AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0739730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739730 MtrunA17_Chr5g0439721 63.043 414 144 8 1 408 1 411 6.93e-179 506
Msa0739730 MtrunA17_Chr5g0439641 61.827 427 143 8 1 408 1 426 3.84e-178 504
Msa0739730 MtrunA17_Chr5g0439661 69.110 191 54 2 5 190 1 191 1.67e-93 279
Msa0739730 MtrunA17_Chr5g0439681 71.176 170 49 0 239 408 118 287 5.89e-79 246
Msa0739730 MtrunA17_Chr5g0401791 35.484 434 210 13 24 408 93 505 2.72e-71 233
Msa0739730 MtrunA17_Chr5g0440401 56.410 195 79 5 218 408 1 193 8.50e-66 209
Msa0739730 MtrunA17_Chr8g0354871 47.368 209 91 5 213 408 158 360 1.70e-54 185
Msa0739730 MtrunA17_Chr8g0354871 52.308 65 19 1 122 186 1 53 6.11e-13 69.7
Msa0739730 MtrunA17_Chr5g0440391 76.522 115 25 2 1 114 1 114 1.94e-54 176
Msa0739730 MtrunA17_Chr6g0452611 31.008 387 234 11 30 406 22 385 3.26e-47 166
Msa0739730 MtrunA17_Chr6g0457371 29.049 389 235 11 30 406 23 382 7.50e-47 165
Msa0739730 MtrunA17_Chr6g0452601 29.487 390 237 14 34 406 27 395 7.66e-45 160
Msa0739730 MtrunA17_Chr6g0452531 28.180 401 258 11 15 406 8 387 4.03e-42 153
Msa0739730 MtrunA17_Chr2g0297831 30.733 423 245 17 7 408 47 442 7.42e-42 154
Msa0739730 MtrunA17_Chr6g0452551 29.659 381 238 11 34 406 27 385 1.25e-41 151
Msa0739730 MtrunA17_Chr6g0452501 28.827 392 247 12 25 406 18 387 1.60e-40 149
Msa0739730 MtrunA17_Chr6g0452161 30.653 398 224 15 34 406 27 397 1.78e-40 149
Msa0739730 MtrunA17_Chr7g0265891 27.621 391 253 11 34 408 53 429 2.22e-40 149
Msa0739730 MtrunA17_Chr6g0452561 26.290 407 237 13 33 406 26 402 1.00e-39 147
Msa0739730 MtrunA17_Chr2g0300311 28.736 435 239 17 7 408 30 426 4.30e-39 146
Msa0739730 MtrunA17_Chr8g0354881 66.327 98 32 1 4 100 13 110 1.02e-38 135
Msa0739730 MtrunA17_Chr8g0334971 28.777 417 244 14 25 406 20 418 1.06e-38 144
Msa0739730 MtrunA17_Chr8g0335021 30.000 420 240 14 30 408 25 431 7.86e-37 139
Msa0739730 MtrunA17_Chr3g0138001 28.934 394 235 11 34 406 28 397 1.26e-36 140
Msa0739730 MtrunA17_Chr8g0335061 28.230 418 244 17 25 406 20 417 5.09e-36 137
Msa0739730 MtrunA17_Chr6g0452591 27.114 402 259 13 18 408 41 419 1.10e-35 136
Msa0739730 MtrunA17_Chr3g0118601 25.566 442 278 14 1 408 4 428 1.89e-35 135
Msa0739730 MtrunA17_Chr8g0335071 27.002 437 250 14 11 406 25 433 1.06e-34 134
Msa0739730 MtrunA17_Chr7g0238511 31.378 392 216 14 46 407 43 411 2.43e-34 132
Msa0739730 MtrunA17_Chr8g0354591 28.770 431 231 19 34 408 26 436 3.27e-34 132
Msa0739730 MtrunA17_Chr8g0334951 28.774 424 241 19 18 406 16 413 4.62e-34 131
Msa0739730 MtrunA17_Chr8g0352511 28.217 443 226 17 34 408 31 449 2.09e-32 127
Msa0739730 MtrunA17_Chr6g0452571 29.167 312 197 10 101 406 32 325 2.16e-32 125
Msa0739730 MtrunA17_Chr8g0354581 27.626 438 230 17 34 406 26 441 3.16e-32 127
Msa0739730 MtrunA17_Chr7g0238251 26.411 443 224 11 46 408 46 466 4.40e-31 124
Msa0739730 MtrunA17_Chr7g0238241 29.612 412 227 12 46 406 42 441 7.72e-31 123
Msa0739730 MtrunA17_Chr8g0334911 27.407 405 243 14 29 398 25 413 1.03e-29 119
Msa0739730 MtrunA17_Chr7g0238101 27.570 428 230 13 46 408 43 455 3.69e-29 118
Msa0739730 MtrunA17_Chr8g0335011 24.779 452 261 13 25 406 29 471 2.40e-28 116
Msa0739730 MtrunA17_Chr7g0238111 29.301 372 218 12 23 366 21 375 2.41e-28 115
Msa0739730 MtrunA17_Chr2g0296801 28.696 345 223 11 69 408 1 327 3.54e-28 114
Msa0739730 MtrunA17_Chr7g0218171 27.273 341 178 10 69 406 1 274 4.82e-28 112
Msa0739730 MtrunA17_Chr6g0452541 37.748 151 91 3 258 406 62 211 2.69e-26 105
Msa0739730 MtrunA17_Chr7g0238131 27.845 413 218 14 54 408 1 391 1.02e-25 107
Msa0739730 MtrunA17_Chr7g0238231 36.082 194 118 3 219 408 275 466 1.28e-25 108
Msa0739730 MtrunA17_Chr7g0238211 37.013 154 92 2 257 406 5 157 8.27e-25 100
Msa0739730 MtrunA17_Chr5g0439691 60.417 96 34 4 158 250 1 95 1.69e-24 97.1
Msa0739730 MtrunA17_Chr7g0238191 27.250 400 227 13 47 408 42 415 3.53e-23 100
Msa0739730 MtrunA17_Chr3g0107251 24.936 393 252 12 9 364 5 391 1.36e-22 99.4
Msa0739730 MtrunA17_Chr7g0238051 39.873 158 86 4 257 408 187 341 1.37e-22 98.2
Msa0739730 MtrunA17_Chr7g0238091 37.427 171 99 3 242 408 29 195 4.57e-22 94.0
Msa0739730 MtrunA17_Chr7g0238141 27.481 393 238 13 49 408 45 423 2.12e-21 95.9
Msa0739730 MtrunA17_Chr3g0091831 25.362 414 249 14 5 385 22 408 4.88e-20 92.0
Msa0739730 MtrunA17_Chr7g0238181 28.173 323 195 11 95 403 34 333 7.91e-19 87.4
Msa0739730 MtrunA17_Chr7g0232521 33.526 173 107 3 240 408 28 196 9.77e-19 84.3
Msa0739730 MtrunA17_Chr8g0352491 34.545 165 82 5 266 408 3 163 1.40e-18 83.2
Msa0739730 MtrunA17_Chr2g0297821 34.810 158 94 5 258 408 4 159 2.74e-18 82.4
Msa0739730 MtrunA17_Chr7g0238081 34.437 151 92 3 257 402 5 153 5.10e-18 81.3
Msa0739730 MtrunA17_Chr7g0238171 34.615 156 96 3 257 408 342 495 8.35e-16 79.3
Msa0739730 MtrunA17_Chr7g0238281 34.615 156 94 4 257 407 6 158 1.01e-15 75.1
Msa0739730 MtrunA17_Chr4g0006091 27.389 314 167 15 68 367 10 276 6.66e-14 72.8
Msa0739730 MtrunA17_Chr8g0354621 36.000 125 68 3 296 408 6 130 1.02e-13 68.6
Msa0739730 MtrunA17_Chr7g0242011 27.675 271 171 11 33 283 64 329 7.10e-13 70.1
Msa0739730 MtrunA17_Chr7g0242071 31.429 175 110 6 13 183 12 180 2.83e-12 68.2
Msa0739730 MtrunA17_Chr7g0242151 32.911 158 94 6 33 182 30 183 3.04e-12 68.2
Msa0739730 MtrunA17_Chr4g0002911 25.000 212 141 7 33 229 43 251 1.45e-11 66.2
Msa0739730 MtrunA17_Chr7g0220521 24.413 213 142 4 33 229 42 251 1.80e-11 65.9
Msa0739730 MtrunA17_Chr4g0002901 27.326 172 113 5 33 195 43 211 1.82e-11 65.9
Msa0739730 MtrunA17_Chr7g0242181 31.081 222 113 11 33 228 37 244 3.22e-11 65.1
Msa0739730 MtrunA17_Chr4g0002861 27.907 172 112 5 33 195 43 211 5.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739730 AT3G50120.1 34.532 417 232 10 24 408 95 502 1.90e-74 241
Msa0739730 AT3G50170.1 34.625 413 233 12 24 407 105 509 4.96e-74 241
Msa0739730 AT3G50150.1 34.398 407 235 12 24 407 82 479 1.55e-72 236
Msa0739730 AT3G50140.1 34.634 410 227 13 29 407 110 509 2.08e-72 236
Msa0739730 AT3G50160.1 33.981 412 239 11 7 407 82 471 9.47e-72 234
Msa0739730 AT3G50130.1 33.656 413 236 9 24 407 131 534 1.81e-70 232
Msa0739730 AT3G50180.1 33.663 404 233 11 24 407 170 558 6.15e-63 213
Msa0739730 AT3G50190.1 29.782 413 253 12 7 407 76 463 1.51e-60 204
Msa0739730 AT5G22540.1 32.126 414 256 13 10 407 4 408 1.45e-55 189
Msa0739730 AT4G31980.1 30.334 389 236 12 31 408 292 656 1.29e-50 181
Msa0739730 AT3G47250.3 31.671 401 234 18 34 407 63 450 4.55e-46 165
