.56e-32 124
Msa0722910 AT5G45370.4 27.246 345 181 7 10 285 22 365 1.56e-32 124
Msa0722910 AT4G28040.1 27.469 324 169 5 12 280 12 324 3.95e-31 119
Msa0722910 AT4G28040.5 27.469 324 169 5 12 280 12 324 3.95e-31 119
Msa0722910 AT4G28040.3 27.469 324 169 5 12 280 12 324 3.95e-31 119
Msa0722910 AT4G28040.4 27.469 324 169 5 12 280 12 324 3.95e-31 119
Msa0722910 AT4G28040.2 27.469 324 169 5 12 280 12 324 3.95e-31 119
Msa0722910 AT1G44800.1 28.302 318 168 10 31 291 34 348 7.13e-31 119
Msa0722910 AT3G28100.3 43.000 200 100 2 10 201 16 209 3.12e-30 115
Msa0722910 AT3G28100.2 41.014 217 112 3 10 216 16 226 5.02e-30 114
Msa0722910 AT1G09380.1 28.438 320 162 8 12 269 12 326 1.22e-29 115
Msa0722910 AT1G75500.1 27.385 325 170 8 12 273 24 345 2.28e-29 115
Msa0722910 AT1G75500.2 27.385 325 170 8 12 273 24 345 2.28e-29 115
Msa0722910 AT3G28070.5 32.627 236 91 4 121 295 1 229 2.30e-29 112
Msa0722910 AT4G08290.1 25.948 343 193 7 12 295 17 357 1.09e-28 113
Msa0722910 AT3G28130.6 40.102 197 116 1 6 200 11 207 3.02e-28 108
Msa0722910 AT3G28130.4 40.404 198 116 1 6 201 11 208 3.51e-28 109
Msa0722910 AT2G40900.1 27.077 325 174 7 12 279 15 333 4.21e-28 112
Msa0722910 AT3G53210.1 24.058 345 191 7 6 286 8 345 7.02e-27 108
Msa0722910 AT3G30340.1 24.756 307 169 6 25 273 28 330 1.65e-26 107
Msa0722910 AT3G56620.1 28.076 317 159 8 12 269 15 321 3.38e-26 106
Msa0722910 AT4G19185.1 26.257 358 192 6 10 295 23 380 5.22e-26 106
Msa0722910 AT2G37460.1 24.405 336 195 7 11 290 18 350 1.20e-25 105
Msa0722910 AT1G70260.1 26.409 337 177 9 25 295 29 360 2.30e-25 104
Msa0722910 AT3G28130.3 32.174 230 99 5 121 295 1 228 2.64e-25 101
Msa0722910 AT4G30420.1 25.000 320 178 8 11 272 4 319 3.71e-24 100
Msa0722910 AT4G01440.1 23.810 315 181 5 23 281 25 336 4.00e-24 100
Msa0722910 AT4G30420.2 25.000 320 178 8 11 272 14 329 4.20e-24 100
Msa0722910 AT3G18200.1 30.667 225 105 7 106 279 3 227 1.13e-23 97.4
Msa0722910 AT5G47470.1 24.629 337 190 6 12 290 34 364 3.82e-23 98.2
Msa0722910 AT5G13670.1 23.607 305 173 6 27 273 27 329 4.08e-23 98.2
Msa0722910 AT5G47470.2 24.629 337 190 6 12 290 62 392 5.14e-23 98.2
Msa0722910 AT3G45870.1 24.765 319 177 4 12 267 16 334 7.27e-23 97.4
Msa0722910 AT1G68170.1 26.966 356 174 8 10 296 5 343 1.06e-22 96.7
Msa0722910 AT1G68170.2 26.966 356 174 8 10 296 15 353 1.18e-22 96.7
Msa0722910 AT4G08290.2 32.663 199 128 4 12 206 17 213 1.20e-22 95.5
Msa0722910 AT1G21890.2 37.838 148 89 3 12 158 15 160 2.17e-22 95.9
Msa0722910 AT1G21890.1 37.838 148 89 3 12 158 15 160 2.20e-22 96.3
Msa0722910 AT1G21890.1 39.683 63 38 0 217 279 282 344 1.36e-12 67.8
Msa0722910 AT3G28080.9 43.810 105 59 0 191 295 126 230 3.09e-22 93.2
Msa0722910 AT4G01430.1 26.019 319 177 8 25 285 26 343 1.14e-21 94.0
Msa0722910 AT5G47470.3 23.692 325 186 5 12 280 62 380 1.65e-21 93.6
Msa0722910 AT5G64700.1 25.397 315 171 6 27 279 27 339 2.23e-21 93.2
Msa0722910 AT5G45370.6 26.336 262 125 5 92 285 2 263 3.73e-21 91.3
Msa0722910 AT5G45370.5 26.336 262 125 5 92 285 2 263 3.73e-21 91.3
Msa0722910 AT4G24980.1 27.341 267 145 8 27 275 6 241 1.74e-20 89.4
Msa0722910 AT3G53210.3 29.412 204 129 4 6 201 8 204 1.86e-20 89.0
Msa0722910 AT4G19185.2 26.056 284 138 6 84 295 19 302 5.27e-20 88.6
Msa0722910 AT4G01440.3 24.042 287 159 5 23 253 25 308 1.50e-19 87.4
Msa0722910 AT1G01070.1 27.358 318 170 9 23 283 31 344 3.72e-19 87.0
Msa0722910 AT1G01070.2 29.839 248 115 7 92 283 53 297 7.61e-19 85.5
Msa0722910 AT3G53210.2 23.273 275 142 5 75 286 20 288 1.01e-18 85.1
Msa0722910 AT4G01440.4 29.947 187 125 3 22 205 24 207 2.27e-18 83.2
Msa0722910 AT3G30340.2 30.220 182 118 4 25 201 28 205 3.61e-18 82.8
Msa0722910 AT1G11450.3 25.949 316 177 8 12 272 20 333 4.48e-18 83.6
Msa0722910 AT1G60050.1 23.724 333 188 8 25 293 30 360 4.89e-18 84.0
Msa0722910 AT4G01440.5 23.246 228 122 2 107 281 1 228 1.89e-17 80.5
Msa0722910 AT4G01440.2 23.246 228 122 2 107 281 1 228 1.89e-17 80.5
Msa0722910 AT4G01450.3 29.949 197 123 5 8 201 15 199 4.61e-17 79.3
Msa0722910 AT3G45870.9 27.861 201 134 2 12 201 16 216 5.18e-17 79.7
Msa0722910 AT3G45870.8 27.861 201 134 2 12 201 16 216 7.72e-17 79.7
Msa0722910 AT4G01450.4 29.949 197 123 5 8 201 15 199 8.71e-17 79.0
Msa0722910 AT1G11450.1 27.660 235 115 6 92 272 8 241 1.27e-16 78.2
Msa0722910 AT2G37450.2 23.964 338 180 5 12 295 13 327 1.39e-16 79.3
Msa0722910 AT4G01450.1 29.949 197 123 5 8 201 15 199 2.02e-16 79.0
Msa0722910 AT4G01450.2 29.949 197 123 5 8 201 15 199 2.33e-16 79.0
Msa0722910 AT1G11450.2 27.660 235 115 6 92 272 49 282 2.66e-16 78.2
Msa0722910 AT1G11450.5 27.660 235 115 6 92 272 56 289 2.95e-16 77.8
Msa0722910 AT1G11460.1 22.152 316 190 5 12 272 20 334 4.21e-15 75.1
Msa0722910 AT1G25270.1 32.667 150 91 3 12 156 7 151 4.05e-14 72.4
Msa0722910 AT1G25270.1 37.079 89 48 2 211 296 261 344 5.11e-11 63.2
Msa0722910 AT4G01430.2 25.524 286 154 8 23 250 24 308 7.63e-14 71.2
Msa0722910 AT4G16620.1 20.408 343 215 4 6 292 10 350 1.71e-13 70.5
Msa0722910 AT5G45370.3 25.000 232 106 5 122 285 74 305 2.81e-13 69.7
