AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523000 MtrunA17_Chr3g0142921 82.682 358 11 1 1 307 1 358 0.0 587
Msa0523000 MtrunA17_Chr1g0156891 62.751 349 76 2 9 306 19 364 1.07e-156 442
Msa0523000 MtrunA17_Chr1g0156901 58.310 355 96 2 3 306 17 370 6.54e-146 415
Msa0523000 MtrunA17_Chr1g0156911 59.155 355 90 3 3 306 7 357 1.47e-142 406
Msa0523000 MtrunA17_Chr1g0156931 54.342 357 107 4 1 306 9 360 1.58e-135 388
Msa0523000 MtrunA17_Chr1g0156921 55.650 354 101 4 5 306 14 363 1.38e-133 383
Msa0523000 MtrunA17_Chr3g0142941 55.556 342 97 3 16 306 30 367 1.02e-130 376
Msa0523000 MtrunA17_Chr8g0371491 46.197 355 136 4 5 307 7 358 7.06e-106 313
Msa0523000 MtrunA17_Chr5g0405821 48.348 333 119 3 28 307 35 367 1.02e-105 312
Msa0523000 MtrunA17_Chr8g0371471 45.994 337 127 4 24 306 27 362 1.16e-103 307
Msa0523000 MtrunA17_Chr8g0371481 45.266 338 129 5 24 306 27 363 6.09e-102 303
Msa0523000 MtrunA17_Chr5g0405831 45.345 333 128 4 28 307 35 366 3.05e-100 298
Msa0523000 MtrunA17_Chr6g0463261 95.902 122 5 0 89 210 3 124 1.75e-79 237
Msa0523000 MtrunA17_Chr1g0157001 39.809 314 134 5 41 302 41 351 1.16e-75 236
Msa0523000 MtrunA17_Chr5g0438621 37.037 324 151 4 35 306 29 351 5.14e-74 231
Msa0523000 MtrunA17_Chr5g0438631 37.003 327 148 7 35 306 27 350 1.57e-73 230
Msa0523000 MtrunA17_Chr3g0105401 37.846 325 148 6 35 306 27 350 3.72e-72 226
Msa0523000 MtrunA17_Chr3g0120861 35.692 325 156 4 35 307 37 360 1.08e-67 215
Msa0523000 MtrunA17_Chr5g0438641 34.366 355 162 6 1 303 10 345 4.51e-66 211
Msa0523000 MtrunA17_Chr4g0046151 34.483 319 149 4 36 295 36 353 1.30e-65 210
Msa0523000 MtrunA17_Chr2g0320671 35.331 317 152 4 35 299 29 344 4.58e-65 208
Msa0523000 MtrunA17_Chr8g0341001 35.174 344 164 5 9 299 10 347 1.09e-63 204
Msa0523000 MtrunA17_Chr5g0432101 34.637 358 162 6 6 304 5 349 3.48e-62 201
Msa0523000 MtrunA17_Chr2g0330781 36.478 318 148 5 35 299 30 346 4.46e-62 200
Msa0523000 MtrunA17_Chr2g0283191 41.935 217 119 4 35 245 37 252 5.71e-52 175
Msa0523000 MtrunA17_Chr4g0027521 33.762 311 150 5 35 290 26 335 2.35e-51 172
Msa0523000 MtrunA17_Chr5g0437421 43.939 198 109 2 35 232 31 226 6.68e-48 164
Msa0523000 MtrunA17_Chr7g0275021 30.641 359 179 10 4 304 10 356 1.62e-42 150
Msa0523000 MtrunA17_Chr7g0275011 31.776 321 164 8 32 299 30 348 3.79e-42 149
Msa0523000 MtrunA17_Chr1g0189891 30.671 313 165 7 36 299 29 338 4.88e-42 148
Msa0523000 MtrunA17_Chr3g0131321 29.240 342 184 8 5 290 3 342 1.57e-41 147
Msa0523000 MtrunA17_Chr4g0017431 30.968 310 157 7 35 290 30 336 6.27e-41 145
Msa0523000 MtrunA17_Chr3g0077571 30.619 307 157 8 35 290 29 330 1.74e-39 142
Msa0523000 MtrunA17_Chr1g0182811 31.494 308 154 6 36 288 33 338 1.18e-38 140
Msa0523000 MtrunA17_Chr8g0380041 29.032 310 160 8 35 289 30 334 5.54e-38 138
Msa0523000 MtrunA17_Chr2g0285061 29.032 310 161 8 35 289 31 336 6.07e-38 138
Msa0523000 MtrunA17_Chr8g0374101 27.548 363 194 9 3 303 10 365 7.51e-38 138
Msa0523000 MtrunA17_Chr6g0457921 30.124 322 168 9 33 299 25 344 9.79e-38 137
Msa0523000 MtrunA17_Chr7g0274991 28.701 331 178 6 30 304 27 355 1.56e-37 137
Msa0523000 MtrunA17_Chr1g0189901 31.068 309 156 8 36 290 31 336 1.97e-37 136
Msa0523000 MtrunA17_Chr4g0060811 27.187 320 174 7 38 302 29 344 1.69e-36 134
Msa0523000 MtrunA17_Chr7g0229591 35.238 210 126 3 1 210 4 203 2.23e-36 129
Msa0523000 MtrunA17_Chr5g0396511 27.778 306 166 6 38 290 48 351 3.61e-36 133
Msa0523000 MtrunA17_Chr7g0275001 29.688 320 167 7 36 300 25 341 4.60e-36 132
Msa0523000 MtrunA17_Chr3g0092131 27.812 320 172 7 38 302 25 340 1.12e-35 132
Msa0523000 MtrunA17_Chr2g0294301 30.841 321 158 9 36 296 35 351 3.94e-35 130
Msa0523000 MtrunA17_Chr8g0380031 35.981 214 130 5 35 245 83 292 5.96e-35 130
Msa0523000 MtrunA17_Chr2g0284921 28.483 323 167 9 35 299 33 349 7.38e-35 129
Msa0523000 MtrunA17_Chr3g0099161 29.467 319 168 6 35 298 91 407 1.20e-34 130
Msa0523000 MtrunA17_Chr1g0189931 29.968 317 167 7 36 299 32 346 2.41e-34 128
Msa0523000 MtrunA17_Chr5g0444401 28.779 344 176 10 3 290 5 335 3.34e-34 127
Msa0523000 MtrunA17_Chr8g0344941 28.261 322 157 10 36 294 41 351 3.53e-33 125
Msa0523000 MtrunA17_Chr4g0008851 26.796 362 192 10 3 306 12 358 5.65e-33 124
Msa0523000 MtrunA17_Chr3g0099151 29.167 312 163 7 35 290 86 395 6.33e-33 125
Msa0523000 MtrunA17_Chr7g0215961 29.085 306 149 8 36 288 33 323 7.88e-33 124
Msa0523000 MtrunA17_Chr3g0086641 33.191 235 138 9 1 232 15 233 1.31e-32 124
Msa0523000 MtrunA17_Chr3g0085881 28.808 302 161 10 35 290 32 325 6.13e-32 121
Msa0523000 MtrunA17_Chr4g0068441 30.671 313 157 10 33 289 32 340 9.34e-32 121
Msa0523000 MtrunA17_Chr2g0285001 31.046 306 154 9 35 289 32 331 9.77e-32 121
Msa0523000 MtrunA17_Chr2g0284941 31.707 287 159 9 35 291 32 311 4.13e-31 119
Msa0523000 MtrunA17_Chr5g0434621 28.025 314 163 7 37 294 26 332 6.03e-31 119
Msa0523000 MtrunA17_Chr8g0370951 29.653 317 159 8 32 288 27 339 3.33e-30 117
Msa0523000 MtrunA17_Chr4g0027571 29.108 213 99 2 139 299 2 214 7.09e-30 113
Msa0523000 MtrunA17_Chr2g0301641 30.337 267 167 6 7 267 9 262 1.27e-29 116
Msa0523000 MtrunA17_Chr2g0284991 30.065 306 156 10 35 289 32 330 1.38e-29 115
Msa0523000 MtrunA17_Chr8g0344931 28.035 346 181 10 1 290 1 334 1.09e-28 113
Msa0523000 MtrunA17_Chr3g0077581 32.420 219 135 8 29 240 29 241 1.87e-28 112
Msa0523000 MtrunA17_Chr5g0420811 37.387 222 115 9 23 232 12 221 2.42e-28 112
Msa0523000 MtrunA17_Chr2g0294311 35.780 218 118 8 35 237 31 241 3.05e-28 112
Msa0523000 MtrunA17_Chr2g0284951 35.644 202 122 6 35 232 32 229 5.80e-28 111
Msa0523000 MtrunA17_Chr6g0469511 46.429 112 59 1 35 146 29 139 2.91e-27 103
Msa0523000 MtrunA17_Chr3g0099231 35.238 210 122 5 35 235 27 231 4.86e-27 108
Msa0523000 MtrunA17_Chr3g0085231 35.644 202 122 7 35 232 30 227 1.98e-26 106
Msa0523000 MtrunA17_Chr8g0349321 32.636 239 145 9 5 242 10 233 2.32e-26 106
Msa0523000 MtrunA17_Chr4g0027561 44.186 129 62 3 1 129 4 122 5.87e-26 100
Msa0523000 MtrunA17_Chr8g0349301 31.799 239 146 10 5 242 10 232 1.12e-25 104
Msa0523000 MtrunA17_Chr8g0370981 33.790 219 123 8 35 240 43 252 5.40e-25 103
Msa0523000 MtrunA17_Chr8g0349341 27.835 291 189 10 5 292 10 282 2.02e-24 101
Msa0523000 MtrunA17_Chr7g0229581 33.333 141 42 2 211 299 7 147 3.57e-19 82.8
Msa0523000 MtrunA17_Chr1g0198351 32.751 229 128 10 5 233 17 219 1.82e-17 81.6