Msa0739730 AT3G47250.2 31.671 401 234 18 34 407 63 450 4.55e-46 165
Msa0739730 AT3G47250.1 31.671 401 234 18 34 407 63 450 4.55e-46 165
Msa0739730 AT3G50170.2 33.113 302 167 10 24 297 105 399 8.58e-45 160
Msa0739730 AT2G36430.1 28.827 392 247 11 33 408 46 421 9.53e-45 161
Msa0739730 AT3G50150.2 30.655 336 197 12 24 331 82 409 2.45e-44 160
Msa0739730 AT3G50140.2 30.675 326 182 12 7 302 93 404 7.10e-43 155
Msa0739730 AT3G50190.4 29.747 316 189 10 7 314 76 366 1.50e-42 153
Msa0739730 AT3G50190.3 29.747 316 189 10 7 314 76 366 1.50e-42 153
Msa0739730 AT3G50190.2 30.435 299 176 9 7 297 76 350 2.21e-42 152
Msa0739730 AT3G47200.1 28.642 405 257 12 25 407 39 433 8.92e-42 154
Msa0739730 AT3G47200.2 28.642 405 257 12 25 407 39 433 8.92e-42 154
Msa0739730 AT5G22550.2 27.869 427 243 15 34 407 46 460 3.81e-40 149
Msa0739730 AT3G44710.1 27.725 422 236 13 46 407 62 474 1.48e-39 148
Msa0739730 AT5G11290.2 27.561 410 261 13 9 407 13 397 3.16e-39 145
Msa0739730 AT3G47210.1 28.109 402 249 13 9 387 70 454 7.63e-37 140
Msa0739730 AT5G22560.1 26.327 452 244 15 34 408 49 488 8.67e-34 132
Msa0739730 AT2G28580.1 25.123 406 249 16 34 407 111 493 1.52e-27 114
Msa0739730 AT2G28580.2 25.123 406 249 16 34 407 125 507 1.61e-27 114
Msa0739730 AT2G28580.6 25.123 406 249 16 34 407 43 425 1.64e-27 114
Msa0739730 AT5G22550.1 24.228 421 217 12 34 407 46 411 6.67e-27 112
Msa0739730 AT2G44930.1 24.876 402 260 13 34 407 86 473 1.46e-26 111
Msa0739730 AT5G11290.1 26.571 350 224 12 69 407 1 328 1.00e-25 107
Msa0739730 AT2G28580.3 25.797 345 202 15 34 346 125 447 9.90e-23 100
Msa0739730 AT3G44700.1 34.351 131 77 5 30 151 46 176 6.69e-17 79.3
Msa0739730 AT3G60470.1 35.333 150 94 3 258 406 364 511 2.18e-16 81.6
Msa0739730 AT1G65985.1 22.124 452 251 15 24 407 8 426 7.35e-14 73.6
Msa0739730 AT1G65985.2 22.124 452 251 15 24 407 8 426 7.35e-14 73.6
Msa0739730 AT3G02645.1 26.966 178 122 3 238 408 322 498 6.62e-11 64.3

Find 97 sgRNAs with CRISPR-Local

Find 443 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATATATACTAACTTTC+TGG 0.116807 5_1:-58126720 None:intergenic
TCTTTGTGGGCTGGCAATTT+TGG 0.151756 5_1:-58126639 None:intergenic
GATCCTGTCTTTAGTTTATA+TGG 0.197350 5_1:+58127220 Msa0739730:CDS
TGCCAACGAGTTGAACAATT+TGG 0.245536 5_1:-58132920 None:intergenic
TTTCGATCTTCATATGTTAT+TGG 0.247804 5_1:-58132466 None:intergenic
AGGTCTATCTAACTTTCTTT+AGG 0.270992 5_1:-58126746 None:intergenic
TTAGATAGACCTTACATCTT+AGG 0.274580 5_1:+58126757 Msa0739730:five_prime_UTR
TTCGATCTTCATATGTTATT+GGG 0.283326 5_1:-58132465 None:intergenic
CGTGTTGTCTACTACTATTA+AGG 0.283367 5_1:-58132722 None:intergenic
ATAAGTCATTTGATTCGATT+TGG 0.291445 5_1:+58127098 Msa0739730:CDS
GAGCCCTTCATTTCCTAAAA+AGG 0.294102 5_1:+58127008 Msa0739730:CDS
AAAAGATGTTACCTTGTTAT+CGG 0.302978 5_1:-58132797 None:intergenic
AGGTCCAAATGAAATTGTTT+GGG 0.318073 5_1:-58126936 None:intergenic
GGTTCTTCATACGTTGATTC+AGG 0.318291 5_1:+58127309 Msa0739730:CDS
AAGGTCCAAATGAAATTGTT+TGG 0.320013 5_1:-58126937 None:intergenic
CCTTCAATCGAGGTGTTCTT+AGG 0.321521 5_1:+58132692 Msa0739730:CDS
AAACCCCAAACAATTTCATT+TGG 0.324028 5_1:+58126932 Msa0739730:CDS
CGTTCTCAAGATAGTTGATT+AGG 0.331878 5_1:-58132885 None:intergenic
TGAAATTGTTTGGGGTTTGT+AGG 0.339410 5_1:-58126927 None:intergenic
TCAATATGTTATTTAGTAGT+TGG 0.350074 5_1:-58126685 None:intergenic
CCCGACCACTGCTTCTTTGT+GGG 0.350681 5_1:-58126652 None:intergenic
AACATATATACTAACTTTCT+GGG 0.368468 5_1:-58126719 None:intergenic
GGGGAAATGCATGCATATAC+TGG 0.382381 5_1:+58132492 Msa0739730:CDS
ACCCGACCACTGCTTCTTTG+TGG 0.402708 5_1:-58126653 None:intergenic
ACCACTGCTTCTTTGTGGGC+TGG 0.403763 5_1:-58126648 None:intergenic
ATTCAAATGATGATTATTGA+TGG 0.405805 5_1:+58127142 Msa0739730:CDS
ACATGGAGTTAGAAATGAAT+TGG 0.409424 5_1:+58126783 Msa0739730:exon
GCTCCAAGGCCATGAGGTTA+AGG 0.418526 5_1:-58132756 None:intergenic
ATTCCTTAACCTCATGGCCT+TGG 0.421735 5_1:+58132753 Msa0739730:CDS
TTAGAGATGGGTGGGTGGCT+TGG 0.422036 5_1:-58132544 None:intergenic
TTGGTTTGATCAAATCAATA+AGG 0.423164 5_1:+58126802 Msa0739730:CDS
CGATGCTTGTGCTCTTCCAT+AGG 0.436817 5_1:-58126986 None:intergenic
ATGGATTGCAATGGAGAACT+TGG 0.448261 5_1:+58132955 Msa0739730:CDS
ACACTTACTTTAAGAATCCA+TGG 0.451026 5_1:+58133046 Msa0739730:CDS
GTGTTGTCTACTACTATTAA+GGG 0.456703 5_1:-58132721 None:intergenic
TCATTTGGACCTTACCATCA+TGG 0.460295 5_1:+58126947 Msa0739730:CDS
ACGTTGATTCAGGTTCAAAC+TGG 0.460312 5_1:+58127319 Msa0739730:CDS
CCTTACATCTTAGGTGTACA+TGG 0.464507 5_1:+58126766 Msa0739730:exon
GAAGCAGTGGTCGGGTCTGA+TGG 0.465609 5_1:+58126660 Msa0739730:five_prime_UTR
GGAGGACAATTTAAAGCCTA+TGG 0.467185 5_1:+58126970 Msa0739730:CDS
CCTAAGAACACCTCGATTGA+AGG 0.471335 5_1:-58132692 None:intergenic
AAGTTCTCCATTGCAATCCA+TGG 0.472099 5_1:-58132953 None:intergenic
GATGTCATATCATCTTGGTT+TGG 0.474092 5_1:-58126615 None:intergenic
TTGGTGATGTCATATCATCT+TGG 0.474495 5_1:-58126620 None:intergenic
AACATATGAAGATCGAAACT+TGG 0.484244 5_1:+58132471 Msa0739730:CDS
CATTTGGACCTTACCATCAT+GGG 0.492283 5_1:+58126948 Msa0739730:CDS
ACATATGAAGATCGAAACTT+GGG 0.503227 5_1:+58132472 Msa0739730:CDS
CCCACAAAGAAGCAGTGGTC+GGG 0.504350 5_1:+58126652 Msa0739730:five_prime_UTR
GCAATGGAGCTTAAAGAGGC+TGG 0.505520 5_1:+58132625 Msa0739730:CDS
TTTCCATATAAACTAAAGAC+AGG 0.505866 5_1:-58127223 None:intergenic
CCATGTACACCTAAGATGTA+AGG 0.509224 5_1:-58126766 None:intergenic
AGCCAAATTGTTCAACTCGT+TGG 0.520680 5_1:+58132918 Msa0739730:CDS
AGTTCTCCATTGCAATCCAT+GGG 0.524419 5_1:-58132952 None:intergenic
TTAAATTGTCCTCCCCATGA+TGG 0.525645 5_1:-58126961 None:intergenic
CACTTACTTTAAGAATCCAT+GGG 0.526297 5_1:+58133047 Msa0739730:CDS
TTGATTTAGAGATGGGTGGG+TGG 0.531486 5_1:-58132549 None:intergenic
AACGTATGAAGAACCGTCAT+AGG 0.532012 5_1:-58127301 None:intergenic
GTAGGAAACCGTGGAAAAGA+TGG 0.537234 5_1:+58133007 Msa0739730:CDS
TATATACTAACTTTCTGGGC+TGG 0.537343 5_1:-58126715 None:intergenic
AGCTGATGAGAAGAAGCAAT+GGG 0.537660 5_1:+58126850 Msa0739730:CDS
ATACATATTCCTTAACCTCA+TGG 0.539977 5_1:+58132747 Msa0739730:CDS
TTGTCCTCCCCATGATGGTA+AGG 0.541423 5_1:-58126956 None:intergenic
TTCAACTCCGTGACTTGTGA+GGG 0.542571 5_1:-58126896 None:intergenic
ATCTGCAATGGAGCTTAAAG+AGG 0.545147 5_1:+58132621 Msa0739730:CDS
GTTCAACTCCGTGACTTGTG+AGG 0.545369 5_1:-58126897 None:intergenic
TCCTCTTGACTATGATCAGA+AGG 0.545995 5_1:+58127198 Msa0739730:CDS
GCCCACAAAGAAGCAGTGGT+CGG 0.549010 5_1:+58126651 Msa0739730:five_prime_UTR
TAATGTCAATCGATCTGCAA+TGG 0.562618 5_1:+58132609 Msa0739730:CDS
