Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000190 | KEH23151.1 | 98.261 | 115 | 2 | 0 | 1 | 115 | 1 | 115 | 1.52e-71 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0001780 | 0.806496 | 7.996138e-50 | -8.615850e-47 |
| Msa0000190 | Msa0003700 | 0.806435 | 8.236378e-50 | -8.615850e-47 |
| Msa0000190 | Msa0008110 | 0.803917 | 2.772350e-49 | -8.615850e-47 |
| Msa0000190 | Msa0017510 | 0.858292 | 9.103556e-63 | -8.615850e-47 |
| Msa0000190 | Msa0018160 | 0.805054 | 1.606333e-49 | -8.615850e-47 |
| Msa0000190 | Msa0024550 | 0.859750 | 3.333415e-63 | -8.615850e-47 |
| Msa0000190 | Msa0028420 | 0.826921 | 2.080906e-54 | -8.615850e-47 |
| Msa0000190 | Msa0028580 | 0.804316 | 2.289992e-49 | -8.615850e-47 |
| Msa0000190 | Msa0042610 | 0.815400 | 9.427384e-52 | -8.615850e-47 |
| Msa0000190 | Msa0053780 | 0.803845 | 2.870560e-49 | -8.615850e-47 |
| Msa0000190 | Msa0074240 | 0.806898 | 6.577447e-50 | -8.615850e-47 |
| Msa0000190 | Msa0076010 | 0.806423 | 8.287152e-50 | -8.615850e-47 |
| Msa0000190 | Msa0076250 | 0.843908 | 1.048894e-58 | -8.615850e-47 |
| Msa0000190 | Msa0081050 | 0.800346 | 1.504717e-48 | -8.615850e-47 |
| Msa0000190 | Msa0089630 | 0.829150 | 6.047589e-55 | -8.615850e-47 |
| Msa0000190 | Msa0090400 | 0.814865 | 1.239505e-51 | -8.615850e-47 |
| Msa0000190 | Msa0092790 | 0.815544 | 8.756881e-52 | -8.615850e-47 |
| Msa0000190 | Msa0101440 | 0.801032 | 1.090149e-48 | -8.615850e-47 |
| Msa0000190 | Msa0110970 | 0.832101 | 1.145658e-55 | -8.615850e-47 |
| Msa0000190 | Msa0112570 | 0.853371 | 2.497797e-61 | -8.615850e-47 |
| Msa0000190 | Msa0120400 | 0.856561 | 2.959597e-62 | -8.615850e-47 |
| Msa0000190 | Msa0124060 | 0.823625 | 1.252461e-53 | -8.615850e-47 |
| Msa0000190 | Msa0124280 | 0.823252 | 1.531117e-53 | -8.615850e-47 |
| Msa0000190 | Msa0137880 | 0.807534 | 4.823015e-50 | -8.615850e-47 |
| Msa0000190 | Msa0139060 | 0.831734 | 1.411597e-55 | -8.615850e-47 |
| Msa0000190 | Msa0140780 | 0.808049 | 3.748044e-50 | -8.615850e-47 |
| Msa0000190 | Msa0146040 | 0.801981 | 6.967263e-49 | -8.615850e-47 |
| Msa0000190 | Msa0149370 | 0.802357 | 5.830610e-49 | -8.615850e-47 |
| Msa0000190 | Msa0157290 | 0.859507 | 3.943753e-63 | -8.615850e-47 |
| Msa0000190 | Msa0158600 | 0.840098 | 1.067134e-57 | -8.615850e-47 |
| Msa0000190 | Msa0164330 | 0.833715 | 4.548735e-56 | -8.615850e-47 |
| Msa0000190 | Msa0168500 | 0.824496 | 7.823239e-54 | -8.615850e-47 |
| Msa0000190 | Msa0168650 | 0.806964 | 6.368358e-50 | -8.615850e-47 |
