Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941350 | sp|Q9M3B3|WSD4_ARATH | 27.403 | 489 | 298 | 11 | 1 | 439 | 9 | 490 | 1.54e-51 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941350 | A0A1S2Z801 | 85.106 | 470 | 42 | 4 | 1 | 442 | 1 | 470 | 0.0 | 810 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0941350 | 0.826217 | 3.061774e-54 | -8.615850e-47 |
| Msa0074240 | Msa0941350 | 0.806513 | 7.933164e-50 | -8.615850e-47 |
| Msa0112570 | Msa0941350 | 0.807819 | 4.195574e-50 | -8.615850e-47 |
| Msa0739730 | Msa0941350 | 0.804554 | 2.043057e-49 | -8.615850e-47 |
| Msa0769180 | Msa0941350 | 0.803187 | 3.928381e-49 | -8.615850e-47 |
| Msa0795870 | Msa0941350 | 0.802473 | 5.517497e-49 | -8.615850e-47 |
| Msa0415320 | Msa0941350 | 0.824948 | 6.119800e-54 | -8.615850e-47 |
| Msa0523000 | Msa0941350 | 0.808217 | 3.452460e-50 | -8.615850e-47 |
| Msa0547230 | Msa0941350 | 0.815451 | 9.183023e-52 | -8.615850e-47 |
| Msa0941350 | Msa1132840 | 0.802821 | 4.677398e-49 | -8.615850e-47 |
| Msa0941350 | Msa1374550 | 0.815347 | 9.685193e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941350 | MtrunA17_Chr6g0457271 | 90.251 | 359 | 7 | 4 | 64 | 394 | 1 | 359 | 0.0 | 650 |
| Msa0941350 | MtrunA17_Chr7g0217051 | 52.165 | 462 | 192 | 5 | 5 | 439 | 6 | 465 | 0.0 | 515 |
| Msa0941350 | MtrunA17_Chr4g0040261 | 53.448 | 464 | 185 | 7 | 1 | 437 | 34 | 493 | 1.33e-172 | 493 |
| Msa0941350 | MtrunA17_Chr4g0040251 | 52.700 | 463 | 190 | 8 | 1 | 437 | 1 | 460 | 3.92e-172 | 491 |
| Msa0941350 | MtrunA17_Chr4g0040221 | 51.496 | 468 | 196 | 6 | 1 | 441 | 1 | 464 | 2.08e-171 | 489 |
| Msa0941350 | MtrunA17_Chr4g0040001 | 49.254 | 469 | 202 | 7 | 1 | 437 | 1 | 465 | 2.57e-163 | 468 |
| Msa0941350 | MtrunA17_Chr7g0248011 | 48.796 | 457 | 207 | 5 | 2 | 433 | 3 | 457 | 1.25e-159 | 459 |
| Msa0941350 | MtrunA17_Chr4g0040231 | 47.558 | 471 | 215 | 6 | 1 | 441 | 1 | 469 | 5.07e-155 | 447 |
| Msa0941350 | MtrunA17_Chr4g0040271 | 52.619 | 420 | 167 | 8 | 1 | 393 | 1 | 415 | 6.14e-154 | 443 |
| Msa0941350 | MtrunA17_Chr4g0040011 | 48.618 | 434 | 187 | 7 | 1 | 402 | 9 | 438 | 1.27e-149 | 433 |
| Msa0941350 | MtrunA17_Chr6g0457281 | 71.672 | 293 | 50 | 5 | 89 | 350 | 2 | 292 | 3.42e-147 | 421 |
| Msa0941350 | MtrunA17_Chr1g0147071 | 26.316 | 475 | 284 | 14 | 10 | 433 | 10 | 469 | 9.10e-44 | 159 |
| Msa0941350 | MtrunA17_Chr6g0457291 | 83.099 | 71 | 12 | 0 | 371 | 441 | 1 | 71 | 2.62e-35 | 125 |
| Msa0941350 | MtrunA17_Chr5g0393471 | 30.159 | 252 | 168 | 6 | 185 | 430 | 81 | 330 | 4.32e-25 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941350 | AT3G49190.1 | 27.403 | 489 | 298 | 11 | 1 | 439 | 9 | 490 | 1.56e-52 | 184 |
| Msa0941350 | AT3G49200.1 | 26.186 | 485 | 302 | 11 | 10 | 442 | 26 | 506 | 3.42e-47 | 170 |
| Msa0941350 | AT3G49210.1 | 25.000 | 488 | 300 | 11 | 10 | 436 | 26 | 508 | 6.83e-43 | 158 |
| Msa0941350 | AT5G12420.1 | 26.722 | 479 | 288 | 15 | 10 | 437 | 7 | 473 | 9.52e-43 | 157 |
| Msa0941350 | AT1G72110.1 | 26.866 | 469 | 292 | 17 | 7 | 438 | 9 | 463 | 3.20e-42 | 155 |
| Msa0941350 | AT5G53390.1 | 25.840 | 476 | 289 | 17 | 10 | 436 | 15 | 475 | 1.44e-40 | 151 |
| Msa0941350 | AT5G16350.3 | 26.940 | 464 | 285 | 16 | 5 | 431 | 4 | 450 | 5.31e-40 | 149 |
| Msa0941350 | AT2G38995.2 | 26.258 | 457 | 291 | 12 | 5 | 424 | 16 | 463 | 3.25e-38 | 145 |
| Msa0941350 | AT5G12420.2 | 26.303 | 422 | 250 | 13 | 10 | 381 | 7 | 417 | 3.54e-38 | 144 |
| Msa0941350 | AT1G72110.2 | 26.226 | 469 | 286 | 18 | 7 | 438 | 9 | 454 | 8.69e-38 | 143 |
| Msa0941350 | AT5G16350.1 | 26.611 | 481 | 285 | 17 | 5 | 431 | 4 | 470 | 4.05e-37 | 142 |
| Msa0941350 | AT5G22490.1 | 25.592 | 422 | 255 | 11 | 57 | 431 | 57 | 466 | 1.50e-34 | 134 |
| Msa0941350 | AT5G53380.1 | 26.240 | 484 | 279 | 18 | 5 | 431 | 4 | 466 | 2.19e-32 | 128 |
| Msa0941350 | AT2G38995.3 | 25.888 | 394 | 248 | 10 | 68 | 424 | 8 | 394 | 2.45e-32 | 127 |
| Msa0941350 | AT5G37300.1 | 24.678 | 466 | 304 | 13 | 10 | 438 | 17 | 472 | 1.23e-31 | 126 |
| Msa0941350 | AT5G37300.4 | 24.893 | 466 | 303 | 13 | 10 | 438 | 35 | 490 | 1.38e-31 | 126 |
| Msa0941350 | AT2G38995.4 | 26.446 | 363 | 223 | 10 | 68 | 393 | 8 | 363 | 6.24e-29 | 117 |
| Msa0941350 | AT3G49210.2 | 23.171 | 410 | 250 | 10 | 10 | 359 | 26 | 430 | 1.89e-27 | 114 |
| Msa0941350 | AT5G16350.2 | 25.945 | 397 | 227 | 16 | 5 | 348 | 4 | 386 | 6.79e-25 | 106 |
| Msa0941350 | AT5G37300.2 | 26.761 | 355 | 214 | 12 | 10 | 328 | 35 | 379 | 3.95e-24 | 103 |
| Msa0941350 | AT5G22490.2 | 25.545 | 321 | 180 | 11 | 57 | 330 | 57 | 365 | 8.39e-21 | 94.4 |
