AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186950 MtrunA17_Chr8g0353791 99.468 188 1 0 1 188 1 188 6.05e-142 392
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186950 AT3G12300.1 87.895 190 23 0 1 190 1 190 2.64e-131 366

Find 53 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTTGAGATTCAAGTTT+TGG 0.209840 8_1:+26130868 Msa1186950:CDS
ATTAGTCCCATATGCTTTCT+TGG 0.233780 8_1:-26131292 None:intergenic
TCTAATGTACTGGAAATAAT+TGG 0.268445 8_1:+26130737 Msa1186950:CDS
ATACCCAAGGCTGTATAATA+TGG 0.289391 8_1:-26129182 None:intergenic
TGGTATAAAACTTCCATTCT+TGG 0.289803 8_1:+26130814 Msa1186950:CDS
CATCTTGTGGTCGCTTAATA+TGG 0.311001 8_1:-26130703 None:intergenic
GGAGCAAACCTTTGCAGATA+TGG 0.317310 8_1:+26129306 Msa1186950:intron
TAAAGTCAGCCAGGTTAAAC+TGG 0.353864 8_1:-26131269 None:intergenic
TTTCCATATTATACAGCCTT+GGG 0.401172 8_1:+26129179 Msa1186950:CDS
CTCCTCTCGTCTCGTCTCTC+TGG 0.408763 8_1:+26127982 Msa1186950:five_prime_UTR
AAAGAATCAGCACTTAGTTT+AGG 0.410331 8_1:-26127953 None:intergenic
GACTTTACCAAGAAAGCATA+TGG 0.429193 8_1:+26131285 Msa1186950:CDS
TTCACAATCATAACCAAGAA+TGG 0.450408 8_1:-26130827 None:intergenic
AGTGTGGCAGCTGGGTCAGC+CGG 0.451970 8_1:-26130791 None:intergenic
AACTTACGATGATGAGCGTT+GGG 0.454005 8_1:-26128022 None:intergenic
CTTTCCATATTATACAGCCT+TGG 0.463889 8_1:+26129178 Msa1186950:CDS
TTTATACCAAGTGTGGCAGC+TGG 0.471135 8_1:-26130800 None:intergenic
CAAGTTGTACCTTCCAATGC+AGG 0.471690 8_1:+26131416 Msa1186950:CDS
TTCAAGAACACATTCCAGTC+TGG 0.472331 8_1:+26129151 Msa1186950:CDS
TTGCACTATGCCACTGAGAA+TGG 0.489210 8_1:+26131227 Msa1186950:CDS
AGACATACAATCTAATGTAC+TGG 0.495892 8_1:+26130727 Msa1186950:CDS
GATTGTATGTCTTCATCTTG+TGG 0.496368 8_1:-26130716 None:intergenic
CTTTCTTGGTAAAGTCAGCC+AGG 0.501342 8_1:-26131278 None:intergenic
ATTAACCTTAATTAGAGTGC+AGG 0.503861 8_1:+26131940 Msa1186950:intron
GCTGACCCAGCTGCCACACT+TGG 0.511732 8_1:+26130794 Msa1186950:CDS
GAGCAAACCTTTGCAGATAT+GGG 0.519182 8_1:+26129307 Msa1186950:CDS
TTCTCAAGCGACAGTTTGCA+TGG 0.520738 8_1:-26131341 None:intergenic
GTGTGGCAGCTGGGTCAGCC+GGG 0.525412 8_1:-26130790 None:intergenic
CAGACATCTCATACCTGCAT+TGG 0.527544 8_1:-26131429 None:intergenic
GGAAGGTACAACTTGAACTC+TGG 0.537228 8_1:-26131408 None:intergenic
AAACTTACGATGATGAGCGT+TGG 0.540100 8_1:-26128023 None:intergenic
CTTCTCTGATCGTCTCTACT+CGG 0.546100 8_1:+26131371 Msa1186950:CDS
GTCCACATACATTACGTGCC+CGG 0.551642 8_1:+26130772 Msa1186950:CDS
TATGCCACTGAGAATGGATG+AGG 0.552706 8_1:+26131233 Msa1186950:CDS
TCTTTGTCCCATATCTGCAA+AGG 0.557834 8_1:-26129314 None:intergenic
TGATCGTCTCTACTCGGAAG+AGG 0.559398 8_1:+26131377 Msa1186950:CDS
CATCTCATACCTGCATTGGA+AGG 0.576069 8_1:-26131425 None:intergenic
ATGCAAACTGTCGCTTGAGA+AGG 0.579025 8_1:+26131343 Msa1186950:CDS
AGGTACAACTTGAACTCTGG+TGG 0.579778 8_1:-26131405 None:intergenic
GAATCAAATCCAGTTTAACC+TGG 0.582198 8_1:+26131260 Msa1186950:CDS
AGTGGCATAGTGCAAATGTA+CGG 0.583812 8_1:-26131219 None:intergenic
CACTGAGAATGGATGAGGGT+TGG 0.589041 8_1:+26131238 Msa1186950:CDS
GAGAGACGAGACGAGAGGAG+AGG 0.594420 8_1:-26127979 None:intergenic
TTGCAGATATGGGACAAAGA+AGG 0.596515 8_1:+26129317 Msa1186950:CDS
ATATGGAAAGAAATCCAGAC+TGG 0.597297 8_1:-26129165 None:intergenic
ACTTTACCAAGAAAGCATAT+GGG 0.601556 8_1:+26131286 Msa1186950:CDS
TTATACCAAGTGTGGCAGCT+GGG 0.613588 8_1:-26130799 None:intergenic
GGTACAACTTGAACTCTGGT+GGG 0.629720 8_1:-26131404 None:intergenic
CGCCAGAGAGACGAGACGAG+AGG 0.645004 8_1:-26127984 None:intergenic
AGCATATGGGACTAATTATG+CGG 0.653286 8_1:+26131299 Msa1186950:CDS
AGCGTTGGGAAGAACAGCAA+CGG 0.665924 8_1:-26128008 None:intergenic
CAACCCTCATCCATTCTCAG+TGG 0.706213 8_1:-26131237 None:intergenic
ATGCCACTGAGAATGGATGA+GGG 0.727443 8_1:+26131234 Msa1186950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAAATAATTTTTTA+AGG + chr8_1:26134064-26134083 Msa1186950:intron 0.0%
!!! ATTTTTAAATAATTTTTTAA+GGG + chr8_1:26134065-26134084 Msa1186950:intron 0.0%
!!! TCAATTTTTTTTATTATTGT+AGG + chr8_1:26129285-26129304 Msa1186950:intron 10.0%
!!! TTTTATTATTTTTATGTCAT+AGG + chr8_1:26131179-26131198 Msa1186950:intron 10.0%
!!! CATTTTTTTTTTAGTTAAAA+AGG - chr8_1:26131838-26131857 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG + chr8_1:26132596-26132615 Msa1186950:intron 10.0%
!!! GTTTTTTCATATTTATAATA+GGG + chr8_1:26132619-26132638 Msa1186950:intron 10.0%
!!! AACAAAAAAATAACATGTTT+TGG - chr8_1:26129078-26129097 None:intergenic 15.0%
!! TAATCAAAGTAAAATGATTT+CGG - chr8_1:26129423-26129442 None:intergenic 15.0%
!!! TTAAATTGAACCTAATATTT+TGG + chr8_1:26129936-26129955 Msa1186950:intron 15.0%
!! AAAAAAAAAAAAATCGTTCA+GGG - chr8_1:26132070-26132089 None:intergenic 15.0%