| Msa0000190 | Msa0197930 | 0.804986 | 1.660184e-49 | -8.615850e-47 |
| Msa0000190 | Msa0200260 | 0.823856 | 1.105873e-53 | -8.615850e-47 |
| Msa0000190 | Msa0202950 | 0.801119 | 1.046538e-48 | -8.615850e-47 |
| Msa0000190 | Msa0221290 | 0.813261 | 2.799985e-51 | -8.615850e-47 |
| Msa0000190 | Msa0225100 | 0.812117 | 4.981704e-51 | -8.615850e-47 |
| Msa0000190 | Msa0230740 | 0.850158 | 2.034393e-60 | -8.615850e-47 |
| Msa0000190 | Msa0230750 | 0.829535 | 4.876729e-55 | -8.615850e-47 |
| Msa0000190 | Msa0234600 | 0.804141 | 2.490988e-49 | -8.615850e-47 |
| Msa0000190 | Msa0243100 | 0.826481 | 2.649110e-54 | -8.615850e-47 |
| Msa0000190 | Msa0261340 | 0.839914 | 1.191206e-57 | -8.615850e-47 |
| Msa0000190 | Msa0267110 | 0.813657 | 2.290788e-51 | -8.615850e-47 |
| Msa0000190 | Msa0276740 | 0.803354 | 3.628478e-49 | -8.615850e-47 |
| Msa0000190 | Msa0277180 | 0.806761 | 7.029610e-50 | -8.615850e-47 |
| Msa0000190 | Msa0284420 | 0.805961 | 1.036510e-49 | -8.615850e-47 |
| Msa0000190 | Msa0287650 | 0.811604 | 6.441475e-51 | -8.615850e-47 |
| Msa0000190 | Msa0287740 | 0.819039 | 1.431948e-52 | -8.615850e-47 |
| Msa0000190 | Msa0292330 | 0.802314 | 5.950900e-49 | -8.615850e-47 |
| Msa0000190 | Msa0292400 | 0.817612 | 3.012877e-52 | -8.615850e-47 |
| Msa0000190 | Msa0300690 | 0.801981 | 6.965850e-49 | -8.615850e-47 |
| Msa0000190 | Msa0307770 | 0.822102 | 2.834373e-53 | -8.615850e-47 |
| Msa0000190 | Msa0311280 | 0.801216 | 9.997372e-49 | -8.615850e-47 |
| Msa0000190 | Msa0316810 | 0.809062 | 2.277797e-50 | -8.615850e-47 |
| Msa0000190 | Msa0338510 | 0.819211 | 1.308297e-52 | -8.615850e-47 |
| Msa0000190 | Msa0344570 | 0.833298 | 5.777772e-56 | -8.615850e-47 |
| Msa0000190 | Msa0348880 | 0.817519 | 3.161751e-52 | -8.615850e-47 |
| Msa0000190 | Msa0357340 | 0.826989 | 2.003447e-54 | -8.615850e-47 |
| Msa0000190 | Msa0359250 | 0.801597 | 8.354803e-49 | -8.615850e-47 |
| Msa0000190 | Msa0363070 | 0.838470 | 2.821974e-57 | -8.615850e-47 |
| Msa0000190 | Msa0363200 | 0.830373 | 3.045940e-55 | -8.615850e-47 |
| Msa0000190 | Msa0378720 | 0.803915 | 2.775173e-49 | -8.615850e-47 |
| Msa0000190 | Msa0392420 | 0.850092 | 2.123352e-60 | -8.615850e-47 |
| Msa0000190 | Msa0392460 | 0.847105 | 1.426978e-59 | -8.615850e-47 |
| Msa0000190 | Msa0392490 | 0.852010 | 6.109627e-61 | -8.615850e-47 |
| Msa0000190 | Msa0392510 | 0.832053 | 1.177462e-55 | -8.615850e-47 |
| Msa0000190 | Msa0406120 | 0.802399 | 5.715499e-49 | -8.615850e-47 |