| Msa0941350 | AT5G37300.3 | 26.692 | 266 | 162 | 9 | 10 | 249 | 35 | 293 | 5.78e-20 | 91.3 |
| Msa0941350 | AT2G38995.1 | 23.415 | 205 | 143 | 3 | 231 | 424 | 72 | 273 | 1.15e-11 | 65.9 |
Find 74 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCCACTTGAATTTATT+TGG | 0.050307 | 6_3:+15145656 | Msa0941350:CDS |
| CTTAGGTCTATGTTGGATTT+TGG | 0.123041 | 6_3:+15144334 | Msa0941350:intron |
| GATTTGTCACTTGGAAATTC+AGG | 0.273652 | 6_3:-15143998 | None:intergenic |
| TCTTTGGTCACACCTCTTAC+TGG | 0.285700 | 6_3:+15145712 | Msa0941350:CDS |
| TACTGGCATGCTCTTAAATA+TGG | 0.300882 | 6_3:+15145729 | Msa0941350:CDS |
| TCATCAGCACGTGACCTAAT+TGG | 0.310434 | 6_3:-15144400 | None:intergenic |
| CTCAAATGTTTCATTCACTA+TGG | 0.318832 | 6_3:+15144447 | Msa0941350:CDS |
| AGTAACGATCATGAGCTATA+TGG | 0.326285 | 6_3:+15147609 | Msa0941350:CDS |
| GGAGGAGAAACGTGTGTTAA+TGG | 0.330341 | 6_3:-15141915 | None:intergenic |
| AAGGTAGAAATGTGTGTTAA+TGG | 0.337898 | 6_3:-15141866 | None:intergenic |
| GAACAATAATGGTGCTGCTT+GGG | 0.343031 | 6_3:+15145576 | Msa0941350:intron |
| ACCACAAGATAGACCACTTT+GGG | 0.344035 | 6_3:+15144084 | Msa0941350:CDS |
| TGGAGATGGTTACTCTCTAA+TGG | 0.346016 | 6_3:+15144177 | Msa0941350:CDS |
| AAATCCACTTGAATTTATTT+GGG | 0.373517 | 6_3:+15145657 | Msa0941350:CDS |
| ACAACAATCTCAAATATCAT+TGG | 0.392777 | 6_3:+15146888 | Msa0941350:CDS |
| GGTCTATACTTCATGGTTGT+TGG | 0.404548 | 6_3:+15146951 | Msa0941350:CDS |
| TTATAAATCTGTTAAGGAAA+TGG | 0.407623 | 6_3:+15145546 | Msa0941350:CDS |
| AAGATGATCTATCACCAATT+AGG | 0.408538 | 6_3:+15144386 | Msa0941350:CDS |
| GCCAAAGCCATTTGTTCCAC+TGG | 0.413818 | 6_3:-15146912 | None:intergenic |
| GGATCATTAAGCTCTGGAAT+TGG | 0.416306 | 6_3:-15145625 | None:intergenic |
| GCCAGTGGAACAAATGGCTT+TGG | 0.420543 | 6_3:+15146911 | Msa0941350:CDS |
| GGAAAGTTAAGAATTGCATT+TGG | 0.420776 | 6_3:+15147631 | Msa0941350:CDS |
| AGCATAAATGATGTGATTGC+TGG | 0.428607 | 6_3:+15145418 | Msa0941350:CDS |
| CAAGGGTTATAAATCTGTTA+AGG | 0.429440 | 6_3:+15145540 | Msa0941350:CDS |
| CTTAACAGATTTATAACCCT+TGG | 0.432259 | 6_3:-15145539 | None:intergenic |
| GAGGAGAAACGTGTGTTAAT+GGG | 0.443046 | 6_3:-15141914 | None:intergenic |
| TATTGTCCTGTGGGACTCAC+TGG | 0.449146 | 6_3:-15141788 | None:intergenic |
| GAAGAAAGTTGAAGTTAACT+TGG | 0.449319 | 6_3:+15143958 | Msa0941350:CDS |
| CATTGGGCCAGTGGAACAAA+TGG | 0.460169 | 6_3:+15146905 | Msa0941350:CDS |
| GTAACGATCATGAGCTATAT+GGG | 0.461877 | 6_3:+15147610 | Msa0941350:CDS |
| TGACTTGATGGGAGTGTGAA+TGG | 0.463871 | 6_3:-15144244 | None:intergenic |
| AACAATAATGGTGCTGCTTG+GGG | 0.468362 | 6_3:+15145577 | Msa0941350:CDS |
| AGTCAAAGGTCTATACTTCA+TGG | 0.470361 | 6_3:+15146944 | Msa0941350:CDS |
| CTCAACACTTAGGTCTATGT+TGG | 0.474846 | 6_3:+15144327 | Msa0941350:intron |
| AGAACAATAATGGTGCTGCT+TGG | 0.477369 | 6_3:+15145575 | Msa0941350:intron |
| GGAGATGGTTACTCTCTAAT+GGG | 0.478243 | 6_3:+15144178 | Msa0941350:CDS |
| CAACAATCTCAAATATCATT+GGG | 0.482094 | 6_3:+15146889 | Msa0941350:CDS |
| ATGGTTAGCAAGAACAATAA+TGG | 0.489635 | 6_3:+15145565 | Msa0941350:intron |
| AATTTAGGATCATTAAGCTC+TGG | 0.498716 | 6_3:-15145631 | None:intergenic |
| CACACGTTTCTCCTCCATCA+TGG | 0.502269 | 6_3:+15141922 | Msa0941350:CDS |
| TTTAAGAGCATGCCAGTAAG+AGG | 0.504387 | 6_3:-15145724 | None:intergenic |
| TTCAAACTTCATCATGCACT+TGG | 0.508359 | 6_3:+15144157 | Msa0941350:CDS |
| CTCAAATATCATTGGGCCAG+TGG | 0.511478 | 6_3:+15146896 | Msa0941350:CDS |
| ACCTAAAATGTATATACAAA+GGG | 0.513527 | 6_3:-15141825 | None:intergenic |
| AAAGAAATATATTACCATGA+TGG | 0.518415 | 6_3:-15141936 | None:intergenic |
| CTTCATCATGCACTTGGAGA+TGG | 0.529838 | 6_3:+15144163 | Msa0941350:CDS |
| TACCACAAGATAGACCACTT+TGG | 0.531302 | 6_3:+15144083 | Msa0941350:CDS |
| GAGTTGGATGATTTGTCACT+TGG | 0.532091 | 6_3:-15144007 | None:intergenic |
| TCCCAAAGTGGTCTATCTTG+TGG | 0.543889 | 6_3:-15144085 | None:intergenic |
| ATAATGTGAATTTCCCAAAG+TGG | 0.552324 | 6_3:-15144097 | None:intergenic |
| CACCTAAAATGTATATACAA+AGG | 0.561172 | 6_3:-15141826 | None:intergenic |
| GCTTCCCAAATAAATTCAAG+TGG | 0.566789 | 6_3:-15145661 | None:intergenic |
| CTATTCAAATATTGTCCTGT+GGG | 0.566881 | 6_3:-15141797 | None:intergenic |
| CATGGTTGTTGGTCCACCTG+AGG | 0.568111 | 6_3:+15146962 | Msa0941350:CDS |
| GATATCTTGAAGCAATTCAA+AGG | 0.568717 | 6_3:-15141885 | None:intergenic |
| GGGAGTGTGAATGGAAGAGA+AGG | 0.569705 | 6_3:-15144235 | None:intergenic |
| ATATTCATCATAGAATGAGT+TGG | 0.572118 | 6_3:-15144023 | None:intergenic |
| AAAAGCTAACTCAACAGCAT+TGG | 0.573088 | 6_3:+15145495 | Msa0941350:CDS |
| AAAGAAGTGAAAACAAGACT+TGG | 0.583599 | 6_3:+15144478 | Msa0941350:CDS |