CAATGGAGAACTTGGAGAAG+TGG 0.569190 5_1:+58132963 Msa0739730:CDS
CGTAGTTGAAGCCGATAACA+AGG 0.577409 5_1:+58132786 Msa0739730:CDS
CAAAGTACCCTCACAAGTCA+CGG 0.580405 5_1:+58126889 Msa0739730:CDS
AGAGTGTGATTTCTTACTGT+AGG 0.595533 5_1:+58132989 Msa0739730:CDS
GGTCCAAATGAAATTGTTTG+GGG 0.601188 5_1:-58126935 None:intergenic
TAGCTGATGAGAAGAAGCAA+TGG 0.608374 5_1:+58126849 Msa0739730:CDS
TCCTTCTGATCATAGTCAAG+AGG 0.620363 5_1:-58127199 None:intergenic
ACAAGAGATACAATAGCCCA+TGG 0.623258 5_1:-58133063 None:intergenic
ATTTGGACCTTACCATCATG+GGG 0.624331 5_1:+58126949 Msa0739730:CDS
TTTCTTACTGTAGGAAACCG+TGG 0.625114 5_1:+58132998 Msa0739730:CDS
AGTTGATTAGGATATGACTT+CGG 0.631023 5_1:-58132873 None:intergenic
TGAGAATCAGATACCTATGA+CGG 0.632242 5_1:+58127288 Msa0739730:CDS
GCCAGCCCACAAAGAAGCAG+TGG 0.632655 5_1:+58126647 Msa0739730:five_prime_UTR
TGTCTACTACTATTAAGGGC+GGG 0.632807 5_1:-58132717 None:intergenic
TACAGGACGATTATCATGAG+TGG 0.639334 5_1:+58132410 Msa0739730:intron
AACTACGTGGAGACGCTCCA+AGG 0.645173 5_1:-58132770 None:intergenic
AGAGATGTTTCCTTCAATCG+AGG 0.652766 5_1:+58132682 Msa0739730:CDS
TGTTATCGGCTTCAACTACG+TGG 0.657789 5_1:-58132783 None:intergenic
TTTGATTCGATTTGGACACA+TGG 0.660066 5_1:+58127106 Msa0739730:CDS
TTCTCCATTGCAATCCATGG+GGG 0.668558 5_1:-58132950 None:intergenic
GCTTCAAGAAAAGCGAAACG+AGG 0.673060 5_1:+58132653 Msa0739730:CDS
TTGTCTACTACTATTAAGGG+CGG 0.675393 5_1:-58132718 None:intergenic
TGGACCTTACCATCATGGGG+AGG 0.685510 5_1:+58126952 Msa0739730:CDS
CTTAATAGTAGTAGACAACA+CGG 0.685653 5_1:+58132723 Msa0739730:CDS
GTTCTCCATTGCAATCCATG+GGG 0.702774 5_1:-58132951 None:intergenic
GGAGACGCTCCAAGGCCATG+AGG 0.715446 5_1:-58132762 None:intergenic
TCAGGTTCAAACTGGCACTG+AGG 0.722569 5_1:+58127327 Msa0739730:CDS
CATATGAAGATCGAAACTTG+GGG 0.723089 5_1:+58132473 Msa0739730:CDS
GATTGAAGGAAACATCTCTG+AGG 0.729285 5_1:-58132678 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAATCTATGTAA+TGG - chr5_1:58127913-58127932 None:intergenic 10.0%
!! GAAATTAAAATAAAATGAAA+AGG + chr5_1:58127959-58127978 Msa0739730:intron 10.0%
!! TTTCATTAATAAATAGTTAT+TGG + chr5_1:58128425-58128444 Msa0739730:intron 10.0%
!!! TTTTAATAATATTACCTAAT+AGG - chr5_1:58128503-58128522 None:intergenic 10.0%
!!! AATCTATTTTGTTATTAAAA+AGG + chr5_1:58131109-58131128 Msa0739730:intron 10.0%
!!! CACATATTTTAATTTTATTT+TGG - chr5_1:58131414-58131433 None:intergenic 10.0%
!!! GTGTTATTAATTTTATAATT+TGG - chr5_1:58131489-58131508 None:intergenic 10.0%
!! TTAAAAAAATCCAAAACAAA+CGG - chr5_1:58127494-58127513 None:intergenic 15.0%
!! ATTAATAAATAGTTATTGGT+GGG + chr5_1:58128429-58128448 Msa0739730:intron 15.0%
!! TAGATTAAATATTAGATCAA+GGG + chr5_1:58129736-58129755 Msa0739730:intron 15.0%
!!! TTATTGATTTCCAATAAAAT+TGG - chr5_1:58130732-58130751 None:intergenic 15.0%
!!! ATTTGTTGAAAATTTACATA+AGG - chr5_1:58131051-58131070 None:intergenic 15.0%
!! ATCAACAATACAATAATTAT+TGG - chr5_1:58131184-58131203 None:intergenic 15.0%
!! TACAAATAAAAAAGAAACTA+AGG + chr5_1:58131227-58131246 Msa0739730:intron 15.0%
!!! AGTATAAATTTTACTTTTCA+AGG + chr5_1:58131666-58131685 Msa0739730:intron 15.0%
!!! GTATAAATTTTACTTTTCAA+GGG + chr5_1:58131667-58131686 Msa0739730:intron 15.0%
!!! ATTTTAACATAAGATATTAG+CGG + chr5_1:58131702-58131721 Msa0739730:intron 15.0%
!! TTGTAAATTAATCCATAAAA+AGG - chr5_1:58131810-58131829 None:intergenic 15.0%
!! ATTTACAAAAATCACATATA+TGG + chr5_1:58131822-58131841 Msa0739730:intron 15.0%
!! TTAAATATATCTATACGTAA+AGG - chr5_1:58131907-58131926 None:intergenic 15.0%
!!! TAAGCAAATTTAAACTTTTT+AGG + chr5_1:58132176-58132195 Msa0739730:intron 15.0%
!!! TAAACAAATTTTGACTTTTT+AGG - chr5_1:58132283-58132302 None:intergenic 15.0%
!! GTAATGTTTCAAATAAATAT+TGG - chr5_1:58132393-58132412 None:intergenic 15.0%
!!! ATATTTATTTGAAACATTAC+AGG + chr5_1:58132393-58132412 Msa0739730:intron 15.0%
!!! TCAATATGTTATTTAGTAGT+TGG - chr5_1:58126688-58126707 None:intergenic 20.0%
!! AACATATATACTAACTTTCT+GGG - chr5_1:58126722-58126741 None:intergenic 20.0%
!! TAACATATATACTAACTTTC+TGG - chr5_1:58126723-58126742 None:intergenic 20.0%
!!! TTTTGGAATATCAATTCAAT+TGG - chr5_1:58127043-58127062 None:intergenic 20.0%
!! TGAATTGATATTCCAAAAAT+TGG + chr5_1:58127045-58127064 Msa0739730:CDS 20.0%
!! ATTCAAATGATGATTATTGA+TGG + chr5_1:58127142-58127161 Msa0739730:CDS 20.0%
!! TAAAAAAATCCAAAACAAAC+GGG - chr5_1:58127493-58127512 None:intergenic 20.0%
!!! TTAACTAACTTTTCATTTTG+AGG - chr5_1:58127722-58127741 None:intergenic 20.0%
!!! AACATCATTTTTAGTTTGTT+TGG - chr5_1:58127804-58127823 None:intergenic 20.0%
!! CATTAATAAATAGTTATTGG+TGG + chr5_1:58128428-58128447 Msa0739730:intron 20.0%
!!! ATCTTAAATATGGATTTTCT+AGG - chr5_1:58128829-58128848 None:intergenic 20.0%
!!! TGACTTGTTAATCTTAAATA+TGG - chr5_1:58128839-58128858 None:intergenic 20.0%
!! TAAAGAAACAAAGAAAACAA+CGG + chr5_1:58128925-58128944 Msa0739730:intron 20.0%
!!! CTGTTTTTTTATCTATGTAA+TGG - chr5_1:58129316-58129335 None:intergenic 20.0%
!! GCTCATTTCTTATAATATTT+CGG + chr5_1:58129439-58129458 Msa0739730:intron 20.0%
!! CTAGATTAAATATTAGATCA+AGG + chr5_1:58129735-58129754 Msa0739730:intron 20.0%
!!! TTGTTTGATTGTTTTTGTAA+AGG + chr5_1:58130440-58130459 Msa0739730:intron 20.0%
!!! CTTCTCTTTTACAATAATTT+CGG - chr5_1:58130588-58130607 None:intergenic 20.0%
!! GAATTAAATGTCATGTTTAT+TGG + chr5_1:58130669-58130688 Msa0739730:intron 20.0%
!!! TTACTAAAGTTGATTATGTA+TGG + chr5_1:58131439-58131458 Msa0739730:intron 20.0%
!! GGTGCATATTTAATTATTAA+GGG + chr5_1:58131607-58131626 Msa0739730:intron 20.0%
!!! AATTTGCTTATAATTGACAA+CGG - chr5_1:58132166-58132185 None:intergenic 20.0%
!!! AATTTGTTTATAGTTGACAA+CGG + chr5_1:58132293-58132312 Msa0739730:intron 20.0%
!!! CTTTTTTTTGATTTAGAGAT+GGG - chr5_1:58132559-58132578 None:intergenic 20.0%
!!! TCTTTTTTTTGATTTAGAGA+TGG - chr5_1:58132560-58132579 None:intergenic 20.0%
!! TTGGTTTGATCAAATCAATA+AGG + chr5_1:58126802-58126821 Msa0739730:CDS 25.0%
!! ATAAGTCATTTGATTCGATT+TGG + chr5_1:58127098-58127117 Msa0739730:CDS 25.0%
! TTTCCATATAAACTAAAGAC+AGG - chr5_1:58127226-58127245 None:intergenic 25.0%
!!! ATGTTTTATTTCATAGAGCT+TGG - chr5_1:58127402-58127421 None:intergenic 25.0%
!!! AAATGACTTTTTTAGCAAGA+AGG - chr5_1:58127594-58127613 None:intergenic 25.0%
!!! TTAACTAGCTTTTCATTTTG+AGG - chr5_1:58127621-58127640 None:intergenic 25.0%
!!! AAATGACTTTTTTAGCAAGA+AGG - chr5_1:58127594-58127613 None:intergenic 25.0%
!!! AAAATCTATGTAATGGATCA+TGG - chr5_1:58127906-58127925 None:intergenic 25.0%