| Msa0000190 | Msa0410650 | 0.808820 | 2.566764e-50 | -8.615850e-47 |
| Msa0000190 | Msa0415320 | 0.811469 | 6.892639e-51 | -8.615850e-47 |
| Msa0000190 | Msa0418190 | 0.803125 | 4.046539e-49 | -8.615850e-47 |
| Msa0000190 | Msa0419700 | 0.818191 | 2.229615e-52 | -8.615850e-47 |
| Msa0000190 | Msa0422850 | 0.805460 | 1.320724e-49 | -8.615850e-47 |
| Msa0000190 | Msa0422930 | 0.808477 | 3.037769e-50 | -8.615850e-47 |
| Msa0000190 | Msa0440500 | 0.815129 | 1.082874e-51 | -8.615850e-47 |
| Msa0000190 | Msa0443310 | 0.802659 | 5.051313e-49 | -8.615850e-47 |
| Msa0000190 | Msa0450440 | 0.802208 | 6.256174e-49 | -8.615850e-47 |
| Msa0000190 | Msa0450720 | 0.824236 | 9.003737e-54 | -8.615850e-47 |
| Msa0000190 | Msa0451400 | 0.801900 | 7.238436e-49 | -8.615850e-47 |
| Msa0000190 | Msa0464680 | 0.804631 | 1.968585e-49 | -8.615850e-47 |
| Msa0000190 | Msa0465910 | 0.813312 | 2.727464e-51 | -8.615850e-47 |
| Msa0000190 | Msa0467430 | 0.800296 | 1.540394e-48 | -8.615850e-47 |
| Msa0000190 | Msa0467490 | 0.807172 | 5.754688e-50 | -8.615850e-47 |
| Msa0000190 | Msa0487570 | 0.853755 | 1.937936e-61 | -8.615850e-47 |
| Msa0000190 | Msa0487630 | 0.858750 | 6.647772e-63 | -8.615850e-47 |
| Msa0000190 | Msa0498060 | 0.823397 | 1.416086e-53 | -8.615850e-47 |
| Msa0000190 | Msa0503580 | 0.801887 | 7.282294e-49 | -8.615850e-47 |
| Msa0000190 | Msa0507680 | 0.805467 | 1.316104e-49 | -8.615850e-47 |
| Msa0000190 | Msa0511750 | 0.812577 | 3.952486e-51 | -8.615850e-47 |
| Msa0000190 | Msa0523000 | 0.802616 | 5.155989e-49 | -8.615850e-47 |
| Msa0000190 | Msa0524190 | 0.806756 | 7.048791e-50 | -8.615850e-47 |
| Msa0000190 | Msa0530540 | 0.809652 | 1.701818e-50 | -8.615850e-47 |
| Msa0000190 | Msa0530780 | 0.806810 | 6.864182e-50 | -8.615850e-47 |
| Msa0000190 | Msa0534930 | 0.817765 | 2.782050e-52 | -8.615850e-47 |
| Msa0000190 | Msa0535040 | 0.837921 | 3.906677e-57 | -8.615850e-47 |
| Msa0000190 | Msa0547230 | 0.814969 | 1.175122e-51 | -8.615850e-47 |
| Msa0000190 | Msa0574890 | 0.810308 | 1.229757e-50 | -8.615850e-47 |
| Msa0000190 | Msa0587620 | 0.803130 | 4.036628e-49 | -8.615850e-47 |
| Msa0000190 | Msa0591790 | 0.815243 | 1.021279e-51 | -8.615850e-47 |
| Msa0000190 | Msa0602250 | 0.803224 | 3.861194e-49 | -8.615850e-47 |
| Msa0000190 | Msa0626450 | 0.807705 | 4.435625e-50 | -8.615850e-47 |
| Msa0000190 | Msa0626490 | 0.806472 | 8.092533e-50 | -8.615850e-47 |
| Msa0000190 | Msa0637560 | 0.800802 | 1.214591e-48 | -8.615850e-47 |