Msa0523000 MtrunA17_Chr2g0321991 44.545 110 50 5 23 123 12 119 2.30e-16 74.3
Msa0523000 MtrunA17_Chr7g0254461 28.226 248 149 10 33 267 40 271 4.42e-16 78.2
Msa0523000 MtrunA17_Chr6g0455661 50.000 92 41 4 35 126 30 116 8.99e-16 77.4
Msa0523000 MtrunA17_Chr8g0370961 25.871 201 97 4 140 290 20 218 1.02e-15 75.1
Msa0523000 MtrunA17_Chr8g0349331 27.848 237 123 8 5 240 10 199 1.55e-15 75.9
Msa0523000 MtrunA17_Chr3g0112821 34.286 210 113 11 32 230 26 221 1.67e-15 76.3
Msa0523000 MtrunA17_Chr1g0198381 32.995 197 110 8 37 232 3 178 2.09e-15 75.5
Msa0523000 MtrunA17_Chr1g0189921 47.727 88 44 2 36 123 31 116 5.21e-15 71.2
Msa0523000 MtrunA17_Chr7g0273101 25.869 259 164 9 31 274 24 269 1.03e-14 73.9
Msa0523000 MtrunA17_Chr1g0191461 27.966 236 143 11 31 256 26 244 3.51e-14 72.4
Msa0523000 MtrunA17_Chr4g0018561 44.828 87 38 3 1 87 4 80 4.17e-14 67.4
Msa0523000 MtrunA17_Chr1g0178931 30.288 208 126 8 37 243 38 227 5.09e-14 71.6
Msa0523000 MtrunA17_Chr1g0160031 30.131 229 127 9 23 232 21 235 5.49e-14 71.6
Msa0523000 MtrunA17_Chr6g0450731 28.436 211 123 8 34 233 31 224 5.55e-14 71.6
Msa0523000 MtrunA17_Chr3g0104801 36.735 147 71 7 34 169 42 177 2.01e-13 67.4
Msa0523000 MtrunA17_Chr2g0283481 27.402 281 179 11 33 302 44 310 2.84e-13 69.7
Msa0523000 MtrunA17_Chr8g0381581 26.050 238 147 8 14 233 11 237 3.32e-13 69.7
Msa0523000 MtrunA17_Chr2g0317261 27.798 277 169 11 32 292 26 287 5.77e-13 68.6
Msa0523000 MtrunA17_Chr2g0301581 32.189 233 134 10 31 253 29 247 6.34e-13 68.6
Msa0523000 MtrunA17_Chr2g0317271 27.798 277 169 11 32 292 26 287 7.29e-13 68.2
Msa0523000 MtrunA17_Chr5g0432081 48.276 58 25 1 246 303 11 63 7.36e-13 63.2
Msa0523000 MtrunA17_Chr1g0178941 31.000 200 119 8 37 232 41 225 9.20e-13 68.2
Msa0523000 MtrunA17_Chr0c01g0489571 30.667 225 133 9 32 246 26 237 1.62e-12 67.4
Msa0523000 MtrunA17_Chr0c01g0489581 30.667 225 133 9 32 246 26 237 1.87e-12 67.0
Msa0523000 MtrunA17_Chr2g0301541 27.536 276 172 10 31 291 29 291 2.78e-12 66.6
Msa0523000 MtrunA17_Chr4g0027531 43.836 73 32 2 1 73 4 67 6.54e-12 60.1
Msa0523000 MtrunA17_Chr2g0301591 30.568 229 123 10 34 253 32 233 3.20e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523000 AT1G75900.1 47.701 348 126 5 11 306 20 363 5.52e-108 318
Msa0523000 AT1G75890.2 45.272 349 136 3 7 303 21 366 9.76e-105 310
Msa0523000 AT1G75890.3 45.272 349 136 3 7 303 50 395 1.52e-104 311
Msa0523000 AT1G75890.1 43.646 362 136 4 7 303 21 379 5.10e-101 301
Msa0523000 AT1G75880.2 45.506 356 139 4 4 307 22 374 7.50e-101 301
Msa0523000 AT1G75880.1 45.378 357 139 5 4 307 22 375 5.09e-99 296
Msa0523000 AT3G14820.1 44.413 349 135 5 5 302 5 345 1.03e-96 289
Msa0523000 AT5G42170.1 44.311 334 130 4 25 306 39 368 2.77e-96 289
Msa0523000 AT3G43570.1 46.000 300 135 4 31 307 25 320 1.42e-92 278
Msa0523000 AT1G20120.1 41.337 329 140 3 31 307 73 400 2.82e-92 280
Msa0523000 AT1G59406.1 43.465 329 130 5 31 307 25 349 5.85e-90 272
Msa0523000 AT1G59030.1 43.465 329 130 5 31 307 25 349 5.85e-90 272
Msa0523000 AT1G58725.1 43.465 329 130 5 31 307 25 349 5.85e-90 272
Msa0523000 AT1G20132.1 42.378 328 136 3 31 306 56 382 3.26e-86 264
Msa0523000 AT1G58520.3 43.168 322 134 5 31 307 25 342 4.63e-86 262
Msa0523000 AT1G58525.1 43.168 322 134 5 31 307 25 342 4.63e-86 262
Msa0523000 AT3G43550.1 51.681 238 103 4 9 245 10 236 9.18e-78 239
Msa0523000 AT1G20130.2 37.838 333 147 5 31 304 179 510 1.61e-73 235
Msa0523000 AT1G20130.1 37.838 333 147 5 31 304 199 530 5.22e-73 234
Msa0523000 AT1G06990.1 35.311 354 174 4 5 304 5 357 1.85e-71 225
Msa0523000 AT1G73610.1 38.762 307 140 5 31 294 30 331 1.54e-70 222
Msa0523000 AT2G31540.1 37.461 323 146 4 34 300 33 355 1.02e-69 221
Msa0523000 AT2G04570.1 35.143 350 167 4 9 306 8 349 1.28e-68 218
Msa0523000 AT2G42990.1 36.202 337 161 6 23 307 15 349 2.76e-68 216
Msa0523000 AT5G63170.1 40.134 299 138 5 33 291 25 322 2.77e-68 216
Msa0523000 AT1G58430.1 35.756 344 161 4 11 301 17 353 1.36e-67 215
Msa0523000 AT2G30220.1 37.658 316 144 3 34 296 31 346 1.40e-67 215
Msa0523000 AT4G26790.1 34.251 327 162 3 32 306 25 350 6.01e-66 211
Msa0523000 AT4G26790.2 34.251 327 162 3 32 306 25 350 6.01e-66 211
Msa0523000 AT2G30310.1 35.821 335 154 4 23 296 13 347 1.61e-65 210
Msa0523000 AT5G22810.1 35.000 320 152 4 35 299 33 351 7.25e-64 206
Msa0523000 AT5G45960.1 34.783 322 153 4 33 298 44 364 1.75e-63 205
Msa0523000 AT1G23500.1 40.461 304 134 5 31 291 30 329 2.04e-63 204
Msa0523000 AT1G20135.1 38.562 306 141 5 33 295 26 327 2.35e-62 201
Msa0523000 AT5G03810.1 34.783 322 156 4 35 303 29 349 4.07e-62 201
Msa0523000 AT3G16370.1 35.849 318 150 5 35 299 29 345 1.02e-60 197
Msa0523000 AT3G53100.1 32.399 321 164 3 35 303 28 347 2.15e-59 194
Msa0523000 AT1G75920.2 48.148 216 109 3 31 245 24 237 3.75e-59 193
Msa0523000 AT5G03820.1 33.437 323 160 4 35 303 32 353 8.63e-59 192
Msa0523000 AT5G03820.2 33.437 323 160 4 35 303 60 381 2.32e-58 192
Msa0523000 AT1G75910.1 46.759 216 113 2 31 245 23 237 7.25e-57 187
Msa0523000 AT1G75920.1 45.022 231 109 4 31 245 19 247 4.11e-55 182
Msa0523000 AT2G24560.2 42.927 205 116 1 34 237 32 236 1.10e-54 181
Msa0523000 AT2G24560.1 42.927 205 116 1 34 237 32 236 3.54e-54 181
Msa0523000 AT5G45950.1 30.447 358 192 7 4 307 2 356 7.02e-53 177
Msa0523000 AT2G40250.1 41.905 210 118 3 30 238 30 236 3.52e-52 175
Msa0523000 AT1G75930.1 45.872 218 111 6 31 245 24 237 1.05e-48 166
Msa0523000 AT1G75920.4 48.066 181 92 2 61 240 25 204 1.44e-48 165
Msa0523000 AT4G16230.1 40.488 205 115 4 35 235 29 230 2.41e-41 144
Msa0523000 AT1G75920.3 39.352 216 97 4 31 245 24 206 4.52e-40 142
Msa0523000 AT4G28780.1 27.586 348 196 6 11 304 5 350 9.14e-40 143
Msa0523000 AT4G10950.2 28.882 322 171 8 30 296 64 382 2.12e-39 143
Msa0523000 AT3G50400.1 29.052 327 171 7 33 299 31 356 2.43e-39 142
Msa0523000 AT2G23540.1 29.721 323 167 7 36 299 48 369 1.48e-38 140
Msa0523000 AT5G33370.1 30.357 336 176 9 25 304 19 352 1.48e-38 140
Msa0523000 AT1G53920.1 28.035 346 186 8 8 296 20 359 5.80e-38 139
Msa0523000 AT5G18430.1 28.616 318 172 4 36 299 28 344 4.80e-37 135
Msa0523000 AT4G10950.1 28.882 322 167 9 30 296 64 378 6.73e-37 136
Msa0523000 AT1G29670.1 30.323 310 157 8 35 290 31 335 8.50e-37 135
Msa0523000 AT1G71691.2 31.310 313 148 10 35 290 54 356 1.14e-36 135