Msa0722910 AT1G11450.4 28.497 193 134 4 12 202 20 210 3.38e-13 69.3
Msa0722910 AT1G43650.1 32.886 149 98 2 12 159 11 158 4.41e-12 66.2
Msa0722910 AT1G43650.2 32.886 149 98 2 12 159 11 158 4.53e-12 65.5
Msa0722910 AT5G64700.2 30.435 184 117 4 27 201 27 208 6.83e-12 64.7

Find 53 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAAATCAGATTGGATAAT+TGG 0.197562 5_1:+20423421 Msa0722910:CDS
ACTTATTGGTGCAGCATTAT+TGG 0.203191 5_1:+20424691 Msa0722910:intron
ATTTGTTTCCTTCTAATAAT+AGG 0.210664 5_1:-20424999 None:intergenic
TCCAATCTGATTTCCCTAAA+AGG 0.218236 5_1:-20423414 None:intergenic
CAGAAAATTGATGTTGAAAT+TGG 0.226936 5_1:-20419812 None:intergenic
TTCTGCAGATTACTTCTTCT+TGG 0.233740 5_1:+20419830 Msa0722910:CDS
GGAGCTGCTATCATAGTTAT+TGG 0.234600 5_1:+20424712 Msa0722910:CDS
AGTGCAATGACCACTCTTAA+AGG 0.236929 5_1:-20424531 None:intergenic
ACTCATATGTTAATGACTTC+TGG 0.288657 5_1:+20419958 Msa0722910:CDS
ATAGCAAGTATGAAGGTAAA+AGG 0.300566 5_1:-20420033 None:intergenic
GGCACAGTGGTCTCTATTGC+AGG 0.308068 5_1:+20423307 Msa0722910:CDS
AGCAGCCAGGCAAAAGTTAT+TGG 0.314638 5_1:+20423286 Msa0722910:CDS
GTCAGAATTAACAAGCAAAT+TGG 0.319317 5_1:+20419567 Msa0722910:five_prime_UTR
TTGAACATAGCTACATATAT+TGG 0.334507 5_1:-20424507 None:intergenic
GGCAAAGAACCGATCAAAAT+AGG 0.368424 5_1:-20425030 None:intergenic
TACTTCTTCTTGGTTGCCTC+AGG 0.379746 5_1:+20419840 Msa0722910:CDS
AAACAAAAGCATGGATATAT+AGG 0.382758 5_1:+20424822 Msa0722910:CDS
TCATACTTGCTATAATTTCA+AGG 0.384041 5_1:+20420043 Msa0722910:CDS
TTGGGAGACAATCTTTATCT+TGG 0.387204 5_1:+20424573 Msa0722910:CDS
AAATATCAAAATTGTTAGGT+TGG 0.433167 5_1:-20419482 None:intergenic
ATGAAAGCAGCCACAAAAGA+TGG 0.452927 5_1:+20419692 Msa0722910:CDS
TTAATGGCATCATTAATCAA+TGG 0.480091 5_1:-20423361 None:intergenic
AAAATTGATGTTGAAATTGG+AGG 0.500522 5_1:-20419809 None:intergenic
CTATGGTGGAAGAGAGTGGA+TGG 0.506366 5_1:-20419773 None:intergenic
TGAAATTATAGCAAGTATGA+AGG 0.526932 5_1:-20420040 None:intergenic
AGTGGTCATTGCACTTAGCA+TGG 0.527230 5_1:+20424539 Msa0722910:CDS
AATATAGAAATGGGAGCAAG+TGG 0.531385 5_1:+20423385 Msa0722910:CDS
GAGACAATCTTTATCTTGGA+AGG 0.532255 5_1:+20424577 Msa0722910:CDS
AACAATAGCTGAAGCCAACA+TGG 0.534674 5_1:-20419998 None:intergenic
GAAGAAAACATAGAGCCAAA+AGG 0.540600 5_1:-20419748 None:intergenic
ATTGATGTTGAAATTGGAGG+AGG 0.546987 5_1:-20419806 None:intergenic
GTGGTCATTGCACTTAGCAT+GGG 0.547313 5_1:+20424540 Msa0722910:CDS
TAAATTCAGTTCTCCCATGT+TGG 0.547322 5_1:+20419984 Msa0722910:CDS
TCTATTGTCAAACAAAAGCA+TGG 0.559816 5_1:+20424813 Msa0722910:CDS
ACATGGGCATGTCGTAAGAA+AGG 0.565963 5_1:+20424483 Msa0722910:CDS
GCACAGTGGTCTCTATTGCA+GGG 0.571242 5_1:+20423308 Msa0722910:CDS
CACAGTGGTCTCTATTGCAG+GGG 0.584216 5_1:+20423309 Msa0722910:CDS
TGCAGCTCAAATTGTTGAAG+TGG 0.587755 5_1:+20419655 Msa0722910:CDS
CAAAAGCATGGATATATAGG+AGG 0.592000 5_1:+20424825 Msa0722910:exon
TATGTTCAAACCTTTAAGAG+TGG 0.597273 5_1:+20424521 Msa0722910:CDS
AGCATGGATATATAGGAGGA+TGG 0.603612 5_1:+20424829 Msa0722910:exon
TGAAGAATGTTATACTCACA+TGG 0.605157 5_1:+20424466 Msa0722910:CDS
GCAAGTATGAAGGTAAAAGG+AGG 0.605835 5_1:-20420030 None:intergenic
GATATGGGCACAAGCTCAAG+AGG 0.617122 5_1:+20424747 Msa0722910:CDS
TGGTCATTGCACTTAGCATG+GGG 0.620952 5_1:+20424541 Msa0722910:CDS
CAAGTATGAAGGTAAAAGGA+GGG 0.622141 5_1:-20420029 None:intergenic
GCAGCTCAAATTGTTGAAGT+GGG 0.628887 5_1:+20419656 Msa0722910:CDS
GAAGAATGTTATACTCACAT+GGG 0.641061 5_1:+20424467 Msa0722910:CDS
ACAATAGCTGAAGCCAACAT+GGG 0.645656 5_1:-20419997 None:intergenic
TCGGACTAAAGTTAAAGTTG+AGG 0.649103 5_1:+20419512 Msa0722910:five_prime_UTR
GGCAAAAGTTATTGGCACAG+TGG 0.705210 5_1:+20423294 Msa0722910:CDS
GCTCAAATTGTTGAAGTGGG+TGG 0.711164 5_1:+20419659 Msa0722910:CDS
GGTCATTGCACTTAGCATGG+GGG 0.733530 5_1:+20424542 Msa0722910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTATAATTAAAAA+TGG + chr5_1:20424664-20424683 Msa0722910:intron 0.0%
!! ATAAAAATATCAAAATTGTT+AGG - chr5_1:20419489-20419508 None:intergenic 10.0%
!!! ATTTTGATATTTTTATTAGT+CGG + chr5_1:20419493-20419512 Msa0722910:five_prime_UTR 10.0%
!! ATTATTATAAAGATTGAATT+TGG + chr5_1:20419896-20419915 Msa0722910:intron 10.0%
!!! TTATTATTATTTTTTATTGG+TGG + chr5_1:20420373-20420392 Msa0722910:intron 10.0%
!!! TATTATTATTTTTTATTGGT+GGG + chr5_1:20420374-20420393 Msa0722910:intron 10.0%
!! AATAAAAAATTAACATAATG+AGG - chr5_1:20422759-20422778 None:intergenic 10.0%
!!! ATAATATTTCTAAAACTAAA+AGG - chr5_1:20424357-20424376 None:intergenic 10.0%
!! TAAAAATTAATCAATAATCT+TGG - chr5_1:20424654-20424673 None:intergenic 10.0%
!!! ATATATTTTCTTATCATAAA+GGG + chr5_1:20424935-20424954 Msa0722910:three_prime_UTR 10.0%
!! GAAAAAAAATTGTATATTAA+TGG + chr5_1:20424957-20424976 Msa0722910:three_prime_UTR 10.0%
!! GCATATTATATATTATATAC+AGG - chr5_1:20420163-20420182 None:intergenic 15.0%
!! ATCATATGTTTCATATAATA+GGG + chr5_1:20420666-20420685 Msa0722910:intron 15.0%
!!! TATATATACTAGTCATTTTT+GGG + chr5_1:20420788-20420807 Msa0722910:intron 15.0%
!!! TTTTATTTTTAAGGGAATTT+TGG + chr5_1:20420813-20420832 Msa0722910:intron 15.0%