| Msa0000190 | Msa0641290 | 0.807513 | 4.872162e-50 | -8.615850e-47 |
| Msa0000190 | Msa0643080 | 0.808054 | 3.739870e-50 | -8.615850e-47 |
| Msa0000190 | Msa0664600 | 0.803875 | 2.828743e-49 | -8.615850e-47 |
| Msa0000190 | Msa0669320 | 0.813120 | 3.006370e-51 | -8.615850e-47 |
| Msa0000190 | Msa0682050 | 0.800564 | 1.358481e-48 | -8.615850e-47 |
| Msa0000190 | Msa0682620 | 0.805604 | 1.231984e-49 | -8.615850e-47 |
| Msa0000190 | Msa0683570 | 0.816378 | 5.702319e-52 | -8.615850e-47 |
| Msa0000190 | Msa0688770 | 0.803870 | 2.835342e-49 | -8.615850e-47 |
| Msa0000190 | Msa0689520 | 0.807882 | 4.067429e-50 | -8.615850e-47 |
| Msa0000190 | Msa0710800 | 0.812018 | 5.235329e-51 | -8.615850e-47 |
| Msa0000190 | Msa0722780 | 0.819476 | 1.138682e-52 | -8.615850e-47 |
| Msa0000190 | Msa0722850 | 0.805629 | 1.217234e-49 | -8.615850e-47 |
| Msa0000190 | Msa0723000 | 0.821482 | 3.944620e-53 | -8.615850e-47 |
| Msa0000190 | Msa0723050 | 0.822515 | 2.273747e-53 | -8.615850e-47 |
| Msa0000190 | Msa0727930 | 0.815925 | 7.200011e-52 | -8.615850e-47 |
| Msa0000190 | Msa0730430 | 0.814601 | 1.418006e-51 | -8.615850e-47 |
| Msa0000190 | Msa0739730 | 0.813291 | 2.757750e-51 | -8.615850e-47 |
| Msa0000190 | Msa0741240 | 0.820950 | 5.232024e-53 | -8.615850e-47 |
| Msa0000190 | Msa0743890 | 0.820059 | 8.378130e-53 | -8.615850e-47 |
| Msa0000190 | Msa0754520 | 0.812570 | 3.966442e-51 | -8.615850e-47 |
| Msa0000190 | Msa0769180 | 0.880440 | 5.481901e-70 | -8.615850e-47 |
| Msa0000190 | Msa0770720 | 0.804966 | 1.676318e-49 | -8.615850e-47 |
| Msa0000190 | Msa0786500 | 0.810733 | 9.953044e-51 | -8.615850e-47 |
| Msa0000190 | Msa0789830 | 0.801083 | 1.064237e-48 | -8.615850e-47 |
| Msa0000190 | Msa0794810 | 0.802856 | 4.598811e-49 | -8.615850e-47 |
| Msa0000190 | Msa0811960 | 0.812445 | 4.225500e-51 | -8.615850e-47 |
| Msa0000190 | Msa0816150 | 0.831731 | 1.413913e-55 | -8.615850e-47 |
| Msa0000190 | Msa0822870 | 0.830668 | 2.579518e-55 | -8.615850e-47 |
| Msa0000190 | Msa0824840 | 0.808390 | 3.170711e-50 | -8.615850e-47 |
| Msa0000190 | Msa0828560 | 0.831996 | 1.215901e-55 | -8.615850e-47 |
| Msa0000190 | Msa0833220 | 0.818201 | 2.217548e-52 | -8.615850e-47 |
| Msa0000190 | Msa0834770 | 0.800418 | 1.454614e-48 | -8.615850e-47 |
| Msa0000190 | Msa0838580 | 0.804388 | 2.212571e-49 | -8.615850e-47 |
| Msa0000190 | Msa0843220 | 0.831524 | 1.589522e-55 | -8.615850e-47 |
| Msa0000190 | Msa0847540 | 0.804402 | 2.197862e-49 | -8.615850e-47 |