!! AAAATGAAAAGGAAGTACAT+TGG + chr5_1:58127970-58127989 Msa0739730:intron 25.0%
!! AAATGAAAAGGAAGTACATT+GGG + chr5_1:58127971-58127990 Msa0739730:intron 25.0%
!!! GATTTTCTAGGTTTAAGATT+TGG - chr5_1:58128817-58128836 None:intergenic 25.0%
!!! TTTTTTTGCTTTTTGTTCAC+AGG - chr5_1:58128894-58128913 None:intergenic 25.0%
! CTCAACATAAACAATAGTTT+AGG + chr5_1:58129336-58129355 Msa0739730:intron 25.0%
!! TTTTGAATTCCTTGATGTTA+TGG + chr5_1:58129549-58129568 Msa0739730:intron 25.0%
! ATTAAGTATCATAAACGCAT+GGG + chr5_1:58129631-58129650 Msa0739730:intron 25.0%
! AATCAAACTATGATAACTGT+TGG - chr5_1:58129794-58129813 None:intergenic 25.0%
! AGGTCATTACAATGTTAATT+AGG + chr5_1:58129841-58129860 Msa0739730:intron 25.0%
! TACAATGTTAATTAGGAAGA+AGG + chr5_1:58129848-58129867 Msa0739730:intron 25.0%
! ACAATGTTAATTAGGAAGAA+GGG + chr5_1:58129849-58129868 Msa0739730:intron 25.0%
! ACACCTAACAATTAATTCAA+CGG + chr5_1:58130042-58130061 Msa0739730:intron 25.0%
! AGAAATGAGAAGTAGATTAT+AGG + chr5_1:58130339-58130358 Msa0739730:intron 25.0%
! GAAATGAGAAGTAGATTATA+GGG + chr5_1:58130340-58130359 Msa0739730:intron 25.0%
!! GTTTTCTACAAAAATTCTCT+CGG - chr5_1:58130404-58130423 None:intergenic 25.0%
!! AGAGAATTTTTGTAGAAAAC+AGG + chr5_1:58130404-58130423 Msa0739730:intron 25.0%
!!! TGATTGTTTTTGTAAAGGAA+TGG + chr5_1:58130445-58130464 Msa0739730:intron 25.0%
! AAAATCAGCAAGAAAGAAAA+TGG + chr5_1:58130499-58130518 Msa0739730:intron 25.0%
! CGAAATTATTGTAAAAGAGA+AGG + chr5_1:58130586-58130605 Msa0739730:intron 25.0%
! AATTATTGTAAAAGAGAAGG+TGG + chr5_1:58130589-58130608 Msa0739730:intron 25.0%
! ATTATTGTAAAAGAGAAGGT+GGG + chr5_1:58130590-58130609 Msa0739730:intron 25.0%
! AAATGTCATGTTTATTGGAA+AGG + chr5_1:58130674-58130693 Msa0739730:intron 25.0%
! GTCATAATTGATGCAATTAT+TGG - chr5_1:58130777-58130796 None:intergenic 25.0%
! ATCAAAAACAAAGTTATGGT+TGG + chr5_1:58130801-58130820 Msa0739730:intron 25.0%
! TCAAAAACAAAGTTATGGTT+GGG + chr5_1:58130802-58130821 Msa0739730:intron 25.0%
! AATTCGAATTCAAATTTGCA+AGG + chr5_1:58130827-58130846 Msa0739730:intron 25.0%
! AGAGATTGTAAAAGAGTTTA+AGG + chr5_1:58130886-58130905 Msa0739730:intron 25.0%
!! AGTTTAAGGAGTGAAATTTT+AGG + chr5_1:58130900-58130919 Msa0739730:intron 25.0%
!!! AAATTTTAGGTTTGACATCA+AGG + chr5_1:58130913-58130932 Msa0739730:intron 25.0%
!!! AATTTTAGGTTTGACATCAA+GGG + chr5_1:58130914-58130933 Msa0739730:intron 25.0%
! AACCCTAAACCTAATAATTT+GGG - chr5_1:58130985-58131004 None:intergenic 25.0%
! AAACCCTAAACCTAATAATT+TGG - chr5_1:58130986-58131005 None:intergenic 25.0%
!! AAATTATTAGGTTTAGGGTT+TGG + chr5_1:58130985-58131004 Msa0739730:intron 25.0%
!! GGGTTGTTTCATATTATATA+GGG - chr5_1:58131393-58131412 None:intergenic 25.0%
!! TGGGTTGTTTCATATTATAT+AGG - chr5_1:58131394-58131413 None:intergenic 25.0%
! TGTTGAAATAGATTAAAGTG+CGG + chr5_1:58131586-58131605 Msa0739730:intron 25.0%
! CGGTGCATATTTAATTATTA+AGG + chr5_1:58131606-58131625 Msa0739730:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG + chr5_1:58131670-58131689 Msa0739730:intron 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG + chr5_1:58131671-58131690 Msa0739730:intron 25.0%
!! GTAATTCAAACTTTTCTTAG+AGG + chr5_1:58131728-58131747 Msa0739730:intron 25.0%
! TGTTTGCGTAATAAAAAGAT+CGG + chr5_1:58132050-58132069 Msa0739730:intron 25.0%
! TTCGATCTTCATATGTTATT+GGG - chr5_1:58132468-58132487 None:intergenic 25.0%
! TTTCGATCTTCATATGTTAT+TGG - chr5_1:58132469-58132488 None:intergenic 25.0%
!! AAAAGATGTTACCTTGTTAT+CGG - chr5_1:58132800-58132819 None:intergenic 25.0%
!! AACATCTTTTGTATGCTTTA+TGG + chr5_1:58132810-58132829 Msa0739730:CDS 25.0%
AGGTCTATCTAACTTTCTTT+AGG - chr5_1:58126749-58126768 None:intergenic 30.0%
TTAGATAGACCTTACATCTT+AGG + chr5_1:58126757-58126776 Msa0739730:five_prime_UTR 30.0%
ACATGGAGTTAGAAATGAAT+TGG + chr5_1:58126783-58126802 Msa0739730:exon 30.0%
AAACCCCAAACAATTTCATT+TGG + chr5_1:58126932-58126951 Msa0739730:CDS 30.0%
AGGTCCAAATGAAATTGTTT+GGG - chr5_1:58126939-58126958 None:intergenic 30.0%
AAGGTCCAAATGAAATTGTT+TGG - chr5_1:58126940-58126959 None:intergenic 30.0%
!! ACACCTTTTTAGGAAATGAA+GGG - chr5_1:58127014-58127033 None:intergenic 30.0%
ATTCCAAAAATTGGATCAAG+TGG + chr5_1:58127054-58127073 Msa0739730:CDS 30.0%
! GATCCTGTCTTTAGTTTATA+TGG + chr5_1:58127220-58127239 Msa0739730:CDS 30.0%
! AATGAAAAGGAAGTACATTG+GGG + chr5_1:58127972-58127991 Msa0739730:intron 30.0%
AGTTTGAATTTGTGGTTCTT+GGG - chr5_1:58128011-58128030 None:intergenic 30.0%
!! TATTGATTTGTTGTATCACC+CGG - chr5_1:58128037-58128056 None:intergenic 30.0%
ACAACAAATCAATACACAAG+TGG + chr5_1:58128043-58128062 Msa0739730:intron 30.0%
AAATCAATACACAAGTGGTT+AGG + chr5_1:58128048-58128067 Msa0739730:intron 30.0%
AACTCTAAACAACACTACTA+CGG + chr5_1:58128076-58128095 Msa0739730:intron 30.0%
! ACTGAATGTTTAGAGTATCA+AGG + chr5_1:58128152-58128171 Msa0739730:intron 30.0%
! AATGTTTAGAGTATCAAGGT+AGG + chr5_1:58128156-58128175 Msa0739730:intron 30.0%
! ATAAAGCATTCACATTGGTA+GGG + chr5_1:58128243-58128262 Msa0739730:intron 30.0%
!!! CAATTTTTTTCCCACATTAG+GGG - chr5_1:58128303-58128322 None:intergenic 30.0%
!!! CCAATTTTTTTCCCACATTA+GGG - chr5_1:58128304-58128323 None:intergenic 30.0%
CCTAATGTGGGAAAAAAATT+GGG + chr5_1:58128302-58128321 Msa0739730:intron 30.0%
CTAATGTGGGAAAAAAATTG+GGG + chr5_1:58128303-58128322 Msa0739730:intron 30.0%
TAATGTGGGAAAAAAATTGG+GGG + chr5_1:58128304-58128323 Msa0739730:intron 30.0%
TCTTATTGAAAAGTGATGTG+AGG - chr5_1:58128376-58128395 None:intergenic 30.0%
! ACATTTAGACCTTTTGATAG+AGG + chr5_1:58128454-58128473 Msa0739730:intron 30.0%
AAGATTAACAAGTCAAGATC+CGG + chr5_1:58128844-58128863 Msa0739730:intron 30.0%
! ACATCTCAAAGTGAGAATTT+TGG + chr5_1:58129187-58129206 Msa0739730:intron 30.0%
! AAAGTGAGAATTTTGGATTG+TGG + chr5_1:58129194-58129213 Msa0739730:intron 30.0%
! AAGTGAGAATTTTGGATTGT+GGG + chr5_1:58129195-58129214 Msa0739730:intron 30.0%
TGGTTGAAAAAATTAGAGAG+AGG + chr5_1:58129226-58129245 Msa0739730:intron 30.0%
ATTAAGTGTCATAAACGCAT+AGG + chr5_1:58129515-58129534 Msa0739730:intron 30.0%
TTAAGTGTCATAAACGCATA+GGG + chr5_1:58129516-58129535 Msa0739730:intron 30.0%
! ATTGACTTTCCATAACATCA+AGG - chr5_1:58129561-58129580 None:intergenic 30.0%
ATTAAGTGTCATAAACGCAT+GGG + chr5_1:58129515-58129534 Msa0739730:intron 30.0%
CATTAAGTATCATAAACGCA+TGG + chr5_1:58129630-58129649 Msa0739730:intron 30.0%
TTGAATTCCTTGATGTTATG+TGG + chr5_1:58129551-58129570 Msa0739730:intron 30.0%
TAGTTTGATTCCTAGCAATT+AGG + chr5_1:58129804-58129823 Msa0739730:intron 30.0%