| TAGATCATGGACCAATTCGA+TGG | 0.587902 | 6_3:+15143923 | Msa0941350:intron |
| ATGAAGTATAGACCTTTGAC+TGG | 0.589453 | 6_3:-15146942 | None:intergenic |
| TTGGCTAATCATCCAGTCAA+AGG | 0.595631 | 6_3:+15146930 | Msa0941350:CDS |
| ACAATAATGGTGCTGCTTGG+GGG | 0.601910 | 6_3:+15145578 | Msa0941350:CDS |
| ACTGAGCCAGTGAGTCCCAC+AGG | 0.605320 | 6_3:+15141782 | Msa0941350:CDS |
| GCTATTCAAATATTGTCCTG+TGG | 0.606799 | 6_3:-15141798 | None:intergenic |
| AGTGAAAACAAGACTTGGAG+TGG | 0.610857 | 6_3:+15144483 | Msa0941350:CDS |
| GCTGAATACAAGAAATACCA+AGG | 0.611167 | 6_3:+15145522 | Msa0941350:CDS |
| GAAATATATTACCATGATGG+AGG | 0.612928 | 6_3:-15141933 | None:intergenic |
| GGAGTGTGAATGGAAGAGAA+GGG | 0.639937 | 6_3:-15144234 | None:intergenic |
| AGAAACGTGTGTTAATGGGA+AGG | 0.642148 | 6_3:-15141910 | None:intergenic |
| AAGAAATCATATACCTCAGG+TGG | 0.652514 | 6_3:-15146975 | None:intergenic |
| CTGAATACAAGAAATACCAA+GGG | 0.672407 | 6_3:+15145523 | Msa0941350:CDS |
| GAAAACACTCAGAGGACCTG+AGG | 0.672682 | 6_3:+15145753 | Msa0941350:CDS |
| AATATGGTGAAAACACTCAG+AGG | 0.710280 | 6_3:+15145745 | Msa0941350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCATGTTAATTTTTTTT+TGG | + | chr6_3:15141987-15142006 | Msa0941350:intron | 10.0% |
| !!! | TTCATTTCTTTAAAAAAAAA+AGG | - | chr6_3:15142488-15142507 | None:intergenic | 10.0% |
| !! | ATATTATGTATAATAGTATT+AGG | - | chr6_3:15142549-15142568 | None:intergenic | 10.0% |
| !! | AAAGTATAATTAAAATTGAT+AGG | + | chr6_3:15143038-15143057 | Msa0941350:intron | 10.0% |
| !! | TAATAATAGGAAAAATTAAT+TGG | - | chr6_3:15143863-15143882 | None:intergenic | 10.0% |
| !!! | AATTAATTTTTCCTATTATT+AGG | + | chr6_3:15143862-15143881 | Msa0941350:intron | 10.0% |
| !!! | TTTTAATTTTTCCTAATAAT+AGG | - | chr6_3:15143876-15143895 | None:intergenic | 10.0% |
| !! | AAAATTAAAAAAACTAATCA+TGG | + | chr6_3:15143886-15143905 | Msa0941350:intron | 10.0% |
| !! | AAAAATTGTAAGATATTAAA+AGG | + | chr6_3:15144746-15144765 | Msa0941350:intron | 10.0% |
| !! | AAAATTGTAAGATATTAAAA+GGG | + | chr6_3:15144747-15144766 | Msa0941350:intron | 10.0% |
| !!! | TTTAAATTTATTTTTCATGT+GGG | - | chr6_3:15145073-15145092 | None:intergenic | 10.0% |
| !!! | ATTTAAATTTATTTTTCATG+TGG | - | chr6_3:15145074-15145093 | None:intergenic | 10.0% |
| !!! | ATATAAACTTTATTTTTTCA+GGG | - | chr6_3:15146086-15146105 | None:intergenic | 10.0% |
| !!! | TATATAAACTTTATTTTTTC+AGG | - | chr6_3:15146087-15146106 | None:intergenic | 10.0% |
| !! | TGAAAAAATAAAGTTTATAT+AGG | + | chr6_3:15146086-15146105 | Msa0941350:intron | 10.0% |
| !!! | TAGACTATATTATTTTTTTA+GGG | - | chr6_3:15146115-15146134 | None:intergenic | 10.0% |
| !!! | TTAGACTATATTATTTTTTT+AGG | - | chr6_3:15146116-15146135 | None:intergenic | 10.0% |
| !! | AAAACTTGTATATTAATAAA+TGG | + | chr6_3:15146814-15146833 | Msa0941350:intron | 10.0% |
| !! | AAAAAACATAATAAGAATAA+CGG | - | chr6_3:15147239-15147258 | None:intergenic | 10.0% |
| !!! | TTGAAAATACTATTTTCATT+AGG | - | chr6_3:15142222-15142241 | None:intergenic | 15.0% |
| !!! | TGGACTTTTATTTTATTTTT+TGG | + | chr6_3:15144526-15144545 | Msa0941350:intron | 15.0% |
| !! | CATCAAAAATTACAAAAAAA+TGG | + | chr6_3:15144620-15144639 | Msa0941350:intron | 15.0% |
| !! | ATATAATTAGGAGTTTAATT+AGG | - | chr6_3:15144647-15144666 | None:intergenic | 15.0% |
| !! | ATTAAACTCCTAATTATATT+AGG | + | chr6_3:15144648-15144667 | Msa0941350:intron | 15.0% |
| !! | TTAAACTCCTAATTATATTA+GGG | + | chr6_3:15144649-15144668 | Msa0941350:intron | 15.0% |
| !! | AAATTGTAAGATATTAAAAG+GGG | + | chr6_3:15144748-15144767 | Msa0941350:intron | 15.0% |
| !! | TGACATTTATATAAAAAGAA+TGG | - | chr6_3:15145845-15145864 | None:intergenic | 15.0% |
| !! | GGTATAAAAAAAGTTTATAT+AGG | + | chr6_3:15146028-15146047 | Msa0941350:intron | 15.0% |
| !! | ACATACAAAATTTGATATTT+AGG | - | chr6_3:15146239-15146258 | None:intergenic | 15.0% |
| !! | TAAGTTCAATCAATTTATTT+AGG | + | chr6_3:15146475-15146494 | Msa0941350:intron | 15.0% |
| !! | AAGTTCAATCAATTTATTTA+GGG | + | chr6_3:15146476-15146495 | Msa0941350:intron | 15.0% |
| !!! | TTTTATACAATGTTGAAATA+TGG | - | chr6_3:15147088-15147107 | None:intergenic | 15.0% |
| !!! | AAAAATAAACCTTTTAGAAA+AGG | - | chr6_3:15147533-15147552 | None:intergenic | 15.0% |
| !!! | AAGGTTTATTTTTTACATTT+TGG | + | chr6_3:15147540-15147559 | Msa0941350:intron | 15.0% |
| !! | ACCTAAAATGTATATACAAA+GGG | - | chr6_3:15141828-15141847 | None:intergenic | 20.0% |
| !! | AAAGAAATATATTACCATGA+TGG | - | chr6_3:15141939-15141958 | None:intergenic | 20.0% |
| !!! | CACATCCTTTATTTATTTTT+TGG | + | chr6_3:15142043-15142062 | Msa0941350:intron | 20.0% |