!!! TTTATTTTTAAGGGAATTTT+GGG + chr5_1:20420814-20420833 Msa0722910:intron 15.0%
!! TAAATACTCATTATATATGA+AGG - chr5_1:20422408-20422427 None:intergenic 15.0%
!! ATATCATCTATAATTGAATT+CGG - chr5_1:20422438-20422457 None:intergenic 15.0%
!!! AATAAAACTTGAATACTTTT+AGG + chr5_1:20423054-20423073 Msa0722910:intron 15.0%
!! ATATGTAATTGTAGTATTAA+AGG - chr5_1:20423081-20423100 None:intergenic 15.0%
!!! GATTTGTTATTCTTATTATT+AGG + chr5_1:20424054-20424073 Msa0722910:intron 15.0%
!!! ATAATTTTTCACAAATTTGT+TGG - chr5_1:20424615-20424634 None:intergenic 15.0%
!!! TTAAAAATGGTTTAACTTAT+TGG + chr5_1:20424677-20424696 Msa0722910:intron 15.0%
!!! CATATATTTTCTTATCATAA+AGG + chr5_1:20424934-20424953 Msa0722910:three_prime_UTR 15.0%
!! AAATATCAAAATTGTTAGGT+TGG - chr5_1:20419485-20419504 None:intergenic 20.0%
!!! GGTATGTTGTTTTTATTTTA+TGG + chr5_1:20420064-20420083 Msa0722910:intron 20.0%
!!! TACAGGTTTTTGTTTTTTAA+GGG - chr5_1:20420146-20420165 None:intergenic 20.0%
!!! ATACAGGTTTTTGTTTTTTA+AGG - chr5_1:20420147-20420166 None:intergenic 20.0%
!! ATCCCAATTAATCAAATTTA+AGG + chr5_1:20420397-20420416 Msa0722910:intron 20.0%
!! CTCCTTAAATTTGATTAATT+GGG - chr5_1:20420402-20420421 None:intergenic 20.0%
!! TCTCCTTAAATTTGATTAAT+TGG - chr5_1:20420403-20420422 None:intergenic 20.0%
!!! TTGTTTCTTGTTAATTTTCT+TGG + chr5_1:20420526-20420545 Msa0722910:intron 20.0%
!!! GATGGAAAAAATATTTTTTG+CGG - chr5_1:20420575-20420594 None:intergenic 20.0%
!! TTTATAATATCTGACATGAT+AGG + chr5_1:20420622-20420641 Msa0722910:intron 20.0%
!! GATCATATGTTTCATATAAT+AGG + chr5_1:20420665-20420684 Msa0722910:intron 20.0%
!! AAAAATATATGATATGATCC+AGG + chr5_1:20420706-20420725 Msa0722910:intron 20.0%
!! AAAATATATGATATGATCCA+GGG + chr5_1:20420707-20420726 Msa0722910:intron 20.0%
!!! GTATATATACTAGTCATTTT+TGG + chr5_1:20420787-20420806 Msa0722910:intron 20.0%
!!! TTTTGGGTGTTTTATTTTTA+AGG + chr5_1:20420804-20420823 Msa0722910:intron 20.0%
!!! TTTGGGTGTTTTATTTTTAA+GGG + chr5_1:20420805-20420824 Msa0722910:intron 20.0%
!!! TTATTTTTAAGGGAATTTTG+GGG + chr5_1:20420815-20420834 Msa0722910:intron 20.0%
!!! TGACTAGTTGAAATTTTAAT+TGG + chr5_1:20420844-20420863 Msa0722910:intron 20.0%
!!! TGCATACTTTTTTTTTTTGA+AGG + chr5_1:20421159-20421178 Msa0722910:intron 20.0%
!!! CTATACTTATAAGTTTTTTG+TGG - chr5_1:20421379-20421398 None:intergenic 20.0%
!!! AACAAATATTTGTTTCTGTA+AGG - chr5_1:20421518-20421537 None:intergenic 20.0%
!! TATTCTTAAAACTTATGAGT+GGG + chr5_1:20422169-20422188 Msa0722910:intron 20.0%
!!! TTATTCCACCAAATTTTTTA+GGG - chr5_1:20422546-20422565 None:intergenic 20.0%
!!! TTAGTCTTAGTTTAGTTATT+TGG - chr5_1:20422712-20422731 None:intergenic 20.0%
!! ACAAAGAACTAAAAATTGTA+AGG + chr5_1:20422840-20422859 Msa0722910:intron 20.0%
!!! ACAAGGTTTAATAACATTTT+TGG - chr5_1:20422922-20422941 None:intergenic 20.0%
!!! AAACCTTGTTTTTTAAAACA+AGG + chr5_1:20422933-20422952 Msa0722910:intron 20.0%
!!! AACCTTGTTTTTTAAAACAA+GGG + chr5_1:20422934-20422953 Msa0722910:intron 20.0%
!!! TTTAAAACAAGGGTTTATAA+AGG + chr5_1:20422944-20422963 Msa0722910:intron 20.0%
!!! TAGTAATGAAATTTTGAAAG+TGG - chr5_1:20423173-20423192 None:intergenic 20.0%
!!! TATTTTTTCTTGTATTTGCA+AGG - chr5_1:20423205-20423224 None:intergenic 20.0%
!!! TTAGTTGTGACATTTTATAA+AGG + chr5_1:20423334-20423353 Msa0722910:CDS 20.0%
!!! TAGTTGTGACATTTTATAAA+GGG + chr5_1:20423335-20423354 Msa0722910:CDS 20.0%
!! TGCCATTAAAAATATAGAAA+TGG + chr5_1:20423375-20423394 Msa0722910:CDS 20.0%
!! GCCATTAAAAATATAGAAAT+GGG + chr5_1:20423376-20423395 Msa0722910:CDS 20.0%
!!! TCCCATTTCTATATTTTTAA+TGG - chr5_1:20423380-20423399 None:intergenic 20.0%
!!! ATATTAATAGTTTGTTTACC+TGG - chr5_1:20423498-20423517 None:intergenic 20.0%
!!! AATTGTAGCTGTTTAAATTT+TGG + chr5_1:20424378-20424397 Msa0722910:intron 20.0%
!!! ATTCTTTTCCTATTATTAGA+AGG + chr5_1:20424991-20425010 Msa0722910:three_prime_UTR 20.0%
!! ATTTGTTTCCTTCTAATAAT+AGG - chr5_1:20425002-20425021 None:intergenic 20.0%
!!! CGTCTTACTTTTATAATATC+TGG - chr5_1:20419548-20419567 None:intergenic 25.0%
!! CATTGTTTACAAAAACCTTT+TGG + chr5_1:20419733-20419752 Msa0722910:CDS 25.0%
! AAAATTGATGTTGAAATTGG+AGG - chr5_1:20419812-20419831 None:intergenic 25.0%
! CAGAAAATTGATGTTGAAAT+TGG - chr5_1:20419815-20419834 None:intergenic 25.0%
! TGAAATTATAGCAAGTATGA+AGG - chr5_1:20420043-20420062 None:intergenic 25.0%
!!! TCATACTTGCTATAATTTCA+AGG + chr5_1:20420043-20420062 Msa0722910:CDS 25.0%
! AAATATATGATATGATCCAG+GGG + chr5_1:20420708-20420727 Msa0722910:intron 25.0%
!! AGATTTTAAATAAGTAGTGC+AGG - chr5_1:20420766-20420785 None:intergenic 25.0%
!!! ATTTTAATTGGTTTCCTTAC+CGG + chr5_1:20420856-20420875 Msa0722910:intron 25.0%
!! TGGAAATTTTTCTCATGTTT+TGG - chr5_1:20420886-20420905 None:intergenic 25.0%
! AACACATTACAAAGAGATAT+AGG - chr5_1:20421585-20421604 None:intergenic 25.0%
! TTGTAATGTGTTGTATAAGA+TGG + chr5_1:20421593-20421612 Msa0722910:intron 25.0%
! TGAATAAATATGGGGATAAT+GGG - chr5_1:20421980-20421999 None:intergenic 25.0%
! ATGAATAAATATGGGGATAA+TGG - chr5_1:20421981-20422000 None:intergenic 25.0%