!! AAAAAAAAAAAAAATCGTTC+AGG - chr8_1:26132071-26132090 None:intergenic 15.0%
!!! GTATAAATTTTACTTTTCAA+GGG - chr8_1:26132317-26132336 None:intergenic 15.0%
!!! AGTATAAATTTTACTTTTCA+AGG - chr8_1:26132318-26132337 None:intergenic 15.0%
!! AGGTCATATTTAATTATTAA+GGG - chr8_1:26132377-26132396 None:intergenic 15.0%
!! TAGGTCATATTTAATTATTA+AGG - chr8_1:26132378-26132397 None:intergenic 15.0%
!!! GGTTTTTTCATATTTATAAT+AGG + chr8_1:26132618-26132637 Msa1186950:intron 15.0%
!!! TCTAATATATTTTGAAAAAG+AGG + chr8_1:26132880-26132899 Msa1186950:intron 15.0%
!!! CTAATATATTTTGAAAAAGA+GGG + chr8_1:26132881-26132900 Msa1186950:intron 15.0%
!!! TAATATATTTTGAAAAAGAG+GGG + chr8_1:26132882-26132901 Msa1186950:intron 15.0%
!!! ATGTATATTTTAACATAAGA+TGG + chr8_1:26132911-26132930 Msa1186950:intron 15.0%
!!! TGTATATTTTAACATAAGAT+GGG + chr8_1:26132912-26132931 Msa1186950:intron 15.0%
!! TAAGCATTAAACAAATTATT+GGG - chr8_1:26133448-26133467 None:intergenic 15.0%
!! ATAAGCATTAAACAAATTAT+TGG - chr8_1:26133449-26133468 None:intergenic 15.0%
!! TGTTTATATGATCAAATATT+AGG - chr8_1:26133510-26133529 None:intergenic 15.0%
!! AAAACTAGTTATGACAATTA+GGG - chr8_1:26128110-26128129 None:intergenic 20.0%
!! AAACCAATAATCACAATTTA+GGG - chr8_1:26128606-26128625 None:intergenic 20.0%
!! AAAACCAATAATCACAATTT+AGG - chr8_1:26128607-26128626 None:intergenic 20.0%
!!! GATTATTGGTTTTGTATTAA+TGG + chr8_1:26128614-26128633 Msa1186950:intron 20.0%
!! ATTTCAACAACATAACATAA+TGG - chr8_1:26128724-26128743 None:intergenic 20.0%
!! AAAGTTCCATTAATGAATTA+TGG + chr8_1:26128999-26129018 Msa1186950:intron 20.0%
!! AAGAAACCATAATTCATTAA+TGG - chr8_1:26129008-26129027 None:intergenic 20.0%
!!! TTATGGTTTCTTTTTGTATT+CGG + chr8_1:26129016-26129035 Msa1186950:intron 20.0%
!! ACTTAAGTTAATTGCATAAA+GGG - chr8_1:26129660-26129679 None:intergenic 20.0%
!! TACTTAAGTTAATTGCATAA+AGG - chr8_1:26129661-26129680 None:intergenic 20.0%
!! ATACTAAATGGAAATTTATG+TGG + chr8_1:26129778-26129797 Msa1186950:intron 20.0%
!! ATATTAGGTTCAATTTAATC+CGG - chr8_1:26129934-26129953 None:intergenic 20.0%
!!! ACCTAATATTTTGGTTTAAA+AGG + chr8_1:26129945-26129964 Msa1186950:intron 20.0%
!!! CCTAATATTTTGGTTTAAAA+GGG + chr8_1:26129946-26129965 Msa1186950:intron 20.0%
!! CTTTCTTCCATTTAATTATA+TGG + chr8_1:26131022-26131041 Msa1186950:intron 20.0%
!! AAGTTCTCCATATAATTAAA+TGG - chr8_1:26131032-26131051 None:intergenic 20.0%
!! AGAAATAATGAAAATGTCAT+TGG + chr8_1:26131529-26131548 Msa1186950:intron 20.0%
!!! ATTTTGATATCATTGGTATT+TGG - chr8_1:26131978-26131997 None:intergenic 20.0%
!!! GAATAGAATTTTGATATCAT+TGG - chr8_1:26131985-26132004 None:intergenic 20.0%
!! ATATCAAAATTCTATTCCTT+AGG + chr8_1:26131988-26132007 Msa1186950:intron 20.0%
!! AATATTGAAAATATGAGTGA+CGG - chr8_1:26132157-26132176 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr8_1:26132287-26132306 None:intergenic 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr8_1:26132288-26132307 None:intergenic 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - chr8_1:26132289-26132308 None:intergenic 20.0%
!! ATATTTAATTATTAAGGGAG+GGG - chr8_1:26132372-26132391 None:intergenic 20.0%
!! CATATTTAATTATTAAGGGA+GGG - chr8_1:26132373-26132392 None:intergenic 20.0%
!! TCATATTTAATTATTAAGGG+AGG - chr8_1:26132374-26132393 None:intergenic 20.0%
!! GTTAAAATAGATTAAAGTGT+AGG - chr8_1:26132397-26132416 None:intergenic 20.0%
!! AGTAATATTCATTATTCTTG+CGG - chr8_1:26133283-26133302 None:intergenic 20.0%
!! AAAGAAAACAAATTCATTAC+TGG - chr8_1:26133421-26133440 None:intergenic 20.0%
!!! ACTTGTTACAAAATAAACAT+AGG - chr8_1:26133547-26133566 None:intergenic 20.0%
!!! ATGTTTATTTTGTAACAAGT+TGG + chr8_1:26133547-26133566 Msa1186950:intron 20.0%
!! ATATATAGCATGAATATGTA+GGG - chr8_1:26133765-26133784 None:intergenic 20.0%
!! TATATATAGCATGAATATGT+AGG - chr8_1:26133766-26133785 None:intergenic 20.0%
! CAAAACTAGTTATGACAATT+AGG - chr8_1:26128111-26128130 None:intergenic 25.0%
! TGCTTGTTTATGATTTAAGA+AGG + chr8_1:26128258-26128277 Msa1186950:intron 25.0%
! GCTTGTTTATGATTTAAGAA+GGG + chr8_1:26128259-26128278 Msa1186950:intron 25.0%
!!! CTTGTTTATTTTTCGATGTA+TGG + chr8_1:26128327-26128346 Msa1186950:intron 25.0%
!! ATGATTTCTCCTAGAATTTT+AGG + chr8_1:26128352-26128371 Msa1186950:intron 25.0%
!! TGATTTCTCCTAGAATTTTA+GGG + chr8_1:26128353-26128372 Msa1186950:intron 25.0%
! AATCCCTAAATTGTGATTAT+TGG + chr8_1:26128600-26128619 Msa1186950:intron 25.0%
!!! TATTGGTTTTGTATTAATGG+AGG + chr8_1:26128617-26128636 Msa1186950:intron 25.0%
!!! ATTGGTTTTGTATTAATGGA+GGG + chr8_1:26128618-26128637 Msa1186950:intron 25.0%
! TCTTTAGATGTACTATATGA+TGG + chr8_1:26128967-26128986 Msa1186950:intron 25.0%
