Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0983160 | KEH16865.1 | 76.056 | 568 | 33 | 9 | 7 | 475 | 297 | 860 | 0.0 | 810 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0983160 | sp|P93286|CCMFC_ARATH | 79.365 | 189 | 29 | 2 | 130 | 308 | 254 | 442 | 5.88e-96 | 299 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0983160 | A0A072TTM0 | 76.056 | 568 | 33 | 9 | 7 | 475 | 297 | 860 | 0.0 | 810 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0069500 | Msa0983160 | 0.815761 | 7.832904e-52 | -8.615850e-47 |
Msa0983160 | Msa0983170 | 0.810178 | 1.311242e-50 | -8.615850e-47 |
Msa0983160 | Msa0983300 | 0.831010 | 2.126977e-55 | -8.615850e-47 |
Msa0983160 | Msa0983350 | 0.834397 | 3.069566e-56 | -8.615850e-47 |
Msa0983160 | Msa0983550 | 0.977773 | 1.868269e-144 | -8.615850e-47 |
Msa0983160 | Msa1391970 | 0.833347 | 5.620617e-56 | -8.615850e-47 |
Msa0983160 | Msa1392030 | 0.814501 | 1.492061e-51 | -8.615850e-47 |
Msa0983160 | Msa1392160 | 0.801606 | 8.317828e-49 | -8.615850e-47 |
Msa0908820 | Msa0983160 | 0.962460 | 6.643462e-121 | -8.615850e-47 |
Msa0920000 | Msa0983160 | 0.825777 | 3.895104e-54 | -8.615850e-47 |
Msa0920060 | Msa0983160 | 0.831328 | 1.776106e-55 | -8.615850e-47 |
Msa0944950 | Msa0983160 | 0.986049 | 1.659259e-165 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0983160 | MtrunA17_MTg0491381 | 94.340 | 212 | 2 | 2 | 111 | 312 | 1 | 212 | 3.61e-142 | 407 |
Msa0983160 | MtrunA17_Chr6g0457311 | 93.158 | 190 | 3 | 2 | 133 | 312 | 258 | 447 | 9.17e-120 | 358 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0983160 | ATMG00180.1 | 81.865 | 193 | 25 | 2 | 130 | 312 | 254 | 446 | 2.39e-103 | 316 |
Find 159 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGCGAAAATAATAATTTA+TGG | 0.188271 | 6_4:-26309416 | Msa0983160:CDS |
CTGTTAGTGGACAGAGCTTC+TGG | 0.208328 | 6_4:-26308632 | Msa0983160:CDS |
TATGAGGCCGGAAAGTTTAT+TGG | 0.241442 | 6_4:+26309483 | None:intergenic |
AATAAAAGGCAGTTTAATTA+TGG | 0.257005 | 6_4:+26309257 | None:intergenic |
GGTATACCAGCCGCCTGTTC+TGG | 0.261255 | 6_4:+26309281 | None:intergenic |
CCGCCCCGACCGGCAGCTGC+TGG | 0.271520 | 6_4:-26309838 | Msa0983160:CDS |
TCAGCGATTGGCATTGGTTT+TGG | 0.278134 | 6_4:+26308656 | None:intergenic |
TTCTATGCCGACCCCGGCCC+GGG | 0.278863 | 6_4:+26310176 | None:intergenic |
CCTGTTGCCAATAAACTTTC+CGG | 0.284972 | 6_4:-26309490 | Msa0983160:CDS |