ATTCCTAGCAATTAGGTTTA+GGG + chr5_1:58129811-58129830 Msa0739730:intron 30.0%
! ATTAGGTTTAGGGTTTGATT+AGG + chr5_1:58129821-58129840 Msa0739730:intron 30.0%
TAATCATGTTATATCAACGC+TGG - chr5_1:58129882-58129901 None:intergenic 30.0%
TCTGTAATTACCTCAATCAT+TGG + chr5_1:58130118-58130137 Msa0739730:intron 30.0%
! TTCTTCTTTTCCAATGATTG+AGG - chr5_1:58130131-58130150 None:intergenic 30.0%
TTGTAAAGGAATGGAAATCT+AGG + chr5_1:58130454-58130473 Msa0739730:intron 30.0%
TGTAAAGGAATGGAAATCTA+GGG + chr5_1:58130455-58130474 Msa0739730:intron 30.0%
GAAAATGGAGAAGAAAAACA+TGG + chr5_1:58130514-58130533 Msa0739730:intron 30.0%
! CTGAAAGAAGCCAATTTTAT+TGG + chr5_1:58130719-58130738 Msa0739730:intron 30.0%
TTATTGGCAATAAATGTCGT+TGG - chr5_1:58130761-58130780 None:intergenic 30.0%
!!! CATAACTTTGTTTTTGATGC+AGG - chr5_1:58130799-58130818 None:intergenic 30.0%
CTGCATCAAAAACAAAGTTA+TGG + chr5_1:58130797-58130816 Msa0739730:intron 30.0%
!! GTAAATGAGAGATTGGTTTA+GGG + chr5_1:58130849-58130868 Msa0739730:intron 30.0%
!! TAAATGAGAGATTGGTTTAG+GGG + chr5_1:58130850-58130869 Msa0739730:intron 30.0%
!! ATTTTAAGAGTCTAACGTTG+TGG - chr5_1:58131265-58131284 None:intergenic 30.0%
ACAACGTTAGACTCTTAAAA+TGG + chr5_1:58131264-58131283 Msa0739730:intron 30.0%
TTGTAATTCAAGCATCTCAT+AGG + chr5_1:58131636-58131655 Msa0739730:intron 30.0%
TGTAATTCAAGCATCTCATA+GGG + chr5_1:58131637-58131656 Msa0739730:intron 30.0%
!! AATTTTACTTTTCAAGGGAG+GGG + chr5_1:58131672-58131691 Msa0739730:intron 30.0%
TAATCCATAAAAAGGACGAA+AGG - chr5_1:58131802-58131821 None:intergenic 30.0%
ATATTGTCTTTCTGCTAGTT+TGG + chr5_1:58132093-58132112 Msa0739730:intron 30.0%
ACGTATGTAGTCCATAAATA+TGG + chr5_1:58132214-58132233 Msa0739730:intron 30.0%
ACGTATGTAGTCCATATTTA+TGG - chr5_1:58132228-58132247 None:intergenic 30.0%
! ATATGGACTACATACGTTTA+TGG + chr5_1:58132231-58132250 Msa0739730:intron 30.0%
! TATGGACTACATACGTTTAT+GGG + chr5_1:58132232-58132251 Msa0739730:intron 30.0%
AACATATGAAGATCGAAACT+TGG + chr5_1:58132471-58132490 Msa0739730:CDS 30.0%
ACATATGAAGATCGAAACTT+GGG + chr5_1:58132472-58132491 Msa0739730:CDS 30.0%
!!! TTTTTGATTTAGAGATGGGT+GGG - chr5_1:58132555-58132574 None:intergenic 30.0%
!!! TTTTTTGATTTAGAGATGGG+TGG - chr5_1:58132556-58132575 None:intergenic 30.0%
GTGTTGTCTACTACTATTAA+GGG - chr5_1:58132724-58132743 None:intergenic 30.0%
CTTAATAGTAGTAGACAACA+CGG + chr5_1:58132723-58132742 Msa0739730:CDS 30.0%
ATACATATTCCTTAACCTCA+TGG + chr5_1:58132747-58132766 Msa0739730:CDS 30.0%
AGTTGATTAGGATATGACTT+CGG - chr5_1:58132876-58132895 None:intergenic 30.0%
! ACACTTACTTTAAGAATCCA+TGG + chr5_1:58133046-58133065 Msa0739730:CDS 30.0%
! CACTTACTTTAAGAATCCAT+GGG + chr5_1:58133047-58133066 Msa0739730:CDS 30.0%
GATGTCATATCATCTTGGTT+TGG - chr5_1:58126618-58126637 None:intergenic 35.0%
!! TTGGTGATGTCATATCATCT+TGG - chr5_1:58126623-58126642 None:intergenic 35.0%
TATATACTAACTTTCTGGGC+TGG - chr5_1:58126718-58126737 None:intergenic 35.0%
! TGAAATTGTTTGGGGTTTGT+AGG - chr5_1:58126930-58126949 None:intergenic 35.0%
GGTCCAAATGAAATTGTTTG+GGG - chr5_1:58126938-58126957 None:intergenic 35.0%
!! CACACCTTTTTAGGAAATGA+AGG - chr5_1:58127015-58127034 None:intergenic 35.0%
CTTCATTTCCTAAAAAGGTG+TGG + chr5_1:58127013-58127032 Msa0739730:CDS 35.0%
!! TTGGTTTTCCACACCTTTTT+AGG - chr5_1:58127024-58127043 None:intergenic 35.0%
!! TTTGATTCGATTTGGACACA+TGG + chr5_1:58127106-58127125 Msa0739730:CDS 35.0%
TGAGAATCAGATACCTATGA+CGG + chr5_1:58127288-58127307 Msa0739730:CDS 35.0%
! TGGCACTGAGGTAATATTAA+TGG + chr5_1:58127339-58127358 Msa0739730:intron 35.0%
! GACTAGAACTTTTACTCAGA+CGG + chr5_1:58127442-58127461 Msa0739730:intron 35.0%
! ATGAAAAGGAAGTACATTGG+GGG + chr5_1:58127973-58127992 Msa0739730:intron 35.0%
GAGTTTGAATTTGTGGTTCT+TGG - chr5_1:58128012-58128031 None:intergenic 35.0%
ACCACAAATTCAAACTCAAC+CGG + chr5_1:58128015-58128034 Msa0739730:intron 35.0%
!!! CTTTATGGCTTGCTGTTTTA+GGG - chr5_1:58128229-58128248 None:intergenic 35.0%
! AAGCCATAAAGCATTCACAT+TGG + chr5_1:58128238-58128257 Msa0739730:intron 35.0%
CTACCAATGTGAATGCTTTA+TGG - chr5_1:58128244-58128263 None:intergenic 35.0%
! CATAAAGCATTCACATTGGT+AGG + chr5_1:58128242-58128261 Msa0739730:intron 35.0%
!! ATTAGGTACCTGGTCTTAAA+TGG - chr5_1:58128275-58128294 None:intergenic 35.0%
! TTTAAGACCAGGTACCTAAT+AGG + chr5_1:58128275-58128294 Msa0739730:intron 35.0%
CCCTAATGTGGGAAAAAAAT+TGG + chr5_1:58128301-58128320 Msa0739730:intron 35.0%
!!! CCCAATTTTTTTCCCACATT+AGG - chr5_1:58128305-58128324 None:intergenic 35.0%
AATGGAGATCCTCTATCAAA+AGG - chr5_1:58128466-58128485 None:intergenic 35.0%
! TTTTGATAGAGGATCTCCAT+TGG + chr5_1:58128465-58128484 Msa0739730:intron 35.0%
AAAAAAGTGATGTGTCCATG+TGG + chr5_1:58128529-58128548 Msa0739730:intron 35.0%
AAAAAGTGATGTGTCCATGT+GGG + chr5_1:58128530-58128549 Msa0739730:intron 35.0%
! TCACATTTGAGGTCTTAAAC+GGG - chr5_1:58128557-58128576 None:intergenic 35.0%
! CTCACATTTGAGGTCTTAAA+CGG - chr5_1:58128558-58128577 None:intergenic 35.0%
! GTTTAAGACCTCAAATGTGA+GGG + chr5_1:58128557-58128576 Msa0739730:intron 35.0%
! AGAATTTTGGATTGTGGGTA+AGG + chr5_1:58129200-58129219 Msa0739730:intron 35.0%
! CAACAGTTGTTCACACATTT+TGG + chr5_1:58129364-58129383 Msa0739730:intron 35.0%
TCATCGTATATCAGGAAAAG+TGG + chr5_1:58129474-58129493 Msa0739730:intron 35.0%
ACACTTAATGCACTCTTGAT+TGG - chr5_1:58129504-58129523 None:intergenic 35.0%
TAAGTGTCATAAACGCATAG+GGG + chr5_1:58129517-58129536 Msa0739730:intron 35.0%
CATTAAGTGTCATAAACGCA+TGG + chr5_1:58129514-58129533 Msa0739730:intron 35.0%
TTAAGTGTCATAAACGCGTA+TGG + chr5_1:58129673-58129692 Msa0739730:intron 35.0%
TAAGTGTCATAAACGCGTAT+GGG + chr5_1:58129674-58129693 Msa0739730:intron 35.0%
GATTCCTAGCAATTAGGTTT+AGG + chr5_1:58129810-58129829 Msa0739730:intron 35.0%
AAACCCTAAACCTAATTGCT+AGG - chr5_1:58129817-58129836 None:intergenic 35.0%
CCTAACAATTAATTCAACGG+CGG + chr5_1:58130045-58130064 Msa0739730:intron 35.0%
! GAAGTAGTTTGGTGACAATT+TGG - chr5_1:58130073-58130092 None:intergenic 35.0%
AACTCTAATACGACATGCAA+AGG - chr5_1:58130154-58130173 None:intergenic 35.0%
TCATCGTTGCAGATTTGAAA+AGG + chr5_1:58130218-58130237 Msa0739730:intron 35.0%
CATCGTTGCAGATTTGAAAA+GGG + chr5_1:58130219-58130238 Msa0739730:intron 35.0%
! GGAGCATGTCATTAATTTTC+TGG + chr5_1:58130261-58130280 Msa0739730:intron 35.0%
! GCATGTCATTAATTTTCTGG+CGG + chr5_1:58130264-58130283 Msa0739730:intron 35.0%
AAGGACAAATTGGAGGAAAA+AGG + chr5_1:58130289-58130308 Msa0739730:intron 35.0%
TCATTTCTACACATCATCAC+TGG - chr5_1:58130327-58130346 None:intergenic 35.0%