| Msa0000190 | Msa0853660 | 0.815737 | 7.931215e-52 | -8.615850e-47 |
| Msa0000190 | Msa0861600 | 0.800614 | 1.326843e-48 | -8.615850e-47 |
| Msa0000190 | Msa0861870 | 0.827475 | 1.532880e-54 | -8.615850e-47 |
| Msa0000190 | Msa0866270 | 0.825633 | 4.215277e-54 | -8.615850e-47 |
| Msa0000190 | Msa0870640 | 0.828377 | 9.299028e-55 | -8.615850e-47 |
| Msa0000190 | Msa0876190 | 0.802068 | 6.684748e-49 | -8.615850e-47 |
| Msa0000190 | Msa0876550 | 0.811847 | 5.704720e-51 | -8.615850e-47 |
| Msa0000190 | Msa0876560 | 0.834143 | 3.554010e-56 | -8.615850e-47 |
| Msa0000190 | Msa0880140 | 0.854118 | 1.522735e-61 | -8.615850e-47 |
| Msa0000190 | Msa0880780 | 0.801684 | 8.018084e-49 | -8.615850e-47 |
| Msa0000190 | Msa0883060 | 0.800529 | 1.380838e-48 | -8.615850e-47 |
| Msa0000190 | Msa0890320 | 0.828618 | 8.135964e-55 | -8.615850e-47 |
| Msa0000190 | Msa0896540 | 0.824387 | 8.298153e-54 | -8.615850e-47 |
| Msa0000190 | Msa0896970 | 0.810341 | 1.209644e-50 | -8.615850e-47 |
| Msa0000190 | Msa0906130 | 0.806889 | 6.606891e-50 | -8.615850e-47 |
| Msa0000190 | Msa0909140 | 0.824844 | 6.476842e-54 | -8.615850e-47 |
| Msa0000190 | Msa0910430 | 0.802593 | 5.213146e-49 | -8.615850e-47 |
| Msa0000190 | Msa0925180 | 0.858334 | 8.847119e-63 | -8.615850e-47 |
| Msa0000190 | Msa0936410 | 0.825356 | 4.901524e-54 | -8.615850e-47 |
| Msa0000190 | Msa0941350 | 0.826217 | 3.061774e-54 | -8.615850e-47 |
| Msa0000190 | Msa0941820 | 0.805681 | 1.187279e-49 | -8.615850e-47 |
| Msa0000190 | Msa0945110 | 0.827047 | 1.941154e-54 | -8.615850e-47 |
| Msa0000190 | Msa0948290 | 0.827015 | 1.975653e-54 | -8.615850e-47 |
| Msa0000190 | Msa0964840 | 0.804212 | 2.408055e-49 | -8.615850e-47 |
| Msa0000190 | Msa0967380 | 0.851899 | 6.567865e-61 | -8.615850e-47 |
| Msa0000190 | Msa0967870 | 0.821145 | 4.718541e-53 | -8.615850e-47 |
| Msa0000190 | Msa0972100 | 0.811827 | 5.763065e-51 | -8.615850e-47 |
| Msa0000190 | Msa0972670 | 0.806731 | 7.134487e-50 | -8.615850e-47 |
| Msa0000190 | Msa0973250 | 0.808501 | 3.003363e-50 | -8.615850e-47 |
| Msa0000190 | Msa0981950 | 0.807348 | 5.281081e-50 | -8.615850e-47 |
| Msa0000190 | Msa0990540 | 0.838285 | 3.150035e-57 | -8.615850e-47 |
| Msa0000190 | Msa1005870 | 0.832581 | 8.712184e-56 | -8.615850e-47 |
| Msa0000190 | Msa1019430 | 0.843787 | 1.130350e-58 | -8.615850e-47 |
| Msa0000190 | Msa1019470 | 0.838208 | 3.295734e-57 | -8.615850e-47 |
| Msa0000190 | Msa1020510 | 0.803553 | 3.299110e-49 | -8.615850e-47 |