GGCTTTGCCAACACAACATT+AGG | 0.291533 | 6_4:+26310140 | None:intergenic |
GAAGCATATCTATCCGTAAA+TGG | 0.301221 | 6_4:+26309321 | None:intergenic |
GAGAGGCATTCTTCAACTTC+TGG | 0.301504 | 6_4:+26308194 | None:intergenic |
GCAATCCATTCTTTCATTCA+TGG | 0.301920 | 6_4:-26308609 | Msa0983160:CDS |
CAGCAGCTGCCGGTCGGGGC+GGG | 0.304794 | 6_4:+26309839 | None:intergenic |
GCCGTGAGCGCGGTGGGAAC+GGG | 0.316107 | 6_4:-26310216 | Msa0983160:CDS |
TCCAACGCAACTTATCCTTT+TGG | 0.321802 | 6_4:+26309169 | None:intergenic |
TGAAATTAACAATAATAAAT+CGG | 0.322581 | 6_4:-26308218 | Msa0983160:CDS |
GGCCGTGAGCGCGGTGGGAA+CGG | 0.322985 | 6_4:-26310217 | Msa0983160:CDS |
TCTCTCAGTGTGGTCAGCAC+TGG | 0.333171 | 6_4:+26310420 | None:intergenic |
AAGCCAACTTCTTGGGTTGC+GGG | 0.342786 | 6_4:-26310122 | Msa0983160:CDS |
TGTTGGCAAAGCCAACTTCT+TGG | 0.342955 | 6_4:-26310130 | Msa0983160:CDS |
ACATGAGGCGATCGTTCGTT+AGG | 0.352912 | 6_4:+26309541 | None:intergenic |
AGACCCAGCAGCTGCCGGTC+GGG | 0.354277 | 6_4:+26309834 | None:intergenic |
CCCACTTCTCATTCCATTTG+TGG | 0.355708 | 6_4:-26309588 | Msa0983160:CDS |
ATTACTGCTGGGGTGGGGCT+CGG | 0.356446 | 6_4:+26309732 | None:intergenic |
GTTCACTCAACGATTGCCTT+TGG | 0.367519 | 6_4:-26309673 | Msa0983160:CDS |
GAGCCAGAGTCCGCCTTAGA+AGG | 0.372563 | 6_4:+26308148 | None:intergenic |
CTCTCAGTGTGGTCAGCACT+GGG | 0.376688 | 6_4:+26310421 | None:intergenic |
CAGCAGTAATGGTGCGGCTT+AGG | 0.383155 | 6_4:-26309719 | Msa0983160:CDS |
GATCATCAAATTCCCACAAA+TGG | 0.389159 | 6_4:+26309575 | None:intergenic |
TTTGGGTTCCGAACTCCATA+TGG | 0.390141 | 6_4:-26309655 | Msa0983160:CDS |
TATACATACAAATCCATTTA+CGG | 0.398392 | 6_4:-26309334 | Msa0983160:CDS |
TTCACTCAACGATTGCCTTT+GGG | 0.400692 | 6_4:-26309672 | Msa0983160:CDS |
CTTAACGCCACTTCGCCAAC+TGG | 0.402672 | 6_4:+26310378 | None:intergenic |
AAAGCCAACTTCTTGGGTTG+CGG | 0.404798 | 6_4:-26310123 | Msa0983160:CDS |
GGATTTATGTTGGCTTCGTC+GGG | 0.406463 | 6_4:-26309219 | Msa0983160:CDS |
TTGCTTGCACGGCTTTCGAC+CGG | 0.410329 | 6_4:-26308869 | Msa0983160:CDS |
AGGATTTATGTTGGCTTCGT+CGG | 0.413029 | 6_4:-26309220 | Msa0983160:CDS |
GACCCAGCAGCTGCCGGTCG+GGG | 0.413579 | 6_4:+26309835 | None:intergenic |
CCACTTCTCATTCCATTTGT+GGG | 0.416058 | 6_4:-26309587 | Msa0983160:CDS |
ATTCTATGCCGACCCCGGCC+CGG | 0.419460 | 6_4:+26310175 | None:intergenic |
CTTTCGACCGGGACGGGAAG+AGG | 0.420223 | 6_4:-26308857 | Msa0983160:CDS |