!!! TCATATGTTTGTTGTGATTA+AGG + chr8_1:26129239-26129258 Msa1186950:intron 25.0%
! TACTGAAACAGTAATATAGA+TGG - chr8_1:26129721-26129740 None:intergenic 25.0%
! AGTTGGAATAAAACTTATAG+AGG + chr8_1:26129850-26129869 Msa1186950:intron 25.0%
!! CCCTTTTAAACCAAAATATT+AGG - chr8_1:26129949-26129968 None:intergenic 25.0%
! AAGAAAGACAAGAAAACTTA+TGG + chr8_1:26129975-26129994 Msa1186950:intron 25.0%
!! TTTGAAAAGTTAGTTCTTGA+TGG + chr8_1:26130034-26130053 Msa1186950:intron 25.0%
! CTACTAGAAAGTCAATTAAA+TGG - chr8_1:26130081-26130100 None:intergenic 25.0%
!! CATTTAATTGACTTTCTAGT+AGG + chr8_1:26130079-26130098 Msa1186950:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr8_1:26130434-26130453 None:intergenic 25.0%
! CAAAAGAATAAACCAGTTAA+TGG - chr8_1:26130536-26130555 None:intergenic 25.0%
!!! TATTCTTTTGTTTCGTTTCT+TGG + chr8_1:26130546-26130565 Msa1186950:intron 25.0%
!! TTAAACTTACGATTTTGTCT+TGG + chr8_1:26130655-26130674 Msa1186950:intron 25.0%
!! TAAACTTACGATTTTGTCTT+GGG + chr8_1:26130656-26130675 Msa1186950:intron 25.0%
! TCTAATGTACTGGAAATAAT+TGG + chr8_1:26130737-26130756 Msa1186950:CDS 25.0%
! AAATTAAACATCTGCAAGAT+TGG - chr8_1:26130978-26130997 None:intergenic 25.0%
! AATAATGAAAATGTCATTGG+AGG + chr8_1:26131532-26131551 Msa1186950:intron 25.0%
!!! AACTTTGTTTTGATTGTTTG+CGG - chr8_1:26132215-26132234 None:intergenic 25.0%
! TGTAATTCAAGCATTTCATA+GGG - chr8_1:26132258-26132277 None:intergenic 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG - chr8_1:26132313-26132332 None:intergenic 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG - chr8_1:26132314-26132333 None:intergenic 25.0%
! TATTTAATTATTAAGGGAGG+GGG - chr8_1:26132371-26132390 None:intergenic 25.0%
! TTATGAAAGTCGATAAAGAA+TGG - chr8_1:26132571-26132590 None:intergenic 25.0%
! TTTGAAGACAAATAGTATTG+TGG - chr8_1:26132726-26132745 None:intergenic 25.0%
!!! CGTAGATTTTAACATAAGAA+TGG + chr8_1:26132809-26132828 Msa1186950:intron 25.0%
!!! ATTTTAACATAAGAATGGAG+TGG + chr8_1:26132814-26132833 Msa1186950:intron 25.0%
!! TGTAATTCAAGTTTCTCTTA+AGG + chr8_1:26132839-26132858 Msa1186950:intron 25.0%
!! GTAATTCAAGTTTCTCTTAA+GGG + chr8_1:26132840-26132859 Msa1186950:intron 25.0%
!!! ATATTTTAACATAAGATGGG+AGG + chr8_1:26132915-26132934 Msa1186950:intron 25.0%
! AATTTACTCAACAAAGTTTG+AGG + chr8_1:26132976-26132995 Msa1186950:intron 25.0%
! TATTCTTGAGCTATGTAATT+GGG - chr8_1:26133320-26133339 None:intergenic 25.0%
! TTATTCTTGAGCTATGTAAT+TGG - chr8_1:26133321-26133340 None:intergenic 25.0%
! TATATAGCATGAATATGTAG+GGG - chr8_1:26133764-26133783 None:intergenic 25.0%
! GACTAATATCATAATATGTG+AGG - chr8_1:26133830-26133849 None:intergenic 25.0%
! TAGTCTTTACTGAATTGTTA+AGG + chr8_1:26133845-26133864 Msa1186950:intron 25.0%
! AGTCTTTACTGAATTGTTAA+GGG + chr8_1:26133846-26133865 Msa1186950:intron 25.0%
! ATACTATCATCTCATATTAG+AGG + chr8_1:26133923-26133942 Msa1186950:intron 25.0%
! TACTATCATCTCATATTAGA+GGG + chr8_1:26133924-26133943 Msa1186950:intron 25.0%
!! TCAATGTTTTCTGATAGATA+AGG + chr8_1:26133965-26133984 Msa1186950:intron 25.0%
AAAGAATCAGCACTTAGTTT+AGG - chr8_1:26127956-26127975 None:intergenic 30.0%
AGCAATGCCTACTTAATAAA+CGG - chr8_1:26128242-26128261 None:intergenic 30.0%
! GATTTCTCCTAGAATTTTAG+GGG + chr8_1:26128354-26128373 Msa1186950:intron 30.0%
AAATAGACCCCTAAAATTCT+AGG - chr8_1:26128364-26128383 None:intergenic 30.0%
AAAAACAGAAACACAACGAT+GGG - chr8_1:26128529-26128548 None:intergenic 30.0%
AAAAAACAGAAACACAACGA+TGG - chr8_1:26128530-26128549 None:intergenic 30.0%
AATGGCACTACAGAATTTAA+TGG - chr8_1:26128706-26128725 None:intergenic 30.0%
TCAAAAGAGAAGTTATATCG+TGG - chr8_1:26128838-26128857 None:intergenic 30.0%
! CTTCTCTTTTGATAAAACTC+TGG + chr8_1:26128846-26128865 Msa1186950:intron 30.0%
AATAGTGCGATAAAAGAACT+TGG + chr8_1:26128870-26128889 Msa1186950:intron 30.0%
AAAGAATAGTGTGGCAAAAT+TGG + chr8_1:26128907-26128926 Msa1186950:intron 30.0%
AAGAATAGTGTGGCAAAATT+GGG + chr8_1:26128908-26128927 Msa1186950:intron 30.0%
!!! GTTTTGGAAATTTAGTAGTG+AGG - chr8_1:26129062-26129081 None:intergenic 30.0%
! ACATTTTCTGCAATGAACAA+AGG - chr8_1:26129132-26129151 None:intergenic 30.0%
TTTCCATATTATACAGCCTT+GGG + chr8_1:26129179-26129198 Msa1186950:CDS 30.0%
TTGGTGTAGTTCATACTAAA+TGG + chr8_1:26129766-26129785 Msa1186950:intron 30.0%
TGGAAATTTATGTGGATGAA+TGG + chr8_1:26129786-26129805 Msa1186950:intron 30.0%
GGAAAAGAGCAACTTATATT+AGG + chr8_1:26129807-26129826 Msa1186950:intron 30.0%
AGAGCAACTTATATTAGGAA+TGG + chr8_1:26129812-26129831 Msa1186950:intron 30.0%
GGATACATTTATGAGAAAGT+TGG + chr8_1:26129833-26129852 Msa1186950:intron 30.0%
!! GAAACTTGTTATATGTCATG+TGG + chr8_1:26129884-26129903 Msa1186950:intron 30.0%