Msa0523000 AT1G29670.2 30.323 310 157 8 35 290 99 403 2.17e-36 135
Msa0523000 AT5G08460.1 28.488 344 179 9 4 289 23 357 3.07e-36 134
Msa0523000 AT3G04290.1 29.641 334 175 9 28 304 21 351 4.07e-36 133
Msa0523000 AT1G71250.1 28.981 314 166 7 35 294 40 350 4.93e-36 133
Msa0523000 AT5G37690.1 27.841 352 185 8 4 299 1 339 1.05e-35 132
Msa0523000 AT5G33370.2 34.400 250 149 5 25 271 19 256 1.23e-35 131
Msa0523000 AT5G45670.1 27.974 311 165 7 35 290 28 334 2.19e-35 131
Msa0523000 AT5G41890.1 29.859 355 170 10 2 290 7 348 6.43e-35 130
Msa0523000 AT1G74460.1 27.812 320 172 8 38 302 25 340 9.96e-35 129
Msa0523000 AT4G18970.1 27.974 311 165 7 35 290 27 333 1.90e-34 129
Msa0523000 AT5G55050.1 29.641 334 169 7 32 304 35 363 2.70e-34 129
Msa0523000 AT4G18970.2 27.974 311 165 7 35 290 27 333 3.23e-34 129
Msa0523000 AT2G19010.2 30.286 350 170 13 1 290 18 353 3.61e-33 125
Msa0523000 AT2G19010.1 31.922 307 146 11 35 290 29 323 4.15e-33 125
Msa0523000 AT2G04020.1 37.805 246 131 12 17 251 25 259 8.92e-33 122
Msa0523000 AT1G29660.1 32.328 232 139 8 5 232 10 227 1.51e-31 121
Msa0523000 AT5G37690.2 26.989 352 180 9 4 299 1 331 2.56e-31 120
Msa0523000 AT1G71120.1 29.393 313 155 9 35 291 30 332 8.92e-31 119
Msa0523000 AT2G04020.2 38.739 222 119 10 17 232 25 235 1.05e-30 118
Msa0523000 AT2G19060.1 35.000 220 131 6 35 252 29 238 2.93e-30 117
Msa0523000 AT5G15720.2 37.089 213 121 8 35 240 29 235 4.06e-30 116
Msa0523000 AT5G15720.1 37.089 213 121 8 35 240 29 235 8.50e-30 116
Msa0523000 AT2G03980.2 34.667 225 126 8 33 254 40 246 1.53e-29 115
Msa0523000 AT2G03980.3 34.667 225 126 8 33 254 40 246 1.53e-29 115
Msa0523000 AT2G03980.1 34.667 225 126 8 33 254 40 246 1.53e-29 115
Msa0523000 AT2G03980.4 34.667 225 126 8 33 254 40 246 1.53e-29 115
Msa0523000 AT2G19050.1 28.664 307 156 9 35 290 30 324 2.82e-29 114
Msa0523000 AT1G71691.3 34.978 223 129 9 35 251 54 266 4.12e-29 113
Msa0523000 AT1G33811.1 30.290 241 153 8 1 234 1 233 4.72e-29 114
Msa0523000 AT2G19050.2 35.885 209 121 7 35 240 30 228 2.23e-28 110
Msa0523000 AT1G53940.2 27.385 325 159 12 36 294 39 352 2.75e-27 110
Msa0523000 AT5G40990.1 27.329 322 163 9 36 294 37 350 8.28e-27 108
Msa0523000 AT3G14225.2 25.948 343 182 11 12 294 20 350 2.13e-26 107
Msa0523000 AT3G14225.1 26.012 346 182 11 12 294 20 354 2.36e-26 107
Msa0523000 AT2G31550.1 29.439 214 95 4 143 300 1 214 5.88e-26 102
Msa0523000 AT4G30140.1 26.774 310 168 8 35 296 32 330 1.58e-24 102
Msa0523000 AT1G53940.1 32.524 206 119 8 36 232 39 233 1.81e-24 100
Msa0523000 AT1G53990.1 25.833 360 175 13 4 294 5 341 1.48e-23 99.4
Msa0523000 AT5G03610.1 32.143 196 118 6 37 232 44 224 1.42e-18 85.5
Msa0523000 AT4G16220.1 48.421 95 44 3 35 129 29 118 5.72e-17 79.3
Msa0523000 AT5G14450.1 26.786 280 172 9 1 267 11 270 2.97e-15 75.9
Msa0523000 AT2G27360.1 29.752 242 139 8 2 230 6 229 4.18e-15 75.5
Msa0523000 AT3G05180.1 25.514 243 155 7 34 266 34 260 3.29e-14 72.8
Msa0523000 AT1G67830.1 28.302 212 128 8 34 233 28 227 1.70e-13 70.9
Msa0523000 AT1G54020.2 27.273 264 163 9 23 280 18 258 5.45e-13 69.3
Msa0523000 AT1G28610.1 31.188 202 105 9 36 212 31 223 1.50e-12 66.6
Msa0523000 AT1G31550.1 30.000 210 123 9 33 230 33 230 2.43e-12 67.4
Msa0523000 AT1G31550.2 30.000 210 123 9 33 230 33 230 3.18e-12 67.0
Msa0523000 AT3G14220.1 25.641 234 147 8 6 235 7 217 3.66e-12 66.6
Msa0523000 AT1G54790.1 24.046 262 169 11 31 276 26 273 7.42e-12 65.9
Msa0523000 AT1G54790.2 23.664 262 170 10 31 276 26 273 8.22e-12 65.9
Msa0523000 AT1G28600.1 30.137 219 117 11 30 230 25 225 8.42e-12 65.9
Msa0523000 AT1G28640.1 28.571 210 129 10 34 232 33 232 1.22e-11 65.1
Msa0523000 AT1G28590.1 30.332 211 120 10 33 229 33 230 5.37e-11 63.2

Find 92 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTTCCAATTTCTTAA+AGG 0.119113 3_4:-76351472 Msa0523000:intron
GGAATTTCTGCCGGCGTATT+TGG 0.151357 3_4:-76351892 Msa0523000:CDS
GGAGTATACCTTTAAGAAAT+TGG 0.202417 3_4:+76351464 None:intergenic
GATTTGTTTCTTCATATTAT+TGG 0.211092 3_4:-76354382 Msa0523000:CDS
TGCTTTGCATCCGGTGGTTC+CGG 0.214847 3_4:-76351831 Msa0523000:CDS
AGATCGCTAGGTTGGATATT+TGG 0.224125 3_4:+76351867 None:intergenic
CAAAATACGTACCGCAGTTT+TGG 0.248518 3_4:+76351791 None:intergenic
CTTCACATTGGATAGCAAAT+TGG 0.263085 3_4:+76350012 None:intergenic
ATTTGTTTCTTCATATTATT+GGG 0.275115 3_4:-76354381 Msa0523000:CDS
CTATCCAATGTGAAGATGTT+AGG 0.281153 3_4:-76350004 Msa0523000:CDS
AGTTGAAGCATTGGGAATTA+AGG 0.290367 3_4:-76351913 Msa0523000:CDS
TTACACAACTAAGGCTAGTT+TGG 0.309693 3_4:-76354349 Msa0523000:CDS
CAACTTAAATTCAGCTGAAA+AGG 0.329200 3_4:-76354470 Msa0523000:five_prime_UTR
GCTTTGCATCCGGTGGTTCC+GGG 0.335556 3_4:-76351830 Msa0523000:CDS
TTAAAAGGAAATATATCAAC+TGG 0.352579 3_4:-76350606 Msa0523000:intron
CCTTTGAAATCTTTCCCATA+TGG 0.381210 3_4:+76354207 None:intergenic
TTTCCAGCAGTATTTGTGTT+TGG 0.389965 3_4:-76354297 Msa0523000:CDS
CCAACAACCGTTCTCTGAAA+TGG 0.393821 3_4:+76350536 None:intergenic
GTATTAAGTGTTCCACCAAT+TGG 0.400126 3_4:-76350566 Msa0523000:CDS
GGAAAGCTCAAAGGAATTGT+TGG 0.435787 3_4:-76351636 Msa0523000:CDS
AGTTATTTCTTACACAACTA+AGG 0.439754 3_4:-76354358 Msa0523000:CDS
CCATTTCAGAGAACGGTTGT+TGG 0.447437 3_4:-76350536 Msa0523000:CDS
TGGAGATTCAATCATGGATA+CGG 0.452846 3_4:-76354277 Msa0523000:CDS
AAAGTTCCATCAGACTATAT+AGG 0.464467 3_4:-76354153 Msa0523000:intron
TATTAAGTGTTCCACCAATT+GGG 0.465838 3_4:-76350565 Msa0523000:CDS
CTAGGATATTCTAAAGTGTA+TGG 0.475642 3_4:-76349758 Msa0523000:three_prime_UTR
TCTCCAAACACAAATACTGC+TGG 0.484675 3_4:+76354294 None:intergenic
TGAAATGGCACACACCCAAT+TGG 0.488937 3_4:+76350551 None:intergenic
TTTGAACAAATCTATTTGAC+CGG 0.492132 3_4:+76351668 None:intergenic
ACAGGTGTTTGCTTTGCATC+CGG 0.493934 3_4:-76351840 Msa0523000:CDS
TAAGGAAATATGAATGGCCT+AGG 0.493953 3_4:-76349776 Msa0523000:three_prime_UTR
CATACACTTTAGAATATCCT+AGG 0.495027 3_4:+76349759 None:intergenic
CATATTGTAGTTCTCTAAGA+TGG 0.497600 3_4:+76351526 None:intergenic
TATCCAATGTGAAGATGTTA+GGG 0.498721 3_4:-76350003 Msa0523000:CDS
ACTGCTGGAAATGAAACATT+TGG 0.500213 3_4:+76354309 None:intergenic
TTTCAAAAGGATGCTTCGTA+AGG 0.505384 3_4:-76349794 Msa0523000:three_prime_UTR
TTCAAAGGAGGCATCCCTAC+TGG 0.506470 3_4:-76354192 Msa0523000:CDS
AACTTAAATTCAGCTGAAAA+GGG 0.508152 3_4:-76354469 Msa0523000:five_prime_UTR