CGAGGTCTCGATCATTTACA+TGG | 0.420959 | 6_4:-26309612 | Msa0983160:intron |
ACAGCAAAGAAGGCCTTCTA+AGG | 0.428985 | 6_4:-26308161 | Msa0983160:CDS |
AGATATGCTTCGATTGGAAC+TGG | 0.429623 | 6_4:-26309309 | Msa0983160:CDS |
CGTGCAAGCAAAGACGTTAG+AGG | 0.430977 | 6_4:+26308881 | None:intergenic |
GCTTTGCCAACACAACATTA+GGG | 0.431283 | 6_4:+26310141 | None:intergenic |
GTTGGCAAAGCCAACTTCTT+GGG | 0.432759 | 6_4:-26310129 | Msa0983160:CDS |
CCGGAAAGTTTATTGGCAAC+AGG | 0.434595 | 6_4:+26309490 | None:intergenic |
ATACAGCTCGGGCCGAAGAC+CGG | 0.442080 | 6_4:+26309789 | None:intergenic |
CTCATATGAGAATGGAAAAC+TGG | 0.445029 | 6_4:-26309466 | Msa0983160:CDS |
TTCCCACCGCGCTCACGGCC+CGG | 0.445440 | 6_4:+26310220 | None:intergenic |
CGCACCATTACTGCTGGGGT+GGG | 0.445863 | 6_4:+26309726 | None:intergenic |
CTACCGCTGGAAGGCCAGCC+GGG | 0.449228 | 6_4:-26310238 | Msa0983160:intron |
CATTCATGGACGGTCACTTA+GGG | 0.451324 | 6_4:-26308595 | Msa0983160:intron |
GCCAATCGCTGATCTGTTAG+TGG | 0.452923 | 6_4:-26308645 | Msa0983160:CDS |
GAAATTAACAATAATAAATC+GGG | 0.458057 | 6_4:-26308217 | Msa0983160:CDS |
CCGATGAAGGAGAAACTTGC+TGG | 0.458697 | 6_4:-26308088 | Msa0983160:CDS |
CCGCACCATTACTGCTGGGG+TGG | 0.460417 | 6_4:+26309725 | None:intergenic |
ACGGATAGATATGCTTCGAT+TGG | 0.460582 | 6_4:-26309315 | Msa0983160:CDS |
TCATTCATGGACGGTCACTT+AGG | 0.462564 | 6_4:-26308596 | Msa0983160:CDS |
AACAACGCTCCTTCCCCATA+TGG | 0.463316 | 6_4:+26309640 | None:intergenic |
GGGTTCTTCCCTCTTGTCCT+CGG | 0.463897 | 6_4:+26308062 | None:intergenic |
CTCCTTCCCCATATGGAGTT+CGG | 0.467009 | 6_4:+26309647 | None:intergenic |
CTCTAACGTCTTTGCTTGCA+CGG | 0.470171 | 6_4:-26308880 | Msa0983160:CDS |
AACAGATCAGCGATTGGCAT+TGG | 0.472540 | 6_4:+26308650 | None:intergenic |
AACTCGCCCCACGTACGGTT+CGG | 0.472758 | 6_4:-26309758 | Msa0983160:CDS |
CCAGCAGCTGCCGGTCGGGG+CGG | 0.473246 | 6_4:+26309838 | None:intergenic |
CATTTGTAAGAGTCCTCCTC+AGG | 0.476570 | 6_4:-26308122 | Msa0983160:CDS |
GAGACCCAGCAGCTGCCGGT+CGG | 0.477652 | 6_4:+26309833 | None:intergenic |
TGCTTGCACGGCTTTCGACC+GGG | 0.478724 | 6_4:-26308868 | Msa0983160:CDS |
ACTACCGCTGGAAGGCCAGC+CGG | 0.483155 | 6_4:-26310239 | Msa0983160:intron |
AAGCTTATCCCCGCCCCGAC+CGG | 0.485515 | 6_4:-26309848 | Msa0983160:CDS |
TGTTAGTGGACAGAGCTTCT+GGG | 0.489545 | 6_4:-26308631 | Msa0983160:CDS |
TTGGGTTCCGAACTCCATAT+GGG | 0.491526 | 6_4:-26309654 | Msa0983160:CDS |