ACTCCAATGACAAAATAAAC+CGG + chr8_1:26129912-26129931 Msa1186950:intron 30.0%
!!! AATCCGGTTTATTTTGTCAT+TGG - chr8_1:26129918-26129937 None:intergenic 30.0%
TCACAATGAGTTATTCTTAG+TGG - chr8_1:26130006-26130025 None:intergenic 30.0%
! AATTGACTTTCTAGTAGGAT+AGG + chr8_1:26130084-26130103 Msa1186950:intron 30.0%
AAAGAAATATCCTAGAGACA+AGG - chr8_1:26130162-26130181 None:intergenic 30.0%
GACTACATTAGAGAAATGAT+AGG + chr8_1:26130230-26130249 Msa1186950:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr8_1:26130309-26130328 None:intergenic 30.0%
!! AGTTGGTAGAAAATAGACAT+TGG + chr8_1:26130319-26130338 Msa1186950:intron 30.0%
CTTTCTAATGGTTTCTCTAA+TGG - chr8_1:26130387-26130406 None:intergenic 30.0%
CATTAGAGAAACCATTAGAA+AGG + chr8_1:26130385-26130404 Msa1186950:intron 30.0%
!! AACCATTAGAAAGGTTTTAG+AGG + chr8_1:26130394-26130413 Msa1186950:intron 30.0%
TTTGATCTGATTCCATTAAC+TGG + chr8_1:26130521-26130540 Msa1186950:intron 30.0%
! AAACTTACGATTTTGTCTTG+GGG + chr8_1:26130657-26130676 Msa1186950:intron 30.0%
! ACTCTTTTTATAGTTGTGGA+TGG + chr8_1:26130680-26130699 Msa1186950:intron 30.0%
AGACATACAATCTAATGTAC+TGG + chr8_1:26130727-26130746 Msa1186950:CDS 30.0%
TGGTATAAAACTTCCATTCT+TGG + chr8_1:26130814-26130833 Msa1186950:CDS 30.0%
TTCACAATCATAACCAAGAA+TGG - chr8_1:26130830-26130849 None:intergenic 30.0%
!! CACATTTGAGATTCAAGTTT+TGG + chr8_1:26130868-26130887 Msa1186950:CDS 30.0%
! ACTTTACCAAGAAAGCATAT+GGG + chr8_1:26131286-26131305 Msa1186950:CDS 30.0%
!!! AGAATACAGTTTTTAGTGCA+GGG - chr8_1:26131612-26131631 None:intergenic 30.0%
TTATACAACTGCTCTATTGT+AGG + chr8_1:26131654-26131673 Msa1186950:intron 30.0%
TATACAACTGCTCTATTGTA+GGG + chr8_1:26131655-26131674 Msa1186950:intron 30.0%
TATTGTCTTACCAAAGAAAG+AGG + chr8_1:26131733-26131752 Msa1186950:intron 30.0%
ATTGTCTTACCAAAGAAAGA+GGG + chr8_1:26131734-26131753 Msa1186950:intron 30.0%
CATGTTACAACACTATAATC+AGG - chr8_1:26131798-26131817 None:intergenic 30.0%
! TTCTATTCCTTAGGAAGTTT+TGG + chr8_1:26131997-26132016 Msa1186950:intron 30.0%
AAGATATCCAAAACTTCCTA+AGG - chr8_1:26132007-26132026 None:intergenic 30.0%
!!! ACTTTGTTTTGATTGTTTGC+GGG - chr8_1:26132214-26132233 None:intergenic 30.0%
GTAATTCAAGCATTTCATAG+GGG - chr8_1:26132257-26132276 None:intergenic 30.0%
GTGTAATTCAAGCATTTCAT+AGG - chr8_1:26132259-26132278 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG - chr8_1:26132283-26132302 None:intergenic 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG - chr8_1:26132284-26132303 None:intergenic 30.0%
!! TATATTTTGAAAAAGAGGGG+AGG + chr8_1:26132885-26132904 Msa1186950:intron 30.0%
!! ATATTTTGAAAAAGAGGGGA+GGG + chr8_1:26132886-26132905 Msa1186950:intron 30.0%
TGTAATTCAAGCATCTTTGT+GGG + chr8_1:26132942-26132961 Msa1186950:intron 30.0%
CAAATTATACATTCCGTGTT+GGG - chr8_1:26133035-26133054 None:intergenic 30.0%
! TGCTCTACTCTATCTTATTT+AGG + chr8_1:26133084-26133103 Msa1186950:intron 30.0%
! GCTCTACTCTATCTTATTTA+GGG + chr8_1:26133085-26133104 Msa1186950:intron 30.0%
! CTCTACTCTATCTTATTTAG+GGG + chr8_1:26133086-26133105 Msa1186950:intron 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr8_1:26133278-26133297 None:intergenic 30.0%
ATTCTTGAGCTATGTAATTG+GGG - chr8_1:26133319-26133338 None:intergenic 30.0%
! AGCTCAAGAATAATCTCTTT+TGG + chr8_1:26133328-26133347 Msa1186950:intron 30.0%
TGAATTATAATCGAACCTGA+TGG - chr8_1:26133375-26133394 None:intergenic 30.0%
TGGAAATGAATTGAAAGAGA+TGG - chr8_1:26133401-26133420 None:intergenic 30.0%
! TGAGACTTTTTACATATGGA+TGG - chr8_1:26133885-26133904 None:intergenic 30.0%
! TGCTTGAGACTTTTTACATA+TGG - chr8_1:26133889-26133908 None:intergenic 30.0%
TATGTAAAAAGTCTCAAGCA+CGG + chr8_1:26133889-26133908 Msa1186950:intron 30.0%
AAATGTTCTGTAGCACATGT+TGG + chr8_1:26128151-26128170 Msa1186950:intron 35.0%
AGAATAGTGCTATAGCAGTA+TGG - chr8_1:26128197-26128216 None:intergenic 35.0%
CAATACGCCGTTTATTAAGT+AGG + chr8_1:26128232-26128251 Msa1186950:intron 35.0%
AACATGAGAAAAACAACCAC+AGG - chr8_1:26128296-26128315 None:intergenic 35.0%
CAGAGAAATACACAAAGAGA+GGG - chr8_1:26128504-26128523 None:intergenic 35.0%
ACAGAGAAATACACAAAGAG+AGG - chr8_1:26128505-26128524 None:intergenic 35.0%
CTACAGAATTTAATGGCACA+AGG - chr8_1:26128699-26128718 None:intergenic 35.0%
CACTATTACTATAAGCTGGA+TGG + chr8_1:26128785-26128804 Msa1186950:intron 35.0%
CTTGTCACTAAAGAATAGTG+TGG + chr8_1:26128898-26128917 Msa1186950:intron 35.0%
! GGTTTCTTTTTGTATTCGGT+TGG + chr8_1:26129020-26129039 Msa1186950:intron 35.0%
ATATGGAAAGAAATCCAGAC+TGG - chr8_1:26129168-26129187 None:intergenic 35.0%
CTTTCCATATTATACAGCCT+TGG + chr8_1:26129178-26129197 Msa1186950:CDS 35.0%