| Msa0000190 | Msa1020670 | 0.825921 | 3.600284e-54 | -8.615850e-47 |
| Msa0000190 | Msa1021570 | 0.866292 | 3.172882e-65 | -8.615850e-47 |
| Msa0000190 | Msa1043370 | 0.832741 | 7.949483e-56 | -8.615850e-47 |
| Msa0000190 | Msa1045140 | 0.815561 | 8.680018e-52 | -8.615850e-47 |
| Msa0000190 | Msa1047980 | 0.836784 | 7.638193e-57 | -8.615850e-47 |
| Msa0000190 | Msa1051830 | 0.820750 | 5.816104e-53 | -8.615850e-47 |
| Msa0000190 | Msa1060310 | 0.837764 | 4.288199e-57 | -8.615850e-47 |
| Msa0000190 | Msa1080240 | 0.801530 | 8.622403e-49 | -8.615850e-47 |
| Msa0000190 | Msa1085200 | 0.807450 | 5.025496e-50 | -8.615850e-47 |
| Msa0000190 | Msa1092010 | 0.832691 | 8.181859e-56 | -8.615850e-47 |
| Msa0000190 | Msa1096970 | 0.814823 | 1.265844e-51 | -8.615850e-47 |
| Msa0000190 | Msa1123380 | 0.813799 | 2.131600e-51 | -8.615850e-47 |
| Msa0000190 | Msa1125000 | 0.821604 | 3.696447e-53 | -8.615850e-47 |
| Msa0000190 | Msa1135390 | 0.813645 | 2.305360e-51 | -8.615850e-47 |
| Msa0000190 | Msa1140210 | 0.836551 | 8.757421e-57 | -8.615850e-47 |
| Msa0000190 | Msa1148940 | 0.823974 | 1.037305e-53 | -8.615850e-47 |
| Msa0000190 | Msa1151910 | 0.809087 | 2.250279e-50 | -8.615850e-47 |
| Msa0000190 | Msa1167280 | 0.801624 | 8.246240e-49 | -8.615850e-47 |
| Msa0000190 | Msa1192090 | 0.802564 | 5.285121e-49 | -8.615850e-47 |
| Msa0000190 | Msa1196440 | 0.810245 | 1.268507e-50 | -8.615850e-47 |
| Msa0000190 | Msa1209460 | 0.810224 | 1.282024e-50 | -8.615850e-47 |
| Msa0000190 | Msa1218550 | 0.800114 | 1.677639e-48 | -8.615850e-47 |
| Msa0000190 | Msa1223470 | 0.827520 | 1.495226e-54 | -8.615850e-47 |
| Msa0000190 | Msa1225250 | 0.801718 | 7.888060e-49 | -8.615850e-47 |
| Msa0000190 | Msa1228190 | 0.815869 | 7.412474e-52 | -8.615850e-47 |
| Msa0000190 | Msa1229500 | 0.805455 | 1.324268e-49 | -8.615850e-47 |
| Msa0000190 | Msa1236410 | 0.822251 | 2.617932e-53 | -8.615850e-47 |
| Msa0000190 | Msa1242230 | 0.804263 | 2.349852e-49 | -8.615850e-47 |
| Msa0000190 | Msa1269480 | 0.804533 | 2.064153e-49 | -8.615850e-47 |
| Msa0000190 | Msa1271990 | 0.806164 | 9.397551e-50 | -8.615850e-47 |
| Msa0000190 | Msa1293730 | 0.809075 | 2.263367e-50 | -8.615850e-47 |
| Msa0000190 | Msa1293770 | 0.803744 | 3.012450e-49 | -8.615850e-47 |
| Msa0000190 | Msa1326630 | 0.807443 | 5.041263e-50 | -8.615850e-47 |
| Msa0000190 | Msa1357240 | 0.818802 | 1.621012e-52 | -8.615850e-47 |
| Msa0000190 | Msa1358450 | 0.808236 | 3.419257e-50 | -8.615850e-47 |