| !! | ATGTGCCAAAAAATAAATAA+AGG | - | chr6_3:15142051-15142070 | None:intergenic | 20.0% |
| !! | TATAGAGAAATTATGAACTT+TGG | + | chr6_3:15142137-15142156 | Msa0941350:intron | 20.0% |
| !! | TAAAAAAAATTGGTGTGAAT+CGG | + | chr6_3:15142347-15142366 | Msa0941350:intron | 20.0% |
| !!! | AATCCATTTTTCTAGAAAAA+AGG | + | chr6_3:15142446-15142465 | Msa0941350:intron | 20.0% |
| !!! | TTATAATTTTCTTTTATGGG+TGG | + | chr6_3:15142589-15142608 | Msa0941350:intron | 20.0% |
| !!! | AGATCTTGTAGTTTTTATTT+TGG | - | chr6_3:15142930-15142949 | None:intergenic | 20.0% |
| !! | TTCATGTATGCTATTATATT+GGG | + | chr6_3:15143002-15143021 | Msa0941350:intron | 20.0% |
| !!! | TTTTTTTTTTTTAGGGAGAT+AGG | + | chr6_3:15143076-15143095 | Msa0941350:intron | 20.0% |
| !! | CTAACTATTTAATATTCGAA+AGG | - | chr6_3:15143234-15143253 | None:intergenic | 20.0% |
| !! | GTTATATTTAACGTATTTCT+CGG | - | chr6_3:15143353-15143372 | None:intergenic | 20.0% |
| !! | TATAATAGATAAACAAGAGT+TGG | + | chr6_3:15143413-15143432 | Msa0941350:intron | 20.0% |
| !! | AAAAATGTAGATACTTGTTT+GGG | - | chr6_3:15143609-15143628 | None:intergenic | 20.0% |
| !! | TAAAAATGTAGATACTTGTT+TGG | - | chr6_3:15143610-15143629 | None:intergenic | 20.0% |
| !! | TAGATTACAATTCACATTTA+TGG | - | chr6_3:15143684-15143703 | None:intergenic | 20.0% |
| !! | TTATATGTCAAAAATAGCAA+TGG | + | chr6_3:15144054-15144073 | Msa0941350:CDS | 20.0% |
| !!! | TTGGTATTAAAAATTGACTT+AGG | - | chr6_3:15144274-15144293 | None:intergenic | 20.0% |
| !! | CATAAAACCCTAATATAATT+AGG | - | chr6_3:15144659-15144678 | None:intergenic | 20.0% |
| !!! | ATTATATTAGGGTTTTATGA+TGG | + | chr6_3:15144660-15144679 | Msa0941350:intron | 20.0% |
| !! | ACACATAATTATAACAATTG+AGG | + | chr6_3:15144950-15144969 | Msa0941350:intron | 20.0% |
| !!! | TTATAGCTAATGTATGATTT+TGG | - | chr6_3:15145006-15145025 | None:intergenic | 20.0% |
| !! | AATCATACATTAGCTATAAT+AGG | + | chr6_3:15145007-15145026 | Msa0941350:intron | 20.0% |
| !! | ATCATACATTAGCTATAATA+GGG | + | chr6_3:15145008-15145027 | Msa0941350:intron | 20.0% |
| !! | AACTGAACAACTATTATTAT+GGG | - | chr6_3:15145143-15145162 | None:intergenic | 20.0% |
| !! | AAACTGAACAACTATTATTA+TGG | - | chr6_3:15145144-15145163 | None:intergenic | 20.0% |
| !! | ATAATAATAGTTGTTCAGTT+TGG | + | chr6_3:15145143-15145162 | Msa0941350:intron | 20.0% |
| !! | TAATAATAGTTGTTCAGTTT+GGG | + | chr6_3:15145144-15145163 | Msa0941350:intron | 20.0% |
| !! | TTATAAATCTGTTAAGGAAA+TGG | + | chr6_3:15145546-15145565 | Msa0941350:CDS | 20.0% |
| !! | AAAATCCACTTGAATTTATT+TGG | + | chr6_3:15145656-15145675 | Msa0941350:CDS | 20.0% |
| !! | AAATCCACTTGAATTTATTT+GGG | + | chr6_3:15145657-15145676 | Msa0941350:CDS | 20.0% |
| !! | TAAATTAGTTGTACACATAT+AGG | + | chr6_3:15146007-15146026 | Msa0941350:intron | 20.0% |
| !!! | TGTTTGAAAGTATATTTCTT+AGG | + | chr6_3:15146310-15146329 | Msa0941350:intron | 20.0% |
| !! | TATAGATTGTATTGAATGTA+AGG | + | chr6_3:15146435-15146454 | Msa0941350:intron | 20.0% |
| !!! | TAGTATTGACTTTTTTAGAT+CGG | + | chr6_3:15147377-15147396 | Msa0941350:intron | 20.0% |
| !!! | CATTTTGGTATCATATATTT+TGG | + | chr6_3:15147555-15147574 | Msa0941350:intron | 20.0% |
| !! | TCCCTTTGTATATACATTTT+AGG | + | chr6_3:15141824-15141843 | Msa0941350:CDS | 25.0% |
| ! | CACCTAAAATGTATATACAA+AGG | - | chr6_3:15141829-15141848 | None:intergenic | 25.0% |
| !! | TGTGGAATGTATGTTTATTT+TGG | + | chr6_3:15142255-15142274 | Msa0941350:intron | 25.0% |
| !! | TGTATGTAAAGTAATTTGTG+AGG | - | chr6_3:15142426-15142445 | None:intergenic | 25.0% |
| !!! | GTACCTTTTTTCTAGAAAAA+TGG | - | chr6_3:15142452-15142471 | None:intergenic | 25.0% |
| ! | TAGTTGGAATGGAAATAATA+TGG | + | chr6_3:15142962-15142981 | Msa0941350:intron | 25.0% |
| ! | GTTCATGTATGCTATTATAT+TGG | + | chr6_3:15143001-15143020 | Msa0941350:intron | 25.0% |
| ! | TCATGTATGCTATTATATTG+GGG | + | chr6_3:15143003-15143022 | Msa0941350:intron | 25.0% |
| ! | TTGACATTACCAATTGATAT+AGG | + | chr6_3:15143377-15143396 | Msa0941350:intron | 25.0% |
| ! | ATTTCTATGCCTATATCAAT+TGG | - | chr6_3:15143389-15143408 | None:intergenic | 25.0% |
| ! | TCTCTTGATTAGGAATTAAT+TGG | + | chr6_3:15143482-15143501 | Msa0941350:intron | 25.0% |
| !! | AGAGATAGTCTTTAAAAGTA+TGG | - | chr6_3:15143580-15143599 | None:intergenic | 25.0% |
| ! | ATATTCATCATAGAATGAGT+TGG | - | chr6_3:15144026-15144045 | None:intergenic | 25.0% |
| ! | ATGATGAAGTTTGAATACTA+AGG | - | chr6_3:15144152-15144171 | None:intergenic | 25.0% |
| !! | AAATCTCTTGATAATTGCTT+TGG | - | chr6_3:15144293-15144312 | None:intergenic | 25.0% |