AGTAGATTATAGGGTAAGAG+AGG + chr5_1:58130349-58130368 Msa0739730:intron 35.0%
GAAGAAAAACATGGAGAGAA+AGG + chr5_1:58130523-58130542 Msa0739730:intron 35.0%
TGGCTTCTTTCAGTTTCTAA+TGG - chr5_1:58130712-58130731 None:intergenic 35.0%
TTGCAAGGTAAATGAGAGAT+TGG + chr5_1:58130842-58130861 Msa0739730:intron 35.0%
!! GGTAAATGAGAGATTGGTTT+AGG + chr5_1:58130848-58130867 Msa0739730:intron 35.0%
CGCCCAAATTATTAGGTTTA+GGG + chr5_1:58130980-58130999 Msa0739730:intron 35.0%
! TCAAACTTTTCTTAGAGGAG+AGG + chr5_1:58131733-58131752 Msa0739730:intron 35.0%
! TACTCCTTTCGTCCTTTTTA+TGG + chr5_1:58131795-58131814 Msa0739730:intron 35.0%
TGCTTATAATTGACAACGGA+GGG - chr5_1:58132162-58132181 None:intergenic 35.0%
TTGCTTATAATTGACAACGG+AGG - chr5_1:58132163-58132182 None:intergenic 35.0%
TTGTTTATAGTTGACAACGG+AGG + chr5_1:58132296-58132315 Msa0739730:intron 35.0%
!!! ACGGAGGAAGTATTTTGTTA+CGG + chr5_1:58132312-58132331 Msa0739730:intron 35.0%
!!! AGGAAGTATTTTGTTACGGA+AGG + chr5_1:58132316-58132335 Msa0739730:intron 35.0%
CATATGAAGATCGAAACTTG+GGG + chr5_1:58132473-58132492 Msa0739730:CDS 35.0%
TAATGTCAATCGATCTGCAA+TGG + chr5_1:58132609-58132628 Msa0739730:CDS 35.0%
TTGTCTACTACTATTAAGGG+CGG - chr5_1:58132721-58132740 None:intergenic 35.0%
CGTGTTGTCTACTACTATTA+AGG - chr5_1:58132725-58132744 None:intergenic 35.0%
CGTTCTCAAGATAGTTGATT+AGG - chr5_1:58132888-58132907 None:intergenic 35.0%
AGAGTGTGATTTCTTACTGT+AGG + chr5_1:58132989-58133008 Msa0739730:CDS 35.0%
CCATGTACACCTAAGATGTA+AGG - chr5_1:58126769-58126788 None:intergenic 40.0%
CCTTACATCTTAGGTGTACA+TGG + chr5_1:58126766-58126785 Msa0739730:exon 40.0%
TAGCTGATGAGAAGAAGCAA+TGG + chr5_1:58126849-58126868 Msa0739730:CDS 40.0%
AGCTGATGAGAAGAAGCAAT+GGG + chr5_1:58126850-58126869 Msa0739730:CDS 40.0%
TCATTTGGACCTTACCATCA+TGG + chr5_1:58126947-58126966 Msa0739730:CDS 40.0%
CATTTGGACCTTACCATCAT+GGG + chr5_1:58126948-58126967 Msa0739730:CDS 40.0%
ATTTGGACCTTACCATCATG+GGG + chr5_1:58126949-58126968 Msa0739730:CDS 40.0%
TTAAATTGTCCTCCCCATGA+TGG - chr5_1:58126964-58126983 None:intergenic 40.0%
! GGAGGACAATTTAAAGCCTA+TGG + chr5_1:58126970-58126989 Msa0739730:CDS 40.0%
GAGCCCTTCATTTCCTAAAA+AGG + chr5_1:58127008-58127027 Msa0739730:CDS 40.0%
! GAGCCACTTGATCCAATTTT+TGG - chr5_1:58127060-58127079 None:intergenic 40.0%
TCCTCTTGACTATGATCAGA+AGG + chr5_1:58127198-58127217 Msa0739730:CDS 40.0%
TCCTTCTGATCATAGTCAAG+AGG - chr5_1:58127202-58127221 None:intergenic 40.0%
AACGTATGAAGAACCGTCAT+AGG - chr5_1:58127304-58127323 None:intergenic 40.0%
!! GGTTCTTCATACGTTGATTC+AGG + chr5_1:58127309-58127328 Msa0739730:CDS 40.0%
!! ACGTTGATTCAGGTTCAAAC+TGG + chr5_1:58127319-58127338 Msa0739730:CDS 40.0%
! GAACTTTTACTCAGACGGTA+TGG + chr5_1:58127447-58127466 Msa0739730:intron 40.0%
! AATATGACGCCCGTTTGTTT+TGG + chr5_1:58127481-58127500 Msa0739730:intron 40.0%
! TGAAAAGGAAGTACATTGGG+GGG + chr5_1:58127974-58127993 Msa0739730:intron 40.0%
CCACAAATTCAAACTCAACC+GGG + chr5_1:58128016-58128035 Msa0739730:intron 40.0%
ACCTTGAATCGTTTCTGTGT+TGG - chr5_1:58128197-58128216 None:intergenic 40.0%
!!! GCTTTATGGCTTGCTGTTTT+AGG - chr5_1:58128230-58128249 None:intergenic 40.0%
! GGTCTTTACCATTTAAGACC+AGG + chr5_1:58128264-58128283 Msa0739730:intron 40.0%
CTAATAGGTACCCCTAATGT+GGG + chr5_1:58128290-58128309 Msa0739730:intron 40.0%
CTTAAGACCCCAATCTTAAG+TGG + chr5_1:58128349-58128368 Msa0739730:intron 40.0%
TGTGAGGTCCACTTAAGATT+GGG - chr5_1:58128360-58128379 None:intergenic 40.0%
ATGTGAGGTCCACTTAAGAT+TGG - chr5_1:58128361-58128380 None:intergenic 40.0%
! CGTTTAAGACCTCAAATGTG+AGG + chr5_1:58128556-58128575 Msa0739730:intron 40.0%
GACGTTTAAACCATCCACAA+TGG - chr5_1:58128586-58128605 None:intergenic 40.0%
GGATGGTTTAAACGTCCTTT+CGG + chr5_1:58128590-58128609 Msa0739730:intron 40.0%
CCAGATCAATGAACAAACGA+CGG + chr5_1:58128635-58128654 Msa0739730:intron 40.0%
TAGAGCTGTTAAATCCGTCA+CGG - chr5_1:58128690-58128709 None:intergenic 40.0%
! GACGGATTTAACAGCTCTAA+AGG + chr5_1:58128691-58128710 Msa0739730:intron 40.0%
! AAGCTCTGATTCATCTGTGT+GGG - chr5_1:58128788-58128807 None:intergenic 40.0%
! AAAGCTCTGATTCATCTGTG+TGG - chr5_1:58128789-58128808 None:intergenic 40.0%
TTGTTCACAGGAATTGCAGT+TGG - chr5_1:58128882-58128901 None:intergenic 40.0%
GAGATGTAGATCTTAGCGAT+GGG - chr5_1:58129174-58129193 None:intergenic 40.0%
TGAGATGTAGATCTTAGCGA+TGG - chr5_1:58129175-58129194 None:intergenic 40.0%
! ATTTTGGATTGTGGGTAAGG+CGG + chr5_1:58129203-58129222 Msa0739730:intron 40.0%
ATCTCAGCTCATCGTATATC+AGG + chr5_1:58129466-58129485 Msa0739730:intron 40.0%
AAGTGTCATAAACGCGTATG+GGG + chr5_1:58129675-58129694 Msa0739730:intron 40.0%
! TAGCTTGCCACATAACATCA+AGG - chr5_1:58129718-58129737 None:intergenic 40.0%
TGATAATACATCCGCGTCAA+AGG + chr5_1:58129760-58129779 Msa0739730:intron 40.0%
TGGATCTTTAACCTTTGACG+CGG - chr5_1:58129774-58129793 None:intergenic 40.0%
CCGCCGTTGAATTAATTGTT+AGG - chr5_1:58130048-58130067 None:intergenic 40.0%
TGTCACCAAACTACTTCATG+AGG + chr5_1:58130076-58130095 Msa0739730:intron 40.0%
CAAATCTGCAACGATGATCT+CGG - chr5_1:58130215-58130234 None:intergenic 40.0%
!! CATTAATTTTCTGGCGGTGA+AGG + chr5_1:58130270-58130289 Msa0739730:intron 40.0%
CAAATTGGAGGAAAAAGGAG+TGG + chr5_1:58130294-58130313 Msa0739730:intron 40.0%
TGGAAATCTAGGGATAAGAG+TGG + chr5_1:58130465-58130484 Msa0739730:intron 40.0%
GGAAATCTAGGGATAAGAGT+GGG + chr5_1:58130466-58130485 Msa0739730:intron 40.0%
AATTCATTCTGGTCGTTGGA+TGG - chr5_1:58130958-58130977 None:intergenic 40.0%
ATCCAACGACCAGAATGAAT+TGG + chr5_1:58130957-58130976 Msa0739730:intron 40.0%
GAATTGGCGCCCAAATTATT+AGG + chr5_1:58130973-58130992 Msa0739730:intron 40.0%
GCGCCCAAATTATTAGGTTT+AGG + chr5_1:58130979-58130998 Msa0739730:intron 40.0%
! ATTAGGTTTAGGGTTTGGAG+TGG + chr5_1:58130990-58131009 Msa0739730:intron 40.0%
ATTCAAGCATCTCATAGGGA+AGG + chr5_1:58131641-58131660 Msa0739730:intron 40.0%
TTCAAGCATCTCATAGGGAA+GGG + chr5_1:58131642-58131661 Msa0739730:intron 40.0%
AGATCGGAAAGACAAACATG+TGG + chr5_1:58132066-58132085 Msa0739730:intron 40.0%
TACAGGACGATTATCATGAG+TGG + chr5_1:58132410-58132429 Msa0739730:intron 40.0%
ATCTGCAATGGAGCTTAAAG+AGG + chr5_1:58132621-58132640 Msa0739730:CDS 40.0%
GATTGAAGGAAACATCTCTG+AGG - chr5_1:58132681-58132700 None:intergenic 40.0%
AGAGATGTTTCCTTCAATCG+AGG + chr5_1:58132682-58132701 Msa0739730:CDS 40.0%
TGTCTACTACTATTAAGGGC+GGG - chr5_1:58132720-58132739 None:intergenic 40.0%
AGCCAAATTGTTCAACTCGT+TGG + chr5_1:58132918-58132937 Msa0739730:CDS 40.0%