CAAATCTATTTGACCGGACA+AGG 0.513180 3_4:+76351674 None:intergenic
TGATATATCAGTTGAAGCAT+TGG 0.514954 3_4:-76351922 Msa0523000:intron
CAACTGGGTGCAAGGAGGAT+AGG 0.515492 3_4:-76350590 Msa0523000:CDS
GACAAAGGATGTTGTGGCAC+AGG 0.516730 3_4:-76350062 Msa0523000:CDS
TTTCAGAGAACGGTTGTTGG+AGG 0.525737 3_4:-76350533 Msa0523000:CDS
GATATATCAGTTGAAGCATT+GGG 0.530185 3_4:-76351921 Msa0523000:intron
TGTGTTTGGAGATTCAATCA+TGG 0.530748 3_4:-76354283 Msa0523000:CDS
CAGTCAGCTATATCCTTGTC+CGG 0.530888 3_4:-76351687 Msa0523000:CDS
GGGAATTAAGGAATTTCTGC+CGG 0.532610 3_4:-76351901 Msa0523000:CDS
GGAGATTCAATCATGGATAC+GGG 0.535105 3_4:-76354276 Msa0523000:CDS
TCCTTCTTACACTGACCTCA+TGG 0.539258 3_4:-76351499 Msa0523000:CDS
CAAGGAAAACACTGTTGGCT+AGG 0.539625 3_4:+76351592 None:intergenic
AAATATATCAACTGGGTGCA+AGG 0.545098 3_4:-76350598 Msa0523000:CDS
TTGTGGCACAGGAGCAGTAG+AGG 0.546163 3_4:-76350051 Msa0523000:CDS
TGGATCATACCCGGAACCAC+CGG 0.557250 3_4:+76351821 None:intergenic
TATGTACCTATATAGTCTGA+TGG 0.557306 3_4:+76354147 None:intergenic
AATGGCACACACCCAATTGG+TGG 0.562040 3_4:+76350554 None:intergenic
GCTTCGTAAGGAAATATGAA+TGG 0.562646 3_4:-76349782 Msa0523000:three_prime_UTR
CAACCTAGCGATCTTGTCAC+AGG 0.566337 3_4:-76351858 Msa0523000:CDS
GGATGTGAGTGGATCATACC+CGG 0.567159 3_4:+76351812 None:intergenic
CCATTGCAAAACCGACCAGT+AGG 0.568134 3_4:+76354177 None:intergenic
CTGTGACAAGATCGCTAGGT+TGG 0.568725 3_4:+76351859 None:intergenic
CTTTAAGAAATTGGAAGCAG+AGG 0.569727 3_4:+76351473 None:intergenic
ATAACATGAAAACATATGCT+AGG 0.572340 3_4:-76354242 Msa0523000:CDS
TATGAAGAAACAAATCATCA+AGG 0.572831 3_4:+76354389 None:intergenic
AACCACAAGGAAAACACTGT+TGG 0.579910 3_4:+76351587 None:intergenic
ACCATGAGGTCAGTGTAAGA+AGG 0.580211 3_4:+76351498 None:intergenic
TAAACAACTTAATTACATGT+AGG 0.585322 3_4:-76349863 Msa0523000:three_prime_UTR
GTGTGTGCCATTTCAGAGAA+CGG 0.586756 3_4:-76350543 Msa0523000:CDS
CATTGCAAAACCGACCAGTA+GGG 0.588059 3_4:+76354178 None:intergenic
GGTGTTTGCTTTGCATCCGG+TGG 0.595182 3_4:-76351837 Msa0523000:CDS
GCTGGAAATGAAACATTTGG+TGG 0.595734 3_4:+76354312 None:intergenic
TTGTGAGGTGGCGGTTGATG+AGG 0.598629 3_4:-76349728 Msa0523000:three_prime_UTR
TAAATTCAGCTGAAAAGGGA+GGG 0.602874 3_4:-76354465 Msa0523000:five_prime_UTR
CTCAAAGGAATTGTTGGAGA+GGG 0.603314 3_4:-76351630 Msa0523000:CDS
TTAAATTCAGCTGAAAAGGG+AGG 0.610663 3_4:-76354466 Msa0523000:five_prime_UTR
CCATATGGGAAAGATTTCAA+AGG 0.612170 3_4:-76354207 Msa0523000:CDS
ACACCTGTGACAAGATCGCT+AGG 0.618279 3_4:+76351855 None:intergenic
TATGGGAAAGATTTCAAAGG+AGG 0.625453 3_4:-76354204 Msa0523000:CDS
GGTTATAAAGTCGTTGACAA+AGG 0.626516 3_4:-76350077 Msa0523000:CDS
AGTCCCTAACATCTTCACAT+TGG 0.627021 3_4:+76350000 None:intergenic
GATTTGTTCAAAGAATACAT+AGG 0.628210 3_4:-76351657 Msa0523000:CDS
GTCGTTGACAAAGGATGTTG+TGG 0.629184 3_4:-76350068 Msa0523000:CDS
AAGGAGGCATCCCTACTGGT+CGG 0.630598 3_4:-76354188 Msa0523000:CDS
CGTTACTTCCTTGAACCACA+AGG 0.633044 3_4:+76351574 None:intergenic
TTGCTGTAAACACTCTCCGA+GGG 0.639385 3_4:+76349954 None:intergenic
ATATTTGGATCCAAATACGC+CGG 0.648403 3_4:+76351882 None:intergenic
CTTGCTGTAAACACTCTCCG+AGG 0.660448 3_4:+76349953 None:intergenic
GAATACATAGGAAAGCTCAA+AGG 0.664866 3_4:-76351645 Msa0523000:CDS
GCTCAAAGGAATTGTTGGAG+AGG 0.680708 3_4:-76351631 Msa0523000:CDS
TGGAAGCAGAGGCGACCATG+AGG 0.684097 3_4:+76351484 None:intergenic
TAAAAGGAAATATATCAACT+GGG 0.687393 3_4:-76350605 Msa0523000:intron
TATATCAACTGGGTGCAAGG+AGG 0.712465 3_4:-76350595 Msa0523000:CDS
TCCACTCACATCCAAAACTG+CGG 0.722558 3_4:-76351802 Msa0523000:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAAATATATTATTA+TGG + chr3_4:76350977-76350996 None:intergenic 0.0%
!!! TATAATATTTTGAATTTTTC+TGG + chr3_4:76350622-76350641 None:intergenic 10.0%
!!! AAAAAATTCTGAATTTTTTT+TGG + chr3_4:76350654-76350673 None:intergenic 10.0%
!!! ATGAATTTTTATATGTTTTA+AGG - chr3_4:76350693-76350712 Msa0523000:intron 10.0%
!! AAAAAATATATTATTATGGT+TGG + chr3_4:76350973-76350992 None:intergenic 10.0%
!!! AAAAAAAAAGTATAAATGAA+AGG + chr3_4:76352745-76352764 None:intergenic 10.0%
!!! ATAATTTTTAAAAACTTCAT+AGG - chr3_4:76352811-76352830 Msa0523000:intron 10.0%
!! ATTTCAAATTTATTATTCTT+AGG - chr3_4:76353244-76353263 Msa0523000:intron 10.0%
!!! TTTTTATTATTTTTTTGATC+AGG - chr3_4:76353283-76353302 Msa0523000:intron 10.0%
!!! TTTTATTATTTTTTTGATCA+GGG - chr3_4:76353284-76353303 Msa0523000:intron 10.0%
!!! ATTAGCATTTTTTTTTTTTT+TGG - chr3_4:76353785-76353804 Msa0523000:intron 10.0%
!!! TTTTTAAAATTTCTTTCAAA+AGG - chr3_4:76354295-76354314 Msa0523000:CDS 10.0%
!!! ATTTGTTTCTTCATATTATT+GGG - chr3_4:76349721-76349740 Msa0523000:three_prime_UTR 15.0%
!! ATTATATCTGAAGATAATTA+AGG + chr3_4:76349984-76350003 None:intergenic 15.0%
!!! TGCTAATATATATTTTTTGA+AGG - chr3_4:76350385-76350404 Msa0523000:intron 15.0%
!!! GCTAATATATATTTTTTGAA+GGG - chr3_4:76350386-76350405 Msa0523000:intron 15.0%
!!! TGAAGATTGAAAATTTTATA+GGG + chr3_4:76350538-76350557 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr3_4:76350852-76350871 Msa0523000:intron 15.0%
!! AAAAAGTTGACATATTTATA+GGG - chr3_4:76350912-76350931 Msa0523000:intron 15.0%
!! TATTTAACCCTAAAAATAAT+AGG - chr3_4:76350945-76350964 Msa0523000:intron 15.0%
!! AATAAATTTGCATAGATAAA+AGG + chr3_4:76351253-76351272 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr3_4:76351466-76351485 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr3_4:76351465-76351484 Msa0523000:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr3_4:76351489-76351508 Msa0523000:CDS 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr3_4:76351592-76351611 Msa0523000:CDS 15.0%
!!! TTGGTCAAAAATTTTAATAT+TGG + chr3_4:76352884-76352903 None:intergenic 15.0%
!! AAAAAGTTAAAAAATGATAG+AGG - chr3_4:76353115-76353134 Msa0523000:intron 15.0%
!! AAAAGTTAAAAAATGATAGA+GGG - chr3_4:76353116-76353135 Msa0523000:intron 15.0%
!!! ATTTTGAAAAGAAAAAAGTA+TGG - chr3_4:76353180-76353199 Msa0523000:intron 15.0%
!!! TTTTGAAAAGAAAAAAGTAT+GGG - chr3_4:76353181-76353200 Msa0523000:intron 15.0%
!! TAAGATTCATATATTTGATA+AGG - chr3_4:76353211-76353230 Msa0523000:intron 15.0%
!!! TTTAGAGAATTTAAAATGAA+GGG + chr3_4:76353356-76353375 None:intergenic 15.0%
!!! TTTTAGAGAATTTAAAATGA+AGG + chr3_4:76353357-76353376 None:intergenic 15.0%