| !!! | ACTTTTAAACCATCTAGTTT+TGG | + | chr6_3:15144560-15144579 | Msa0941350:intron | 25.0% |
| ! | ATATTAAAAGGGGAACAATA+TGG | + | chr6_3:15144758-15144777 | Msa0941350:intron | 25.0% |
| ! | TATTAAAAGGGGAACAATAT+GGG | + | chr6_3:15144759-15144778 | Msa0941350:intron | 25.0% |
| ! | CATATCATTGATGAGTTTAT+AGG | + | chr6_3:15145249-15145268 | Msa0941350:intron | 25.0% |
| !! | ATTGCTGGATTAATTTTCTT+TGG | + | chr6_3:15145433-15145452 | Msa0941350:CDS | 25.0% |
| !! | GATTAATTTTCTTTGGCATT+CGG | + | chr6_3:15145440-15145459 | Msa0941350:CDS | 25.0% |
| !!! | TCAAGTGGATTTTCAAATTT+AGG | - | chr6_3:15145649-15145668 | None:intergenic | 25.0% |
| ! | TGTCTAAAAATTTGATTGAG+AGG | + | chr6_3:15145814-15145833 | Msa0941350:intron | 25.0% |
| ! | GTCTAAAAATTTGATTGAGA+GGG | + | chr6_3:15145815-15145834 | Msa0941350:intron | 25.0% |
| ! | TAGAAACGATTGTTAAGAAA+TGG | + | chr6_3:15146402-15146421 | Msa0941350:intron | 25.0% |
| ! | AGCTTAGATTATGCATAAAT+AGG | - | chr6_3:15146639-15146658 | None:intergenic | 25.0% |
| ! | GTTCTTCAAAACTAATTCAT+AGG | + | chr6_3:15146779-15146798 | Msa0941350:intron | 25.0% |
| ! | TATTAATAAATGGTGTTTCC+AGG | + | chr6_3:15146824-15146843 | Msa0941350:intron | 25.0% |
| ! | ACAACAATCTCAAATATCAT+TGG | + | chr6_3:15146888-15146907 | Msa0941350:CDS | 25.0% |
| ! | CAACAATCTCAAATATCATT+GGG | + | chr6_3:15146889-15146908 | Msa0941350:CDS | 25.0% |
| ! | AAGCAACGTAAAAATCATAA+AGG | + | chr6_3:15147160-15147179 | Msa0941350:intron | 25.0% |
| ! | TCATAAAGGACATGTATATA+CGG | + | chr6_3:15147174-15147193 | Msa0941350:intron | 25.0% |
| !! | ACATTGTTTCCTTTTCTAAA+AGG | + | chr6_3:15147521-15147540 | Msa0941350:intron | 25.0% |
| CTATTCAAATATTGTCCTGT+GGG | - | chr6_3:15141800-15141819 | None:intergenic | 30.0% | |
| AAGGTAGAAATGTGTGTTAA+TGG | - | chr6_3:15141869-15141888 | None:intergenic | 30.0% | |
| GATATCTTGAAGCAATTCAA+AGG | - | chr6_3:15141888-15141907 | None:intergenic | 30.0% | |
| GAAATATATTACCATGATGG+AGG | - | chr6_3:15141936-15141955 | None:intergenic | 30.0% | |
| GTACTTCATGTTTACAATGT+TGG | + | chr6_3:15142184-15142203 | Msa0941350:intron | 30.0% | |
| AACTATGAGAAAATCTTGTG+TGG | + | chr6_3:15142660-15142679 | Msa0941350:intron | 30.0% | |
| !!! | TTATTTTGGTCAAACTAGCT+AGG | - | chr6_3:15142916-15142935 | None:intergenic | 30.0% |
| AAAAACTACAAGATCTAGCA+AGG | + | chr6_3:15142934-15142953 | Msa0941350:intron | 30.0% | |
| ! | GAGATAGGTACATTTTGTTA+AGG | + | chr6_3:15143091-15143110 | Msa0941350:intron | 30.0% |
| AGTGTTTAACACTTCTTCTA+CGG | - | chr6_3:15143303-15143322 | None:intergenic | 30.0% | |
| !! | AAGAAGTGTTAAACACTACA+AGG | + | chr6_3:15143306-15143325 | Msa0941350:intron | 30.0% |
| ! | GTTAAACACTACAAGGTTTT+AGG | + | chr6_3:15143313-15143332 | Msa0941350:intron | 30.0% |
| ! | TCTAAGACTATCTCTTGATT+AGG | + | chr6_3:15143472-15143491 | Msa0941350:intron | 30.0% |
| TTAACTTTGCATGCTAATCA+TGG | - | chr6_3:15143525-15143544 | None:intergenic | 30.0% | |
| AAAACATGCACATACATTTG+TGG | - | chr6_3:15143799-15143818 | None:intergenic | 30.0% | |
| CTACTTGATTGAATAGATCA+TGG | + | chr6_3:15143910-15143929 | Msa0941350:intron | 30.0% | |
| !!! | ATTTTTTCTCTCCATCGAAT+TGG | - | chr6_3:15143937-15143956 | None:intergenic | 30.0% |
| AATTCGATGGAGAGAAAAAA+TGG | + | chr6_3:15143936-15143955 | Msa0941350:CDS | 30.0% | |
| GAAGAAAGTTGAAGTTAACT+TGG | + | chr6_3:15143958-15143977 | Msa0941350:CDS | 30.0% | |
| ATAATGTGAATTTCCCAAAG+TGG | - | chr6_3:15144100-15144119 | None:intergenic | 30.0% | |
| !!! | ACTTAGGTTTTTGACTTGAT+GGG | - | chr6_3:15144258-15144277 | None:intergenic | 30.0% |
| ! | AGTGTTGAGGATAAAATAGA+GGG | - | chr6_3:15144316-15144335 | None:intergenic | 30.0% |
| !! | AAGTGTTGAGGATAAAATAG+AGG | - | chr6_3:15144317-15144336 | None:intergenic | 30.0% |
| ! | CTATTTTATCCTCAACACTT+AGG | + | chr6_3:15144317-15144336 | Msa0941350:intron | 30.0% |
| AAGATGATCTATCACCAATT+AGG | + | chr6_3:15144386-15144405 | Msa0941350:CDS | 30.0% | |
| CTCAAATGTTTCATTCACTA+TGG | + | chr6_3:15144447-15144466 | Msa0941350:CDS | 30.0% | |
| AAAGAAGTGAAAACAAGACT+TGG | + | chr6_3:15144478-15144497 | Msa0941350:CDS | 30.0% | |
| TAGGTGAAATATCTCAAAGT+TGG | + | chr6_3:15144506-15144525 | Msa0941350:intron | 30.0% | |
| CTGCCTCAAATAAAATTTGA+GGG | - | chr6_3:15144587-15144606 | None:intergenic | 30.0% | |
| ACTGCCTCAAATAAAATTTG+AGG | - | chr6_3:15144588-15144607 | None:intergenic | 30.0% | |
| TTATTATGGGTGTACAAACT+AGG | - | chr6_3:15145130-15145149 | None:intergenic | 30.0% | |
| ! | ATGATAGTGCCATAAATTAG+TGG | - | chr6_3:15145232-15145251 | None:intergenic | 30.0% |
| CTGAATACAAGAAATACCAA+GGG | + | chr6_3:15145523-15145542 | Msa0941350:CDS | 30.0% | |