ACCTTACCTTTATCGCCCGT+CGG | 0.491998 | 6_4:-26308791 | Msa0983160:CDS |
TGCATCTTTCCACACAGCAT+TGG | 0.492653 | 6_4:-26308825 | Msa0983160:CDS |
AGCAGACGTAGGCTTCTAAT+GGG | 0.496092 | 6_4:+26308003 | None:intergenic |
CAGCCGGGCCGTGAGCGCGG+TGG | 0.498669 | 6_4:-26310223 | Msa0983160:CDS |
AAAAGGCAGTTTAATTATGG+TGG | 0.498772 | 6_4:+26309260 | None:intergenic |
TGCACGGCTTTCGACCGGGA+CGG | 0.500492 | 6_4:-26308864 | Msa0983160:CDS |
TCTTCGGCCCGAGCTGTATG+AGG | 0.501176 | 6_4:-26309785 | Msa0983160:CDS |
CCGCCCGCAACCCAAGAAGT+TGG | 0.504276 | 6_4:+26310119 | None:intergenic |
TATTCGGATAGGATTTATGT+TGG | 0.504584 | 6_4:-26309229 | Msa0983160:CDS |
CTAAGCCGCACCATTACTGC+TGG | 0.504746 | 6_4:+26309720 | None:intergenic |
ACACAGATGGACAGCAAAGA+AGG | 0.509516 | 6_4:-26308171 | Msa0983160:CDS |
AGGCCTTCTAAGGCGGACTC+TGG | 0.509544 | 6_4:-26308151 | Msa0983160:CDS |
GAGCCCCACCCCAGCAGTAA+TGG | 0.510043 | 6_4:-26309730 | Msa0983160:CDS |
TGCGAACCTTGACGCCCGAC+GGG | 0.510569 | 6_4:+26308776 | None:intergenic |
AGTTTCTGCCTCATACAGCT+CGG | 0.515951 | 6_4:+26309777 | None:intergenic |
TGGGGAGACCCAGCAGCTGC+CGG | 0.516111 | 6_4:+26309829 | None:intergenic |
GGAACTGGAAGTTCCAGAAC+AGG | 0.517306 | 6_4:-26309294 | Msa0983160:CDS |
CCTTACCTTTATCGCCCGTC+GGG | 0.525411 | 6_4:-26308790 | Msa0983160:CDS |
CCAGCAAGTTTCTCCTTCAT+CGG | 0.526011 | 6_4:+26308088 | None:intergenic |
CATGAGGCGATCGTTCGTTA+GGG | 0.530158 | 6_4:+26309542 | None:intergenic |
ACCGTCCATGAATGAAAGAA+TGG | 0.534673 | 6_4:+26308604 | None:intergenic |
TTTGTTACGTCAGCTCCAAA+AGG | 0.535085 | 6_4:-26309184 | Msa0983160:CDS |
GCACCATTACTGCTGGGGTG+GGG | 0.538302 | 6_4:+26309727 | None:intergenic |
TTTCCGGCCTCATATGAGAA+TGG | 0.538939 | 6_4:-26309474 | Msa0983160:CDS |
CGGGCGATAAAGGTAAGGTA+AGG | 0.541179 | 6_4:+26308795 | None:intergenic |
GGCACGAGATTGTCCGATGA+AGG | 0.542322 | 6_4:-26308101 | Msa0983160:CDS |
CCTTCATTCTATGCCGACCC+CGG | 0.542373 | 6_4:+26310170 | None:intergenic |
TCCATTCTTTCATTCATGGA+CGG | 0.545247 | 6_4:-26308605 | Msa0983160:CDS |
CATCTCTCCTAAACTTCCCC+CGG | 0.547799 | 6_4:-26309808 | Msa0983160:CDS |
GTTTCTGCCTCATACAGCTC+GGG | 0.549518 | 6_4:+26309778 | None:intergenic |
GAGGAAACCTCTTCCCGTCC+CGG | 0.552826 | 6_4:+26308850 | None:intergenic |
AACTGTAACGGATTCACCCT+AGG | 0.553495 | 6_4:+26308040 | None:intergenic |
TTGCTGTCCATCTGTGTGAG+AGG | 0.557091 | 6_4:+26308177 | None:intergenic |