! ATCCCCATATTTATTCATAT+TGG + chr5_1:20421983-20422002 Msa0722910:intron 25.0%
! CACCAATATGAATAAATATG+GGG - chr5_1:20421988-20422007 None:intergenic 25.0%
! CCACCAATATGAATAAATAT+GGG - chr5_1:20421989-20422008 None:intergenic 25.0%
! ACCACCAATATGAATAAATA+TGG - chr5_1:20421990-20422009 None:intergenic 25.0%
! ATACACAAGGTAGTTAATAT+AGG + chr5_1:20422029-20422048 Msa0722910:intron 25.0%
! TAATATAGGTGATATTCATG+TGG + chr5_1:20422043-20422062 Msa0722910:intron 25.0%
! CTATTCTTAAAACTTATGAG+TGG + chr5_1:20422168-20422187 Msa0722910:intron 25.0%
! ATTCTTAAAACTTATGAGTG+GGG + chr5_1:20422170-20422189 Msa0722910:intron 25.0%
!!! GTTCGTTTTTTCTTTTATCA+AGG + chr5_1:20422290-20422309 Msa0722910:intron 25.0%
! ATGTAATCTATTTAATTCCG+TGG - chr5_1:20422506-20422525 None:intergenic 25.0%
! CGGAATTAAATAGATTACAT+TGG + chr5_1:20422506-20422525 Msa0722910:intron 25.0%
!!! CTTATTCCACCAAATTTTTT+AGG - chr5_1:20422547-20422566 None:intergenic 25.0%
!!! AATTTGGTGGAATAAGTTTT+AGG + chr5_1:20422551-20422570 Msa0722910:intron 25.0%
!!! TAGTTCTGTTTTGAATATGT+GGG - chr5_1:20422650-20422669 None:intergenic 25.0%
!!! TTAGTTCTGTTTTGAATATG+TGG - chr5_1:20422651-20422670 None:intergenic 25.0%
!! TCTATCAAAAAATGATGATG+CGG - chr5_1:20422812-20422831 None:intergenic 25.0%
!!! CTGATTTTAGTGCAATATAT+TGG - chr5_1:20422879-20422898 None:intergenic 25.0%
! TCAGATTTAACACATATTGT+AGG + chr5_1:20422895-20422914 Msa0722910:intron 25.0%
!!! AACCCTTGTTTTAAAAAACA+AGG - chr5_1:20422939-20422958 None:intergenic 25.0%
! ATCAATTGTAACATCTAAGA+AGG + chr5_1:20422986-20423005 Msa0722910:intron 25.0%
!!! GATATTTTTGAAAATCACCT+TGG - chr5_1:20423028-20423047 None:intergenic 25.0%
! TTAATGGCATCATTAATCAA+TGG - chr5_1:20423364-20423383 None:intergenic 25.0%
!! GATATGATAAAGCATGTTTT+CGG - chr5_1:20423821-20423840 None:intergenic 25.0%
!!! TTTTTTGTCAAGTAGTTTAG+TGG - chr5_1:20424230-20424249 None:intergenic 25.0%
!!! CTGTTTAAATTTTGGTTTTG+TGG + chr5_1:20424386-20424405 Msa0722910:intron 25.0%
! TGTGGTTATTCATTTAATCA+TGG + chr5_1:20424404-20424423 Msa0722910:intron 25.0%
! AGTTGCCTATAAATGATTAA+AGG - chr5_1:20424433-20424452 None:intergenic 25.0%
! TTGAACATAGCTACATATAT+TGG - chr5_1:20424510-20424529 None:intergenic 25.0%
!! AAACAAAAGCATGGATATAT+AGG + chr5_1:20424822-20424841 Msa0722910:CDS 25.0%
GTCAGAATTAACAAGCAAAT+TGG + chr5_1:20419567-20419586 Msa0722910:five_prime_UTR 30.0%
! AATACTCATTCCATCTTTTG+TGG - chr5_1:20419705-20419724 None:intergenic 30.0%
! TACTATTTTGTTCATACCTG+AGG - chr5_1:20419859-20419878 None:intergenic 30.0%
TTTGGCAAAATAGAGTGATA+TGG + chr5_1:20419914-20419933 Msa0722910:intron 30.0%
ACTCATATGTTAATGACTTC+TGG + chr5_1:20419958-20419977 Msa0722910:CDS 30.0%
ATAGCAAGTATGAAGGTAAA+AGG - chr5_1:20420036-20420055 None:intergenic 30.0%
GTCTAATCTCTTTCATAGAT+AGG + chr5_1:20420443-20420462 Msa0722910:intron 30.0%
CAAAACACTACAATACAACT+CGG - chr5_1:20420509-20420528 None:intergenic 30.0%
TAGATGTCAACTAACTAAGA+TGG - chr5_1:20420593-20420612 None:intergenic 30.0%
TTGCCATCAAATTATTGTGA+GGG - chr5_1:20420925-20420944 None:intergenic 30.0%
TTTGCCATCAAATTATTGTG+AGG - chr5_1:20420926-20420945 None:intergenic 30.0%
ATTAAAACCATCTGAACATG+GGG - chr5_1:20421403-20421422 None:intergenic 30.0%
GATTAAAACCATCTGAACAT+GGG - chr5_1:20421404-20421423 None:intergenic 30.0%
!!! ATGTTCAGATGGTTTTAATC+CGG + chr5_1:20421404-20421423 Msa0722910:intron 30.0%
CAAAATCTTTGACAAAATGC+CGG - chr5_1:20421426-20421445 None:intergenic 30.0%
!! CAAAGATTTTGGTATGTTTG+TGG + chr5_1:20421435-20421454 Msa0722910:intron 30.0%
!! TTGTGGTGATGATATTTTTC+AGG + chr5_1:20421452-20421471 Msa0722910:intron 30.0%
!!! TTTTTCAGGCAATGACTTTT+TGG + chr5_1:20421466-20421485 Msa0722910:intron 30.0%
!! TTGTTTCTGTAAGGTTTGAA+GGG - chr5_1:20421509-20421528 None:intergenic 30.0%
!! TTTGTTTCTGTAAGGTTTGA+AGG - chr5_1:20421510-20421529 None:intergenic 30.0%
TTATCTGGTCCTTCATAATT+CGG - chr5_1:20421546-20421565 None:intergenic 30.0%
CTAAGATCATTCGTATTATC+TGG - chr5_1:20421561-20421580 None:intergenic 30.0%
CAGATAATACGAATGATCTT+AGG + chr5_1:20421559-20421578 Msa0722910:intron 30.0%
TTTGGATAAATGTGTGTCAA+AGG + chr5_1:20421650-20421669 Msa0722910:intron 30.0%
TCTCAAGATTGATATTAGCA+AGG + chr5_1:20421782-20421801 Msa0722910:intron 30.0%
TTGCTTATGAACTTTGACAA+GGG + chr5_1:20421915-20421934 Msa0722910:intron 30.0%
CCCATATTTATTCATATTGG+TGG + chr5_1:20421986-20422005 Msa0722910:intron 30.0%
! TTTATTCATATTGGTGGTTG+AGG + chr5_1:20421992-20422011 Msa0722910:intron 30.0%
! TTATTCATATTGGTGGTTGA+GGG + chr5_1:20421993-20422012 Msa0722910:intron 30.0%
! TTCGTTTTCAAACAACAGAT+GGG - chr5_1:20422099-20422118 None:intergenic 30.0%
! ATTCGTTTTCAAACAACAGA+TGG - chr5_1:20422100-20422119 None:intergenic 30.0%
TTATCTCTACCAATCATCAA+AGG - chr5_1:20422267-20422286 None:intergenic 30.0%
TTTAGAAACGAATAAATGCG+TGG + chr5_1:20422319-20422338 Msa0722910:intron 30.0%
! AGAAGATGATCAATGTGTTT+TGG + chr5_1:20422460-20422479 Msa0722910:intron 30.0%
!! AGTTCTGTTTTGAATATGTG+GGG - chr5_1:20422649-20422668 None:intergenic 30.0%
AAGACTAACGATAAATCAGA+AGG + chr5_1:20422724-20422743 Msa0722910:intron 30.0%