| CTTAACAGATTTATAACCCT+TGG | - | chr6_3:15145542-15145561 | None:intergenic | 30.0% | |
| CAAGGGTTATAAATCTGTTA+AGG | + | chr6_3:15145540-15145559 | Msa0941350:CDS | 30.0% | |
| ATGGTTAGCAAGAACAATAA+TGG | + | chr6_3:15145565-15145584 | Msa0941350:intron | 30.0% | |
| GTACATGCAAAAATGCAAAT+TGG | - | chr6_3:15145606-15145625 | None:intergenic | 30.0% | |
| ! | AATTTAGGATCATTAAGCTC+TGG | - | chr6_3:15145634-15145653 | None:intergenic | 30.0% |
| CAGCAGAAAGAAAAATTCTT+TGG | + | chr6_3:15145696-15145715 | Msa0941350:CDS | 30.0% | |
| ATTAGACTATAAAGTCTTCG+AGG | - | chr6_3:15145983-15146002 | None:intergenic | 30.0% | |
| ! | ATACTTTCGAATTGACTTTG+AGG | + | chr6_3:15146340-15146359 | Msa0941350:intron | 30.0% |
| ! | TACTTTCGAATTGACTTTGA+GGG | + | chr6_3:15146341-15146360 | Msa0941350:intron | 30.0% |
| AAAGCGTAAACAAACTGTTA+GGG | + | chr6_3:15146364-15146383 | Msa0941350:intron | 30.0% | |
| TAGGTTCTTCTTCTATCTTT+AGG | - | chr6_3:15146518-15146537 | None:intergenic | 30.0% | |
| CTCTCTAGTAGTATAATAAC+CGG | - | chr6_3:15146554-15146573 | None:intergenic | 30.0% | |
| GACTAGTGATCATAAAATCA+AGG | - | chr6_3:15146663-15146682 | None:intergenic | 30.0% | |
| TCAACTAATTATGTTATGCC+AGG | + | chr6_3:15146690-15146709 | Msa0941350:intron | 30.0% | |
| CATGTTTGTATAATTACACC+TGG | - | chr6_3:15146711-15146730 | None:intergenic | 30.0% | |
| ! | TTTTGACATCGATGCATATT+TGG | - | chr6_3:15147117-15147136 | None:intergenic | 30.0% |
| TTCAGTCTATGAAGTTGTAT+AGG | + | chr6_3:15147285-15147304 | Msa0941350:intron | 30.0% | |
| !!! | TTTTTTAGATCGGTCAATCT+TGG | + | chr6_3:15147387-15147406 | Msa0941350:intron | 30.0% |
| GGAAAGTTAAGAATTGCATT+TGG | + | chr6_3:15147631-15147650 | Msa0941350:CDS | 30.0% | |
| GCTATTCAAATATTGTCCTG+TGG | - | chr6_3:15141801-15141820 | None:intergenic | 35.0% | |
| TTCAAAAACGACTCATCATG+TGG | + | chr6_3:15142237-15142256 | Msa0941350:intron | 35.0% | |
| CAAACCAAAATTCTTGGTCT+TGG | - | chr6_3:15142687-15142706 | None:intergenic | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | + | chr6_3:15142685-15142704 | Msa0941350:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | - | chr6_3:15142828-15142847 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | chr6_3:15142828-15142847 | Msa0941350:intron | 35.0% | |
| AGAGTAGCATCTTATAGTTG+AGG | - | chr6_3:15142877-15142896 | None:intergenic | 35.0% | |
| ATCTAGCAAGGATCAATAGT+TGG | + | chr6_3:15142946-15142965 | Msa0941350:intron | 35.0% | |
| GGAATGGAAATAATATGGCA+TGG | + | chr6_3:15142967-15142986 | Msa0941350:intron | 35.0% | |
| ! | TGCAAATCATGTGAGCTTTT+TGG | + | chr6_3:15143167-15143186 | Msa0941350:intron | 35.0% |
| ! | GATTTGTCACTTGGAAATTC+AGG | - | chr6_3:15144001-15144020 | None:intergenic | 35.0% |
| TATCCTACAAAAAATGCAGC+TGG | + | chr6_3:15144124-15144143 | Msa0941350:CDS | 35.0% | |
| TTCAAACTTCATCATGCACT+TGG | + | chr6_3:15144157-15144176 | Msa0941350:CDS | 35.0% | |
| !!! | GACTTAGGTTTTTGACTTGA+TGG | - | chr6_3:15144259-15144278 | None:intergenic | 35.0% |
| ! | CTTAGGTCTATGTTGGATTT+TGG | + | chr6_3:15144334-15144353 | Msa0941350:intron | 35.0% |
| !! | GGTCCCTCAAATTTTATTTG+AGG | + | chr6_3:15144581-15144600 | Msa0941350:intron | 35.0% |
| ! | CCATAAATTAGTGGATGCAA+GGG | - | chr6_3:15145223-15145242 | None:intergenic | 35.0% |
| GAGTTTATAGGTGAAGTTGT+TGG | + | chr6_3:15145261-15145280 | Msa0941350:intron | 35.0% | |
| AGCATAAATGATGTGATTGC+TGG | + | chr6_3:15145418-15145437 | Msa0941350:CDS | 35.0% | |
| AAAAGCTAACTCAACAGCAT+TGG | + | chr6_3:15145495-15145514 | Msa0941350:CDS | 35.0% | |
| GCTGAATACAAGAAATACCA+AGG | + | chr6_3:15145522-15145541 | Msa0941350:CDS | 35.0% | |
| GCTTCCCAAATAAATTCAAG+TGG | - | chr6_3:15145664-15145683 | None:intergenic | 35.0% | |
| TACTGGCATGCTCTTAAATA+TGG | + | chr6_3:15145729-15145748 | Msa0941350:CDS | 35.0% | |
| AATATGGTGAAAACACTCAG+AGG | + | chr6_3:15145745-15145764 | Msa0941350:CDS | 35.0% | |
| ! | GAAAGCGTAAACAAACTGTT+AGG | + | chr6_3:15146363-15146382 | Msa0941350:intron | 35.0% |
| AACAATCGTTTCTACCTCTA+AGG | - | chr6_3:15146396-15146415 | None:intergenic | 35.0% | |
| !! | ATACTACTAGAGAGTACTTG+AGG | + | chr6_3:15146560-15146579 | Msa0941350:intron | 35.0% |
| ATGAAGTATAGACCTTTGAC+TGG | - | chr6_3:15146945-15146964 | None:intergenic | 35.0% | |
| AGTCAAAGGTCTATACTTCA+TGG | + | chr6_3:15146944-15146963 | Msa0941350:CDS | 35.0% | |
| AAGAAATCATATACCTCAGG+TGG | - | chr6_3:15146978-15146997 | None:intergenic | 35.0% | |
| TGCAAGAAATCATATACCTC+AGG | - | chr6_3:15146981-15147000 | None:intergenic | 35.0% | |
| !!! | TACGTTGCTTTTTCTCTCTT+CGG | - | chr6_3:15147150-15147169 | None:intergenic | 35.0% |