TGGGTGTAAGCCTCGCTGCT+CGG | 0.557420 | 6_4:-26310449 | Msa0983160:CDS |
TGCTGGTTGCCGAGGACAAG+AGG | 0.565924 | 6_4:-26308071 | Msa0983160:CDS |
CGGGGTCGGCATAGAATGAA+GGG | 0.567642 | 6_4:-26310169 | Msa0983160:CDS |
TTTATGTTGGCTTCGTCGGG+AGG | 0.568263 | 6_4:-26309216 | Msa0983160:CDS |
GCAGAAACTCGCCCCACGTA+CGG | 0.568645 | 6_4:-26309763 | Msa0983160:CDS |
TTTCCATTCTCATATGAGGC+CGG | 0.569642 | 6_4:+26309471 | None:intergenic |
GGGTGAATCCGTTACAGTTG+CGG | 0.572733 | 6_4:-26308036 | Msa0983160:CDS |
AGGCGATCGTTCGTTAGGGA+CGG | 0.574187 | 6_4:+26309546 | None:intergenic |
TAAGCCGCACCATTACTGCT+GGG | 0.575414 | 6_4:+26309721 | None:intergenic |
CCCACAAATGGAATGAGAAG+TGG | 0.576883 | 6_4:+26309587 | None:intergenic |
ACTGTAACGGATTCACCCTA+GGG | 0.580403 | 6_4:+26308041 | None:intergenic |
GAGAAACTTGCTGGTTGCCG+AGG | 0.584163 | 6_4:-26308079 | Msa0983160:CDS |
AAGAATGCCTCTCACACAGA+TGG | 0.589254 | 6_4:-26308184 | Msa0983160:CDS |
GGACAATCTCGTGCCTGAGG+AGG | 0.591046 | 6_4:+26308109 | None:intergenic |
AACAACGAGCACGACTGAAG+TGG | 0.592537 | 6_4:-26309358 | Msa0983160:CDS |
TCGCCCCACGTACGGTTCGG+AGG | 0.595092 | 6_4:-26309755 | Msa0983160:CDS |
ATCGGACAATCTCGTGCCTG+AGG | 0.595328 | 6_4:+26308106 | None:intergenic |
TCCACTAACAGATCAGCGAT+TGG | 0.597249 | 6_4:+26308644 | None:intergenic |
TCCAAAAGGATAAGTTGCGT+TGG | 0.598164 | 6_4:-26309170 | Msa0983160:CDS |
CCAACTTCTTGGGTTGCGGG+CGG | 0.601762 | 6_4:-26310119 | Msa0983160:CDS |
TTCCGAACTCCATATGGGGA+AGG | 0.601852 | 6_4:-26309649 | Msa0983160:CDS |
CCACAAATGGAATGAGAAGT+GGG | 0.607621 | 6_4:+26309588 | None:intergenic |
TTGGATGAACTAATGCGAAT+GGG | 0.608426 | 6_4:-26310468 | None:intergenic |
GGGTTGCGGGCGGAGAAGAG+CGG | 0.611745 | 6_4:-26310109 | Msa0983160:CDS |
GGGCGATAAAGGTAAGGTAA+GGG | 0.613080 | 6_4:+26308796 | None:intergenic |
TTTGGATGAACTAATGCGAA+TGG | 0.616157 | 6_4:-26310469 | None:intergenic |
GGTAATGCCAGTTGGCGAAG+TGG | 0.617022 | 6_4:-26310385 | Msa0983160:CDS |
AAAGTTTATTGGCAACAGGT+CGG | 0.617299 | 6_4:+26309494 | None:intergenic |
GGATGGCCCTAATGTTGTGT+TGG | 0.624287 | 6_4:-26310147 | Msa0983160:CDS |
CCACCCCAGCAGTAATGGTG+CGG | 0.624478 | 6_4:-26309725 | Msa0983160:CDS |
AAAGCGCAGGTAATGCCAGT+TGG | 0.627476 | 6_4:-26310393 | Msa0983160:CDS |
CGGCCTCCGAACCGTACGTG+GGG | 0.627484 | 6_4:+26309752 | None:intergenic |
GCAAAGAAGGCCTTCTAAGG+CGG | 0.631599 | 6_4:-26308158 | Msa0983160:CDS |