! CAAGTGGAATTTTCCTTTTA+GGG + chr5_1:20423401-20423420 Msa0722910:CDS 30.0%
!! TTCTCTTTTGTTTATTGTCC+AGG + chr5_1:20423477-20423496 Msa0722910:CDS 30.0%
TCTACGACCATAATTAAATC+CGG - chr5_1:20423596-20423615 None:intergenic 30.0%
ACATGCTTTATCATATCGAT+AGG + chr5_1:20423824-20423843 Msa0722910:intron 30.0%
CATGCTTTATCATATCGATA+GGG + chr5_1:20423825-20423844 Msa0722910:intron 30.0%
ATGCTTTATCATATCGATAG+GGG + chr5_1:20423826-20423845 Msa0722910:intron 30.0%
CAAGTCTGTATATACATAGA+TGG - chr5_1:20423870-20423889 None:intergenic 30.0%
CATCTATGTATATACAGACT+TGG + chr5_1:20423868-20423887 Msa0722910:intron 30.0%
TAAGCTAACGTAGACATTTA+AGG + chr5_1:20424327-20424346 Msa0722910:intron 30.0%
AAGCTAACGTAGACATTTAA+GGG + chr5_1:20424328-20424347 Msa0722910:intron 30.0%
! TCATTTATAGGCAACTTTTG+TGG + chr5_1:20424437-20424456 Msa0722910:intron 30.0%
! TATGTTCAAACCTTTAAGAG+TGG + chr5_1:20424521-20424540 Msa0722910:CDS 30.0%
! TTGGATTTTATGCTGTGATA+TGG + chr5_1:20424731-20424750 Msa0722910:CDS 30.0%
! TGGATTTTATGCTGTGATAT+GGG + chr5_1:20424732-20424751 Msa0722910:CDS 30.0%
!! TGCTTTTGTTTGACAATAGA+GGG - chr5_1:20424813-20424832 None:intergenic 30.0%
!! ATGCTTTTGTTTGACAATAG+AGG - chr5_1:20424814-20424833 None:intergenic 30.0%
TCTATTGTCAAACAAAAGCA+TGG + chr5_1:20424813-20424832 Msa0722910:CDS 30.0%
!!! TATGATCGTCCTATTTTGAT+CGG + chr5_1:20425021-20425040 Msa0722910:three_prime_UTR 30.0%
TCGGACTAAAGTTAAAGTTG+AGG + chr5_1:20419512-20419531 Msa0722910:five_prime_UTR 35.0%
CAGACAGAGACAAGAAAAAA+TGG + chr5_1:20419598-20419617 Msa0722910:exon 35.0%
GAAGAAAACATAGAGCCAAA+AGG - chr5_1:20419751-20419770 None:intergenic 35.0%
ATTGATGTTGAAATTGGAGG+AGG - chr5_1:20419809-20419828 None:intergenic 35.0%
TTCTGCAGATTACTTCTTCT+TGG + chr5_1:20419830-20419849 Msa0722910:CDS 35.0%
TAAATTCAGTTCTCCCATGT+TGG + chr5_1:20419984-20420003 Msa0722910:CDS 35.0%
CAAGTATGAAGGTAAAAGGA+GGG - chr5_1:20420032-20420051 None:intergenic 35.0%
TTTAAATAAGTAGTGCAGGC+AGG - chr5_1:20420762-20420781 None:intergenic 35.0%
AGGGACAAAAATTAATGAGG+TGG - chr5_1:20420906-20420925 None:intergenic 35.0%
GTGAGGGACAAAAATTAATG+AGG - chr5_1:20420909-20420928 None:intergenic 35.0%
TGTCCCTCACAATAATTTGA+TGG + chr5_1:20420919-20420938 Msa0722910:intron 35.0%
AGCTAGGAATTGTATGTAGT+GGG - chr5_1:20421239-20421258 None:intergenic 35.0%
CCAAACATAGATATGAAGAG+TGG - chr5_1:20421278-20421297 None:intergenic 35.0%
CCACTCTTCATATCTATGTT+TGG + chr5_1:20421275-20421294 Msa0722910:intron 35.0%
GGATTAAAACCATCTGAACA+TGG - chr5_1:20421405-20421424 None:intergenic 35.0%
! CGGCATTTTGTCAAAGATTT+TGG + chr5_1:20421424-20421443 Msa0722910:intron 35.0%
!!! ATGACTTTTTGGTTGGATTG+CGG + chr5_1:20421477-20421496 Msa0722910:intron 35.0%
TGTTTGATCCCGAATTATGA+AGG + chr5_1:20421534-20421553 Msa0722910:intron 35.0%
TATCTGGTCCTTCATAATTC+GGG - chr5_1:20421545-20421564 None:intergenic 35.0%
TAATCGACTGAAACGATGTT+TGG + chr5_1:20421632-20421651 Msa0722910:intron 35.0%
!! CTTCATTGAGTGGATTATCT+TGG - chr5_1:20421730-20421749 None:intergenic 35.0%
AGATAATCCACTCAATGAAG+AGG + chr5_1:20421730-20421749 Msa0722910:intron 35.0%
GTTGCTTATGAACTTTGACA+AGG + chr5_1:20421914-20421933 Msa0722910:intron 35.0%
TGCTTATGAACTTTGACAAG+GGG + chr5_1:20421916-20421935 Msa0722910:intron 35.0%
!! ATGGGTACTGGAAAGTATTT+GGG + chr5_1:20422237-20422256 Msa0722910:intron 35.0%
! TTGGGATTACCTTTGATGAT+TGG + chr5_1:20422255-20422274 Msa0722910:intron 35.0%
TGATGATTGGTAGAGATAAG+AGG + chr5_1:20422268-20422287 Msa0722910:intron 35.0%
CATCTATAATTGAATTCGGC+AGG - chr5_1:20422434-20422453 None:intergenic 35.0%
!! AGATGATCAATGTGTTTTGG+TGG + chr5_1:20422463-20422482 Msa0722910:intron 35.0%
!!! GATGATCAATGTGTTTTGGT+GGG + chr5_1:20422464-20422483 Msa0722910:intron 35.0%
!!! ATGATCAATGTGTTTTGGTG+GGG + chr5_1:20422465-20422484 Msa0722910:intron 35.0%
TGGCATTGCCCTAAAAAATT+TGG + chr5_1:20422535-20422554 Msa0722910:intron 35.0%
CATTGCCCTAAAAAATTTGG+TGG + chr5_1:20422538-20422557 Msa0722910:intron 35.0%
! CAAAGCTTTTAATCTCGCTA+TGG + chr5_1:20422579-20422598 Msa0722910:intron 35.0%
! TAGCTTATAGCGATTTTCGT+AGG + chr5_1:20422602-20422621 Msa0722910:intron 35.0%
! AAATGATGATGCGGAAAACA+AGG - chr5_1:20422803-20422822 None:intergenic 35.0%
!! GTAACATCTAAGAAGGTGTT+TGG + chr5_1:20422993-20423012 Msa0722910:intron 35.0%
! GAAAGTGGACATTTTCTAAC+CGG - chr5_1:20423158-20423177 None:intergenic 35.0%
! ATACTGTGATGTGCATTTTC+AGG + chr5_1:20423236-20423255 Msa0722910:intron 35.0%
AATATAGAAATGGGAGCAAG+TGG + chr5_1:20423385-20423404 Msa0722910:CDS 35.0%
! GCAAGTGGAATTTTCCTTTT+AGG + chr5_1:20423400-20423419 Msa0722910:CDS 35.0%
!! TCCTTTTAGGGAAATCAGAT+TGG + chr5_1:20423413-20423432 Msa0722910:CDS 35.0%
TCCAATCTGATTTCCCTAAA+AGG - chr5_1:20423417-20423436 None:intergenic 35.0%
GGGAAATCAGATTGGATAAT+TGG + chr5_1:20423421-20423440 Msa0722910:CDS 35.0%
GACCATAATTAAATCCGGAT+CGG - chr5_1:20423591-20423610 None:intergenic 35.0%
CAAAATCGTAGTTGCAATTG+TGG + chr5_1:20423653-20423672 Msa0722910:intron 35.0%
GCAATTGTGGTGCAATATAA+AGG + chr5_1:20423666-20423685 Msa0722910:intron 35.0%