ATACCCAAGGCTGTATAATA+TGG - chr8_1:26129185-26129204 None:intergenic 35.0%
TTGTTAGCAGTGACATTAGA+TGG + chr8_1:26129351-26129370 Msa1186950:intron 35.0%
! GTTTAGTTGTGCTTCTGAAA+TGG + chr8_1:26129467-26129486 Msa1186950:intron 35.0%
AATATGTTGAAGAGTGACTG+AGG + chr8_1:26129552-26129571 Msa1186950:intron 35.0%
ATATGTTGAAGAGTGACTGA+GGG + chr8_1:26129553-26129572 Msa1186950:intron 35.0%
CAAAGCACAACATTTCTCAA+CGG - chr8_1:26129694-26129713 None:intergenic 35.0%
ATGGATCAACTGATGCAATA+GGG - chr8_1:26130062-26130081 None:intergenic 35.0%
AATGGATCAACTGATGCAAT+AGG - chr8_1:26130063-26130082 None:intergenic 35.0%
! GATACATTTTCCTTGTCTCT+AGG + chr8_1:26130149-26130168 Msa1186950:intron 35.0%
AGTTTGTGTGATATGTGTAC+TGG + chr8_1:26130196-26130215 Msa1186950:intron 35.0%
GTTTGTGTGATATGTGTACT+GGG + chr8_1:26130197-26130216 Msa1186950:intron 35.0%
TGATTCCATTAGAAAGAGAG+TGG + chr8_1:26130275-26130294 Msa1186950:intron 35.0%
GATTCCATTAGAAAGAGAGT+GGG + chr8_1:26130276-26130295 Msa1186950:intron 35.0%
ATTCCATTAGAAAGAGAGTG+GGG + chr8_1:26130277-26130296 Msa1186950:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr8_1:26130302-26130321 Msa1186950:intron 35.0%
TGGTAGAAAATAGACATTGG+TGG + chr8_1:26130322-26130341 Msa1186950:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + chr8_1:26130347-26130366 Msa1186950:intron 35.0%
GTTTCTCTAATGGCTTTCTT+AGG - chr8_1:26130377-26130396 None:intergenic 35.0%
!! GACCTCTAAAACCTTTCTAA+TGG - chr8_1:26130399-26130418 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr8_1:26130418-26130437 Msa1186950:intron 35.0%
GATTGTATGTCTTCATCTTG+TGG - chr8_1:26130719-26130738 None:intergenic 35.0%
!! TGGAAGTTTTATACCAAGTG+TGG - chr8_1:26130810-26130829 None:intergenic 35.0%
CCTATAAGACACACAAACAT+GGG - chr8_1:26130951-26130970 None:intergenic 35.0%
TCCTATAAGACACACAAACA+TGG - chr8_1:26130952-26130971 None:intergenic 35.0%
GAATCAAATCCAGTTTAACC+TGG + chr8_1:26131260-26131279 Msa1186950:CDS 35.0%
! GACTTTACCAAGAAAGCATA+TGG + chr8_1:26131285-26131304 Msa1186950:CDS 35.0%
ATTAGTCCCATATGCTTTCT+TGG - chr8_1:26131295-26131314 None:intergenic 35.0%
AGCATATGGGACTAATTATG+CGG + chr8_1:26131299-26131318 Msa1186950:CDS 35.0%
TTTCATCTCAATTGCATGTC+AGG + chr8_1:26131481-26131500 Msa1186950:intron 35.0%
TCTGCATGATGAACAATACA+AGG - chr8_1:26131512-26131531 None:intergenic 35.0%
ATGAAAATGTCATTGGAGGA+TGG + chr8_1:26131536-26131555 Msa1186950:intron 35.0%
!!! GAGAATACAGTTTTTAGTGC+AGG - chr8_1:26131613-26131632 None:intergenic 35.0%
ACATATCAACCCTCTTTCTT+TGG - chr8_1:26131746-26131765 None:intergenic 35.0%
TTTCTTGTCAGGTAAGTGAA+TGG - chr8_1:26131867-26131886 None:intergenic 35.0%
! TTGTGTCACTATTTCTTGTC+AGG - chr8_1:26131878-26131897 None:intergenic 35.0%
!!! ATTTTGAAGCTGTGAAGATC+TGG + chr8_1:26132034-26132053 Msa1186950:intron 35.0%
TGCAATTCAAGCATCTCAAA+GGG - chr8_1:26132347-26132366 None:intergenic 35.0%
TTGCAATTCAAGCATCTCAA+AGG - chr8_1:26132348-26132367 None:intergenic 35.0%
! ATTCAAGTTTCTCTTAAGGG+AGG + chr8_1:26132843-26132862 Msa1186950:intron 35.0%
! TTCAAGTTTCTCTTAAGGGA+GGG + chr8_1:26132844-26132863 Msa1186950:intron 35.0%
GTGTAATTCAAGCATCTTTG+TGG + chr8_1:26132941-26132960 Msa1186950:intron 35.0%
GTAATTCAAGCATCTTTGTG+GGG + chr8_1:26132943-26132962 Msa1186950:intron 35.0%
TCAACAAAGTTTGAGGAACA+TGG + chr8_1:26132983-26133002 Msa1186950:intron 35.0%
TATAACATGAACTGCCATTC+TGG + chr8_1:26133007-26133026 Msa1186950:intron 35.0%
GCAAATTATACATTCCGTGT+TGG - chr8_1:26133036-26133055 None:intergenic 35.0%
!! AATTTGCTGCTCTTTAGTTG+TGG + chr8_1:26133049-26133068 Msa1186950:intron 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr8_1:26133121-26133140 None:intergenic 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr8_1:26133130-26133149 None:intergenic 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr8_1:26133131-26133150 None:intergenic 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr8_1:26133273-26133292 None:intergenic 35.0%
! AGATAAAAAAGCATGCGGTT+TGG - chr8_1:26133688-26133707 None:intergenic 35.0%
TGGTATCAATGTCTCAACTA+GGG - chr8_1:26133794-26133813 None:intergenic 35.0%
TTGAGACATTGATACCACAA+GGG + chr8_1:26133797-26133816 Msa1186950:intron 35.0%
! TCATATTAGAGGGTATGACA+TGG + chr8_1:26133934-26133953 Msa1186950:intron 35.0%
AACTTACGATGATGAGCGTT+GGG - chr8_1:26128025-26128044 None:intergenic 40.0%
AAACTTACGATGATGAGCGT+TGG - chr8_1:26128026-26128045 None:intergenic 40.0%
AAAAACAACCACAGGCACAA+AGG - chr8_1:26128288-26128307 None:intergenic 40.0%
! GACTTATGATGGTGAGAAGA+GGG - chr8_1:26128476-26128495 None:intergenic 40.0%
! AGACTTATGATGGTGAGAAG+AGG - chr8_1:26128477-26128496 None:intergenic 40.0%
GAAATACACAAAGAGAGGGT+TGG - chr8_1:26128500-26128519 None:intergenic 40.0%