!!! AGAAAATATTTGTTTTCATT+AGG - chr3_4:76353917-76353936 Msa0523000:intron 15.0%
!!! AAAAATGATTTTGTGTTTTA+AGG - chr3_4:76354405-76354424 Msa0523000:exon 15.0%
!!! AAAATGATTTTGTGTTTTAA+GGG - chr3_4:76354406-76354425 Msa0523000:exon 15.0%
!!! GATTTGTTTCTTCATATTAT+TGG - chr3_4:76349720-76349739 Msa0523000:three_prime_UTR 20.0%
!!! GATTTTTGCTAATGTATAAA+AGG - chr3_4:76350408-76350427 Msa0523000:intron 20.0%
!!! ATAAGGGTTAAATATGTTTT+TGG - chr3_4:76350451-76350470 Msa0523000:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr3_4:76350478-76350497 None:intergenic 20.0%
!!! GTGAAGATTGAAAATTTTAT+AGG + chr3_4:76350539-76350558 None:intergenic 20.0%
!!! AAATTTTCAATCTTCACTTT+TGG - chr3_4:76350542-76350561 Msa0523000:CDS 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr3_4:76350569-76350588 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr3_4:76350570-76350589 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr3_4:76350848-76350867 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr3_4:76350851-76350870 Msa0523000:intron 20.0%
!! CAAAAAGTTGACATATTTAT+AGG - chr3_4:76350911-76350930 Msa0523000:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG + chr3_4:76350939-76350958 None:intergenic 20.0%
!! TCTTTCATAAATTAGAATGT+AGG - chr3_4:76351288-76351307 Msa0523000:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr3_4:76351475-76351494 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr3_4:76351552-76351571 Msa0523000:CDS 20.0%
!!! AAAATTTGTTTCAAAATGAG+TGG + chr3_4:76351590-76351609 None:intergenic 20.0%
!! AGTATTAATTAAAATCTAGC+TGG - chr3_4:76351645-76351664 Msa0523000:CDS 20.0%
!!! ATAATTTTGAGACAATTTTG+TGG + chr3_4:76351900-76351919 None:intergenic 20.0%
!! TCATTTACTAAGTTTACTAT+TGG + chr3_4:76351954-76351973 None:intergenic 20.0%
!!! TTTAAAAACTTCATAGGTTT+TGG - chr3_4:76352817-76352836 Msa0523000:intron 20.0%
!!! TTAAAAACTTCATAGGTTTT+GGG - chr3_4:76352818-76352837 Msa0523000:intron 20.0%
!!! AAAATTTTTGACCAACTAAA+AGG - chr3_4:76352889-76352908 Msa0523000:intron 20.0%
!!! AAATTTTTGACCAACTAAAA+GGG - chr3_4:76352890-76352909 Msa0523000:intron 20.0%
!! ATAAATGTGAATATCTCTTT+CGG + chr3_4:76352975-76352994 None:intergenic 20.0%
!! TCAAATTTATTATTCTTAGG+CGG - chr3_4:76353247-76353266 Msa0523000:intron 20.0%
!!! TAAAATGAAGGGATTTTATA+AGG + chr3_4:76353345-76353364 None:intergenic 20.0%
!! TTTCTCTGAATTCTATTAAA+AGG - chr3_4:76353481-76353500 Msa0523000:intron 20.0%
!! TTAAAAGGAAATATATCAAC+TGG - chr3_4:76353496-76353515 Msa0523000:intron 20.0%
!! TAAAAGGAAATATATCAACT+GGG - chr3_4:76353497-76353516 Msa0523000:intron 20.0%
!! ATTCAACACTAAATTATCAA+AGG - chr3_4:76353637-76353656 Msa0523000:intron 20.0%
!! ATCCTAAATTACCAAAATTA+TGG - chr3_4:76353737-76353756 Msa0523000:intron 20.0%
!!! TACCATAATTTTGGTAATTT+AGG + chr3_4:76353742-76353761 None:intergenic 20.0%
!!! TACATGTTTTGCTTTTATAA+TGG - chr3_4:76354000-76354019 Msa0523000:intron 20.0%
!! TAAACAACTTAATTACATGT+AGG - chr3_4:76354239-76354258 Msa0523000:CDS 20.0%
!!! AAATTTGTTTTGCAAGAAAT+CGG + chr3_4:76354270-76354289 None:intergenic 20.0%
!!! AAATGATTTTGTGTTTTAAG+GGG - chr3_4:76354407-76354426 Msa0523000:exon 20.0%
! AACTTAAATTCAGCTGAAAA+GGG - chr3_4:76349633-76349652 Msa0523000:three_prime_UTR 25.0%
! TATGAAGAAACAAATCATCA+AGG + chr3_4:76349716-76349735 None:intergenic 25.0%
!!! AGTTATTTCTTACACAACTA+AGG - chr3_4:76349744-76349763 Msa0523000:three_prime_UTR 25.0%
! ATAACATGAAAACATATGCT+AGG - chr3_4:76349860-76349879 Msa0523000:three_prime_UTR 25.0%
!! CAGAGACATTTTATCTAAAA+TGG - chr3_4:76350193-76350212 Msa0523000:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG + chr3_4:76350479-76350498 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr3_4:76350881-76350900 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr3_4:76350880-76350899 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr3_4:76350880-76350899 Msa0523000:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr3_4:76350881-76350900 Msa0523000:intron 25.0%
!!! AAATTTTTTAGGTTCATCCA+TGG + chr3_4:76351155-76351174 None:intergenic 25.0%
! CCTAAAAAATTTACTAGATC+CGG - chr3_4:76351163-76351182 Msa0523000:intron 25.0%
! TTCATAAATTAGAATGTAGG+AGG - chr3_4:76351291-76351310 Msa0523000:intron 25.0%
! AATGATTAAGAGAAAGAGAA+TGG - chr3_4:76351432-76351451 Msa0523000:intron 25.0%
! AATGAAATAGGAGTTTGAAA+AGG - chr3_4:76351674-76351693 Msa0523000:CDS 25.0%
!! AATTTTGTGGATCCATTATT+TGG + chr3_4:76351887-76351906 None:intergenic 25.0%
! AAAGACAAGTTATAAACCAT+GGG - chr3_4:76351988-76352007 Msa0523000:intron 25.0%
!! CAATTTACTTCCTTTTCTAT+TGG - chr3_4:76352155-76352174 Msa0523000:intron 25.0%
! ATATATCACACCAATAGAAA+AGG + chr3_4:76352168-76352187 None:intergenic 25.0%
! TTTCTTATTCCTTTCTAACT+TGG - chr3_4:76352381-76352400 Msa0523000:intron 25.0%
! TTTGAACAAATCTATTTGAC+CGG + chr3_4:76352437-76352456 None:intergenic 25.0%
!! GATTTGTTCAAAGAATACAT+AGG - chr3_4:76352445-76352464 Msa0523000:intron 25.0%
! ATGGCTCAAAAAATATGTAT+TGG + chr3_4:76352560-76352579 None:intergenic 25.0%
!! GCTGAACTTTTAAATTCTTT+AGG + chr3_4:76352699-76352718 None:intergenic 25.0%
! AGTAATTGCTTATTTAACGT+TGG - chr3_4:76352785-76352804 Msa0523000:intron 25.0%
! GTAATTGCTTATTTAACGTT+GGG - chr3_4:76352786-76352805 Msa0523000:intron 25.0%
!! TAAAAACTTCATAGGTTTTG+GGG - chr3_4:76352819-76352838 Msa0523000:intron 25.0%
!! GGTTATACATACCATAATTT+TGG + chr3_4:76353751-76353770 None:intergenic 25.0%
!! ATGCTAATAAAAAGAAGTGT+CGG + chr3_4:76353773-76353792 None:intergenic 25.0%
!!! CATGCAAATACTTTTTAACA+TGG + chr3_4:76353958-76353977 None:intergenic 25.0%
!! TGTATATATTTTCGAAGAAG+AGG + chr3_4:76354184-76354203 None:intergenic 25.0%
CAACTTAAATTCAGCTGAAA+AGG - chr3_4:76349632-76349651 Msa0523000:three_prime_UTR 30.0%
AAAGTTCCATCAGACTATAT+AGG - chr3_4:76349949-76349968 Msa0523000:CDS 30.0%
TATGTACCTATATAGTCTGA+TGG + chr3_4:76349958-76349977 None:intergenic 30.0%
ATGTGTTGAAGATGTATAAG+TGG + chr3_4:76350045-76350064 None:intergenic 30.0%
CTTATACATCTTCAACACAT+TGG - chr3_4:76350045-76350064 Msa0523000:CDS 30.0%
TGATATTGCAACTGAAATTG+TGG + chr3_4:76350170-76350189 None:intergenic 30.0%
TAGAAAAAACCATCTAAGAG+TGG - chr3_4:76350303-76350322 Msa0523000:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr3_4:76350867-76350886 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr3_4:76350867-76350886 Msa0523000:intron 30.0%