CGCTTTCGTCTCTCTCAGTG+TGG | 0.633261 | 6_4:+26310410 | None:intergenic |
ATTCATCATGCTCAAACATG+AGG | 0.643382 | 6_4:+26309526 | None:intergenic |
GCTGGTTGCCGAGGACAAGA+GGG | 0.644222 | 6_4:-26308070 | Msa0983160:CDS |
TGGGTTCCGAACTCCATATG+GGG | 0.648864 | 6_4:-26309653 | Msa0983160:CDS |
ACAAGAGGGAAGAACCCCTA+GGG | 0.649278 | 6_4:-26308056 | Msa0983160:CDS |
GACAAGAGGGAAGAACCCCT+AGG | 0.649952 | 6_4:-26308057 | Msa0983160:CDS |
TCGGCATAGAATGAAGGGGA+TGG | 0.655914 | 6_4:-26310164 | Msa0983160:CDS |
AAGCCGCACCATTACTGCTG+GGG | 0.656288 | 6_4:+26309722 | None:intergenic |
ACTGAGAGAGACGAAAGCGC+AGG | 0.664834 | 6_4:-26310406 | Msa0983160:CDS |
ACTGGAAGTTCCAGAACAGG+CGG | 0.667091 | 6_4:-26309291 | Msa0983160:CDS |
CTGGGTGTTTCCGAGCAGCG+AGG | 0.675742 | 6_4:+26310439 | None:intergenic |
GGGGTCGGCATAGAATGAAG+GGG | 0.682209 | 6_4:-26310168 | Msa0983160:CDS |
GGGACAGAACCAATGCTGTG+TGG | 0.684133 | 6_4:+26308816 | None:intergenic |
ATATGGAGTTCGGAACCCAA+AGG | 0.687361 | 6_4:+26309657 | None:intergenic |
GGGGAAGTTTAGGAGAGATG+GGG | 0.694692 | 6_4:+26309811 | None:intergenic |
CTGTAACGGATTCACCCTAG+GGG | 0.770874 | 6_4:+26308042 | None:intergenic |
CTGTGTGGAAAGATGCAACG+AGG | 0.793122 | 6_4:+26308831 | None:intergenic |
GTGGCGTTAAGCATCCCTAG+CGG | 0.814346 | 6_4:-26310366 | Msa0983160:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATTAACAATAATAAAT+CGG | - | chr6_4:26310256-26310275 | Msa0983160:intron | 10.0% |
!!! | TATAGTATATAAATGGATTT+TGG | - | chr6_4:26308584-26308603 | Msa0983160:intron | 15.0% |
!!! | ATAGTATATAAATGGATTTT+GGG | - | chr6_4:26308585-26308604 | Msa0983160:intron | 15.0% |
!! | ATAGCGAAAATAATAATTTA+TGG | - | chr6_4:26309058-26309077 | Msa0983160:intron | 15.0% |
!!! | TGCCTTTTATTTTTTTTATT+CGG | - | chr6_4:26309229-26309248 | Msa0983160:CDS | 15.0% |
!! | ATCCGAATAAAAAAAATAAA+AGG | + | chr6_4:26309234-26309253 | None:intergenic | 15.0% |
!!! | TTTATTTTTTTTATTCGGAT+AGG | - | chr6_4:26309234-26309253 | Msa0983160:CDS | 15.0% |
!! | AATTGCATTAAAAAAATCAA+AGG | - | chr6_4:26309353-26309372 | Msa0983160:CDS | 15.0% |
!! | GAAATTAACAATAATAAATC+GGG | - | chr6_4:26310257-26310276 | Msa0983160:intron | 15.0% |
!!! | TATTTCATCCCATTTTTTTT+CGG | + | chr6_4:26308541-26308560 | None:intergenic | 20.0% |
!!! | TAGTATATAAATGGATTTTG+GGG | - | chr6_4:26308586-26308605 | Msa0983160:intron | 20.0% |
!! | TATACATACAAATCCATTTA+CGG | - | chr6_4:26309140-26309159 | Msa0983160:intron | 20.0% |