GCAGCACTATTACTATAAGC+TGG + chr8_1:26128781-26128800 Msa1186950:intron 40.0%
TTCAAGAACACATTCCAGTC+TGG + chr8_1:26129151-26129170 Msa1186950:CDS 40.0%
GAGCAAACCTTTGCAGATAT+GGG + chr8_1:26129307-26129326 Msa1186950:CDS 40.0%
TCTTTGTCCCATATCTGCAA+AGG - chr8_1:26129317-26129336 None:intergenic 40.0%
TTGCAGATATGGGACAAAGA+AGG + chr8_1:26129317-26129336 Msa1186950:CDS 40.0%
!! GTTGTGCTTCTGAAATGGTT+AGG + chr8_1:26129472-26129491 Msa1186950:intron 40.0%
TATGTGTTGTGCTGTCCATT+TGG + chr8_1:26129504-26129523 Msa1186950:intron 40.0%
CCTTTCATAACATGGCCAAA+TGG - chr8_1:26129522-26129541 None:intergenic 40.0%
CCATTTGGCCATGTTATGAA+AGG + chr8_1:26129519-26129538 Msa1186950:intron 40.0%
AGTGACTGAGGGATGAAATA+TGG + chr8_1:26129564-26129583 Msa1186950:intron 40.0%
CTCTTTCGCAACACAAATGA+GGG - chr8_1:26129598-26129617 None:intergenic 40.0%
TCTCTTTCGCAACACAAATG+AGG - chr8_1:26129599-26129618 None:intergenic 40.0%
TATGAACTACACCAAGAGCA+TGG - chr8_1:26129761-26129780 None:intergenic 40.0%
TTCCATTAGAAAGAGAGTGG+GGG + chr8_1:26130278-26130297 Msa1186950:intron 40.0%
GTGGAGAGTCAAGTTAAAAG+AGG + chr8_1:26130341-26130360 Msa1186950:intron 40.0%
!!! GGTTTTAGAGGTCAATGAGT+TGG + chr8_1:26130406-26130425 Msa1186950:intron 40.0%
! GGGGACTCTTTTTATAGTTG+TGG + chr8_1:26130676-26130695 Msa1186950:intron 40.0%
CATCTTGTGGTCGCTTAATA+TGG - chr8_1:26130706-26130725 None:intergenic 40.0%
CCCATGTTTGTGTGTCTTAT+AGG + chr8_1:26130948-26130967 Msa1186950:intron 40.0%
AGTGGCATAGTGCAAATGTA+CGG - chr8_1:26131222-26131241 None:intergenic 40.0%
TAAAGTCAGCCAGGTTAAAC+TGG - chr8_1:26131272-26131291 None:intergenic 40.0%
CATAACATTCAACCATCTCC+TGG - chr8_1:26131570-26131589 None:intergenic 40.0%
TGTTATGTGTAGTTGTGCGT+CGG + chr8_1:26131583-26131602 Msa1186950:intron 40.0%
GGAATCAGAAACATAGTCTC+TGG - chr8_1:26131777-26131796 None:intergenic 40.0%
TTCAAGCATTTCATAGGGGA+GGG - chr8_1:26132253-26132272 None:intergenic 40.0%
ATTCAAGCATTTCATAGGGG+AGG - chr8_1:26132254-26132273 None:intergenic 40.0%
GCAATTCAAGCATCTCAAAG+GGG - chr8_1:26132346-26132365 None:intergenic 40.0%
TCAAGTTTCTCTTAAGGGAG+GGG + chr8_1:26132845-26132864 Msa1186950:intron 40.0%
TGCTCTTTAGTTGTGGTGAA+AGG + chr8_1:26133056-26133075 Msa1186950:intron 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr8_1:26133126-26133145 None:intergenic 40.0%
!! GTTTGGATTGGTTTGGTTTG+CGG - chr8_1:26133143-26133162 None:intergenic 40.0%
!!! AATGCGGTTTTTTGCGGTTT+CGG - chr8_1:26133165-26133184 None:intergenic 40.0%
AAACCGCAAAAAACCGCATT+TGG + chr8_1:26133165-26133184 Msa1186950:intron 40.0%
!!! GAACCAAATGCGGTTTTTTG+CGG - chr8_1:26133171-26133190 None:intergenic 40.0%
GCAAAAAACCGCATTTGGTT+CGG + chr8_1:26133170-26133189 Msa1186950:intron 40.0%
GAATTCATCCGAACCAAATG+CGG - chr8_1:26133181-26133200 None:intergenic 40.0%
!! GCATTTGGTTCGGATGAATT+CGG + chr8_1:26133180-26133199 Msa1186950:intron 40.0%
TCATCCAAACCAAACCAATG+CGG - chr8_1:26133640-26133659 None:intergenic 40.0%
!! AAAAAGCATGCGGTTTGGTT+TGG - chr8_1:26133683-26133702 None:intergenic 40.0%
!!! TGCTTTTTTATCTCGCGGTT+TGG + chr8_1:26133695-26133714 Msa1186950:intron 40.0%
GGTATCAATGTCTCAACTAG+GGG - chr8_1:26133793-26133812 None:intergenic 40.0%
GTGGTATCAATGTCTCAACT+AGG - chr8_1:26133795-26133814 None:intergenic 40.0%
GTTGAGACATTGATACCACA+AGG + chr8_1:26133796-26133815 Msa1186950:intron 40.0%
GCGATTCACAGATAGAGAGA+GGG - chr8_1:26128081-26128100 None:intergenic 45.0%
TGCGATTCACAGATAGAGAG+AGG - chr8_1:26128082-26128101 None:intergenic 45.0%
! GCACATGTTGGAAGCTTGTT+CGG + chr8_1:26128163-26128182 Msa1186950:intron 45.0%
ATGCAACGGACAAAGCTGTT+TGG - chr8_1:26128439-26128458 None:intergenic 45.0%
TCTCAGAGCAACAGATGCAA+CGG - chr8_1:26128453-26128472 None:intergenic 45.0%
AGAGGGTTGGAGACTTATGA+TGG - chr8_1:26128487-26128506 None:intergenic 45.0%
! TCGAGAGCACAATGGGTTTA+GGG - chr8_1:26128581-26128600 None:intergenic 45.0%
! TTCGAGAGCACAATGGGTTT+AGG - chr8_1:26128582-26128601 None:intergenic 45.0%
! TAGGGATTCGAGAGCACAAT+GGG - chr8_1:26128588-26128607 None:intergenic 45.0%
! TTAGGGATTCGAGAGCACAA+TGG - chr8_1:26128589-26128608 None:intergenic 45.0%
! GTATTCGGTTGGTACGATGT+AGG + chr8_1:26129031-26129050 Msa1186950:intron 45.0%
ATACAGCCTTGGGTATGATG+TGG + chr8_1:26129189-26129208 Msa1186950:intron 45.0%
GGAGCAAACCTTTGCAGATA+TGG + chr8_1:26129306-26129325 Msa1186950:intron 45.0%
TTGGCCATGTTATGAAAGGC+TGG + chr8_1:26129523-26129542 Msa1186950:intron 45.0%
CACACCAGCCTTTCATAACA+TGG - chr8_1:26129530-26129549 None:intergenic 45.0%
GCACAACATTTCTCAACGGA+TGG - chr8_1:26129690-26129709 None:intergenic 45.0%
TCACAATACCACCATGCTCT+TGG + chr8_1:26129747-26129766 Msa1186950:intron 45.0%