| TTCGATTGCTAGAGAAGTTT+AGG | + | chr6_3:15147477-15147496 | Msa0941350:intron | 35.0% | |
| TCGATTGCTAGAGAAGTTTA+GGG | + | chr6_3:15147478-15147497 | Msa0941350:intron | 35.0% | |
| AGTAACGATCATGAGCTATA+TGG | + | chr6_3:15147609-15147628 | Msa0941350:CDS | 35.0% | |
| GTAACGATCATGAGCTATAT+GGG | + | chr6_3:15147610-15147629 | Msa0941350:CDS | 35.0% | |
| ! | GCAAAAAATCAAGTGTTGTG+TGG | + | chr6_3:15147678-15147697 | Msa0941350:CDS | 35.0% |
| AGAAACGTGTGTTAATGGGA+AGG | - | chr6_3:15141913-15141932 | None:intergenic | 40.0% | |
| GAGGAGAAACGTGTGTTAAT+GGG | - | chr6_3:15141917-15141936 | None:intergenic | 40.0% | |
| TCTCTGATACTCATCCAAAG+AGG | + | chr6_3:15142632-15142651 | Msa0941350:intron | 40.0% | |
| CTCATAGTTGAGAACCTCTT+TGG | - | chr6_3:15142649-15142668 | None:intergenic | 40.0% | |
| ! | TGGACCAAGACCAAGAATTT+TGG | + | chr6_3:15142680-15142699 | Msa0941350:intron | 40.0% |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | - | chr6_3:15142836-15142855 | None:intergenic | 40.0% |
| CAAACCAAAATTCTTGGTCC+TGG | + | chr6_3:15142834-15142853 | Msa0941350:intron | 40.0% | |
| GCAAGGATCAATAGTTGGAA+TGG | + | chr6_3:15142951-15142970 | Msa0941350:intron | 40.0% | |
| TAGATCATGGACCAATTCGA+TGG | + | chr6_3:15143923-15143942 | Msa0941350:intron | 40.0% | |
| ! | GAGTTGGATGATTTGTCACT+TGG | - | chr6_3:15144010-15144029 | None:intergenic | 40.0% |
| TACCACAAGATAGACCACTT+TGG | + | chr6_3:15144083-15144102 | Msa0941350:CDS | 40.0% | |
| ACCACAAGATAGACCACTTT+GGG | + | chr6_3:15144084-15144103 | Msa0941350:CDS | 40.0% | |
| !!! | GTACCAGCTGCATTTTTTGT+AGG | - | chr6_3:15144130-15144149 | None:intergenic | 40.0% |
| TGGAGATGGTTACTCTCTAA+TGG | + | chr6_3:15144177-15144196 | Msa0941350:CDS | 40.0% | |
| GGAGATGGTTACTCTCTAAT+GGG | + | chr6_3:15144178-15144197 | Msa0941350:CDS | 40.0% | |
| ! | CAACATAGACCTAAGTGTTG+AGG | - | chr6_3:15144329-15144348 | None:intergenic | 40.0% |
| CTCAACACTTAGGTCTATGT+TGG | + | chr6_3:15144327-15144346 | Msa0941350:intron | 40.0% | |
| ! | GGTCTATGTTGGATTTTGGA+TGG | + | chr6_3:15144338-15144357 | Msa0941350:intron | 40.0% |
| AGTGAAAACAAGACTTGGAG+TGG | + | chr6_3:15144483-15144502 | Msa0941350:CDS | 40.0% | |
| AAAACAAGACTTGGAGTGGT+AGG | + | chr6_3:15144487-15144506 | Msa0941350:intron | 40.0% | |
| TTTGAGGGACCAAAACTAGA+TGG | - | chr6_3:15144572-15144591 | None:intergenic | 40.0% | |
| CCCTTGCATCCACTAATTTA+TGG | + | chr6_3:15145220-15145239 | Msa0941350:intron | 40.0% | |
| ! | GCCATAAATTAGTGGATGCA+AGG | - | chr6_3:15145224-15145243 | None:intergenic | 40.0% |
| !! | AGAACAATAATGGTGCTGCT+TGG | + | chr6_3:15145575-15145594 | Msa0941350:intron | 40.0% |
| !! | GAACAATAATGGTGCTGCTT+GGG | + | chr6_3:15145576-15145595 | Msa0941350:intron | 40.0% |
| !! | AACAATAATGGTGCTGCTTG+GGG | + | chr6_3:15145577-15145596 | Msa0941350:CDS | 40.0% |
| !! | GGATCATTAAGCTCTGGAAT+TGG | - | chr6_3:15145628-15145647 | None:intergenic | 40.0% |
| ! | TTTAAGAGCATGCCAGTAAG+AGG | - | chr6_3:15145727-15145746 | None:intergenic | 40.0% |
| TAAGTCTAACTACCAACCTC+AGG | - | chr6_3:15145772-15145791 | None:intergenic | 40.0% | |
| TGTTAGGGTTTGATCCTTAG+AGG | + | chr6_3:15146379-15146398 | Msa0941350:intron | 40.0% | |
| AACCTAAGCACAAGTGTTTC+CGG | + | chr6_3:15146532-15146551 | Msa0941350:intron | 40.0% | |
| TTGGCTAATCATCCAGTCAA+AGG | + | chr6_3:15146930-15146949 | Msa0941350:CDS | 40.0% | |
| GGTCTATACTTCATGGTTGT+TGG | + | chr6_3:15146951-15146970 | Msa0941350:CDS | 40.0% | |
| ! | GCATCGATGTCAAAACCAAT+AGG | + | chr6_3:15147122-15147141 | Msa0941350:intron | 40.0% |
| TTTCTCTCTTCGGTTCCTAT+TGG | - | chr6_3:15147140-15147159 | None:intergenic | 40.0% | |
| ! | GGCTATCATTAACTTGATCG+AGG | + | chr6_3:15147408-15147427 | Msa0941350:intron | 40.0% |
| CAGCAAACAAATGATCGTGA+AGG | - | chr6_3:15147441-15147460 | None:intergenic | 40.0% | |
| GGAGGAGAAACGTGTGTTAA+TGG | - | chr6_3:15141918-15141937 | None:intergenic | 45.0% | |
| ATCAGAGAGAGAGAGATGTG+AGG | - | chr6_3:15142620-15142639 | None:intergenic | 45.0% | |
| ! | TGGACCAGGACCAAGAATTT+TGG | - | chr6_3:15142841-15142860 | None:intergenic | 45.0% |
| GTTGAGGAGAAACACTTGTG+TGG | - | chr6_3:15142861-15142880 | None:intergenic | 45.0% | |
| TCCCAAAGTGGTCTATCTTG+TGG | - | chr6_3:15144088-15144107 | None:intergenic | 45.0% | |
| CTTCATCATGCACTTGGAGA+TGG | + | chr6_3:15144163-15144182 | Msa0941350:CDS | 45.0% | |
| GGAGTGTGAATGGAAGAGAA+GGG | - | chr6_3:15144237-15144256 | None:intergenic | 45.0% | |
| ! | TGACTTGATGGGAGTGTGAA+TGG | - | chr6_3:15144247-15144266 | None:intergenic | 45.0% |