! TGCCAACGAGTTGAACAATT+TGG - chr5_1:58132923-58132942 None:intergenic 40.0%
AGTTCTCCATTGCAATCCAT+GGG - chr5_1:58132955-58132974 None:intergenic 40.0%
AAGTTCTCCATTGCAATCCA+TGG - chr5_1:58132956-58132975 None:intergenic 40.0%
! ATGGATTGCAATGGAGAACT+TGG + chr5_1:58132955-58132974 Msa0739730:CDS 40.0%
TTTCTTACTGTAGGAAACCG+TGG + chr5_1:58132998-58133017 Msa0739730:CDS 40.0%
!!! TCTTTGTGGGCTGGCAATTT+TGG - chr5_1:58126642-58126661 None:intergenic 45.0%
! CAAAGTACCCTCACAAGTCA+CGG + chr5_1:58126889-58126908 Msa0739730:CDS 45.0%
! TTCAACTCCGTGACTTGTGA+GGG - chr5_1:58126899-58126918 None:intergenic 45.0%
GAATTTGTGGTTCTTGGGTC+AGG - chr5_1:58128006-58128025 None:intergenic 45.0%
CCCGGTTGAGTTTGAATTTG+TGG - chr5_1:58128019-58128038 None:intergenic 45.0%
TCGATTTCGTATCCACACGT+GGG - chr5_1:58128115-58128134 None:intergenic 45.0%
TTCGATTTCGTATCCACACG+TGG - chr5_1:58128116-58128135 None:intergenic 45.0%
GCCAACACAGAAACGATTCA+AGG + chr5_1:58128193-58128212 Msa0739730:intron 45.0%
!!! TTGCTGTTTTAGGGAGCTGT+TGG - chr5_1:58128220-58128239 None:intergenic 45.0%
!! CCACATTAGGGGTACCTATT+AGG - chr5_1:58128292-58128311 None:intergenic 45.0%
CCTAATAGGTACCCCTAATG+TGG + chr5_1:58128289-58128308 Msa0739730:intron 45.0%
GTGAGGTCCACTTAAGATTG+GGG - chr5_1:58128359-58128378 None:intergenic 45.0%
ATAGAGGATCTCCATTGGAG+TGG + chr5_1:58128470-58128489 Msa0739730:intron 45.0%
TAGGTACTCAACCACTCCAA+TGG - chr5_1:58128484-58128503 None:intergenic 45.0%
GGAGTGGTTGAGTACCTATT+AGG + chr5_1:58128486-58128505 Msa0739730:intron 45.0%
AATGGAGACCCTCACATTTG+AGG - chr5_1:58128568-58128587 None:intergenic 45.0%
AAATGTGAGGGTCTCCATTG+TGG + chr5_1:58128569-58128588 Msa0739730:intron 45.0%
!! TCAGATTGGTTTGGTCCGAA+AGG - chr5_1:58128608-58128627 None:intergenic 45.0%
! GGACTTCGATCAGATTGGTT+TGG - chr5_1:58128617-58128636 None:intergenic 45.0%
GATCTGGACTTCGATCAGAT+TGG - chr5_1:58128622-58128641 None:intergenic 45.0%
CCGTCGTTTGTTCATTGATC+TGG - chr5_1:58128638-58128657 None:intergenic 45.0%
TTAAATCCGTCACGGTTGTC+TGG - chr5_1:58128682-58128701 None:intergenic 45.0%
AGTGCATAGACGCTTTGTGT+TGG - chr5_1:58128737-58128756 None:intergenic 45.0%
AAACCCTTTCGAGCAACATC+TGG + chr5_1:58128757-58128776 Msa0739730:intron 45.0%
TTCACAGGAATTGCAGTTGG+TGG - chr5_1:58128879-58128898 None:intergenic 45.0%
!! TTTGGTGTTGCTGAAGCTGT+TGG - chr5_1:58129023-58129042 None:intergenic 45.0%
CAAAACCAGAAGAGAACCGT+CGG + chr5_1:58129039-58129058 Msa0739730:intron 45.0%
ATGTAGATCTTAGCGATGGG+TGG - chr5_1:58129171-58129190 None:intergenic 45.0%
ATTAGAGAGAGGTGAGAGAG+AGG + chr5_1:58129237-58129256 Msa0739730:intron 45.0%
CTACGCCTCATGAAGTAGTT+TGG - chr5_1:58130084-58130103 None:intergenic 45.0%
TGAGGCGTAGAAGAATCAAG+AGG + chr5_1:58130094-58130113 Msa0739730:intron 45.0%
CGTTGCAGATTTGAAAAGGG+AGG + chr5_1:58130222-58130241 Msa0739730:intron 45.0%
TAAGAGAGGATCCAGAAGGT+AGG + chr5_1:58130363-58130382 Msa0739730:intron 45.0%
AAGAGAGGATCCAGAAGGTA+GGG + chr5_1:58130364-58130383 Msa0739730:intron 45.0%
ATTTGGGCGCCAATTCATTC+TGG - chr5_1:58130969-58130988 None:intergenic 45.0%
GGGGAAATGCATGCATATAC+TGG + chr5_1:58132492-58132511 Msa0739730:CDS 45.0%
TTGATTTAGAGATGGGTGGG+TGG - chr5_1:58132552-58132571 None:intergenic 45.0%
GCTTCAAGAAAAGCGAAACG+AGG + chr5_1:58132653-58132672 Msa0739730:CDS 45.0%
CCTAAGAACACCTCGATTGA+AGG - chr5_1:58132695-58132714 None:intergenic 45.0%
! CCTTCAATCGAGGTGTTCTT+AGG + chr5_1:58132692-58132711 Msa0739730:CDS 45.0%
ATTCCTTAACCTCATGGCCT+TGG + chr5_1:58132753-58132772 Msa0739730:CDS 45.0%
!! TGTTATCGGCTTCAACTACG+TGG - chr5_1:58132786-58132805 None:intergenic 45.0%
CGTAGTTGAAGCCGATAACA+AGG + chr5_1:58132786-58132805 Msa0739730:CDS 45.0%
TTCTCCATTGCAATCCATGG+GGG - chr5_1:58132953-58132972 None:intergenic 45.0%
GTTCTCCATTGCAATCCATG+GGG - chr5_1:58132954-58132973 None:intergenic 45.0%
CAATGGAGAACTTGGAGAAG+TGG + chr5_1:58132963-58132982 Msa0739730:CDS 45.0%
GTAGGAAACCGTGGAAAAGA+TGG + chr5_1:58133007-58133026 Msa0739730:CDS 45.0%
!!! ACATATTTTAATTTTATTTT+GGG - chr5_1:58131413-58131432 None:intergenic 5.0%
!! ATTTCTTTATAATTTAAATA+TGG - chr5_1:58131511-58131530 None:intergenic 5.0%
!!! AAGAAATAATTTTTTTTAAA+TGG + chr5_1:58131524-58131543 Msa0739730:intron 5.0%
! GTTCAACTCCGTGACTTGTG+AGG - chr5_1:58126900-58126919 None:intergenic 50.0%
TTGTCCTCCCCATGATGGTA+AGG - chr5_1:58126959-58126978 None:intergenic 50.0%
CGATGCTTGTGCTCTTCCAT+AGG - chr5_1:58126989-58127008 None:intergenic 50.0%
TCAGGTTCAAACTGGCACTG+AGG + chr5_1:58127327-58127346 Msa0739730:CDS 50.0%
!! AGGGGTACCTATTAGGTACC+TGG - chr5_1:58128285-58128304 None:intergenic 50.0%
GGGGTCTTAAGTTAGACCCT+GGG - chr5_1:58128340-58128359 None:intergenic 50.0%
TGGGGTCTTAAGTTAGACCC+TGG - chr5_1:58128341-58128360 None:intergenic 50.0%
GCATAGACGCTTTGTGTTGG+CGG - chr5_1:58128734-58128753 None:intergenic 50.0%
TCGCCAGATGTTGCTCGAAA+GGG - chr5_1:58128763-58128782 None:intergenic 50.0%
!! CAGTTGGTGGTGGTTTGTTC+CGG - chr5_1:58128866-58128885 None:intergenic 50.0%
!! ACAGGAATTGCAGTTGGTGG+TGG - chr5_1:58128876-58128895 None:intergenic 50.0%
GCAACCAGCAAAAAGCTTCC+CGG + chr5_1:58128947-58128966 Msa0739730:intron 50.0%
!!! CGACGGTTCTCTTCTGGTTT+TGG - chr5_1:58129041-58129060 None:intergenic 50.0%
CACCTCTGTGCTTGTTCCTT+CGG - chr5_1:58129122-58129141 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr5_1:58129268-58129287 Msa0739730:intron 50.0%
! ACTGTCGCGATCTAGAGCAA+TGG + chr5_1:58130181-58130200 Msa0739730:intron 50.0%
! CGCGATCTAGAGCAATGGAT+CGG + chr5_1:58130186-58130205 Msa0739730:intron 50.0%
! GGAGGAAGCGTAAGAAGAGT+AGG + chr5_1:58130240-58130259 Msa0739730:intron 50.0%
TCTGGCGGTGAAGGACAAAT+TGG + chr5_1:58130279-58130298 Msa0739730:intron 50.0%
AGGGTAAGAGAGGATCCAGA+AGG + chr5_1:58130359-58130378 Msa0739730:intron 50.0%
AGAGAGGATCCAGAAGGTAG+GGG + chr5_1:58130365-58130384 Msa0739730:intron 50.0%
CAGAAGGTAGGGGATGATGA+GGG + chr5_1:58130375-58130394 Msa0739730:intron 50.0%
CGCCAATTCATTCTGGTCGT+TGG - chr5_1:58130962-58130981 None:intergenic 50.0%
GCAATGGAGCTTAAAGAGGC+TGG + chr5_1:58132625-58132644 Msa0739730:CDS 50.0%
! CTTGCACGCCATCTTTTCCA+CGG - chr5_1:58133018-58133037 None:intergenic 50.0%
ACCACTGCTTCTTTGTGGGC+TGG - chr5_1:58126651-58126670 None:intergenic 55.0%
GCCCACAAAGAAGCAGTGGT+CGG + chr5_1:58126651-58126670 Msa0739730:five_prime_UTR 55.0%
CCCGACCACTGCTTCTTTGT+GGG - chr5_1:58126655-58126674 None:intergenic 55.0%
CCCACAAAGAAGCAGTGGTC+GGG + chr5_1:58126652-58126671 Msa0739730:five_prime_UTR 55.0%