! CTTTCTAGTAGGATAGGTCG+TGG + chr8_1:26130090-26130109 Msa1186950:intron 45.0%
GATAGGTCGTGGTTGTTTGA+AGG + chr8_1:26130101-26130120 Msa1186950:intron 45.0%
TACCCCCACTCTCTTTCTAA+TGG - chr8_1:26130283-26130302 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr8_1:26130487-26130506 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr8_1:26130488-26130507 None:intergenic 45.0%
TTATACCAAGTGTGGCAGCT+GGG - chr8_1:26130802-26130821 None:intergenic 45.0%
TTTATACCAAGTGTGGCAGC+TGG - chr8_1:26130803-26130822 None:intergenic 45.0%
! ACGTGCATCGACAGCAATTT+AGG - chr8_1:26131146-26131165 None:intergenic 45.0%
TTGCACTATGCCACTGAGAA+TGG + chr8_1:26131227-26131246 Msa1186950:CDS 45.0%
TATGCCACTGAGAATGGATG+AGG + chr8_1:26131233-26131252 Msa1186950:CDS 45.0%
ATGCCACTGAGAATGGATGA+GGG + chr8_1:26131234-26131253 Msa1186950:CDS 45.0%
CTTTCTTGGTAAAGTCAGCC+AGG - chr8_1:26131281-26131300 None:intergenic 45.0%
TTCTCAAGCGACAGTTTGCA+TGG - chr8_1:26131344-26131363 None:intergenic 45.0%
! ATGCAAACTGTCGCTTGAGA+AGG + chr8_1:26131343-26131362 Msa1186950:CDS 45.0%
CTTCTCTGATCGTCTCTACT+CGG + chr8_1:26131371-26131390 Msa1186950:CDS 45.0%
GGTACAACTTGAACTCTGGT+GGG - chr8_1:26131407-26131426 None:intergenic 45.0%
AGGTACAACTTGAACTCTGG+TGG - chr8_1:26131408-26131427 None:intergenic 45.0%
! GGAAGGTACAACTTGAACTC+TGG - chr8_1:26131411-26131430 None:intergenic 45.0%
CAAGTTGTACCTTCCAATGC+AGG + chr8_1:26131416-26131435 Msa1186950:CDS 45.0%
CATCTCATACCTGCATTGGA+AGG - chr8_1:26131428-26131447 None:intergenic 45.0%
CAGACATCTCATACCTGCAT+TGG - chr8_1:26131432-26131451 None:intergenic 45.0%
ATGGAATTGATGCCAGGAGA+TGG + chr8_1:26131555-26131574 Msa1186950:intron 45.0%
TCAAGCATTTCATAGGGGAG+GGG - chr8_1:26132252-26132271 None:intergenic 45.0%
TTCAAGCATCTCAAAGGGGA+GGG - chr8_1:26132342-26132361 None:intergenic 45.0%
ATTCAAGCATCTCAAAGGGG+AGG - chr8_1:26132343-26132362 None:intergenic 45.0%
!! GGTTTCGGTTTGGATTGGTT+TGG - chr8_1:26133150-26133169 None:intergenic 45.0%
!! TTTGCGGTTTCGGTTTGGAT+TGG - chr8_1:26133155-26133174 None:intergenic 45.0%
!!! GGTTTTTTGCGGTTTCGGTT+TGG - chr8_1:26133160-26133179 None:intergenic 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr8_1:26133263-26133282 None:intergenic 45.0%
!! TCTTGCGGTTTGGTTTGGTT+TGG - chr8_1:26133268-26133287 None:intergenic 45.0%
! TTTTCCATCGTTGCACCATC+AGG + chr8_1:26133357-26133376 Msa1186950:intron 45.0%
!! TTGGATTGGTTCGGTTTGTG+CGG - chr8_1:26133616-26133635 None:intergenic 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr8_1:26133625-26133644 None:intergenic 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr8_1:26133630-26133649 None:intergenic 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr8_1:26133628-26133647 Msa1186950:intron 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr8_1:26133635-26133654 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr8_1:26133633-26133652 Msa1186950:intron 45.0%
! CCGCGAGATAAAAAAGCATG+CGG - chr8_1:26133693-26133712 None:intergenic 45.0%
!!! CCGCATGCTTTTTTATCTCG+CGG + chr8_1:26133690-26133709 Msa1186950:intron 45.0%
!! TGAATATGTAGGGGTGTTCG+CGG - chr8_1:26133755-26133774 None:intergenic 45.0%
GACATTGATACCACAAGGGT+CGG + chr8_1:26133801-26133820 Msa1186950:intron 45.0%
ACATTGATACCACAAGGGTC+GGG + chr8_1:26133802-26133821 Msa1186950:intron 45.0%
!!! ACATATTTTAATTTTATTTT+GGG + chr8_1:26132597-26132616 Msa1186950:intron 5.0%
!! AAAATTTGATTATATTAAAA+TGG + chr8_1:26132698-26132717 Msa1186950:intron 5.0%
! AGCGTTGGGAAGAACAGCAA+CGG - chr8_1:26128011-26128030 None:intergenic 50.0%
AAGGGTTACCTTTGTGCCTG+TGG + chr8_1:26128277-26128296 Msa1186950:intron 50.0%
AGCCTTGGGTATGATGTGGT+TGG + chr8_1:26129193-26129212 Msa1186950:intron 50.0%
AGCCAACCACATCATACCCA+AGG - chr8_1:26129198-26129217 None:intergenic 50.0%
! GAACTACACCAAGAGCATGG+TGG - chr8_1:26129758-26129777 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr8_1:26130483-26130502 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr8_1:26130489-26130508 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr8_1:26130486-26130505 Msa1186950:intron 50.0%
GTCCACATACATTACGTGCC+CGG + chr8_1:26130772-26130791 Msa1186950:CDS 50.0%
CATGGGCAGACTTACACACT+TGG - chr8_1:26130934-26130953 None:intergenic 50.0%
CAACCCTCATCCATTCTCAG+TGG - chr8_1:26131240-26131259 None:intergenic 50.0%
CACTGAGAATGGATGAGGGT+TGG + chr8_1:26131238-26131257 Msa1186950:CDS 50.0%
TGATCGTCTCTACTCGGAAG+AGG + chr8_1:26131377-26131396 Msa1186950:CDS 50.0%
TGGAGGATGGAATTGATGCC+AGG + chr8_1:26131549-26131568 Msa1186950:intron 50.0%
GCTGTGAAGATCTGGTGAAC+TGG + chr8_1:26132042-26132061 Msa1186950:intron 50.0%