TGAATGTTGCCACAATACAA+TGG + chr5_1:20423763-20423782 Msa0722910:intron 35.0%
ATATACAGACTTGGATTGTC+AGG + chr5_1:20423877-20423896 Msa0722910:intron 35.0%
TATACAGACTTGGATTGTCA+GGG + chr5_1:20423878-20423897 Msa0722910:intron 35.0%
TACCACAAAACAGCAACAAA+TGG - chr5_1:20423931-20423950 None:intergenic 35.0%
ACAGATAGCAACTCTTTATC+AGG - chr5_1:20424014-20424033 None:intergenic 35.0%
GACGTTGCATATTATATGCA+AGG + chr5_1:20424147-20424166 Msa0722910:intron 35.0%
TGCATATTATATGCAAGGAC+CGG + chr5_1:20424152-20424171 Msa0722910:intron 35.0%
CATTTAAATGTGGAGAAGTG+AGG - chr5_1:20424195-20424214 None:intergenic 35.0%
AGAGCTCACACATTTAAATG+TGG - chr5_1:20424205-20424224 None:intergenic 35.0%
GGCTGCCTTTAATCATTTAT+AGG + chr5_1:20424425-20424444 Msa0722910:intron 35.0%
! TAGCATGGGGGTAATATTTT+TGG + chr5_1:20424554-20424573 Msa0722910:CDS 35.0%
! AGCATGGGGGTAATATTTTT+GGG + chr5_1:20424555-20424574 Msa0722910:CDS 35.0%
TTGGGAGACAATCTTTATCT+TGG + chr5_1:20424573-20424592 Msa0722910:CDS 35.0%
GAGACAATCTTTATCTTGGA+AGG + chr5_1:20424577-20424596 Msa0722910:CDS 35.0%
ACTTATTGGTGCAGCATTAT+TGG + chr5_1:20424691-20424710 Msa0722910:intron 35.0%
!! GCTTTTGTTTGACAATAGAG+GGG - chr5_1:20424812-20424831 None:intergenic 35.0%
! CAAAAGCATGGATATATAGG+AGG + chr5_1:20424825-20424844 Msa0722910:exon 35.0%
!!! CTTTTCTAAGGTGGTAAACA+TGG + chr5_1:20424860-20424879 Msa0722910:three_prime_UTR 35.0%
AGACAAGAAAAAATGGCGAG+TGG + chr5_1:20419605-20419624 Msa0722910:exon 40.0%
TGCAGCTCAAATTGTTGAAG+TGG + chr5_1:20419655-20419674 Msa0722910:CDS 40.0%
GCAGCTCAAATTGTTGAAGT+GGG + chr5_1:20419656-20419675 Msa0722910:CDS 40.0%
ATGAAAGCAGCCACAAAAGA+TGG + chr5_1:20419692-20419711 Msa0722910:CDS 40.0%
!! TTTTCTATGGTGGAAGAGAG+TGG - chr5_1:20419780-20419799 None:intergenic 40.0%
ACAATAGCTGAAGCCAACAT+GGG - chr5_1:20420000-20420019 None:intergenic 40.0%
AACAATAGCTGAAGCCAACA+TGG - chr5_1:20420001-20420020 None:intergenic 40.0%
GCAAGTATGAAGGTAAAAGG+AGG - chr5_1:20420033-20420052 None:intergenic 40.0%
TACCAACTGAGCTAAGTTCA+CGG + chr5_1:20420191-20420210 Msa0722910:intron 40.0%
TCATAGATAGGATACGTTCC+CGG + chr5_1:20420455-20420474 Msa0722910:intron 40.0%
TATATGATATGATCCAGGGG+CGG + chr5_1:20420711-20420730 Msa0722910:intron 40.0%
!! TTTCTCATGTTTTGGACTGC+CGG - chr5_1:20420878-20420897 None:intergenic 40.0%
CTAGGAATTGTATGTAGTGG+GGG - chr5_1:20421237-20421256 None:intergenic 40.0%
GCTAGGAATTGTATGTAGTG+GGG - chr5_1:20421238-20421257 None:intergenic 40.0%
GAGCTAGGAATTGTATGTAG+TGG - chr5_1:20421240-20421259 None:intergenic 40.0%
TGAAGAGTGGATCATATCAG+TGG - chr5_1:20421265-20421284 None:intergenic 40.0%
!! TCAGGCAATGACTTTTTGGT+TGG + chr5_1:20421470-20421489 Msa0722910:intron 40.0%
TCAATGAAGAGGAAGTCGAA+GGG + chr5_1:20421741-20421760 Msa0722910:intron 40.0%
!! TAGCAAGGCTTTAGATAGAG+TGG + chr5_1:20421797-20421816 Msa0722910:intron 40.0%
!! AGGCTTTAGATAGAGTGGAT+TGG + chr5_1:20421802-20421821 Msa0722910:intron 40.0%
!! GGCTTTAGATAGAGTGGATT+GGG + chr5_1:20421803-20421822 Msa0722910:intron 40.0%
!! GCTTTAGATAGAGTGGATTG+GGG + chr5_1:20421804-20421823 Msa0722910:intron 40.0%
TAACACACATCATCATCCAC+TGG - chr5_1:20421878-20421897 None:intergenic 40.0%
GCTTATGAACTTTGACAAGG+GGG + chr5_1:20421917-20421936 Msa0722910:intron 40.0%
TCTCTCGACTCTAATACACA+AGG + chr5_1:20422016-20422035 Msa0722910:intron 40.0%
! ACGAATGTTTCTTGTTGTGC+AGG + chr5_1:20422114-20422133 Msa0722910:intron 40.0%
! CGAATGTTTCTTGTTGTGCA+GGG + chr5_1:20422115-20422134 Msa0722910:intron 40.0%
CTTAAAACTTATGAGTGGGG+AGG + chr5_1:20422173-20422192 Msa0722910:intron 40.0%
GAGGATTTGTCACGCATTAT+TGG + chr5_1:20422201-20422220 Msa0722910:intron 40.0%
!! GATGGGTACTGGAAAGTATT+TGG + chr5_1:20422236-20422255 Msa0722910:intron 40.0%
AGAAACGAATAAATGCGTGG+AGG + chr5_1:20422322-20422341 Msa0722910:intron 40.0%
GAAACGAATAAATGCGTGGA+GGG + chr5_1:20422323-20422342 Msa0722910:intron 40.0%
AAACGAATAAATGCGTGGAG+GGG + chr5_1:20422324-20422343 Msa0722910:intron 40.0%
ATAGATTACATTGGAACGCG+TGG + chr5_1:20422515-20422534 Msa0722910:intron 40.0%
!! TGTTTTGAATATGTGGGGCT+GGG - chr5_1:20422644-20422663 None:intergenic 40.0%
!! TGTGATGTGCATTTTCAGGA+TGG + chr5_1:20423240-20423259 Msa0722910:intron 40.0%
! TATGAAAAAGCATAGCAGCC+AGG + chr5_1:20423273-20423292 Msa0722910:CDS 40.0%
GAGAACCACACAAGTAAATG+TGG + chr5_1:20423565-20423584 Msa0722910:intron 40.0%
AACCGTAATAGCTGTTGCAT+TGG + chr5_1:20423729-20423748 Msa0722910:intron 40.0%
AGCCAATGCAACAGCTATTA+CGG - chr5_1:20423734-20423753 None:intergenic 40.0%
TGTTGCGAACCATTGTATTG+TGG - chr5_1:20423775-20423794 None:intergenic 40.0%
! GTGTTTATCACTAGCTCTTC+TGG - chr5_1:20423909-20423928 None:intergenic 40.0%
!!! CACCATTTGTTGCTGTTTTG+TGG + chr5_1:20423926-20423945 Msa0722910:intron 40.0%
ATTGTAGCTCTCATTGCAGA+GGG + chr5_1:20423963-20423982 Msa0722910:intron 40.0%
CAGAGGGAAATTCAAATGCT+TGG + chr5_1:20423979-20423998 Msa0722910:intron 40.0%
TACCAACTAAGCTAAGCTCA+CGG - chr5_1:20424125-20424144 None:intergenic 40.0%
! TGAGCTTAGCTTAGTTGGTA+GGG + chr5_1:20424125-20424144 Msa0722910:intron 40.0%