ACCCGACCACTGCTTCTTTG+TGG - chr5_1:58126656-58126675 None:intergenic 55.0%
TGGACCTTACCATCATGGGG+AGG + chr5_1:58126952-58126971 Msa0739730:CDS 55.0%
TTGGGGGTCTCTTAAGACCC+AGG + chr5_1:58128320-58128339 Msa0739730:intron 55.0%
TGGGGGTCTCTTAAGACCCA+GGG + chr5_1:58128321-58128340 Msa0739730:intron 55.0%
GGTCTTAAACGGGTCCCACA+TGG - chr5_1:58128547-58128566 None:intergenic 55.0%
GTGAGGGTCTCCATTGTGGA+TGG + chr5_1:58128573-58128592 Msa0739730:intron 55.0%
CTCGCCAGATGTTGCTCGAA+AGG - chr5_1:58128764-58128783 None:intergenic 55.0%
! TGGTCCGGGAAGCTTTTTGC+TGG - chr5_1:58128954-58128973 None:intergenic 55.0%
!! TCTTCACGTCGGTTCTGTGG+TGG - chr5_1:58128974-58128993 None:intergenic 55.0%
!! GGCTCTTCTGGTTCGATAGC+CGG - chr5_1:58128999-58129018 None:intergenic 55.0%
GAAGCTGTTGGAGGCTCTTC+TGG - chr5_1:58129011-58129030 None:intergenic 55.0%
!! GGTGTTGCTGAAGCTGTTGG+AGG - chr5_1:58129020-58129039 None:intergenic 55.0%
! GTTCTGTCCGGTTTGTGCGT+CGG - chr5_1:58129069-58129088 None:intergenic 55.0%
GACGCACAAACCGGACAGAA+CGG + chr5_1:58129068-58129087 Msa0739730:intron 55.0%
CTCTGTGCTTGTTCCTTCGG+CGG - chr5_1:58129119-58129138 None:intergenic 55.0%
CGAAGGAACAAGCACAGAGG+TGG + chr5_1:58129120-58129139 Msa0739730:intron 55.0%
AAGCACAGAGGTGGTGCGAA+TGG + chr5_1:58129129-58129148 Msa0739730:intron 55.0%
TTGGATTGTGGGTAAGGCGG+TGG + chr5_1:58129206-58129225 Msa0739730:intron 55.0%
GGCGGTGAAGGACAAATTGG+AGG + chr5_1:58130282-58130301 Msa0739730:intron 55.0%
CCTCATCATCCCCTACCTTC+TGG - chr5_1:58130377-58130396 None:intergenic 55.0%
CCAGAAGGTAGGGGATGATG+AGG + chr5_1:58130374-58130393 Msa0739730:intron 55.0%
TTAGAGATGGGTGGGTGGCT+TGG - chr5_1:58132547-58132566 None:intergenic 55.0%
GCTCCAAGGCCATGAGGTTA+AGG - chr5_1:58132759-58132778 None:intergenic 55.0%
AACTACGTGGAGACGCTCCA+AGG - chr5_1:58132773-58132792 None:intergenic 55.0%
GTTGGCAAAAGAAGCCCCCA+TGG + chr5_1:58132936-58132955 Msa0739730:CDS 55.0%
! GAAGCCCCCATGGATTGCAA+TGG + chr5_1:58132946-58132965 Msa0739730:CDS 55.0%
GCCAGCCCACAAAGAAGCAG+TGG + chr5_1:58126647-58126666 Msa0739730:five_prime_UTR 60.0%
GAAGCAGTGGTCGGGTCTGA+TGG + chr5_1:58126660-58126679 Msa0739730:five_prime_UTR 60.0%
TATCCACACGTGGGCTCGCT+GGG - chr5_1:58128106-58128125 None:intergenic 60.0%
GACGGAGCACAGTCCACCTA+CGG + chr5_1:58128653-58128672 Msa0739730:intron 60.0%
!! ACGTCGGTTCTGTGGTGGTC+CGG - chr5_1:58128969-58128988 None:intergenic 60.0%
!! GCGTCTTCACGTCGGTTCTG+TGG - chr5_1:58128977-58128996 None:intergenic 60.0%
CAGAACCGACGTGAAGACGC+CGG + chr5_1:58128977-58128996 Msa0739730:intron 60.0%
GATAGCCGGCGTCTTCACGT+CGG - chr5_1:58128985-58129004 None:intergenic 60.0%
GTGGTCCGACGGTTCTCTTC+TGG - chr5_1:58129047-58129066 None:intergenic 60.0%
! TTTGTGCGTCGGTGGTCCGA+CGG - chr5_1:58129058-58129077 None:intergenic 60.0%
TCGACGTGCACCGTTCTGTC+CGG - chr5_1:58129081-58129100 None:intergenic 60.0%
ACAACCTGAACCTCCGCCGA+AGG + chr5_1:58129103-58129122 Msa0739730:intron 60.0%
TGTTCCTTCGGCGGAGGTTC+AGG - chr5_1:58129110-58129129 None:intergenic 60.0%
TGTGCTTGTTCCTTCGGCGG+AGG - chr5_1:58129116-58129135 None:intergenic 60.0%
CGCCGAAGGAACAAGCACAG+AGG + chr5_1:58129117-58129136 Msa0739730:intron 60.0%
ACAGAGGTGGTGCGAATGGC+AGG + chr5_1:58129133-58129152 Msa0739730:intron 60.0%
GCGATGGGTGGTGCGAGAAT+TGG - chr5_1:58129159-58129178 None:intergenic 60.0%
GTATCCACACGTGGGCTCGC+TGG - chr5_1:58128107-58128126 None:intergenic 65.0%
GGTTGTCTGGACGCCGTAGG+TGG - chr5_1:58128669-58128688 None:intergenic 65.0%
CACGGTTGTCTGGACGCCGT+AGG - chr5_1:58128672-58128691 None:intergenic 65.0%
CGGCGTCCAGACAACCGTGA+CGG + chr5_1:58128673-58128692 Msa0739730:intron 65.0%
!! CGTCGGTTCTGTGGTGGTCC+GGG - chr5_1:58128968-58128987 None:intergenic 65.0%
CGGACCACCGACGCACAAAC+CGG + chr5_1:58129059-58129078 Msa0739730:intron 65.0%
! CTGTCCGGTTTGTGCGTCGG+TGG - chr5_1:58129066-58129085 None:intergenic 65.0%
GGAGACGCTCCAAGGCCATG+AGG - chr5_1:58132765-58132784 None:intergenic 65.0%
CAGCCCAGCGAGCCCACGTG+TGG + chr5_1:58128100-58128119 Msa0739730:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 58126614 58133074 58126614 ID=Msa0739730;Name=Msa0739730
chr5_1 mRNA 58126614 58133074 58126614 ID=Msa0739730-mRNA-1;Parent=Msa0739730;Name=Msa0739730-mRNA-1;_AED=0.27;_eAED=0.27;_QI=171|1|0.5|1|1|1|2|0|408
chr5_1 exon 58126614 58127348 58126614 ID=Msa0739730-mRNA-1:exon:16573;Parent=Msa0739730-mRNA-1
chr5_1 exon 58132415 58133074 58132415 ID=Msa0739730-mRNA-1:exon:16574;Parent=Msa0739730-mRNA-1
chr5_1 five_prime_UTR 58126614 58126784 58126614 ID=Msa0739730-mRNA-1:five_prime_utr;Parent=Msa0739730-mRNA-1
chr5_1 CDS 58126785 58127348 58126785 ID=Msa0739730-mRNA-1:cds;Parent=Msa0739730-mRNA-1
chr5_1 CDS 58132415 58133074 58132415 ID=Msa0739730-mRNA-1:cds;Parent=Msa0739730-mRNA-1
Gene Sequence

>Msa0739730

ATGGAGTTAGAAATGAATTGGTTTGATCAAATCAATAAGGAGATCAAGAGCAATGCTTCTTCAATAGCTGATGAGAAGAAGCAATGGGAGAAGCATTCAATTTACAAAGTACCCTCACAAGTCACGGAGTTGAACAAAAAAGCCTACAAACCCCAAACAATTTCATTTGGACCTTACCATCATGGGGAGGACAATTTAAAGCCTATGGAAGAGCACAAGCATCGAGCCCTTCATTTCCTAAAAAGGTGTGGAAAACCAATTGAATTGATATTCCAAAAATTGGATCAAGTGGCTCAAGAGTTGAAAGACTCATATAAGTCATTTGATTCGATTTGGACACATGGCAGATCAAAGTTCATTCAAATGATGATTATTGATGGTTGTTTTATTCTAGAATTTTTGAAAGTCAGTACTCCTCTTGACTATGATCAGAAGGATCCTGTCTTTAGTTTATATGGAAAATTTTATATGATGCAATATATCGAACGTGACATGCTTATGCTTGAGAATCAGATACCTATGACGGTTCTTCATACGTTGATTCAGGTTCAAACTGGCACTGAGGACGATTATCATGAGTGGTTAAATGAGACAATCATAAATTTCTTATTATACCCAATAACATATGAAGATCGAAACTTGGGGAAATGCATGCATATACTGGACGTATACAGAAAATATGTAGTACGAGAACCAAGCCACCCACCCATCTCTAAATCAAAAAAAAGAAGTTTGTCAAGTTTAGAATTAGAAGAATATAATGTCAATCGATCTGCAATGGAGCTTAAAGAGGCTGGAATCAGCTTCAAGAAAAGCGAAACGAGGAGCCTCAGAGATGTTTCCTTCAATCGAGGTGTTCTTAGGCTCCCGCCCTTAATAGTAGTAGACAACACGGAATACATATTCCTTAACCTCATGGCCTTGGAGCGTCTCCACGTAGTTGAAGCCGATAACAAGGTAACATCTTTTGTATGCTTTATGGACACTATCATCGACAGTGCTAAAGATGTTGAAATTCTCATCCGAAGTCATATCCTAATCAACTATCTTGAGAACGATGAAGCTGTAGCCAAATTGTTCAACTCGTTGGCAAAAGAAGCCCCCATGGATTGCAATGGAGAACTTGGAGAAGTGGCGAAGAGTGTGATTTCTTACTGTAGGAAACCGTGGAAAAGATGGCGTGCAAGTCTCATTCACACTTACTTTAAGAATCCATGGGCTATT
Protein sequence

>Msa0739730

MELEMNWFDQINKEIKSNASSIADEKKQWEKHSIYKVPSQVTELNKKAYKPQTISFGPYHHGEDNLKPMEEHKHRALHFLKRCGKPIELIFQKLDQVAQELKDSYKSFDSIWTHGRSKFIQMMIIDGCFILEFLKVSTPLDYDQKDPVFSLYGKFYMMQYIERDMLMLENQIPMTVLHTLIQVQTGTEDDYHEWLNETIINFLLYPITYEDRNLGKCMHILDVYRKYVVREPSHPPISKSKKRSLSSLELEEYNVNRSAMELKEAGISFKKSETRSLRDVSFNRGVLRLPPLIVVDNTEYIFLNLMALERLHVVEADNKVTSFVCFMDTIIDSAKDVEILIRSHILINYLENDEAVAKLFNSLAKEAPMDCNGELGEVAKSVISYCRKPWKRWRASLIHTYFKNPWAI