| Msa0000190 | Msa1365060 | 0.800190 | 1.618860e-48 | -8.615850e-47 |
| Msa0000190 | Msa1366340 | 0.821699 | 3.513453e-53 | -8.615850e-47 |
| Msa0000190 | Msa1367370 | 0.801991 | 6.933294e-49 | -8.615850e-47 |
| Msa0000190 | Msa1369550 | 0.803894 | 2.803324e-49 | -8.615850e-47 |
| Msa0000190 | Msa1372230 | 0.806670 | 7.348935e-50 | -8.615850e-47 |
| Msa0000190 | Msa1373650 | 0.809168 | 2.161848e-50 | -8.615850e-47 |
| Msa0000190 | Msa1374040 | 0.804279 | 2.331692e-49 | -8.615850e-47 |
| Msa0000190 | Msa1374550 | 0.885804 | 5.927740e-72 | -8.615850e-47 |
| Msa0000190 | Msa1421550 | 0.806383 | 8.449401e-50 | -8.615850e-47 |
| Msa0000190 | Msa1423460 | 0.800325 | 1.519614e-48 | -8.615850e-47 |
| Msa0000190 | Msa1436570 | 0.801048 | 1.082000e-48 | -8.615850e-47 |
| Msa0000190 | Msa1438250 | 0.860104 | 2.606548e-63 | -8.615850e-47 |
| Msa0000190 | Msa1440960 | 0.800749 | 1.245334e-48 | -8.615850e-47 |
| Msa0000190 | Msa1443110 | 0.808164 | 3.543806e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000190 | MtrunA17_Chr7g0241821 | 98.261 | 115 | 2 | 0 | 1 | 115 | 1 | 115 | 1.40e-75 | 219 |
| Msa0000190 | MtrunA17_Chr2g0282121 | 54.098 | 122 | 43 | 3 | 4 | 114 | 4 | 123 | 2.15e-23 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAATCTTGATTGCTCTT+TGG | 0.335761 | 1_1:-1025489 | None:intergenic |
| TCTTACATTCTTCTTCATCT+AGG | 0.348003 | 1_1:+1025690 | Msa0000190:CDS |
| GTTGGTATGTCATTGACATT+AGG | 0.356920 | 1_1:-1025419 | None:intergenic |
| GGTTTCTTCTTCATCTACTT+TGG | 0.392407 | 1_1:+1025598 | Msa0000190:CDS |
| AAATGTCCATTAAAAGCAAA+AGG | 0.418577 | 1_1:+1025384 | None:intergenic |
| CTTACATTCTTCTTCATCTA+GGG | 0.436392 | 1_1:+1025691 | Msa0000190:CDS |
| CTTCTTCATCTACTTTGGTA+AGG | 0.453056 | 1_1:+1025603 | Msa0000190:CDS |
| TTGAAATTCCTAGTGCAACT+AGG | 0.484774 | 1_1:+1025518 | Msa0000190:CDS |
| AACTCAACTCAACTGAAACT+TGG | 0.493461 | 1_1:-1025719 | None:intergenic |
| AGTTTCAGCTCGATGTGAAT+CGG | 0.520615 | 1_1:-1025648 | None:intergenic |
| AATGTCCATTAAAAGCAAAA+GGG | 0.546646 | 1_1:+1025385 | None:intergenic |
| CTATGAAAAGAAGATCCTCT+AGG | 0.575974 | 1_1:+1025573 | Msa0000190:CDS |
| TACTTTGGTAAGGTCGCGAT+CGG | 0.577817 | 1_1:+1025613 | Msa0000190:CDS |
| AGTTGCACTAGGAATTTCAA+AGG | 0.597401 | 1_1:-1025515 | None:intergenic |
| AAGAAGAGGGAAATTGAAAG+TGG | 0.598757 | 1_1:+1025452 | Msa0000190:CDS |
| GAAAAGAAGATCCTCTAGGA+AGG | 0.606833 | 1_1:+1025577 | Msa0000190:CDS |
| AGTGCAACTAGGAACAAAAG+TGG | 0.620566 | 1_1:+1025529 | Msa0000190:CDS |