TCAAGCATCTCAAAGGGGAG+GGG - chr8_1:26132341-26132360 None:intergenic 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr8_1:26133623-26133642 Msa1186950:intron 50.0%
!! GCATGCGGTTTGGTTTGGTT+CGG - chr8_1:26133678-26133697 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr8_1:26130475-26130494 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr8_1:26130474-26130493 Msa1186950:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr8_1:26130475-26130494 Msa1186950:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr8_1:26130481-26130500 Msa1186950:intron 55.0%
AGCCGGGCACGTAATGTATG+TGG - chr8_1:26130777-26130796 None:intergenic 55.0%
!! TGCCATTCTGGCTCCCAACA+CGG + chr8_1:26133019-26133038 Msa1186950:intron 55.0%
TTCCGTGTTGGGAGCCAGAA+TGG - chr8_1:26133024-26133043 None:intergenic 55.0%
! GACTTTTGCACTGAACCGCG+CGG + chr8_1:26133205-26133224 Msa1186950:intron 55.0%
! CGAACCTGATGGTGCAACGA+TGG - chr8_1:26133364-26133383 None:intergenic 55.0%
GAGAGACGAGACGAGAGGAG+AGG - chr8_1:26127982-26128001 None:intergenic 60.0%
CTCCTCTCGTCTCGTCTCTC+TGG + chr8_1:26127982-26128001 Msa1186950:five_prime_UTR 60.0%
TGCGGAGACGCTACGAGTTC+AGG + chr8_1:26131317-26131336 Msa1186950:CDS 60.0%
TTGCACTGAACCGCGCGGTT+TGG + chr8_1:26133210-26133229 Msa1186950:intron 60.0%
!! CTGAACCGCGCGGTTTGGTT+CGG + chr8_1:26133215-26133234 Msa1186950:intron 60.0%
GCAAACCGAACCAAACCGCG+CGG - chr8_1:26133223-26133242 None:intergenic 60.0%
!! GCGCGGTTTGGTTCGGTTTG+CGG + chr8_1:26133222-26133241 Msa1186950:intron 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr8_1:26133740-26133759 None:intergenic 60.0%
!! ATGTAGGGGTGTTCGCGGTG+CGG - chr8_1:26133750-26133769 None:intergenic 60.0%
CGCCAGAGAGACGAGACGAG+AGG - chr8_1:26127987-26128006 None:intergenic 65.0%
AGTGTGGCAGCTGGGTCAGC+CGG - chr8_1:26130794-26130813 None:intergenic 65.0%
GCTGACCCAGCTGCCACACT+TGG + chr8_1:26130794-26130813 Msa1186950:CDS 65.0%
TGTGAGGCTCCCGACCCTTG+TGG - chr8_1:26133814-26133833 None:intergenic 65.0%
GTGTGGCAGCTGGGTCAGCC+GGG - chr8_1:26130793-26130812 None:intergenic 70.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr8_1:26133745-26133764 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 26127952 26134123 26127952 ID=Msa1186950;Name=Msa1186950
chr8_1 mRNA 26127952 26134123 26127952 ID=Msa1186950-mRNA-1;Parent=Msa1186950;Name=Msa1186950-mRNA-1;_AED=0.25;_eAED=0.25;_QI=89|0.66|0.71|0.71|0.83|0.85|7|0|192
chr8_1 exon 26127952 26128037 26127952 ID=Msa1186950-mRNA-1:exon:9252;Parent=Msa1186950-mRNA-1
chr8_1 exon 26129145 26129200 26129145 ID=Msa1186950-mRNA-1:exon:9253;Parent=Msa1186950-mRNA-1
chr8_1 exon 26129307 26129338 26129307 ID=Msa1186950-mRNA-1:exon:9254;Parent=Msa1186950-mRNA-1
chr8_1 exon 26130693 26130934 26130693 ID=Msa1186950-mRNA-1:exon:9255;Parent=Msa1186950-mRNA-1
chr8_1 exon 26131201 26131437 26131201 ID=Msa1186950-mRNA-1:exon:9256;Parent=Msa1186950-mRNA-1
chr8_1 exon 26131955 26131961 26131955 ID=Msa1186950-mRNA-1:exon:9257;Parent=Msa1186950-mRNA-1
chr8_1 exon 26134116 26134123 26134116 ID=Msa1186950-mRNA-1:exon:9258;Parent=Msa1186950-mRNA-1
chr8_1 five_prime_UTR 26127952 26128037 26127952 ID=Msa1186950-mRNA-1:five_prime_utr;Parent=Msa1186950-mRNA-1
chr8_1 five_prime_UTR 26129145 26129147 26129145 ID=Msa1186950-mRNA-1:five_prime_utr;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26129148 26129200 26129148 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26129307 26129338 26129307 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26130693 26130934 26130693 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26131201 26131437 26131201 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26131955 26131961 26131955 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
chr8_1 CDS 26134116 26134123 26134116 ID=Msa1186950-mRNA-1:cds;Parent=Msa1186950-mRNA-1
Gene Sequence

>Msa1186950

ATGTTCAAGAACACATTCCAGTCTGGATTTCTTTCCATATTATACAGCCTTGGGAGCAAACCTTTGCAGATATGGGACAAAGAAGTTGTGGATGGCCATATTAAGCGACCACAAGATGAAGACATACAATCTAATGTACTGGAAATAATTGGATCGAATATTCAGTCCACATACATTACGTGCCCGGCTGACCCAGCTGCCACACTTGGTATAAAACTTCCATTCTTGGTTATGATTGTGAAGAATCTAAAGAAGTACTTCACATTTGAGATTCAAGTTTTGGATGATAAGAATGTCAGACGACGATTTCGAGCTTCTAATTTCCAAGCTGTCACTAGAGTAAAGCCGTACATTTGCACTATGCCACTGAGAATGGATGAGGGTTGGAATCAAATCCAGTTTAACCTGGCTGACTTTACCAAGAAAGCATATGGGACTAATTATGCGGAGACGCTACGAGTTCAGGTCCATGCAAACTGTCGCTTGAGAAGGATATACTTCTCTGATCGTCTCTACTCGGAAGAGGAACTCCCACCAGAGTTCAAGTTGTACCTTCCAATGCAGAGTGCAGATATTTGA

Protein sequence

>Msa1186950

MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHIKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKKAYGTNYAETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQSADI*