AlfalfaGEDB | Msa1116440

M. sativa cultivar zhongmu-4 / Msa1116440

KEGG: -
GO: -
PFAM: PF08879.13

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1116440	XP_003625273.1	88.012	342	31	6	1	336	1	338	0.0	555

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1116440	G7KVE9	88.012	342	31	6	1	336	1	338	0.0	555

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0046010	Msa1116440	-0.813273	2.782241e-51	-8.615850e-47
Msa0050380	Msa1116440	0.813035	3.137709e-51	-8.615850e-47
Msa0090280	Msa1116440	-0.810457	1.141626e-50	-8.615850e-47
Msa0101810	Msa1116440	-0.856793	2.530767e-62	-8.615850e-47
Msa0612930	Msa1116440	0.823846	1.111514e-53	-8.615850e-47
Msa0626090	Msa1116440	0.840027	1.113295e-57	-8.615850e-47
Msa0638930	Msa1116440	-0.842051	3.273766e-58	-8.615850e-47
Msa0657970	Msa1116440	0.814848	1.249806e-51	-8.615850e-47
Msa0658570	Msa1116440	0.817425	3.319412e-52	-8.615850e-47
Msa0662650	Msa1116440	0.808522	2.971825e-50	-8.615850e-47
Msa0672690	Msa1116440	0.806163	9.397826e-50	-8.615850e-47
Msa0698930	Msa1116440	0.825379	4.840844e-54	-8.615850e-47
Msa0708860	Msa1116440	0.814424	1.551860e-51	-8.615850e-47
Msa0724210	Msa1116440	0.806510	7.941974e-50	-8.615850e-47
Msa0731940	Msa1116440	0.824384	8.312899e-54	-8.615850e-47
Msa0744170	Msa1116440	-0.818355	2.047039e-52	-8.615850e-47
Msa0777930	Msa1116440	0.802048	6.747826e-49	-8.615850e-47
Msa0794510	Msa1116440	-0.808124	3.613175e-50	-8.615850e-47
Msa0802470	Msa1116440	-0.822651	2.113282e-53	-8.615850e-47
Msa0810220	Msa1116440	0.850898	1.260300e-60	-8.615850e-47
Msa0828540	Msa1116440	0.808392	3.168410e-50	-8.615850e-47
Msa0838930	Msa1116440	0.802021	6.836673e-49	-8.615850e-47
Msa0133980	Msa1116440	-0.824820	6.560308e-54	-8.615850e-47
Msa0147250	Msa1116440	0.825422	4.727800e-54	-8.615850e-47
Msa0215320	Msa1116440	-0.817297	3.547991e-52	-8.615850e-47
Msa0220580	Msa1116440	0.806358	8.551310e-50	-8.615850e-47
Msa0376590	Msa1116440	0.829764	4.288882e-55	-8.615850e-47
Msa0381620	Msa1116440	-0.823360	1.444678e-53	-8.615850e-47
Msa0406880	Msa1116440	0.807716	4.412231e-50	-8.615850e-47
Msa0436370	Msa1116440	0.825524	4.473490e-54	-8.615850e-47
Msa0437830	Msa1116440	-0.810120	1.349595e-50	-8.615850e-47
Msa0443260	Msa1116440	0.814591	1.424942e-51	-8.615850e-47
Msa0466390	Msa1116440	0.830001	3.755037e-55	-8.615850e-47
Msa0990960	Msa1116440	0.806753	7.058277e-50	-8.615850e-47
Msa1007150	Msa1116440	-0.807028	6.173281e-50	-8.615850e-47
Msa1014540	Msa1116440	0.806788	6.938208e-50	-8.615850e-47
Msa1015730	Msa1116440	0.832296	1.025035e-55	-8.615850e-47
Msa1015790	Msa1116440	0.826316	2.900279e-54	-8.615850e-47
Msa1030970	Msa1116440	0.811020	8.626935e-51	-8.615850e-47
Msa1035300	Msa1116440	0.826703	2.344896e-54	-8.615850e-47
Msa1035310	Msa1116440	0.962343	9.153246e-121	-8.615850e-47
Msa1041730	Msa1116440	0.802684	4.991910e-49	-8.615850e-47
Msa1045200	Msa1116440	0.829983	3.792197e-55	-8.615850e-47
Msa1059570	Msa1116440	0.808711	2.708218e-50	-8.615850e-47
Msa1065490	Msa1116440	0.805015	1.636664e-49	-8.615850e-47
Msa1065540	Msa1116440	0.801483	8.816838e-49	-8.615850e-47
Msa1068200	Msa1116440	-0.822117	2.812754e-53	-8.615850e-47
Msa1070010	Msa1116440	0.810807	9.590683e-51	-8.615850e-47
Msa1075080	Msa1116440	-0.837975	3.785364e-57	-8.615850e-47
Msa1075220	Msa1116440	-0.833237	5.984074e-56	-8.615850e-47
Msa1082500	Msa1116440	0.813677	2.268035e-51	-8.615850e-47
Msa1082580	Msa1116440	0.801517	8.673476e-49	-8.615850e-47
Msa1084260	Msa1116440	0.820739	5.849203e-53	-8.615850e-47
Msa1085300	Msa1116440	0.800972	1.121254e-48	-8.615850e-47
Msa0249560	Msa1116440	0.821783	3.360419e-53	-8.615850e-47
Msa0255550	Msa1116440	0.807645	4.567517e-50	-8.615850e-47
Msa0258760	Msa1116440	0.821405	4.109848e-53	-8.615850e-47
Msa0266690	Msa1116440	0.816451	5.492689e-52	-8.615850e-47
Msa0269450	Msa1116440	0.800270	1.559366e-48	-8.615850e-47
Msa0285170	Msa1116440	0.808018	3.806702e-50	-8.615850e-47
Msa0287650	Msa1116440	0.801981	6.965695e-49	-8.615850e-47
Msa0288100	Msa1116440	0.824033	1.004777e-53	-8.615850e-47
Msa0294590	Msa1116440	0.816198	6.256119e-52	-8.615850e-47
Msa0305700	Msa1116440	0.805300	1.426899e-49	-8.615850e-47
Msa0323080	Msa1116440	0.821753	3.414636e-53	-8.615850e-47
Msa0326520	Msa1116440	0.819505	1.121539e-52	-8.615850e-47
Msa0350990	Msa1116440	0.807354	5.265376e-50	-8.615850e-47
Msa0351030	Msa1116440	0.809411	1.917680e-50	-8.615850e-47
Msa0351100	Msa1116440	0.825670	4.129610e-54	-8.615850e-47
Msa0354800	Msa1116440	-0.840067	1.086670e-57	-8.615850e-47
Msa1116440	Msa1116450	0.818122	2.311219e-52	-8.615850e-47
Msa1116440	Msa1137570	0.806278	8.890874e-50	-8.615850e-47
Msa1116440	Msa1139000	-0.806964	6.369517e-50	-8.615850e-47
Msa1116440	Msa1152440	0.800772	1.232108e-48	-8.615850e-47
Msa1116440	Msa1156340	-0.816895	4.368030e-52	-8.615850e-47
Msa1116440	Msa1158310	0.810825	9.507509e-51	-8.615850e-47
Msa1116440	Msa1162550	-0.812461	4.190080e-51	-8.615850e-47
Msa1116440	Msa1167220	0.809674	1.683829e-50	-8.615850e-47
Msa1116440	Msa1221700	0.811335	7.369708e-51	-8.615850e-47
Msa1116440	Msa1229600	0.830811	2.380149e-55	-8.615850e-47
Msa1116440	Msa1238930	0.822863	1.886956e-53	-8.615850e-47
Msa1116440	Msa1284680	0.805084	1.583296e-49	-8.615850e-47
Msa1116440	Msa1291660	0.823380	1.429096e-53	-8.615850e-47
Msa1116440	Msa1310210	0.807169	5.764820e-50	-8.615850e-47
Msa1116440	Msa1310700	0.800277	1.554311e-48	-8.615850e-47
Msa1116440	Msa1322860	0.800082	1.703089e-48	-8.615850e-47
Msa1116440	Msa1322890	0.812996	3.200510e-51	-8.615850e-47
Msa1116440	Msa1372760	0.810382	1.184957e-50	-8.615850e-47
Msa1116440	Msa1376890	0.817541	3.125761e-52	-8.615850e-47
Msa1116440	Msa1378760	0.816204	6.239072e-52	-8.615850e-47
Msa1116440	Msa1379850	0.825881	3.679654e-54	-8.615850e-47
Msa1116440	Msa1392260	0.805077	1.588657e-49	-8.615850e-47
Msa1116440	Msa1393410	0.840884	6.643904e-58	-8.615850e-47
Msa1116440	Msa1397610	0.805978	1.028000e-49	-8.615850e-47
Msa1116440	Msa1417360	-0.811854	5.685728e-51	-8.615850e-47
Msa1116440	Msa1423880	0.800479	1.413740e-48	-8.615850e-47
Msa1116440	Msa1435420	0.838132	3.449004e-57	-8.615850e-47
Msa1116440	Msa1451620	-0.844810	6.001914e-59	-8.615850e-47
Msa0484780	Msa1116440	0.812429	4.259195e-51	-8.615850e-47
Msa0492870	Msa1116440	0.808009	3.823507e-50	-8.615850e-47
Msa0492880	Msa1116440	0.818410	1.989347e-52	-8.615850e-47
Msa0516370	Msa1116440	0.830436	2.940509e-55	-8.615850e-47
Msa0532350	Msa1116440	0.815615	8.444280e-52	-8.615850e-47
Msa0533070	Msa1116440	0.815290	9.973287e-52	-8.615850e-47
Msa0536220	Msa1116440	0.816044	6.772417e-52	-8.615850e-47
Msa0548280	Msa1116440	-0.835321	1.796590e-56	-8.615850e-47
Msa0566500	Msa1116440	-0.803898	2.797969e-49	-8.615850e-47
Msa0572420	Msa1116440	0.823756	1.167054e-53	-8.615850e-47
Msa0572480	Msa1116440	0.814922	1.203742e-51	-8.615850e-47
Msa0585230	Msa1116440	0.802292	6.013616e-49	-8.615850e-47
Msa0843780	Msa1116440	-0.833211	6.073347e-56	-8.615850e-47
Msa0870530	Msa1116440	0.826902	2.101703e-54	-8.615850e-47
Msa0891040	Msa1116440	0.801858	7.382591e-49	-8.615850e-47
Msa0903700	Msa1116440	0.832516	9.041623e-56	-8.615850e-47
Msa0907070	Msa1116440	0.819893	9.145252e-53	-8.615850e-47
Msa0922410	Msa1116440	0.804521	2.075510e-49	-8.615850e-47
Msa0927290	Msa1116440	0.813379	2.637068e-51	-8.615850e-47
Msa0931520	Msa1116440	0.809171	2.159168e-50	-8.615850e-47
Msa0936210	Msa1116440	0.814327	1.630422e-51	-8.615850e-47
Msa0947040	Msa1116440	0.800536	1.376265e-48	-8.615850e-47
Msa0947080	Msa1116440	0.806425	8.277557e-50	-8.615850e-47
Msa0947100	Msa1116440	0.802988	4.320103e-49	-8.615850e-47
Msa0947230	Msa1116440	0.805678	1.188614e-49	-8.615850e-47
Msa0973150	Msa1116440	0.810005	1.429289e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1116440	MtrunA17_Chr7g0258791	88.012	342	31	6	1	336	1	338	0.0	555
Msa1116440	MtrunA17_Chr7g0258801	80.636	346	53	6	1	336	1	342	9.34e-171	478
Msa1116440	MtrunA17_Chr1g0175521	45.404	359	129	15	1	336	1	315	3.02e-71	224

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1116440	AT2G42040.1	32.317	328	133	12	1	325	1	242	2.91e-20	89.4

Find 91 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCTAGAATTTGTATTATTT+TGG	0.128512	7_3:-63996309	Msa1116440:three_prime_UTR
CTTAAGCTTGTGCTTTATTT+TGG	0.158870	7_3:-63996248	Msa1116440:three_prime_UTR
TCACTTTGTGAGCATCATTT+AGG	0.197238	7_3:-63996677	Msa1116440:CDS
CCGTTCTATGATCAGCTTAT+TGG	0.203642	7_3:-63996438	Msa1116440:CDS
GATGAATAAGAAGTGTTCTT+TGG	0.231101	7_3:-63996849	Msa1116440:CDS
CACTTTGTGAGCATCATTTA+GGG	0.276622	7_3:-63996676	Msa1116440:CDS
CGTTCTATGATCAGCTTATT+GGG	0.299498	7_3:-63996437	Msa1116440:CDS
TCAAGGTGCAGTCGTGTTAA+TGG	0.325264	7_3:-63996740	Msa1116440:CDS
GCACTATCAACAACATTGTT+TGG	0.330075	7_3:+63996587	None:intergenic
CAAGCTTAAGTTTAATATAT+AGG	0.341939	7_3:+63996261	None:intergenic
TTAGAAAAGAAAGGATCTTT+TGG	0.346137	7_3:+63998291	None:intergenic
AAGGTTTGAGAGTATTTGTA+TGG	0.347822	7_3:-63996903	Msa1116440:CDS
ATGAATAAGAAGTGTTCTTT+GGG	0.357582	7_3:-63996848	Msa1116440:CDS
GTATGACAAGTGTTAGAAAT+AGG	0.358142	7_3:-63996637	Msa1116440:CDS
GTGCAGGATAAGAAAGTTAG+AGG	0.360493	7_3:-63997642	Msa1116440:intron
AGTGTTAGAAATAGGTCTAT+TGG	0.377534	7_3:-63996629	Msa1116440:CDS
ATTATTATTACATGTATTTG+AGG	0.396971	7_3:-63996351	Msa1116440:three_prime_UTR
GCTCAACAAGCTAGATCCTT+TGG	0.399719	7_3:-63997913	Msa1116440:intron
CTCTTCTTTGCAATTACCAC+TGG	0.403988	7_3:+63996485	None:intergenic
GATTGTGAAGAACAAGGTTT+TGG	0.415228	7_3:+63998068	None:intergenic
TTCCCATGTAGTAGACTAGA+TGG	0.415477	7_3:-63998384	Msa1116440:five_prime_UTR
TCTTAGCAAAGGAGATATCT+TGG	0.419473	7_3:-63997153	Msa1116440:intron
AGACTTTGTTTAGAAAAGAA+AGG	0.444952	7_3:+63998282	None:intergenic
AAACTATTCCCTTAAAGAAA+AGG	0.452186	7_3:-63996931	Msa1116440:CDS
TGTTGTCAACAAACACTTGT+TGG	0.452218	7_3:-63996704	Msa1116440:CDS
ATCAAACACTCCCACTGATC+GGG	0.459647	7_3:-63997995	Msa1116440:CDS
TGTTTCAGCTGGTTTGAGCT+TGG	0.461697	7_3:-63998036	Msa1116440:CDS
GTAACAAAAGTAATCATTCC+AGG	0.470312	7_3:-63997587	Msa1116440:intron
AGAAAAGAACTTGTCTCTTA+CGG	0.470316	7_3:+63998180	None:intergenic
CAATAAGCTGATCATAGAAC+GGG	0.471766	7_3:+63996439	None:intergenic
GTATGATAATGATGATAAGT+TGG	0.476297	7_3:-63996528	Msa1116440:CDS
CCGGTGAGGGGTTGAACTGG+TGG	0.479353	7_3:+63998117	None:intergenic
AACGGCCACGATTATCCATC+TGG	0.480114	7_3:-63997963	Msa1116440:CDS
TGTTGCACCATCACCGGTGA+GGG	0.489800	7_3:+63998104	None:intergenic
TCACCGGTGAGGGGTTGAAC+TGG	0.493367	7_3:+63998114	None:intergenic
AAAAGTGAATATTAAGAAGA+AGG	0.494609	7_3:-63996795	Msa1116440:CDS
CGGTGAGGGGTTGAACTGGT+GGG	0.499745	7_3:+63998118	None:intergenic
TGCAGTCGTGTTAATGGAAG+AGG	0.503807	7_3:-63996734	Msa1116440:CDS
TCACAAGAACATGTTTCAGC+TGG	0.509741	7_3:-63998047	Msa1116440:CDS
CCATCTGGTGTTGAGGAAAG+TGG	0.511043	7_3:-63997948	Msa1116440:CDS
TGTTTAGTTTCCCGATCAGT+GGG	0.515803	7_3:+63997985	None:intergenic
TTGTTTAGTTTCCCGATCAG+TGG	0.522558	7_3:+63997984	None:intergenic
TCCCATGTAGTAGACTAGAT+GGG	0.523263	7_3:-63998383	Msa1116440:five_prime_UTR
TGCAGGATAAGAAAGTTAGA+GGG	0.523657	7_3:-63997641	Msa1116440:intron
CATCTGGTGTTGAGGAAAGT+GGG	0.525658	7_3:-63997947	Msa1116440:CDS
GTGCACTGATGGAAGGTTCA+AGG	0.526939	7_3:-63996757	Msa1116440:CDS
CCTTAAAGAAAAGGAAAGGA+AGG	0.528253	7_3:-63996922	Msa1116440:CDS
TCAGCAAAAGTGCTTGATGA+TGG	0.536908	7_3:+63997113	None:intergenic
GATCAAACACTCCCACTGAT+CGG	0.538484	7_3:-63997996	Msa1116440:CDS
TGTGAGCATCATTTAGGGAA+AGG	0.539369	7_3:-63996671	Msa1116440:CDS
GTTCAACCCCTCACCGGTGA+TGG	0.545053	7_3:-63998111	Msa1116440:CDS
ATATGTATGTAGATGAGATA+TGG	0.545540	7_3:-63996967	Msa1116440:intron
CCACCTTGTTGCACCATCAC+CGG	0.551310	7_3:+63998098	None:intergenic
ATGGTGCAACAAGGTGGTGA+TGG	0.554086	7_3:-63998092	Msa1116440:CDS
GAGAGTGATGACTCAGGAGG+AGG	0.565184	7_3:-63997609	Msa1116440:CDS
GTAGATGAGATATGGTTGGA+GGG	0.566652	7_3:-63996959	Msa1116440:intron
AGTGGGAGTGTTTGATCAGA+CGG	0.568378	7_3:+63998002	None:intergenic
GAGAAAGAGAGTGATGACTC+AGG	0.568610	7_3:-63997615	Msa1116440:CDS
CCACTTTCCTCAACACCAGA+TGG	0.569127	7_3:+63997948	None:intergenic
GCAAAGAAGAGAATGAAGCT+TGG	0.570809	7_3:-63996473	Msa1116440:CDS
TAATGATAGTAAGAAAGTGA+AGG	0.575995	7_3:-63996876	Msa1116440:CDS
CGATTATCCATCTGGTGTTG+AGG	0.577936	7_3:-63997955	Msa1116440:CDS
CCACCAGTTCAACCCCTCAC+CGG	0.579734	7_3:-63998117	Msa1116440:CDS
CCCCATCTAGTCTACTACAT+GGG	0.580219	7_3:+63998382	None:intergenic
AGAGGAAGTGCACTGATGGA+AGG	0.580937	7_3:-63996764	Msa1116440:CDS
GCAGGATAAGAAAGTTAGAG+GGG	0.582694	7_3:-63997640	Msa1116440:intron
TTGTTGCACCATCACCGGTG+AGG	0.588122	7_3:+63998103	None:intergenic
ATTCCCTTAAAGAAAAGGAA+AGG	0.593366	7_3:-63996926	Msa1116440:CDS
TGTAGATGAGATATGGTTGG+AGG	0.593724	7_3:-63996960	Msa1116440:intron
CCAATAAGCTGATCATAGAA+CGG	0.594866	7_3:+63996438	None:intergenic
TGTCTCTTACGGATCCTCAT+CGG	0.600026	7_3:+63998191	None:intergenic
GTGTTAATGGAAGAGGATGG+AGG	0.605411	7_3:-63996727	Msa1116440:CDS
TCTTCAATCTTGCACCGATG+AGG	0.606995	7_3:-63998205	Msa1116440:exon
CCCATGTAGTAGACTAGATG+GGG	0.608690	7_3:-63998382	Msa1116440:five_prime_UTR
ACCCCATCTAGTCTACTACA+TGG	0.611435	7_3:+63998381	None:intergenic
GGTGAGGGGTTGAACTGGTG+GGG	0.616274	7_3:+63998119	None:intergenic
TCACCGGTGATGGTGCAACA+AGG	0.624923	7_3:-63998101	Msa1116440:CDS
GTATGTAGATGAGATATGGT+TGG	0.625920	7_3:-63996963	Msa1116440:intron
GTTGCACCATCACCGGTGAG+GGG	0.629689	7_3:+63998105	None:intergenic
GGATCTGAGAGATGCAAAGG+TGG	0.632138	7_3:+63998140	None:intergenic
ATCTGGTGTTGAGGAAAGTG+GGG	0.633423	7_3:-63997946	Msa1116440:CDS
GAGAGAGAAAGTAACTCGTG+TGG	0.637546	7_3:-63998470	None:intergenic
TGGGGATCTGAGAGATGCAA+AGG	0.640436	7_3:+63998137	None:intergenic
ATTGGGACAGACAGACAACA+AGG	0.664244	7_3:-63996420	Msa1116440:CDS
AAAGAGAGTGATGACTCAGG+AGG	0.667744	7_3:-63997612	Msa1116440:CDS
TCTTGTGATTGTGAAGAACA+AGG	0.674329	7_3:+63998062	None:intergenic
GTCGTGTTAATGGAAGAGGA+TGG	0.680449	7_3:-63996730	Msa1116440:CDS
CTGATCGGGAAACTAAACAA+CGG	0.709639	7_3:-63997981	Msa1116440:CDS
TGATGATGAGAAGAAGCCAG+TGG	0.711853	7_3:-63996501	Msa1116440:CDS
CAACACCAGATGGATAATCG+TGG	0.715637	7_3:+63997958	None:intergenic
CCGGTGATGGTGCAACAAGG+TGG	0.766194	7_3:-63998098	Msa1116440:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAGAATAATAAAATCAAAA+TGG	+	chr7_3:63996767-63996786	None:intergenic	10.0%
!!	TTTATTTATAATTATACCAT+TGG	-	chr7_3:63997180-63997199	Msa1116440:intron	10.0%
!!!	ATAATTTTATTGTAATCTTT+CGG	+	chr7_3:63998275-63998294	None:intergenic	10.0%
!!	TAAGAATAATAAAATCAAAA+TGG	+	chr7_3:63996767-63996786	None:intergenic	10.0%
!!	TTTATTTATAATTATACCAT+TGG	-	chr7_3:63997180-63997199	Msa1116440:intron	10.0%
!!!	ATAATTTTATTGTAATCTTT+CGG	+	chr7_3:63998275-63998294	None:intergenic	10.0%
!!!	CATATATAACTTTTTTTTCT+TGG	-	chr7_3:63996231-63996250	Msa1116440:three_prime_UTR	15.0%
!!!	TTTTTTTAGATTTCATGATT+TGG	-	chr7_3:63996837-63996856	Msa1116440:CDS	15.0%
!!!	TTTTTTAGATTTCATGATTT+GGG	-	chr7_3:63996838-63996857	Msa1116440:CDS	15.0%
!!	ATTATTATTACATGTATTTG+AGG	-	chr7_3:63998290-63998309	Msa1116440:five_prime_UTR	15.0%
!!!	CATATATAACTTTTTTTTCT+TGG	-	chr7_3:63996231-63996250	Msa1116440:three_prime_UTR	15.0%
!!!	TTTTTTTAGATTTCATGATT+TGG	-	chr7_3:63996837-63996856	Msa1116440:CDS	15.0%
!!!	TTTTTTAGATTTCATGATTT+GGG	-	chr7_3:63996838-63996857	Msa1116440:CDS	15.0%
!!	ATTATTATTACATGTATTTG+AGG	-	chr7_3:63998290-63998309	Msa1116440:five_prime_UTR	15.0%
!!!	TAAAATCAAAATGGTTTGTT+TGG	+	chr7_3:63996758-63996777	None:intergenic	20.0%
!!!	TACATTAAAACCATGTATTT+TGG	-	chr7_3:63996960-63996979	Msa1116440:intron	20.0%
!!	GAAAGAATAAGATAGAAAAA+AGG	+	chr7_3:63997102-63997121	None:intergenic	20.0%
!!!	AAAAAGCACAATTTTCTTTT+TGG	+	chr7_3:63997162-63997181	None:intergenic	20.0%
!!!	ATGAAATTTAGAGCATATAA+GGG	+	chr7_3:63997433-63997452	None:intergenic	20.0%
!!!	TATGTAATTTTTTGTCTTTC+TGG	-	chr7_3:63997454-63997473	Msa1116440:intron	20.0%
!!!	ATGTAATTTTTTGTCTTTCT+GGG	-	chr7_3:63997455-63997474	Msa1116440:intron	20.0%
!!	AAAAGTGAATATTAAGAAGA+AGG	-	chr7_3:63997846-63997865	Msa1116440:intron	20.0%
!!!	TGCTAGAATTTGTATTATTT+TGG	-	chr7_3:63998332-63998351	Msa1116440:five_prime_UTR	20.0%
!!	CAAGCTTAAGTTTAATATAT+AGG	+	chr7_3:63998383-63998402	None:intergenic	20.0%
!!!	TAAAATCAAAATGGTTTGTT+TGG	+	chr7_3:63996758-63996777	None:intergenic	20.0%
!!!	TACATTAAAACCATGTATTT+TGG	-	chr7_3:63996960-63996979	Msa1116440:intron	20.0%
!!	GAAAGAATAAGATAGAAAAA+AGG	+	chr7_3:63997102-63997121	None:intergenic	20.0%
!!!	AAAAAGCACAATTTTCTTTT+TGG	+	chr7_3:63997162-63997181	None:intergenic	20.0%
!!!	ATGAAATTTAGAGCATATAA+GGG	+	chr7_3:63997433-63997452	None:intergenic	20.0%
!!!	TATGTAATTTTTTGTCTTTC+TGG	-	chr7_3:63997454-63997473	Msa1116440:intron	20.0%
!!!	ATGTAATTTTTTGTCTTTCT+GGG	-	chr7_3:63997455-63997474	Msa1116440:intron	20.0%
!!	AAAAGTGAATATTAAGAAGA+AGG	-	chr7_3:63997846-63997865	Msa1116440:intron	20.0%
!!!	TGCTAGAATTTGTATTATTT+TGG	-	chr7_3:63998332-63998351	Msa1116440:five_prime_UTR	20.0%
!!	CAAGCTTAAGTTTAATATAT+AGG	+	chr7_3:63998383-63998402	None:intergenic	20.0%
!!	TTTTGTGTGTCTCTATATAT+TGG	+	chr7_3:63996199-63996218	None:intergenic	25.0%
!!	TTAGAAAAGAAAGGATCTTT+TGG	+	chr7_3:63996353-63996372	None:intergenic	25.0%
!!	AGACTTTGTTTAGAAAAGAA+AGG	+	chr7_3:63996362-63996381	None:intergenic	25.0%
!!!	AATTATTTTACACCCAGAAA+GGG	-	chr7_3:63996933-63996952	Msa1116440:CDS	25.0%
!!!	TAAAACCATGTATTTTGGTA+TGG	-	chr7_3:63996965-63996984	Msa1116440:intron	25.0%
!!	TTCAACAGTATATTTTCCAA+TGG	+	chr7_3:63997199-63997218	None:intergenic	25.0%
!	ATTGGAAAATATACTGTTGA+AGG	-	chr7_3:63997198-63997217	Msa1116440:intron	25.0%
!!!	ATTTTAGAGAAAAGAAGGAT+GGG	+	chr7_3:63997282-63997301	None:intergenic	25.0%
!!!	TATTTTAGAGAAAAGAAGGA+TGG	+	chr7_3:63997283-63997302	None:intergenic	25.0%
!!!	ATCCTTCTTTTCTCTAAAAT+AGG	-	chr7_3:63997282-63997301	Msa1116440:intron	25.0%
!!!	TACCTATTTTAGAGAAAAGA+AGG	+	chr7_3:63997287-63997306	None:intergenic	25.0%
!	ACAAAGTGCAATATATAGAT+GGG	+	chr7_3:63997354-63997373	None:intergenic	25.0%
!	AACAAAGTGCAATATATAGA+TGG	+	chr7_3:63997355-63997374	None:intergenic	25.0%
!!	CATGAAATTTAGAGCATATA+AGG	+	chr7_3:63997434-63997453	None:intergenic	25.0%
!	ATATGTATGTAGATGAGATA+TGG	-	chr7_3:63997674-63997693	Msa1116440:intron	25.0%
!	AAACTATTCCCTTAAAGAAA+AGG	-	chr7_3:63997710-63997729	Msa1116440:intron	25.0%
!	TAATGATAGTAAGAAAGTGA+AGG	-	chr7_3:63997765-63997784	Msa1116440:intron	25.0%
!!!	ATGAATAAGAAGTGTTCTTT+GGG	-	chr7_3:63997793-63997812	Msa1116440:intron	25.0%
!!	GTATGATAATGATGATAAGT+TGG	-	chr7_3:63998113-63998132	Msa1116440:CDS	25.0%
!!	TTTTGTGTGTCTCTATATAT+TGG	+	chr7_3:63996199-63996218	None:intergenic	25.0%
!!	TTAGAAAAGAAAGGATCTTT+TGG	+	chr7_3:63996353-63996372	None:intergenic	25.0%
!!	AGACTTTGTTTAGAAAAGAA+AGG	+	chr7_3:63996362-63996381	None:intergenic	25.0%
!!!	AATTATTTTACACCCAGAAA+GGG	-	chr7_3:63996933-63996952	Msa1116440:CDS	25.0%
!!!	TAAAACCATGTATTTTGGTA+TGG	-	chr7_3:63996965-63996984	Msa1116440:intron	25.0%
!!	TTCAACAGTATATTTTCCAA+TGG	+	chr7_3:63997199-63997218	None:intergenic	25.0%
!	ATTGGAAAATATACTGTTGA+AGG	-	chr7_3:63997198-63997217	Msa1116440:intron	25.0%
!!!	ATTTTAGAGAAAAGAAGGAT+GGG	+	chr7_3:63997282-63997301	None:intergenic	25.0%
!!!	TATTTTAGAGAAAAGAAGGA+TGG	+	chr7_3:63997283-63997302	None:intergenic	25.0%
!!!	ATCCTTCTTTTCTCTAAAAT+AGG	-	chr7_3:63997282-63997301	Msa1116440:intron	25.0%
!!!	TACCTATTTTAGAGAAAAGA+AGG	+	chr7_3:63997287-63997306	None:intergenic	25.0%
!	ACAAAGTGCAATATATAGAT+GGG	+	chr7_3:63997354-63997373	None:intergenic	25.0%
!	AACAAAGTGCAATATATAGA+TGG	+	chr7_3:63997355-63997374	None:intergenic	25.0%
!!	CATGAAATTTAGAGCATATA+AGG	+	chr7_3:63997434-63997453	None:intergenic	25.0%
!	ATATGTATGTAGATGAGATA+TGG	-	chr7_3:63997674-63997693	Msa1116440:intron	25.0%
!	AAACTATTCCCTTAAAGAAA+AGG	-	chr7_3:63997710-63997729	Msa1116440:intron	25.0%
!	TAATGATAGTAAGAAAGTGA+AGG	-	chr7_3:63997765-63997784	Msa1116440:intron	25.0%
!!!	ATGAATAAGAAGTGTTCTTT+GGG	-	chr7_3:63997793-63997812	Msa1116440:intron	25.0%
!!	GTATGATAATGATGATAAGT+TGG	-	chr7_3:63998113-63998132	Msa1116440:CDS	25.0%
	AGAAAAGAACTTGTCTCTTA+CGG	+	chr7_3:63996464-63996483	None:intergenic	30.0%
!!	GAATTATTTTACACCCAGAA+AGG	-	chr7_3:63996932-63996951	Msa1116440:CDS	30.0%
	TTAATGTAAGAACCCTTTCT+GGG	+	chr7_3:63996948-63996967	None:intergenic	30.0%
	TTTAATGTAAGAACCCTTTC+TGG	+	chr7_3:63996949-63996968	None:intergenic	30.0%
	ATCAACCATACCAAAATACA+TGG	+	chr7_3:63996973-63996992	None:intergenic	30.0%
	GTAACAAAAGTAATCATTCC+AGG	-	chr7_3:63997054-63997073	Msa1116440:intron	30.0%
!!	ACAATTTTCTTTTTGGAAGC+TGG	+	chr7_3:63997155-63997174	None:intergenic	30.0%
	CAAAGTGCAATATATAGATG+GGG	+	chr7_3:63997353-63997372	None:intergenic	30.0%
	TGAGTGTAACATTATTGTTG+AGG	+	chr7_3:63997378-63997397	None:intergenic	30.0%
	TATATATTGCTTTGTGAGCA+TGG	-	chr7_3:63997629-63997648	Msa1116440:CDS	30.0%
	ATTCCCTTAAAGAAAAGGAA+AGG	-	chr7_3:63997715-63997734	Msa1116440:intron	30.0%
!	CTTCCTTTCCTTTTCTTTAA+GGG	+	chr7_3:63997721-63997740	None:intergenic	30.0%
!!	AAGGTTTGAGAGTATTTGTA+TGG	-	chr7_3:63997738-63997757	Msa1116440:intron	30.0%
!!	GATGAATAAGAAGTGTTCTT+TGG	-	chr7_3:63997792-63997811	Msa1116440:intron	30.0%
	GTATGACAAGTGTTAGAAAT+AGG	-	chr7_3:63998004-63998023	Msa1116440:CDS	30.0%
	AGTGTTAGAAATAGGTCTAT+TGG	-	chr7_3:63998012-63998031	Msa1116440:CDS	30.0%
!!!	CTTAAGCTTGTGCTTTATTT+TGG	-	chr7_3:63998393-63998412	Msa1116440:five_prime_UTR	30.0%
	AGAAAAGAACTTGTCTCTTA+CGG	+	chr7_3:63996464-63996483	None:intergenic	30.0%
!!	GAATTATTTTACACCCAGAA+AGG	-	chr7_3:63996932-63996951	Msa1116440:CDS	30.0%
	TTAATGTAAGAACCCTTTCT+GGG	+	chr7_3:63996948-63996967	None:intergenic	30.0%
	TTTAATGTAAGAACCCTTTC+TGG	+	chr7_3:63996949-63996968	None:intergenic	30.0%
	ATCAACCATACCAAAATACA+TGG	+	chr7_3:63996973-63996992	None:intergenic	30.0%
	GTAACAAAAGTAATCATTCC+AGG	-	chr7_3:63997054-63997073	Msa1116440:intron	30.0%
!!	ACAATTTTCTTTTTGGAAGC+TGG	+	chr7_3:63997155-63997174	None:intergenic	30.0%
	CAAAGTGCAATATATAGATG+GGG	+	chr7_3:63997353-63997372	None:intergenic	30.0%
	TGAGTGTAACATTATTGTTG+AGG	+	chr7_3:63997378-63997397	None:intergenic	30.0%
	TATATATTGCTTTGTGAGCA+TGG	-	chr7_3:63997629-63997648	Msa1116440:CDS	30.0%
	ATTCCCTTAAAGAAAAGGAA+AGG	-	chr7_3:63997715-63997734	Msa1116440:intron	30.0%
!	CTTCCTTTCCTTTTCTTTAA+GGG	+	chr7_3:63997721-63997740	None:intergenic	30.0%
!!	AAGGTTTGAGAGTATTTGTA+TGG	-	chr7_3:63997738-63997757	Msa1116440:intron	30.0%
!!	GATGAATAAGAAGTGTTCTT+TGG	-	chr7_3:63997792-63997811	Msa1116440:intron	30.0%
	GTATGACAAGTGTTAGAAAT+AGG	-	chr7_3:63998004-63998023	Msa1116440:CDS	30.0%
	AGTGTTAGAAATAGGTCTAT+TGG	-	chr7_3:63998012-63998031	Msa1116440:CDS	30.0%
!!!	CTTAAGCTTGTGCTTTATTT+TGG	-	chr7_3:63998393-63998412	Msa1116440:five_prime_UTR	30.0%
!	GATTGTGAAGAACAAGGTTT+TGG	+	chr7_3:63996576-63996595	None:intergenic	35.0%
	TCTTGTGATTGTGAAGAACA+AGG	+	chr7_3:63996582-63996601	None:intergenic	35.0%
!!	TGGTTTGTTTGGTTTACCAA+AGG	+	chr7_3:63996747-63996766	None:intergenic	35.0%
!	ACTTTTGTCTAATCTCTTGC+TGG	-	chr7_3:63996875-63996894	Msa1116440:CDS	35.0%
!!	TATGGTTGATTTGATTGTGC+AGG	-	chr7_3:63996983-63997002	Msa1116440:intron	35.0%
	TGCAGGATAAGAAAGTTAGA+GGG	-	chr7_3:63997000-63997019	Msa1116440:intron	35.0%
!	AAAGAAGGATGGGCTTAATT+TGG	+	chr7_3:63997272-63997291	None:intergenic	35.0%
	TCTTAGCAAAGGAGATATCT+TGG	-	chr7_3:63997488-63997507	Msa1116440:intron	35.0%
	GTATGTAGATGAGATATGGT+TGG	-	chr7_3:63997678-63997697	Msa1116440:intron	35.0%
!	CCTTCCTTTCCTTTTCTTTA+AGG	+	chr7_3:63997722-63997741	None:intergenic	35.0%
	CCTTAAAGAAAAGGAAAGGA+AGG	-	chr7_3:63997719-63997738	Msa1116440:intron	35.0%
	AAGAAGAAGGTCACAAAAAG+AGG	-	chr7_3:63997859-63997878	Msa1116440:intron	35.0%
	TGTTGTCAACAAACACTTGT+TGG	-	chr7_3:63997937-63997956	Msa1116440:CDS	35.0%
	TCACTTTGTGAGCATCATTT+AGG	-	chr7_3:63997964-63997983	Msa1116440:CDS	35.0%
	CACTTTGTGAGCATCATTTA+GGG	-	chr7_3:63997965-63997984	Msa1116440:CDS	35.0%
	GCACTATCAACAACATTGTT+TGG	+	chr7_3:63998057-63998076	None:intergenic	35.0%
	CAATAAGCTGATCATAGAAC+GGG	+	chr7_3:63998205-63998224	None:intergenic	35.0%
	CCAATAAGCTGATCATAGAA+CGG	+	chr7_3:63998206-63998225	None:intergenic	35.0%
	CGTTCTATGATCAGCTTATT+GGG	-	chr7_3:63998204-63998223	Msa1116440:exon	35.0%
!	GATTGTGAAGAACAAGGTTT+TGG	+	chr7_3:63996576-63996595	None:intergenic	35.0%
	TCTTGTGATTGTGAAGAACA+AGG	+	chr7_3:63996582-63996601	None:intergenic	35.0%
!!	TGGTTTGTTTGGTTTACCAA+AGG	+	chr7_3:63996747-63996766	None:intergenic	35.0%
!	ACTTTTGTCTAATCTCTTGC+TGG	-	chr7_3:63996875-63996894	Msa1116440:CDS	35.0%
!!	TATGGTTGATTTGATTGTGC+AGG	-	chr7_3:63996983-63997002	Msa1116440:intron	35.0%
	TGCAGGATAAGAAAGTTAGA+GGG	-	chr7_3:63997000-63997019	Msa1116440:intron	35.0%
!	AAAGAAGGATGGGCTTAATT+TGG	+	chr7_3:63997272-63997291	None:intergenic	35.0%
	TCTTAGCAAAGGAGATATCT+TGG	-	chr7_3:63997488-63997507	Msa1116440:intron	35.0%
	GTATGTAGATGAGATATGGT+TGG	-	chr7_3:63997678-63997697	Msa1116440:intron	35.0%
!	CCTTCCTTTCCTTTTCTTTA+AGG	+	chr7_3:63997722-63997741	None:intergenic	35.0%
	CCTTAAAGAAAAGGAAAGGA+AGG	-	chr7_3:63997719-63997738	Msa1116440:intron	35.0%
	AAGAAGAAGGTCACAAAAAG+AGG	-	chr7_3:63997859-63997878	Msa1116440:intron	35.0%
	TGTTGTCAACAAACACTTGT+TGG	-	chr7_3:63997937-63997956	Msa1116440:CDS	35.0%
	TCACTTTGTGAGCATCATTT+AGG	-	chr7_3:63997964-63997983	Msa1116440:CDS	35.0%
	CACTTTGTGAGCATCATTTA+GGG	-	chr7_3:63997965-63997984	Msa1116440:CDS	35.0%
	GCACTATCAACAACATTGTT+TGG	+	chr7_3:63998057-63998076	None:intergenic	35.0%
	CAATAAGCTGATCATAGAAC+GGG	+	chr7_3:63998205-63998224	None:intergenic	35.0%
	CCAATAAGCTGATCATAGAA+CGG	+	chr7_3:63998206-63998225	None:intergenic	35.0%
	CGTTCTATGATCAGCTTATT+GGG	-	chr7_3:63998204-63998223	Msa1116440:exon	35.0%
	TTCCCATGTAGTAGACTAGA+TGG	-	chr7_3:63996257-63996276	Msa1116440:three_prime_UTR	40.0%
	TCCCATGTAGTAGACTAGAT+GGG	-	chr7_3:63996258-63996277	Msa1116440:three_prime_UTR	40.0%
	TCACAAGAACATGTTTCAGC+TGG	-	chr7_3:63996594-63996613	Msa1116440:CDS	40.0%
!	TGTTTAGTTTCCCGATCAGT+GGG	+	chr7_3:63996659-63996678	None:intergenic	40.0%
!	TTGTTTAGTTTCCCGATCAG+TGG	+	chr7_3:63996660-63996679	None:intergenic	40.0%
	CTGATCGGGAAACTAAACAA+CGG	-	chr7_3:63996660-63996679	Msa1116440:CDS	40.0%
	GTGCAGGATAAGAAAGTTAG+AGG	-	chr7_3:63996999-63997018	Msa1116440:intron	40.0%
	GCAGGATAAGAAAGTTAGAG+GGG	-	chr7_3:63997001-63997020	Msa1116440:intron	40.0%
	GTAATCATTCCAGGTGAGAA+TGG	-	chr7_3:63997063-63997082	Msa1116440:intron	40.0%
!	TAGCTACCATTTTGCACTTG+AGG	-	chr7_3:63997305-63997324	Msa1116440:intron	40.0%
	GGTGCACTACTAGTTATAAC+TGG	-	chr7_3:63997326-63997345	Msa1116440:intron	40.0%
!!	TCAGCAAAAGTGCTTGATGA+TGG	+	chr7_3:63997531-63997550	None:intergenic	40.0%
!	TCATCAAGCACTTTTGCTGA+AGG	-	chr7_3:63997531-63997550	Msa1116440:intron	40.0%
	TGTAGATGAGATATGGTTGG+AGG	-	chr7_3:63997681-63997700	Msa1116440:intron	40.0%
	GTAGATGAGATATGGTTGGA+GGG	-	chr7_3:63997682-63997701	Msa1116440:intron	40.0%
!	AAAAAGAGGAAGTGCACTGA+TGG	-	chr7_3:63997873-63997892	Msa1116440:intron	40.0%
	TGTGAGCATCATTTAGGGAA+AGG	-	chr7_3:63997970-63997989	Msa1116440:CDS	40.0%
	CTCTTCTTTGCAATTACCAC+TGG	+	chr7_3:63998159-63998178	None:intergenic	40.0%
	GCAAAGAAGAGAATGAAGCT+TGG	-	chr7_3:63998168-63998187	Msa1116440:CDS	40.0%
	CCGTTCTATGATCAGCTTAT+TGG	-	chr7_3:63998203-63998222	Msa1116440:exon	40.0%
	TTCCCATGTAGTAGACTAGA+TGG	-	chr7_3:63996257-63996276	Msa1116440:three_prime_UTR	40.0%
	TCCCATGTAGTAGACTAGAT+GGG	-	chr7_3:63996258-63996277	Msa1116440:three_prime_UTR	40.0%
	TCACAAGAACATGTTTCAGC+TGG	-	chr7_3:63996594-63996613	Msa1116440:CDS	40.0%
!	TGTTTAGTTTCCCGATCAGT+GGG	+	chr7_3:63996659-63996678	None:intergenic	40.0%
!	TTGTTTAGTTTCCCGATCAG+TGG	+	chr7_3:63996660-63996679	None:intergenic	40.0%
	CTGATCGGGAAACTAAACAA+CGG	-	chr7_3:63996660-63996679	Msa1116440:CDS	40.0%
	GTGCAGGATAAGAAAGTTAG+AGG	-	chr7_3:63996999-63997018	Msa1116440:intron	40.0%
	GCAGGATAAGAAAGTTAGAG+GGG	-	chr7_3:63997001-63997020	Msa1116440:intron	40.0%
	GTAATCATTCCAGGTGAGAA+TGG	-	chr7_3:63997063-63997082	Msa1116440:intron	40.0%
!	TAGCTACCATTTTGCACTTG+AGG	-	chr7_3:63997305-63997324	Msa1116440:intron	40.0%
	GGTGCACTACTAGTTATAAC+TGG	-	chr7_3:63997326-63997345	Msa1116440:intron	40.0%
!!	TCAGCAAAAGTGCTTGATGA+TGG	+	chr7_3:63997531-63997550	None:intergenic	40.0%
!	TCATCAAGCACTTTTGCTGA+AGG	-	chr7_3:63997531-63997550	Msa1116440:intron	40.0%
	TGTAGATGAGATATGGTTGG+AGG	-	chr7_3:63997681-63997700	Msa1116440:intron	40.0%
	GTAGATGAGATATGGTTGGA+GGG	-	chr7_3:63997682-63997701	Msa1116440:intron	40.0%
!	AAAAAGAGGAAGTGCACTGA+TGG	-	chr7_3:63997873-63997892	Msa1116440:intron	40.0%
	TGTGAGCATCATTTAGGGAA+AGG	-	chr7_3:63997970-63997989	Msa1116440:CDS	40.0%
	CTCTTCTTTGCAATTACCAC+TGG	+	chr7_3:63998159-63998178	None:intergenic	40.0%
	GCAAAGAAGAGAATGAAGCT+TGG	-	chr7_3:63998168-63998187	Msa1116440:CDS	40.0%
	CCGTTCTATGATCAGCTTAT+TGG	-	chr7_3:63998203-63998222	Msa1116440:exon	40.0%
	CCCCATCTAGTCTACTACAT+GGG	+	chr7_3:63996262-63996281	None:intergenic	45.0%
	CCCATGTAGTAGACTAGATG+GGG	-	chr7_3:63996259-63996278	Msa1116440:three_prime_UTR	45.0%
	ACCCCATCTAGTCTACTACA+TGG	+	chr7_3:63996263-63996282	None:intergenic	45.0%
!	TCTTCAATCTTGCACCGATG+AGG	-	chr7_3:63996436-63996455	Msa1116440:CDS	45.0%
	TGTCTCTTACGGATCCTCAT+CGG	+	chr7_3:63996453-63996472	None:intergenic	45.0%
!!	TGTTTCAGCTGGTTTGAGCT+TGG	-	chr7_3:63996605-63996624	Msa1116440:CDS	45.0%
!!	AGTGGGAGTGTTTGATCAGA+CGG	+	chr7_3:63996642-63996661	None:intergenic	45.0%
	GATCAAACACTCCCACTGAT+CGG	-	chr7_3:63996645-63996664	Msa1116440:CDS	45.0%
	ATCAAACACTCCCACTGATC+GGG	-	chr7_3:63996646-63996665	Msa1116440:CDS	45.0%
	CAACACCAGATGGATAATCG+TGG	+	chr7_3:63996686-63996705	None:intergenic	45.0%
!	CGATTATCCATCTGGTGTTG+AGG	-	chr7_3:63996686-63996705	Msa1116440:CDS	45.0%
!	CATCTGGTGTTGAGGAAAGT+GGG	-	chr7_3:63996694-63996713	Msa1116440:CDS	45.0%
!	ATCTGGTGTTGAGGAAAGTG+GGG	-	chr7_3:63996695-63996714	Msa1116440:CDS	45.0%
	GCTCAACAAGCTAGATCCTT+TGG	-	chr7_3:63996728-63996747	Msa1116440:CDS	45.0%
	GAGAAAGAGAGTGATGACTC+AGG	-	chr7_3:63997026-63997045	Msa1116440:intron	45.0%
	AAAGAGAGTGATGACTCAGG+AGG	-	chr7_3:63997029-63997048	Msa1116440:intron	45.0%
	AGCTTCATTCCATTCTCACC+TGG	+	chr7_3:63997075-63997094	None:intergenic	45.0%
	AGTGCACCTCAAGTGCAAAA+TGG	+	chr7_3:63997314-63997333	None:intergenic	45.0%
	TTTGTCTTTCTGGGTGTGCT+TGG	-	chr7_3:63997464-63997483	Msa1116440:intron	45.0%
!	GTGTGCTTGGTTCTTAGCAA+AGG	-	chr7_3:63997477-63997496	Msa1116440:intron	45.0%
	TCAAGGTGCAGTCGTGTTAA+TGG	-	chr7_3:63997901-63997920	Msa1116440:intron	45.0%
	TGCAGTCGTGTTAATGGAAG+AGG	-	chr7_3:63997907-63997926	Msa1116440:intron	45.0%
	GTCGTGTTAATGGAAGAGGA+TGG	-	chr7_3:63997911-63997930	Msa1116440:intron	45.0%
	GTGTTAATGGAAGAGGATGG+AGG	-	chr7_3:63997914-63997933	Msa1116440:CDS	45.0%
!	TGATGATGAGAAGAAGCCAG+TGG	-	chr7_3:63998140-63998159	Msa1116440:CDS	45.0%
	ATTGGGACAGACAGACAACA+AGG	-	chr7_3:63998221-63998240	Msa1116440:five_prime_UTR	45.0%
	CCCCATCTAGTCTACTACAT+GGG	+	chr7_3:63996262-63996281	None:intergenic	45.0%
	CCCATGTAGTAGACTAGATG+GGG	-	chr7_3:63996259-63996278	Msa1116440:three_prime_UTR	45.0%
	ACCCCATCTAGTCTACTACA+TGG	+	chr7_3:63996263-63996282	None:intergenic	45.0%
!	TCTTCAATCTTGCACCGATG+AGG	-	chr7_3:63996436-63996455	Msa1116440:CDS	45.0%
	TGTCTCTTACGGATCCTCAT+CGG	+	chr7_3:63996453-63996472	None:intergenic	45.0%
!!	TGTTTCAGCTGGTTTGAGCT+TGG	-	chr7_3:63996605-63996624	Msa1116440:CDS	45.0%
!!	AGTGGGAGTGTTTGATCAGA+CGG	+	chr7_3:63996642-63996661	None:intergenic	45.0%
	GATCAAACACTCCCACTGAT+CGG	-	chr7_3:63996645-63996664	Msa1116440:CDS	45.0%
	ATCAAACACTCCCACTGATC+GGG	-	chr7_3:63996646-63996665	Msa1116440:CDS	45.0%
	CAACACCAGATGGATAATCG+TGG	+	chr7_3:63996686-63996705	None:intergenic	45.0%
!	CGATTATCCATCTGGTGTTG+AGG	-	chr7_3:63996686-63996705	Msa1116440:CDS	45.0%
!	CATCTGGTGTTGAGGAAAGT+GGG	-	chr7_3:63996694-63996713	Msa1116440:CDS	45.0%
!	ATCTGGTGTTGAGGAAAGTG+GGG	-	chr7_3:63996695-63996714	Msa1116440:CDS	45.0%
	GCTCAACAAGCTAGATCCTT+TGG	-	chr7_3:63996728-63996747	Msa1116440:CDS	45.0%
	GAGAAAGAGAGTGATGACTC+AGG	-	chr7_3:63997026-63997045	Msa1116440:intron	45.0%
	AAAGAGAGTGATGACTCAGG+AGG	-	chr7_3:63997029-63997048	Msa1116440:intron	45.0%
	AGCTTCATTCCATTCTCACC+TGG	+	chr7_3:63997075-63997094	None:intergenic	45.0%
	AGTGCACCTCAAGTGCAAAA+TGG	+	chr7_3:63997314-63997333	None:intergenic	45.0%
	TTTGTCTTTCTGGGTGTGCT+TGG	-	chr7_3:63997464-63997483	Msa1116440:intron	45.0%
!	GTGTGCTTGGTTCTTAGCAA+AGG	-	chr7_3:63997477-63997496	Msa1116440:intron	45.0%
	TCAAGGTGCAGTCGTGTTAA+TGG	-	chr7_3:63997901-63997920	Msa1116440:intron	45.0%
	TGCAGTCGTGTTAATGGAAG+AGG	-	chr7_3:63997907-63997926	Msa1116440:intron	45.0%
	GTCGTGTTAATGGAAGAGGA+TGG	-	chr7_3:63997911-63997930	Msa1116440:intron	45.0%
	GTGTTAATGGAAGAGGATGG+AGG	-	chr7_3:63997914-63997933	Msa1116440:CDS	45.0%
!	TGATGATGAGAAGAAGCCAG+TGG	-	chr7_3:63998140-63998159	Msa1116440:CDS	45.0%
	ATTGGGACAGACAGACAACA+AGG	-	chr7_3:63998221-63998240	Msa1116440:five_prime_UTR	45.0%
	GGATCTGAGAGATGCAAAGG+TGG	+	chr7_3:63996504-63996523	None:intergenic	50.0%
	TGGGGATCTGAGAGATGCAA+AGG	+	chr7_3:63996507-63996526	None:intergenic	50.0%
	ATGGTGCAACAAGGTGGTGA+TGG	-	chr7_3:63996549-63996568	Msa1116440:CDS	50.0%
	AACGGCCACGATTATCCATC+TGG	-	chr7_3:63996678-63996697	Msa1116440:CDS	50.0%
	CCACTTTCCTCAACACCAGA+TGG	+	chr7_3:63996696-63996715	None:intergenic	50.0%
!	CCATCTGGTGTTGAGGAAAG+TGG	-	chr7_3:63996693-63996712	Msa1116440:CDS	50.0%
!	AGAGGAAGTGCACTGATGGA+AGG	-	chr7_3:63997877-63997896	Msa1116440:intron	50.0%
!	GTGCACTGATGGAAGGTTCA+AGG	-	chr7_3:63997884-63997903	Msa1116440:intron	50.0%
	GGATCTGAGAGATGCAAAGG+TGG	+	chr7_3:63996504-63996523	None:intergenic	50.0%
	TGGGGATCTGAGAGATGCAA+AGG	+	chr7_3:63996507-63996526	None:intergenic	50.0%
	ATGGTGCAACAAGGTGGTGA+TGG	-	chr7_3:63996549-63996568	Msa1116440:CDS	50.0%
	AACGGCCACGATTATCCATC+TGG	-	chr7_3:63996678-63996697	Msa1116440:CDS	50.0%
	CCACTTTCCTCAACACCAGA+TGG	+	chr7_3:63996696-63996715	None:intergenic	50.0%
!	CCATCTGGTGTTGAGGAAAG+TGG	-	chr7_3:63996693-63996712	Msa1116440:CDS	50.0%
!	AGAGGAAGTGCACTGATGGA+AGG	-	chr7_3:63997877-63997896	Msa1116440:intron	50.0%
!	GTGCACTGATGGAAGGTTCA+AGG	-	chr7_3:63997884-63997903	Msa1116440:intron	50.0%
	TGTTGCACCATCACCGGTGA+GGG	+	chr7_3:63996540-63996559	None:intergenic	55.0%
	TTGTTGCACCATCACCGGTG+AGG	+	chr7_3:63996541-63996560	None:intergenic	55.0%
!	TCACCGGTGATGGTGCAACA+AGG	-	chr7_3:63996540-63996559	Msa1116440:CDS	55.0%
	CCACCTTGTTGCACCATCAC+CGG	+	chr7_3:63996546-63996565	None:intergenic	55.0%
	GAGAGTGATGACTCAGGAGG+AGG	-	chr7_3:63997032-63997051	Msa1116440:intron	55.0%
	TGTTGCACCATCACCGGTGA+GGG	+	chr7_3:63996540-63996559	None:intergenic	55.0%
	TTGTTGCACCATCACCGGTG+AGG	+	chr7_3:63996541-63996560	None:intergenic	55.0%
!	TCACCGGTGATGGTGCAACA+AGG	-	chr7_3:63996540-63996559	Msa1116440:CDS	55.0%
	CCACCTTGTTGCACCATCAC+CGG	+	chr7_3:63996546-63996565	None:intergenic	55.0%
	GAGAGTGATGACTCAGGAGG+AGG	-	chr7_3:63997032-63997051	Msa1116440:intron	55.0%
	GGTGAGGGGTTGAACTGGTG+GGG	+	chr7_3:63996525-63996544	None:intergenic	60.0%
	CGGTGAGGGGTTGAACTGGT+GGG	+	chr7_3:63996526-63996545	None:intergenic	60.0%
	CCACCAGTTCAACCCCTCAC+CGG	-	chr7_3:63996524-63996543	Msa1116440:CDS	60.0%
	TCACCGGTGAGGGGTTGAAC+TGG	+	chr7_3:63996530-63996549	None:intergenic	60.0%
	GTTCAACCCCTCACCGGTGA+TGG	-	chr7_3:63996530-63996549	Msa1116440:CDS	60.0%
	GTTGCACCATCACCGGTGAG+GGG	+	chr7_3:63996539-63996558	None:intergenic	60.0%
!	CCGGTGATGGTGCAACAAGG+TGG	-	chr7_3:63996543-63996562	Msa1116440:CDS	60.0%
	GGTGAGGGGTTGAACTGGTG+GGG	+	chr7_3:63996525-63996544	None:intergenic	60.0%
	CGGTGAGGGGTTGAACTGGT+GGG	+	chr7_3:63996526-63996545	None:intergenic	60.0%
	CCACCAGTTCAACCCCTCAC+CGG	-	chr7_3:63996524-63996543	Msa1116440:CDS	60.0%
	TCACCGGTGAGGGGTTGAAC+TGG	+	chr7_3:63996530-63996549	None:intergenic	60.0%
	GTTCAACCCCTCACCGGTGA+TGG	-	chr7_3:63996530-63996549	Msa1116440:CDS	60.0%
	GTTGCACCATCACCGGTGAG+GGG	+	chr7_3:63996539-63996558	None:intergenic	60.0%
!	CCGGTGATGGTGCAACAAGG+TGG	-	chr7_3:63996543-63996562	Msa1116440:CDS	60.0%
	CCGGTGAGGGGTTGAACTGG+TGG	+	chr7_3:63996527-63996546	None:intergenic	65.0%
	CCGGTGAGGGGTTGAACTGG+TGG	+	chr7_3:63996527-63996546	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	63996175	63998488	63996175	ID=Msa1116440;Name=Msa1116440
chr7_3	mRNA	63996175	63998488	63996175	ID=Msa1116440-mRNA-1;Parent=Msa1116440;Name=Msa1116440-mRNA-1;_AED=0.28;_eAED=0.28;_QI=278\|1\|1\|1\|1\|1\|4\|219\|336
chr7_3	exon	63996175	63996977	63996175	ID=Msa1116440-mRNA-1:exon:15148;Parent=Msa1116440-mRNA-1
chr7_3	exon	63997111	63997169	63997111	ID=Msa1116440-mRNA-1:exon:15147;Parent=Msa1116440-mRNA-1
chr7_3	exon	63997588	63997658	63997588	ID=Msa1116440-mRNA-1:exon:15146;Parent=Msa1116440-mRNA-1
chr7_3	exon	63997914	63998488	63997914	ID=Msa1116440-mRNA-1:exon:15145;Parent=Msa1116440-mRNA-1
chr7_3	five_prime_UTR	63998211	63998488	63998211	ID=Msa1116440-mRNA-1:five_prime_utr;Parent=Msa1116440-mRNA-1
chr7_3	CDS	63997914	63998210	63997914	ID=Msa1116440-mRNA-1:cds;Parent=Msa1116440-mRNA-1
chr7_3	CDS	63997588	63997658	63997588	ID=Msa1116440-mRNA-1:cds;Parent=Msa1116440-mRNA-1
chr7_3	CDS	63997111	63997169	63997111	ID=Msa1116440-mRNA-1:cds;Parent=Msa1116440-mRNA-1
chr7_3	CDS	63996394	63996977	63996394	ID=Msa1116440-mRNA-1:cds;Parent=Msa1116440-mRNA-1
chr7_3	three_prime_UTR	63996175	63996393	63996175	ID=Msa1116440-mRNA-1:three_prime_utr;Parent=Msa1116440-mRNA-1

Gene Sequence

>Msa1116440

ATGAGGATCCGTAAGAGACAAGTTCTTTTCTCTTCTTCTGAGTCTATTCCACCTTTGCATCTCTCAGATCCCCACCAGTTCAACCCCTCACCGGTGATGGTGCAACAAGGTGGTGATGGACCAAAACCTTGTTCTTCACAATCACAAGAACATGTTTCAGCTGGTTTGAGCTTGGATCGTTATCAGCCGTCTGATCAAACACTCCCACTGATCGGGAAACTAAACAACGGCCACGATTATCCATCTGGTGTTGAGGAAAGTGGGGTATACAAACAGCTCAACAAGCTAGATCCTTTGGATAAGAAAGTTAGAGGGGAAGAGAAAGAGAGTGATGACTCAGGAGGAGGTAACAAAAGTAATCATTCCAGCAAAGGAGATATCTTGGCTGTTTCTCAAGTCTTGCCATCATCAAGCACTTTTGCTGAAGATGAGATATGGTTGGAGGGAGAGAAAACTATTCCCTTAAAGAAAAGGAAAGGAAGGTTTGAGAGTATTTGTATGGAGAGTAATGATAGTAAGAAAGTGAAGGCTAAGATGAATAAGAAGTGTTCTTTGGGAAAAGATGATGAAGATGAAGAAAGTGAAACAAAAGTGAATATTAAGAAGAAGGTCACAAAAAGAGGAAGTGCACTGATGGAAGGTTCAAGGTGCAGTCGTGTTAATGGAAGAGGATGGAGGTGTTGTCAACAAACACTTGTTGGTTATTCACTTTGTGAGCATCATTTAGGGAAAGGAAGATTGAGAAGTATGACAAGTGTTAGAAATAGGTCTATTGGATTTTCTACTACTACTGAACCAAACAATGTTGTTGATAGTGCTTCATCTTCTAATTCTGATCTTGAAAAGAAAAGCATGTATGATAATGATGATAAGTTGGATAATGATGATGAGAAGAAGCCAGTGGTAATTGCAAAGAAGAGAATGAAGCTTGGAATAGTAAAAGCCCGTTCTATGATCAGCTTATTGGGACAGACAGACAACAAGGTTGTAGTCGATGAGAATAACAAGTAA

Protein sequence

>Msa1116440

MRIRKRQVLFSSSESIPPLHLSDPHQFNPSPVMVQQGGDGPKPCSSQSQEHVSAGLSLDRYQPSDQTLPLIGKLNNGHDYPSGVEESGVYKQLNKLDPLDKKVRGEEKESDDSGGGNKSNHSSKGDILAVSQVLPSSSTFAEDEIWLEGEKTIPLKKRKGRFESICMESNDSKKVKAKMNKKCSLGKDDEDEESETKVNIKKKVTKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSIGFSTTTEPNNVVDSASSSNSDLEKKSMYDNDDKLDNDDEKKPVVIAKKRMKLGIVKARSMISLLGQTDNKVVVDENNK*