| TCATCAGCACGTGACCTAAT+TGG | - | chr6_3:15144403-15144422 | None:intergenic | 45.0% | |
| !! | ACAATAATGGTGCTGCTTGG+GGG | + | chr6_3:15145578-15145597 | Msa0941350:CDS | 45.0% |
| TCTTTGGTCACACCTCTTAC+TGG | + | chr6_3:15145712-15145731 | Msa0941350:CDS | 45.0% | |
| AACCGGAAACACTTGTGCTT+AGG | - | chr6_3:15146537-15146556 | None:intergenic | 45.0% | |
| CTCAAATATCATTGGGCCAG+TGG | + | chr6_3:15146896-15146915 | Msa0941350:CDS | 45.0% | |
| !!! | TTTAAATCTTTAAAAAAAAT+TGG | + | chr6_3:15142337-15142356 | Msa0941350:intron | 5.0% |
| !!! | TAATTTATAATTTTCTTTTA+TGG | + | chr6_3:15142585-15142604 | Msa0941350:intron | 5.0% |
| !!! | AATTTATAATTTTCTTTTAT+GGG | + | chr6_3:15142586-15142605 | Msa0941350:intron | 5.0% |
| !!! | TGTTTTTTTTTTTTTTTTTT+AGG | + | chr6_3:15143068-15143087 | Msa0941350:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTA+GGG | + | chr6_3:15143069-15143088 | Msa0941350:intron | 5.0% |
| !!! | ATATAAACTTTATTTTTTTA+GGG | - | chr6_3:15146057-15146076 | None:intergenic | 5.0% |
| !!! | TATATAAACTTTATTTTTTT+AGG | - | chr6_3:15146058-15146077 | None:intergenic | 5.0% |
| !! | TAAAAAAATAAAGTTTATAT+AGG | + | chr6_3:15146057-15146076 | Msa0941350:intron | 5.0% |
| TATTGTCCTGTGGGACTCAC+TGG | - | chr6_3:15141791-15141810 | None:intergenic | 50.0% | |
| CACACGTTTCTCCTCCATCA+TGG | + | chr6_3:15141922-15141941 | Msa0941350:CDS | 50.0% | |
| GAGAAACACTTGTGTGGACC+AGG | - | chr6_3:15142855-15142874 | None:intergenic | 50.0% | |
| !! | CATGTGAGCTTTTTGGCCCA+CGG | + | chr6_3:15143174-15143193 | Msa0941350:intron | 50.0% |
| ! | ATGAATGCTGCTTCTGCCGT+GGG | - | chr6_3:15143193-15143212 | None:intergenic | 50.0% |
| ! | AATGAATGCTGCTTCTGCCG+TGG | - | chr6_3:15143194-15143213 | None:intergenic | 50.0% |
| ! | GGGAGTGTGAATGGAAGAGA+AGG | - | chr6_3:15144238-15144257 | None:intergenic | 50.0% |
| GAAAACACTCAGAGGACCTG+AGG | + | chr6_3:15145753-15145772 | Msa0941350:CDS | 50.0% | |
| TCTTCGAGGTGTAGCTCAAG+TGG | - | chr6_3:15145969-15145988 | None:intergenic | 50.0% | |
| GTACATATCTAGCTGCAGCC+TGG | - | chr6_3:15146845-15146864 | None:intergenic | 50.0% | |
| CATTGGGCCAGTGGAACAAA+TGG | + | chr6_3:15146905-15146924 | Msa0941350:CDS | 50.0% | |
| GCCAGTGGAACAAATGGCTT+TGG | + | chr6_3:15146911-15146930 | Msa0941350:CDS | 50.0% | |
| GCCAAAGCCATTTGTTCCAC+TGG | - | chr6_3:15146915-15146934 | None:intergenic | 50.0% | |
| ACACTCAGAGGACCTGAGGT+TGG | + | chr6_3:15145757-15145776 | Msa0941350:intron | 55.0% | |
| CATGGTTGTTGGTCCACCTG+AGG | + | chr6_3:15146962-15146981 | Msa0941350:CDS | 55.0% | |
| ACTGAGCCAGTGAGTCCCAC+AGG | + | chr6_3:15141782-15141801 | Msa0941350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 15141758 | 15147750 | 15141758 | ID=Msa0941350;Name=Msa0941350 |
| chr6_3 | mRNA | 15141758 | 15147750 | 15141758 | ID=Msa0941350-mRNA-1;Parent=Msa0941350;Name=Msa0941350-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0.42|0.25|8|0|442 |
| chr6_3 | exon | 15141758 | 15141943 | 15141758 | ID=Msa0941350-mRNA-1:exon:4597;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15143926 | 15144145 | 15143926 | ID=Msa0941350-mRNA-1:exon:4598;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15144155 | 15144275 | 15144155 | ID=Msa0941350-mRNA-1:exon:4599;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15144339 | 15144504 | 15144339 | ID=Msa0941350-mRNA-1:exon:4600;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15145418 | 15145567 | 15145418 | ID=Msa0941350-mRNA-1:exon:4601;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15145577 | 15145774 | 15145577 | ID=Msa0941350-mRNA-1:exon:4602;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15146846 | 15146983 | 15146846 | ID=Msa0941350-mRNA-1:exon:4603;Parent=Msa0941350-mRNA-1 |
| chr6_3 | exon | 15147601 | 15147750 | 15147601 | ID=Msa0941350-mRNA-1:exon:4604;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15141758 | 15141943 | 15141758 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15143926 | 15144145 | 15143926 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15144155 | 15144275 | 15144155 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15144339 | 15144504 | 15144339 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15145418 | 15145567 | 15145418 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15145577 | 15145774 | 15145577 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15146846 | 15146983 | 15146846 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| chr6_3 | CDS | 15147601 | 15147750 | 15147601 | ID=Msa0941350-mRNA-1:cds;Parent=Msa0941350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