AGTGCAATGACCACTCTTAA+AGG - chr5_1:20424534-20424553 None:intergenic 40.0%
GGAGCTGCTATCATAGTTAT+TGG + chr5_1:20424712-20424731 Msa0722910:CDS 40.0%
AGCATGGATATATAGGAGGA+TGG + chr5_1:20424829-20424848 Msa0722910:exon 40.0%
!! ATGGAGACTCTGCTTTTCTA+AGG + chr5_1:20424848-20424867 Msa0722910:three_prime_UTR 40.0%
CAAGAAAAAATGGCGAGTGG+AGG + chr5_1:20419608-20419627 Msa0722910:exon 45.0%
GCTCAAATTGTTGAAGTGGG+TGG + chr5_1:20419659-20419678 Msa0722910:CDS 45.0%
! GAGGAGCTCTTTTTCTATGG+TGG - chr5_1:20419790-20419809 None:intergenic 45.0%
! GAGGAGGAGCTCTTTTTCTA+TGG - chr5_1:20419793-20419812 None:intergenic 45.0%
TACTTCTTCTTGGTTGCCTC+AGG + chr5_1:20419840-20419859 Msa0722910:CDS 45.0%
ACCAACTGAGCTAAGTTCAC+GGG + chr5_1:20420192-20420211 Msa0722910:intron 45.0%
AGAAAAGACAAGCTACCCAC+CGG - chr5_1:20420477-20420496 None:intergenic 45.0%
AGAGTGGATCATATCAGTGG+CGG - chr5_1:20421262-20421281 None:intergenic 45.0%
GTATAGTCCCCATGTTCAGA+TGG + chr5_1:20421393-20421412 Msa0722910:intron 45.0%
TCGACTTCCTCTTCATTGAG+TGG - chr5_1:20421740-20421759 None:intergenic 45.0%
CTCAATGAAGAGGAAGTCGA+AGG + chr5_1:20421740-20421759 Msa0722910:intron 45.0%
GAAGGGAGGGAGAGAAAAAT+GGG + chr5_1:20421758-20421777 Msa0722910:intron 45.0%
GAATGGGAGTCAGTGAGAAA+TGG + chr5_1:20421850-20421869 Msa0722910:intron 45.0%
TCAGTGAGAAATGGATCCAG+TGG + chr5_1:20421859-20421878 Msa0722910:intron 45.0%
CATGTGGTACAAGTAAGTCG+CGG + chr5_1:20422059-20422078 Msa0722910:intron 45.0%
! TATTGGTGTCCAGCATGTGA+TGG + chr5_1:20422218-20422237 Msa0722910:intron 45.0%
! ATTGGTGTCCAGCATGTGAT+GGG + chr5_1:20422219-20422238 Msa0722910:intron 45.0%
GACAAGCATTATCGAAGGCA+GGG + chr5_1:20422346-20422365 Msa0722910:intron 45.0%
!!! ATCAATGTGTTTTGGTGGGG+AGG + chr5_1:20422468-20422487 Msa0722910:intron 45.0%
!! CTGTTTTGAATATGTGGGGC+TGG - chr5_1:20422645-20422664 None:intergenic 45.0%
GTGTTTGGTACTAGAGACCA+AGG + chr5_1:20423008-20423027 Msa0722910:intron 45.0%
CTATGACTCTGACTGTGATC+CGG + chr5_1:20423136-20423155 Msa0722910:intron 45.0%
AGCAGCCAGGCAAAAGTTAT+TGG + chr5_1:20423286-20423305 Msa0722910:CDS 45.0%
! CTGTGCCAATAACTTTTGCC+TGG - chr5_1:20423294-20423313 None:intergenic 45.0%
GGCAAAAGTTATTGGCACAG+TGG + chr5_1:20423294-20423313 Msa0722910:CDS 45.0%
ATCGGCCACATTTACTTGTG+TGG - chr5_1:20423573-20423592 None:intergenic 45.0%
ACAAGTAAATGTGGCCGATC+CGG + chr5_1:20423574-20423593 Msa0722910:intron 45.0%
GGCCGATCCGGATTTAATTA+TGG + chr5_1:20423586-20423605 Msa0722910:intron 45.0%
CTCTGCAATGAGAGCTACAA+TGG - chr5_1:20423964-20423983 None:intergenic 45.0%
CATTGTAGCTCTCATTGCAG+AGG + chr5_1:20423962-20423981 Msa0722910:intron 45.0%
ACCAACTAAGCTAAGCTCAC+GGG - chr5_1:20424124-20424143 None:intergenic 45.0%
GTGAGCTTAGCTTAGTTGGT+AGG + chr5_1:20424124-20424143 Msa0722910:intron 45.0%
ACATGGGCATGTCGTAAGAA+AGG + chr5_1:20424483-20424502 Msa0722910:CDS 45.0%
AGTGGTCATTGCACTTAGCA+TGG + chr5_1:20424539-20424558 Msa0722910:CDS 45.0%
GTGGTCATTGCACTTAGCAT+GGG + chr5_1:20424540-20424559 Msa0722910:CDS 45.0%
TGGTCATTGCACTTAGCATG+GGG + chr5_1:20424541-20424560 Msa0722910:CDS 45.0%
!! GAGACTCTGCTTTTCTAAGG+TGG + chr5_1:20424851-20424870 Msa0722910:three_prime_UTR 45.0%
!!! GAATTATTATTATTTTTTAT+TGG + chr5_1:20420370-20420389 Msa0722910:intron 5.0%
! CTATGGTGGAAGAGAGTGGA+TGG - chr5_1:20419776-20419795 None:intergenic 50.0%
CCAACTGAGCTAAGTTCACG+GGG + chr5_1:20420193-20420212 Msa0722910:intron 50.0%
TAGATAGGATACGTTCCCGG+TGG + chr5_1:20420458-20420477 Msa0722910:intron 50.0%
AGATAGGATACGTTCCCGGT+GGG + chr5_1:20420459-20420478 Msa0722910:intron 50.0%
GAAAAGACAAGCTACCCACC+GGG - chr5_1:20420476-20420495 None:intergenic 50.0%
!! CATGTTTTGGACTGCCGGTA+AGG - chr5_1:20420873-20420892 None:intergenic 50.0%
! ATCATATCAGTGGCGGAGCT+AGG - chr5_1:20421255-20421274 None:intergenic 50.0%
ACGTGTTGTCCAGCATAGAG+TGG - chr5_1:20421698-20421717 None:intergenic 50.0%
ATGAAGAGGAAGTCGAAGGG+AGG + chr5_1:20421744-20421763 Msa0722910:intron 50.0%
TGAAGAGGAAGTCGAAGGGA+GGG + chr5_1:20421745-20421764 Msa0722910:intron 50.0%
CGAAGGGAGGGAGAGAAAAA+TGG + chr5_1:20421757-20421776 Msa0722910:intron 50.0%
TCGTGGTGTGCTTATGCGAA+TGG + chr5_1:20421833-20421852 Msa0722910:intron 50.0%
CGTGGTGTGCTTATGCGAAT+GGG + chr5_1:20421834-20421853 Msa0722910:intron 50.0%
!! ATGGGGATAATGGGTCACCT+TGG - chr5_1:20421971-20421990 None:intergenic 50.0%
AACAACAGATGGGACACCAC+TGG - chr5_1:20422089-20422108 None:intergenic 50.0%
TTCCAGTACCCATCACATGC+TGG - chr5_1:20422230-20422249 None:intergenic 50.0%
GAGGGGACAAGCATTATCGA+AGG + chr5_1:20422341-20422360 Msa0722910:intron 50.0%
GGACAAGCATTATCGAAGGC+AGG + chr5_1:20422345-20422364 Msa0722910:intron 50.0%
AGCATTATCGAAGGCAGGGA+AGG + chr5_1:20422350-20422369 Msa0722910:intron 50.0%
!!! ATGTGTTTTGGTGGGGAGGA+AGG + chr5_1:20422472-20422491 Msa0722910:intron 50.0%
GGAGGAAGGAGTAACAACCA+CGG + chr5_1:20422486-20422505 Msa0722910:intron 50.0%
! AGCGATTTTCGTAGGAGCTG+AGG + chr5_1:20422610-20422629 Msa0722910:intron 50.0%
GCACAGTGGTCTCTATTGCA+GGG + chr5_1:20423308-20423327 Msa0722910:CDS 50.0%