| CAGCTCGATGTGAATCGGTG+AGG | 0.671793 | 1_1:-1025643 | None:intergenic |
| TGAAGAAGAAACCTTCCTAG+AGG | 0.674397 | 1_1:-1025588 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATTTTTTCTCAAGAAGA+GGG | + | chr1_1:1025439-1025458 | Msa0000190:CDS | 25.0% |
| CTCTTCTTGAGAAAAAATGT+TGG | - | chr1_1:1025440-1025459 | None:intergenic | 30.0% | |
| !!! | CAACATTTTTTCTCAAGAAG+AGG | + | chr1_1:1025438-1025457 | Msa0000190:CDS | 30.0% |
| TCTTACATTCTTCTTCATCT+AGG | + | chr1_1:1025690-1025709 | Msa0000190:CDS | 30.0% | |
| CTTACATTCTTCTTCATCTA+GGG | + | chr1_1:1025691-1025710 | Msa0000190:CDS | 30.0% | |
| !! | GCATACCCTTTTGCTTTTAA+TGG | - | chr1_1:1025393-1025412 | None:intergenic | 35.0% |
| GTTGGTATGTCATTGACATT+AGG | - | chr1_1:1025422-1025441 | None:intergenic | 35.0% | |
| AAGAAGAGGGAAATTGAAAG+TGG | + | chr1_1:1025452-1025471 | Msa0000190:CDS | 35.0% | |
| TGACAATCTTGATTGCTCTT+TGG | - | chr1_1:1025492-1025511 | None:intergenic | 35.0% | |
| AGTTGCACTAGGAATTTCAA+AGG | - | chr1_1:1025518-1025537 | None:intergenic | 35.0% | |
| TTGAAATTCCTAGTGCAACT+AGG | + | chr1_1:1025518-1025537 | Msa0000190:CDS | 35.0% | |
| CTATGAAAAGAAGATCCTCT+AGG | + | chr1_1:1025573-1025592 | Msa0000190:CDS | 35.0% | |
| GGTTTCTTCTTCATCTACTT+TGG | + | chr1_1:1025598-1025617 | Msa0000190:CDS | 35.0% | |
| CTTCTTCATCTACTTTGGTA+AGG | + | chr1_1:1025603-1025622 | Msa0000190:CDS | 35.0% | |
| ! | CTTTTGTTCCTAGTTGCACT+AGG | - | chr1_1:1025529-1025548 | None:intergenic | 40.0% |
| AGTGCAACTAGGAACAAAAG+TGG | + | chr1_1:1025529-1025548 | Msa0000190:CDS | 40.0% | |
| ! | GAAAAGAAGATCCTCTAGGA+AGG | + | chr1_1:1025577-1025596 | Msa0000190:CDS | 40.0% |
| TGAAGAAGAAACCTTCCTAG+AGG | - | chr1_1:1025591-1025610 | None:intergenic | 40.0% | |
| AGTTTCAGCTCGATGTGAAT+CGG | - | chr1_1:1025651-1025670 | None:intergenic | 40.0% | |
| TACTTTGGTAAGGTCGCGAT+CGG | + | chr1_1:1025613-1025632 | Msa0000190:CDS | 45.0% | |
| CAGCTCGATGTGAATCGGTG+AGG | - | chr1_1:1025646-1025665 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 1025386 | 1025733 | 1025386 | ID=Msa0000190;Name=Msa0000190 |
| chr1_1 | mRNA | 1025386 | 1025733 | 1025386 | ID=Msa0000190-mRNA-1;Parent=Msa0000190;Name=Msa0000190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|115 |
| chr1_1 | exon | 1025386 | 1025733 | 1025386 | ID=Msa0000190-mRNA-1:exon:101;Parent=Msa0000190-mRNA-1 |
| chr1_1 | CDS | 1025386 | 1025733 | 1025386 | ID=Msa0000190-mRNA-1:cds;Parent=Msa0000190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