!! | AATAAAAGGCAGTTTAATTA+TGG | + | chr6_4:26309220-26309239 | None:intergenic | 20.0% |
!!! | AAATGCACATTTATTTTTAC+GGG | + | chr6_4:26310186-26310205 | None:intergenic | 20.0% |
!!! | CAAATGCACATTTATTTTTA+CGG | + | chr6_4:26310187-26310206 | None:intergenic | 20.0% |
!!! | ATTTCATCCCATTTTTTTTC+GGG | + | chr6_4:26308540-26308559 | None:intergenic | 25.0% |
!!! | AGTATATAAATGGATTTTGG+GGG | - | chr6_4:26308587-26308606 | Msa0983160:intron | 25.0% |
!!! | CTCTAAAGTATCTTTTTTCT+GGG | + | chr6_4:26309095-26309114 | None:intergenic | 25.0% |
!!! | TCTCTAAAGTATCTTTTTTC+TGG | + | chr6_4:26309096-26309115 | None:intergenic | 25.0% |
! | TAATGCAATTAAGAATTCCA+CGG | + | chr6_4:26309343-26309362 | None:intergenic | 25.0% |
! | TAAGATTGCTTAATGAGTTA+TGG | + | chr6_4:26309524-26309543 | None:intergenic | 25.0% |
CTAGCGCTATAGTATATAAA+TGG | - | chr6_4:26308577-26308596 | Msa0983160:intron | 30.0% | |
!! | GTATATAAATGGATTTTGGG+GGG | - | chr6_4:26308588-26308607 | Msa0983160:intron | 30.0% |
!! | TATATAAATGGATTTTGGGG+GGG | - | chr6_4:26308589-26308608 | Msa0983160:intron | 30.0% |
AAAAGGCAGTTTAATTATGG+TGG | + | chr6_4:26309217-26309236 | None:intergenic | 30.0% | |
TATTCGGATAGGATTTATGT+TGG | - | chr6_4:26309245-26309264 | Msa0983160:CDS | 30.0% | |
GCAAAAATACGATAGATAAG+GGG | + | chr6_4:26309730-26309749 | None:intergenic | 30.0% | |
GGCAAAAATACGATAGATAA+GGG | + | chr6_4:26309731-26309750 | None:intergenic | 30.0% | |
CAATAAACTAATGGAAGATG+AGG | + | chr6_4:26310050-26310069 | None:intergenic | 30.0% | |
CGATGTTGACAATAAACTAA+TGG | + | chr6_4:26310059-26310078 | None:intergenic | 30.0% | |
TAGTTGTTAAGTCTTTCCTT+CGG | - | chr6_4:26310103-26310122 | Msa0983160:intron | 30.0% | |
TAAGAGAGCCATTCCATTTA+GGG | - | chr6_4:26308420-26308439 | Msa0983160:intron | 35.0% | |
!!! | ATCCCATTTTTTTTCGGGAT+AGG | + | chr6_4:26308535-26308554 | None:intergenic | 35.0% |
GATCATCAAATTCCCACAAA+TGG | + | chr6_4:26308902-26308921 | None:intergenic | 35.0% | |
ATTCATCATGCTCAAACATG+AGG | + | chr6_4:26308951-26308970 | None:intergenic | 35.0% | |
AAAGTTTATTGGCAACAGGT+CGG | + | chr6_4:26308983-26309002 | None:intergenic | 35.0% | |
! | CAGTTTTCCATTCTCATATG+AGG | + | chr6_4:26309010-26309029 | None:intergenic | 35.0% |
CTCATATGAGAATGGAAAAC+TGG | - | chr6_4:26309008-26309027 | Msa0983160:intron | 35.0% | |
! | AACTGGAGAATTTTCTGCAT+CGG | - | chr6_4:26309025-26309044 | Msa0983160:intron | 35.0% |