CACAGTGGTCTCTATTGCAG+GGG + chr5_1:20423309-20423328 Msa0722910:CDS 50.0%
TCCCGTGAGCTTAGCTTAGT+TGG + chr5_1:20424120-20424139 Msa0722910:intron 50.0%
AAGGACCGGTGTTTGAACTC+CGG + chr5_1:20424166-20424185 Msa0722910:intron 50.0%
! ATGTGGAGAAGTGAGGTGTC+CGG - chr5_1:20424188-20424207 None:intergenic 50.0%
GGTCATTGCACTTAGCATGG+GGG + chr5_1:20424542-20424561 Msa0722910:CDS 50.0%
GATATGGGCACAAGCTCAAG+AGG + chr5_1:20424747-20424766 Msa0722910:CDS 50.0%
CCCCGTGAACTTAGCTCAGT+TGG - chr5_1:20420196-20420215 None:intergenic 55.0%
GGAGCCACTCACATCACTGT+GGG + chr5_1:20420732-20420751 Msa0722910:intron 55.0%
GAGCCACTCACATCACTGTG+GGG + chr5_1:20420733-20420752 Msa0722910:intron 55.0%
AGCCACTCACATCACTGTGG+GGG + chr5_1:20420734-20420753 Msa0722910:intron 55.0%
GGAGCAGTCAGTGTTTGACG+AGG + chr5_1:20421671-20421690 Msa0722910:intron 55.0%
TGACGAGGTCCACTCTATGC+TGG + chr5_1:20421686-20421705 Msa0722910:intron 55.0%
!! GTGGATTGGGGCTTTCTTCG+TGG + chr5_1:20421816-20421835 Msa0722910:intron 55.0%
AGCCTATTGTACCCAGCCGA+GGG + chr5_1:20421940-20421959 Msa0722910:intron 55.0%
AACCCTCGGCTGGGTACAAT+AGG - chr5_1:20421945-20421964 None:intergenic 55.0%
! CTTGTTGTGCAGGGCCAATG+TGG + chr5_1:20422124-20422143 Msa0722910:intron 55.0%
ACGCTGTGCTTCCACCACAT+TGG - chr5_1:20422141-20422160 None:intergenic 55.0%
!! GTCCAGCATGTGATGGGTAC+TGG + chr5_1:20422225-20422244 Msa0722910:intron 55.0%
GGCACAGTGGTCTCTATTGC+AGG + chr5_1:20423307-20423326 Msa0722910:CDS 55.0%
GGTGTCCGGAGTTCAAACAC+CGG - chr5_1:20424174-20424193 None:intergenic 55.0%
CGGAGCCACTCACATCACTG+TGG + chr5_1:20420731-20420750 Msa0722910:intron 60.0%
AGCCCCCACAGTGATGTGAG+TGG - chr5_1:20420739-20420758 None:intergenic 60.0%
GAGCCTATTGTACCCAGCCG+AGG + chr5_1:20421939-20421958 Msa0722910:intron 60.0%
GGTCACCTTGGCACAACCCT+CGG - chr5_1:20421959-20421978 None:intergenic 60.0%
GTTGTGCAGGGCCAATGTGG+TGG + chr5_1:20422127-20422146 Msa0722910:intron 60.0%
! TATGAGTGGGGAGGCGCAAG+AGG + chr5_1:20422182-20422201 Msa0722910:intron 60.0%
CCTTGGCACAACCCTCGGCT+GGG - chr5_1:20421954-20421973 None:intergenic 65.0%
ACCTTGGCACAACCCTCGGC+TGG - chr5_1:20421955-20421974 None:intergenic 65.0%
AGTAAGTCGCGGCGCACCAG+TGG + chr5_1:20422070-20422089 Msa0722910:intron 65.0%
GATGTGAGTGGCTCCGCCCC+TGG - chr5_1:20420727-20420746 None:intergenic 70.0%
CCCAGCCGAGGGTTGTGCCA+AGG + chr5_1:20421951-20421970 Msa0722910:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 20419481 20425049 20419481 ID=Msa0722910;Name=Msa0722910
chr5_1 mRNA 20419481 20425049 20419481 ID=Msa0722910-mRNA-1;Parent=Msa0722910;Name=Msa0722910-mRNA-1;_AED=0.39;_eAED=0.39;_QI=136|0.75|1|1|1|1|5|206|296
chr5_1 exon 20419481 20419861 20419481 ID=Msa0722910-mRNA-1:exon:7775;Parent=Msa0722910-mRNA-1
chr5_1 exon 20419951 20420064 20419951 ID=Msa0722910-mRNA-1:exon:7776;Parent=Msa0722910-mRNA-1
chr5_1 exon 20423258 20423498 20423258 ID=Msa0722910-mRNA-1:exon:7777;Parent=Msa0722910-mRNA-1
chr5_1 exon 20424447 20424598 20424447 ID=Msa0722910-mRNA-1:exon:7778;Parent=Msa0722910-mRNA-1
chr5_1 exon 20424705 20425049 20424705 ID=Msa0722910-mRNA-1:exon:7779;Parent=Msa0722910-mRNA-1
chr5_1 five_prime_UTR 20419481 20419616 20419481 ID=Msa0722910-mRNA-1:five_prime_utr;Parent=Msa0722910-mRNA-1
chr5_1 CDS 20419617 20419861 20419617 ID=Msa0722910-mRNA-1:cds;Parent=Msa0722910-mRNA-1
chr5_1 CDS 20419951 20420064 20419951 ID=Msa0722910-mRNA-1:cds;Parent=Msa0722910-mRNA-1
chr5_1 CDS 20423258 20423498 20423258 ID=Msa0722910-mRNA-1:cds;Parent=Msa0722910-mRNA-1
chr5_1 CDS 20424447 20424598 20424447 ID=Msa0722910-mRNA-1:cds;Parent=Msa0722910-mRNA-1
chr5_1 CDS 20424705 20424843 20424705 ID=Msa0722910-mRNA-1:cds;Parent=Msa0722910-mRNA-1
chr5_1 three_prime_UTR 20424844 20425049 20424844 ID=Msa0722910-mRNA-1:three_prime_utr;Parent=Msa0722910-mRNA-1
Gene Sequence

>Msa0722910

ATGGCGAGTGGAGGAGCAAGTGTAACAACAACTATGATTGCAGCTCAAATTGTTGAAGTGGGTGGTGAAACTCTAATGAAAGCAGCCACAAAAGATGGAATGAGTATTTTTATTTTCATTGTTTACAAAAACCTTTTGGCTCTATGTTTTCTTCTACCATCCACTCTCTTCCACCATAGAAAAAGAGCTCCTCCTCCAATTTCAACATCAATTTTCTGCAGATTACTTCTTCTTGGTTGCCTCAGAACTGCAACTCATATGTTAATGACTTCTGGAATTAAATTCAGTTCTCCCATGTTGGCTTCAGCTATTGTTAATCTTGTCCCTCCTTTTACCTTCATACTTGCTATAATTTCAAGGATGGAAGTTCTAAATATGAAAAAGCATAGCAGCCAGGCAAAAGTTATTGGCACAGTGGTCTCTATTGCAGGGGCATTAGTTGTGACATTTTATAAAGGGATACCATTGATTAATGATGCCATTAAAAATATAGAAATGGGAGCAAGTGGAATTTTCCTTTTAGGGAAATCAGATTGGATAATTGGTGCTTTTCTTCTTGCACTTAGTAGTTTTTGTCTTTCTCTTTTGTTTATTGTCCAGGCAACTTTTGTGGAATCAGTGAAGAATGTTATACTCACATGGGCATGTCGTAAGAAAGGACCAATATATGTAGCTATGTTCAAACCTTTAAGAGTGGTCATTGCACTTAGCATGGGGGTAATATTTTTGGGAGACAATCTTTATCTTGGAAGCATTATTGGAGCTGCTATCATAGTTATTGGATTTTATGCTGTGATATGGGCACAAGCTCAAGAGGAACACACAACAAGTGAAAACTTGTTGTCATCTTCTTCAGCCCCTCTATTGTCAAACAAAAGCATGGATATATAG
Protein sequence

>Msa0722910

MASGGASVTTTMIAAQIVEVGGETLMKAATKDGMSIFIFIVYKNLLALCFLLPSTLFHHRKRAPPPISTSIFCRLLLLGCLRTATHMLMTSGIKFSSPMLASAIVNLVPPFTFILAIISRMEVLNMKKHSSQAKVIGTVVSIAGALVVTFYKGIPLINDAIKNIEMGASGIFLLGKSDWIIGAFLLALSSFCLSLLFIVQATFVESVKNVILTWACRKKGPIYVAMFKPLRVVIALSMGVIFLGDNLYLGSIIGAAIIVIGFYAVIWAQAQEEHTTSENLLSSSSAPLLSNKSMDI*