!!! GTTGGTGCCTATTATTTTTA+GGG + chr3_4:76350955-76350974 None:intergenic 30.0%
!!! CCGGATCTAGTAAATTTTTT+AGG + chr3_4:76351166-76351185 None:intergenic 30.0%
! CTCTCTCTTGACATATTTTA+TGG + chr3_4:76351332-76351351 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr3_4:76351383-76351402 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr3_4:76351384-76351403 Msa0523000:intron 30.0%
! AAGGTATTAGAACTTGAACA+AGG - chr3_4:76351693-76351712 Msa0523000:intron 30.0%
!!! GTTGAGTTTTGATTTTTGAG+TGG - chr3_4:76351757-76351776 Msa0523000:intron 30.0%
!!! AGTTGTTTTTTCCCAACAAA+TGG - chr3_4:76351789-76351808 Msa0523000:intron 30.0%
TTATTTGGAAGCTCGTAATA+TGG + chr3_4:76351872-76351891 None:intergenic 30.0%
TATTACGAGCTTCCAAATAA+TGG - chr3_4:76351872-76351891 Msa0523000:CDS 30.0%
TACTAAGTTTACTATTGGAG+TGG + chr3_4:76351949-76351968 None:intergenic 30.0%
! CATGGTTTATAACTTGTCTT+TGG + chr3_4:76351989-76352008 None:intergenic 30.0%
CAAAGACAAGTTATAAACCA+TGG - chr3_4:76351987-76352006 Msa0523000:intron 30.0%
TGATATATCAGTTGAAGCAT+TGG - chr3_4:76352180-76352199 Msa0523000:intron 30.0%
! GATATATCAGTTGAAGCATT+GGG - chr3_4:76352181-76352200 Msa0523000:intron 30.0%
TAATAGTGACCAAGTTAGAA+AGG + chr3_4:76352393-76352412 None:intergenic 30.0%
! CATATTGTAGTTCTCTAAGA+TGG + chr3_4:76352579-76352598 None:intergenic 30.0%
! GGAGTATACCTTTAAGAAAT+TGG + chr3_4:76352641-76352660 None:intergenic 30.0%
AAGGTATACTCCTAATAACA+TGG - chr3_4:76352649-76352668 Msa0523000:intron 30.0%
CATTGAAACACCATGTTATT+AGG + chr3_4:76352662-76352681 None:intergenic 30.0%
!! AACATTGATTCACCGTATTA+TGG + chr3_4:76352943-76352962 None:intergenic 30.0%
!!! ACTTTTTTTGTGTCTTCCAT+AGG + chr3_4:76353035-76353054 None:intergenic 30.0%
ATATTTGAATTACCTCATCC+AGG - chr3_4:76353399-76353418 Msa0523000:intron 30.0%
TATTAAGTGTTCCACCAATT+GGG - chr3_4:76353537-76353556 Msa0523000:intron 30.0%
CACTAAATTATCAAAGGAGT+TGG - chr3_4:76353643-76353662 Msa0523000:intron 30.0%
!! TGCTAATAAAAAGAAGTGTC+GGG + chr3_4:76353772-76353791 None:intergenic 30.0%
!! TGTTTTGCTTTTATAATGGC+AGG - chr3_4:76354004-76354023 Msa0523000:intron 30.0%
TATCCAATGTGAAGATGTTA+GGG - chr3_4:76354099-76354118 Msa0523000:intron 30.0%
CAAAAAGAAACTAGAAGAAC+TGG + chr3_4:76354207-76354226 None:intergenic 30.0%
!!! CAGTTCTTCTAGTTTCTTTT+TGG - chr3_4:76354205-76354224 Msa0523000:CDS 30.0%
!! CATACACTTTAGAATATCCT+AGG + chr3_4:76354346-76354365 None:intergenic 30.0%
!! CTAGGATATTCTAAAGTGTA+TGG - chr3_4:76354344-76354363 Msa0523000:CDS 30.0%
TTAAATTCAGCTGAAAAGGG+AGG - chr3_4:76349636-76349655 Msa0523000:three_prime_UTR 35.0%
TAAATTCAGCTGAAAAGGGA+GGG - chr3_4:76349637-76349656 Msa0523000:three_prime_UTR 35.0%
! TTACACAACTAAGGCTAGTT+TGG - chr3_4:76349753-76349772 Msa0523000:three_prime_UTR 35.0%
ACTGCTGGAAATGAAACATT+TGG + chr3_4:76349796-76349815 None:intergenic 35.0%
TTTCCAGCAGTATTTGTGTT+TGG - chr3_4:76349805-76349824 Msa0523000:three_prime_UTR 35.0%
TGTGTTTGGAGATTCAATCA+TGG - chr3_4:76349819-76349838 Msa0523000:three_prime_UTR 35.0%
TGGAGATTCAATCATGGATA+CGG - chr3_4:76349825-76349844 Msa0523000:three_prime_UTR 35.0%
! AGGTGCAATTTTCTTCCATA+TGG - chr3_4:76349880-76349899 Msa0523000:three_prime_UTR 35.0%
! GGTGCAATTTTCTTCCATAT+GGG - chr3_4:76349881-76349900 Msa0523000:three_prime_UTR 35.0%
!! CCTTTGAAATCTTTCCCATA+TGG + chr3_4:76349898-76349917 None:intergenic 35.0%
CCATATGGGAAAGATTTCAA+AGG - chr3_4:76349895-76349914 Msa0523000:exon 35.0%
TATGGGAAAGATTTCAAAGG+AGG - chr3_4:76349898-76349917 Msa0523000:exon 35.0%
GGAGTATACTATTTGTGTCA+TGG - chr3_4:76350066-76350085 Msa0523000:CDS 35.0%
TATAACTGTTTGCACCGTAA+GGG + chr3_4:76350111-76350130 None:intergenic 35.0%
ATATAACTGTTTGCACCGTA+AGG + chr3_4:76350112-76350131 None:intergenic 35.0%
ATTACCTCTCGATGAATTGA+GGG + chr3_4:76350282-76350301 None:intergenic 35.0%
!! GGTTGGTGCCTATTATTTTT+AGG + chr3_4:76350956-76350975 None:intergenic 35.0%
! AATACTTAGAGCATCTCCAA+TGG - chr3_4:76350994-76351013 Msa0523000:intron 35.0%
ATATTAGGTGCTCCCTATTT+GGG + chr3_4:76351113-76351132 None:intergenic 35.0%
!! AAATAGGGAGCACCTAATAT+GGG - chr3_4:76351113-76351132 Msa0523000:intron 35.0%
!! TTCAATTTGGTGCCCATATT+AGG + chr3_4:76351128-76351147 None:intergenic 35.0%
TAATATGGGCACCAAATTGA+AGG - chr3_4:76351127-76351146 Msa0523000:intron 35.0%
AATATGGGCACCAAATTGAA+GGG - chr3_4:76351128-76351147 Msa0523000:intron 35.0%
GAGTGTTTGAGAAAGATAAG+AGG + chr3_4:76351219-76351238 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr3_4:76351514-76351533 Msa0523000:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr3_4:76351518-76351537 Msa0523000:CDS 35.0%
!!! GACACTCATTTTGAAACAGA+GGG - chr3_4:76351622-76351641 Msa0523000:CDS 35.0%
! AGCTGGTGTTGAAATGAAAT+AGG - chr3_4:76351662-76351681 Msa0523000:CDS 35.0%
! TTTTCCCAACAAATGGTGAT+CGG - chr3_4:76351796-76351815 Msa0523000:intron 35.0%
TCACCCATGATCTTTCAATT+TGG - chr3_4:76351843-76351862 Msa0523000:CDS 35.0%
CACCCATGATCTTTCAATTT+GGG - chr3_4:76351844-76351863 Msa0523000:CDS 35.0%
ACCCATGATCTTTCAATTTG+GGG - chr3_4:76351845-76351864 Msa0523000:CDS 35.0%
ACCCCAAATTGAAAGATCAT+GGG + chr3_4:76351849-76351868 None:intergenic 35.0%
GTGGCAAAAGCAATAAAAAG+TGG + chr3_4:76351930-76351949 None:intergenic 35.0%
ACAAGTTATAAACCATGGGA+CGG - chr3_4:76351992-76352011 Msa0523000:intron 35.0%
!! AGTTGAAGCATTGGGAATTA+AGG - chr3_4:76352189-76352208 Msa0523000:intron 35.0%
ATATTTGGATCCAAATACGC+CGG + chr3_4:76352223-76352242 None:intergenic 35.0%
GAATACATAGGAAAGCTCAA+AGG - chr3_4:76352457-76352476 Msa0523000:intron 35.0%
! CTTTAAGAAATTGGAAGCAG+AGG + chr3_4:76352632-76352651 None:intergenic 35.0%
CTCTGCTTCCAATTTCTTAA+AGG - chr3_4:76352630-76352649 Msa0523000:intron 35.0%
! ATTGATTCACCGTATTATGG+AGG + chr3_4:76352940-76352959 None:intergenic 35.0%
CTCCTCAAGATTATCTATAG+TGG - chr3_4:76353004-76353023 Msa0523000:intron 35.0%
CTCCACTATAGATAATCTTG+AGG + chr3_4:76353009-76353028 None:intergenic 35.0%
CTCAAGATTATCTATAGTGG+AGG - chr3_4:76353007-76353026 Msa0523000:intron 35.0%
CTTACACATTCTTTAACTCC+TGG + chr3_4:76353420-76353439 None:intergenic 35.0%
AAATATATCAACTGGGTGCA+AGG - chr3_4:76353504-76353523 Msa0523000:intron 35.0%
GTATTAAGTGTTCCACCAAT+TGG - chr3_4:76353536-76353555 Msa0523000:intron 35.0%
AGGTAAACCATCCTTGTATT+GGG + chr3_4:76353689-76353708 None:intergenic 35.0%
AAGGTAAACCATCCTTGTAT+TGG + chr3_4:76353690-76353709 None:intergenic 35.0%
GAAGAGGATTGTAAACATCA+AGG + chr3_4:76353709-76353728 None:intergenic 35.0%
! TTTAGGATGATGTCAAGAAG+AGG + chr3_4:76353725-76353744 None:intergenic 35.0%
GGTTATAAAGTCGTTGACAA+AGG - chr3_4:76354025-76354044 Msa0523000:intron 35.0%
CTTCACATTGGATAGCAAAT+TGG + chr3_4:76354093-76354112 None:intergenic 35.0%
CTATCCAATGTGAAGATGTT+AGG - chr3_4:76354098-76354117 Msa0523000:intron 35.0%
TTTCAAAAGGATGCTTCGTA+AGG - chr3_4:76354308-76354327 Msa0523000:CDS 35.0%
GCTTCGTAAGGAAATATGAA+TGG - chr3_4:76354320-76354339 Msa0523000:CDS 35.0%
TAAGGAAATATGAATGGCCT+AGG - chr3_4:76354326-76354345 Msa0523000:CDS 35.0%
GCTGGAAATGAAACATTTGG+TGG + chr3_4:76349793-76349812 None:intergenic 40.0%
TCTCCAAACACAAATACTGC+TGG + chr3_4:76349811-76349830 None:intergenic 40.0%
GGAGATTCAATCATGGATAC+GGG - chr3_4:76349826-76349845 Msa0523000:three_prime_UTR 40.0%
AAGGGCAACAAGCTCAATTT+AGG + chr3_4:76350093-76350112 None:intergenic 40.0%
!! AATTGAGCTTGTTGCCCTTA+CGG - chr3_4:76350094-76350113 Msa0523000:intron 40.0%
ATTACCCTCAATTCATCGAG+AGG - chr3_4:76350275-76350294 Msa0523000:intron 40.0%
CATTACCTCTCGATGAATTG+AGG + chr3_4:76350283-76350302 None:intergenic 40.0%
TTTCACTCACCACTCTTAGA+TGG + chr3_4:76350315-76350334 None:intergenic 40.0%
ACTCATCATGAGTTCACCAT+TGG + chr3_4:76351013-76351032 None:intergenic 40.0%
CATATTAGGTGCTCCCTATT+TGG + chr3_4:76351114-76351133 None:intergenic 40.0%
!! CAAATAGGGAGCACCTAATA+TGG - chr3_4:76351112-76351131 Msa0523000:intron 40.0%
ATATGGGCACCAAATTGAAG+GGG - chr3_4:76351129-76351148 Msa0523000:intron 40.0%
AAAAACAAGAGTTGACTGGC+CGG + chr3_4:76351185-76351204 None:intergenic 40.0%
!!! GCCAGTCAACTCTTGTTTTT+GGG - chr3_4:76351185-76351204 Msa0523000:intron 40.0%
!!! CCAGTCAACTCTTGTTTTTG+GGG - chr3_4:76351186-76351205 Msa0523000:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_4:76351379-76351398 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr3_4:76351517-76351536 Msa0523000:CDS 40.0%
!!! CGACACTCATTTTGAAACAG+AGG - chr3_4:76351621-76351640 Msa0523000:CDS 40.0%
TCCTTCAACTACTACTTCTG+TGG + chr3_4:76351725-76351744 None:intergenic 40.0%
GACCCCAAATTGAAAGATCA+TGG + chr3_4:76351850-76351869 None:intergenic 40.0%
GGGAATTAAGGAATTTCTGC+CGG - chr3_4:76352201-76352220 Msa0523000:intron 40.0%
! AGATCGCTAGGTTGGATATT+TGG + chr3_4:76352238-76352257 None:intergenic 40.0%
! CAAAATACGTACCGCAGTTT+TGG + chr3_4:76352314-76352333 None:intergenic 40.0%
CAAATCTATTTGACCGGACA+AGG + chr3_4:76352431-76352450 None:intergenic 40.0%
GGAAAGCTCAAAGGAATTGT+TGG - chr3_4:76352466-76352485 Msa0523000:intron 40.0%
CTCAAAGGAATTGTTGGAGA+GGG - chr3_4:76352472-76352491 Msa0523000:intron 40.0%
AACCACAAGGAAAACACTGT+TGG + chr3_4:76352518-76352537 None:intergenic 40.0%
! AGTGTTTTCCTTGTGGTTCA+AGG - chr3_4:76352520-76352539 Msa0523000:intron 40.0%
! TTAGACTCGACCCTTTTAGT+TGG + chr3_4:76352903-76352922 None:intergenic 40.0%
AACTAAAAGGGTCGAGTCTA+AGG - chr3_4:76352902-76352921 Msa0523000:intron 40.0%
AGGTCTAGACCTCCATAATA+CGG - chr3_4:76352928-76352947 Msa0523000:intron 40.0%
! ATCTATAGTGGAGGAACCTA+TGG - chr3_4:76353016-76353035 Msa0523000:intron 40.0%
CATTCTTTAACTCCTGGATG+AGG + chr3_4:76353414-76353433 None:intergenic 40.0%
AGTCCCTAACATCTTCACAT+TGG + chr3_4:76354105-76354124 None:intergenic 40.0%
! ATGTTAGGGACTACGTTTTC+TGG - chr3_4:76354113-76354132 Msa0523000:intron 40.0%
! TGTTAGGGACTACGTTTTCT+GGG - chr3_4:76354114-76354133 Msa0523000:intron 40.0%
!! GTGTATGGTGATGTTTTGTG+AGG - chr3_4:76354359-76354378 Msa0523000:CDS 40.0%
!! TATGGTGATGTTTTGTGAGG+TGG - chr3_4:76354362-76354381 Msa0523000:CDS 40.0%
CATTGCAAAACCGACCAGTA+GGG + chr3_4:76349927-76349946 None:intergenic 45.0%
GTAGTCAACGATCACAGTTG+CGG + chr3_4:76350225-76350244 None:intergenic 45.0%
!!! GGCCAGTCAACTCTTGTTTT+TGG - chr3_4:76351184-76351203 Msa0523000:intron 45.0%
CCCCAAAAACAAGAGTTGAC+TGG + chr3_4:76351189-76351208 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_4:76351380-76351399 None:intergenic 45.0%
GCCACAGAAGTAGTAGTTGA+AGG - chr3_4:76351721-76351740 Msa0523000:intron 45.0%
GTGAAATTTGAACCGTCCCA+TGG + chr3_4:76352007-76352026 None:intergenic 45.0%
GTTTGCACGCATTCAATGCA+TGG + chr3_4:76352094-76352113 None:intergenic 45.0%
GACTAGGGAGTCTGAATTCA+AGG - chr3_4:76352127-76352146 Msa0523000:intron 45.0%
ACAGGTGTTTGCTTTGCATC+CGG - chr3_4:76352262-76352281 Msa0523000:intron 45.0%
TCCACTCACATCCAAAACTG+CGG - chr3_4:76352300-76352319 Msa0523000:intron 45.0%
CAGTCAGCTATATCCTTGTC+CGG - chr3_4:76352415-76352434 Msa0523000:intron 45.0%
GCTCAAAGGAATTGTTGGAG+AGG - chr3_4:76352471-76352490 Msa0523000:intron 45.0%
! CAAGGAAAACACTGTTGGCT+AGG + chr3_4:76352513-76352532 None:intergenic 45.0%
! AGCCAACAGTGTTTTCCTTG+TGG - chr3_4:76352513-76352532 Msa0523000:intron 45.0%
CGTTACTTCCTTGAACCACA+AGG + chr3_4:76352531-76352550 None:intergenic 45.0%
TCCTTCTTACACTGACCTCA+TGG - chr3_4:76352603-76352622 Msa0523000:intron 45.0%
ACCATGAGGTCAGTGTAAGA+AGG + chr3_4:76352607-76352626 None:intergenic 45.0%
AAGGGTCGAGTCTAAGGAAA+AGG - chr3_4:76352908-76352927 Msa0523000:intron 45.0%
TATATCAACTGGGTGCAAGG+AGG - chr3_4:76353507-76353526 Msa0523000:intron 45.0%
TGAAATGGCACACACCCAAT+TGG + chr3_4:76353554-76353573 None:intergenic 45.0%
!! GTGTGTGCCATTTCAGAGAA+CGG - chr3_4:76353559-76353578 Msa0523000:intron 45.0%
! CCAACAACCGTTCTCTGAAA+TGG + chr3_4:76353569-76353588 None:intergenic 45.0%
CCATTTCAGAGAACGGTTGT+TGG - chr3_4:76353566-76353585 Msa0523000:intron 45.0%
TTTCAGAGAACGGTTGTTGG+AGG - chr3_4:76353569-76353588 Msa0523000:intron 45.0%
! AGGAGTTGGCTTCTCTTAAC+CGG - chr3_4:76353657-76353676 Msa0523000:intron 45.0%
TCCTTGTATTGGGCAAGTTC+CGG + chr3_4:76353679-76353698 None:intergenic 45.0%
GAACTTGCCCAATACAAGGA+TGG - chr3_4:76353679-76353698 Msa0523000:intron 45.0%
GTCGTTGACAAAGGATGTTG+TGG - chr3_4:76354034-76354053 Msa0523000:intron 45.0%
TTGCTGTAAACACTCTCCGA+GGG + chr3_4:76354151-76354170 None:intergenic 45.0%
!!! TTTTAACAATAATAAAAATA+AGG - chr3_4:76350434-76350453 Msa0523000:intron 5.0%
!! TTTAACAATAATAAAAATAA+GGG - chr3_4:76350435-76350454 Msa0523000:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - chr3_4:76350747-76350766 Msa0523000:intron 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr3_4:76350820-76350839 Msa0523000:intron 5.0%
!! CAAAAATTAAATTAAAAATA+GGG - chr3_4:76350821-76350840 Msa0523000:intron 5.0%
!! AAAAATTAAATTAAAAATAG+GGG - chr3_4:76350822-76350841 Msa0523000:intron 5.0%
!! TTCAAAGGAGGCATCCCTAC+TGG - chr3_4:76349910-76349929 Msa0523000:CDS 50.0%
CCATTGCAAAACCGACCAGT+AGG + chr3_4:76349928-76349947 None:intergenic 50.0%
!! CCTACTGGTCGGTTTTGCAA+TGG - chr3_4:76349925-76349944 Msa0523000:CDS 50.0%
TACAACCCCGCTCCCAAATA+GGG - chr3_4:76351098-76351117 Msa0523000:intron 50.0%
CATCCATGGCCCCTTCAATT+TGG + chr3_4:76351141-76351160 None:intergenic 50.0%
CCAGCCGATCACCATTTGTT+GGG + chr3_4:76351803-76351822 None:intergenic 50.0%
TCCAGCCGATCACCATTTGT+TGG + chr3_4:76351804-76351823 None:intergenic 50.0%
GCATTGAATGCGTGCAAACG+AGG - chr3_4:76352095-76352114 Msa0523000:intron 50.0%
TGAATGCGTGCAAACGAGGA+CGG - chr3_4:76352099-76352118 Msa0523000:intron 50.0%
GGAATTTCTGCCGGCGTATT+TGG - chr3_4:76352210-76352229 Msa0523000:intron 50.0%
CTGTGACAAGATCGCTAGGT+TGG + chr3_4:76352246-76352265 None:intergenic 50.0%
CAACCTAGCGATCTTGTCAC+AGG - chr3_4:76352244-76352263 Msa0523000:intron 50.0%
ACACCTGTGACAAGATCGCT+AGG + chr3_4:76352250-76352269 None:intergenic 50.0%
GGATGTGAGTGGATCATACC+CGG + chr3_4:76352293-76352312 None:intergenic 50.0%
!!! ACCGCAGTTTTGGATGTGAG+TGG + chr3_4:76352304-76352323 None:intergenic 50.0%
CGGACAAGGATATAGCTGAC+TGG + chr3_4:76352417-76352436 None:intergenic 50.0%
AATGGCACACACCCAATTGG+TGG + chr3_4:76353551-76353570 None:intergenic 50.0%
ACCGGAACTTGCCCAATACA+AGG - chr3_4:76353675-76353694 Msa0523000:intron 50.0%
GACAAAGGATGTTGTGGCAC+AGG - chr3_4:76354040-76354059 Msa0523000:intron 50.0%
! CTGGGACAGTTTTCATCCCT+CGG - chr3_4:76354132-76354151 Msa0523000:intron 50.0%
! CTTGCTGTAAACACTCTCCG+AGG + chr3_4:76354152-76354171 None:intergenic 50.0%
! GGTGATGTTTTGTGAGGTGG+CGG - chr3_4:76354365-76354384 Msa0523000:CDS 50.0%
!! AAGGAGGCATCCCTACTGGT+CGG - chr3_4:76349914-76349933 Msa0523000:CDS 55.0%
CTACAACCCCGCTCCCAAAT+AGG - chr3_4:76351097-76351116 Msa0523000:intron 55.0%
AGGTGCTCCCTATTTGGGAG+CGG + chr3_4:76351108-76351127 None:intergenic 55.0%
GCACCAAATTGAAGGGGCCA+TGG - chr3_4:76351135-76351154 Msa0523000:intron 55.0%
CCCAACAAATGGTGATCGGC+TGG - chr3_4:76351800-76351819 Msa0523000:intron 55.0%
AAATGGTGATCGGCTGGAGC+TGG - chr3_4:76351806-76351825 Msa0523000:CDS 55.0%
GGTGTTTGCTTTGCATCCGG+TGG - chr3_4:76352265-76352284 Msa0523000:intron 55.0%
TGCTTTGCATCCGGTGGTTC+CGG - chr3_4:76352271-76352290 Msa0523000:intron 55.0%
TGGATCATACCCGGAACCAC+CGG + chr3_4:76352284-76352303 None:intergenic 55.0%
CAACTGGGTGCAAGGAGGAT+AGG - chr3_4:76353512-76353531 Msa0523000:intron 55.0%
TTGTGGCACAGGAGCAGTAG+AGG - chr3_4:76354051-76354070 Msa0523000:intron 55.0%
! TTGTGAGGTGGCGGTTGATG+AGG - chr3_4:76354374-76354393 Msa0523000:CDS 55.0%
GTGCTCCCTATTTGGGAGCG+GGG + chr3_4:76351106-76351125 None:intergenic 60.0%
GGTGCTCCCTATTTGGGAGC+GGG + chr3_4:76351107-76351126 None:intergenic 60.0%
TGCGTGCAAACGAGGACGGT+AGG - chr3_4:76352103-76352122 Msa0523000:intron 60.0%
GCGTGCAAACGAGGACGGTA+GGG - chr3_4:76352104-76352123 Msa0523000:intron 60.0%
CGTGCAAACGAGGACGGTAG+GGG - chr3_4:76352105-76352124 Msa0523000:intron 60.0%
AACGAGGACGGTAGGGGACT+AGG - chr3_4:76352111-76352130 Msa0523000:intron 60.0%
ACGAGGACGGTAGGGGACTA+GGG - chr3_4:76352112-76352131 Msa0523000:intron 60.0%
GCTTTGCATCCGGTGGTTCC+GGG - chr3_4:76352272-76352291 Msa0523000:intron 60.0%
TGGAAGCAGAGGCGACCATG+AGG + chr3_4:76352621-76352640 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76349623 76354501 76349623 ID=Msa0523000;Name=Msa0523000
chr3_4 mRNA 76349623 76354501 76349623 ID=Msa0523000-mRNA-1;Parent=Msa0523000;Name=Msa0523000-mRNA-1;_AED=0.31;_eAED=0.31;_QI=83|0.75|0.8|1|0.5|0.8|5|285|307
chr3_4 exon 76349623 76350098 76349623 ID=Msa0523000-mRNA-1:exon:22114;Parent=Msa0523000-mRNA-1
chr3_4 exon 76350519 76350621 76350519 ID=Msa0523000-mRNA-1:exon:22113;Parent=Msa0523000-mRNA-1
chr3_4 exon 76351473 76351706 76351473 ID=Msa0523000-mRNA-1:exon:22112;Parent=Msa0523000-mRNA-1
chr3_4 exon 76351803 76351933 76351803 ID=Msa0523000-mRNA-1:exon:22111;Parent=Msa0523000-mRNA-1
chr3_4 exon 76354154 76354501 76354154 ID=Msa0523000-mRNA-1:exon:22110;Parent=Msa0523000-mRNA-1
chr3_4 five_prime_UTR 76354419 76354501 76354419 ID=Msa0523000-mRNA-1:five_prime_utr;Parent=Msa0523000-mRNA-1
chr3_4 CDS 76354154 76354418 76354154 ID=Msa0523000-mRNA-1:cds;Parent=Msa0523000-mRNA-1
chr3_4 CDS 76351803 76351933 76351803 ID=Msa0523000-mRNA-1:cds;Parent=Msa0523000-mRNA-1
chr3_4 CDS 76351473 76351706 76351473 ID=Msa0523000-mRNA-1:cds;Parent=Msa0523000-mRNA-1
chr3_4 CDS 76350519 76350621 76350519 ID=Msa0523000-mRNA-1:cds;Parent=Msa0523000-mRNA-1
chr3_4 CDS 76349908 76350098 76349908 ID=Msa0523000-mRNA-1:cds;Parent=Msa0523000-mRNA-1
chr3_4 three_prime_UTR 76349623 76349907 76349623 ID=Msa0523000-mRNA-1:three_prime_utr;Parent=Msa0523000-mRNA-1
Gene Sequence

>Msa0523000

ATGTGTTCCTTGATGATTTGTTTCTTCATATTATTGGGAGTTATTTCTTACACAACTAAGGCTAGTTTGGCAACACTAGTGCTTCCACCAAATGTTTCATTTCCAGCAGTATTTGTGTTTGGAGATTCAATCATGGATACGGGCAACAACAATAATAACATGAAAACATATGCTAGGTGCAATTTTCTTCCATATGGGAAAGATTTCAAAGGAGGCATCCCTACTGGTCGGTTTTGCAATGGAAAAGTTCCATCAGACTATATAGTTGAAGCATTGGGAATTAAGGAATTTCTGCCGGCGTATTTGGATCCAAATATCCAACCTAGCGATCTTGTCACAGGTGTTTGCTTTGCATCCGGTGGTTCCGGGTATGATCCACTCACATCCAAAACTGCGTCAGCTATATCCTTGTCCGGTCAAATAGATTTGTTCAAAGAATACATAGGAAAGCTCAAAGGAATTGTTGGAGAGGGTAGAAAAAATTTCATCCTAGCCAACAGTGTTTTCCTTGTGGTTCAAGGAAGTAACGACATTTCCAATACATATTTTTTGAGCCATCTTAGAGAACTACAATATGATGTTCCTTCTTACACTGACCTCATGGTCGCCTCTGCTTCCAATTTCTTAAAGGAAATATATCAACTGGGTGCAAGGAGGATAGGAGTATTAAGTGTTCCACCAATTGGGTGTGTGCCATTTCAGAGAACGGTTGTTGGAGGAATTGAAAGAAAATGTTATAAAGTCGTTGACAAAGGATGTTGTGGCACAGGAGCAGTAGAGGTAGCAGTGTTATGCAACCAATTTGCTATCCAATGTGAAGATGTTAGGGACTACGTTTTCTGGGACAGTTTTCATCCCTCGGAGAGTGTTTACAGCAAGCTCTTAAATCCTCTTCTTCGAAAATATATACACCAGTTCTTCTAG
Protein sequence

>Msa0523000

MCSLMICFFILLGVISYTTKASLATLVLPPNVSFPAVFVFGDSIMDTGNNNNNMKTYARCNFLPYGKDFKGGIPTGRFCNGKVPSDYIVEALGIKEFLPAYLDPNIQPSDLVTGVCFASGGSGYDPLTSKTASAISLSGQIDLFKEYIGKLKGIVGEGRKNFILANSVFLVVQGSNDISNTYFLSHLRELQYDVPSYTDLMVASASNFLKEIYQLGARRIGVLSVPPIGCVPFQRTVVGGIERKCYKVVDKGCCGTGAVEVAVLCNQFAIQCEDVRDYVFWDSFHPSESVYSKLLNPLLRKYIHQFF*