!!! | GTATCTTTTTTCTGGGAACA+TGG | + | chr6_4:26309088-26309107 | None:intergenic | 35.0% |
GAAGCATATCTATCCGTAAA+TGG | + | chr6_4:26309156-26309175 | None:intergenic | 35.0% | |
TCAATCAATAGAGGCTAGAT+CGG | - | chr6_4:26309390-26309409 | Msa0983160:intron | 35.0% | |
CTCATGTCAGTATTATCACA+GGG | + | chr6_4:26309475-26309494 | None:intergenic | 35.0% | |
ACTCATGTCAGTATTATCAC+AGG | + | chr6_4:26309476-26309495 | None:intergenic | 35.0% | |
TGATAATACTGACATGAGTC+AGG | - | chr6_4:26309477-26309496 | Msa0983160:CDS | 35.0% | |
GGGCAAAAATACGATAGATA+AGG | + | chr6_4:26309732-26309751 | None:intergenic | 35.0% | |
GCAATCCATTCTTTCATTCA+TGG | - | chr6_4:26309865-26309884 | Msa0983160:intron | 35.0% | |
TCCATTCTTTCATTCATGGA+CGG | - | chr6_4:26309869-26309888 | Msa0983160:intron | 35.0% | |
GTTTATTGTCAACATCGTAG+AGG | - | chr6_4:26310062-26310081 | Msa0983160:intron | 35.0% | |
AGTTGTTAAGTCTTTCCTTC+GGG | - | chr6_4:26310104-26310123 | Msa0983160:intron | 35.0% | |
TGTTGTGCACTAAGAACTTT+AGG | + | chr6_4:26310229-26310248 | None:intergenic | 35.0% | |
GCTTTGCCAACACAACATTA+GGG | + | chr6_4:26308336-26308355 | None:intergenic | 40.0% | |
CTAAGAGAGCCATTCCATTT+AGG | - | chr6_4:26308419-26308438 | Msa0983160:intron | 40.0% | |
!!! | CCATTTTTTTTCGGGATAGG+CGG | + | chr6_4:26308532-26308551 | None:intergenic | 40.0% |
CGCCTATCCCGAAAAAAAAT+GGG | - | chr6_4:26308530-26308549 | Msa0983160:intron | 40.0% | |
TTCACTCAACGATTGCCTTT+GGG | - | chr6_4:26308802-26308821 | Msa0983160:CDS | 40.0% | |
CATGTAAATGATCGAGACCT+CGG | + | chr6_4:26308864-26308883 | None:intergenic | 40.0% | |
CCACAAATGGAATGAGAAGT+GGG | + | chr6_4:26308889-26308908 | None:intergenic | 40.0% | |
CCACTTCTCATTCCATTTGT+GGG | - | chr6_4:26308887-26308906 | Msa0983160:CDS | 40.0% | |
CCTGTTGCCAATAAACTTTC+CGG | - | chr6_4:26308984-26309003 | Msa0983160:intron | 40.0% | |
TATGAGGCCGGAAAGTTTAT+TGG | + | chr6_4:26308994-26309013 | None:intergenic | 40.0% | |
TTTCCATTCTCATATGAGGC+CGG | + | chr6_4:26309006-26309025 | None:intergenic | 40.0% | |
ACGGATAGATATGCTTCGAT+TGG | - | chr6_4:26309159-26309178 | Msa0983160:CDS | 40.0% | |
AGATATGCTTCGATTGGAAC+TGG | - | chr6_4:26309165-26309184 | Msa0983160:CDS | 40.0% | |
!! | AGGATTTATGTTGGCTTCGT+CGG | - | chr6_4:26309254-26309273 | Msa0983160:CDS | 40.0% |
TTTGTTACGTCAGCTCCAAA+AGG | - | chr6_4:26309290-26309309 | Msa0983160:CDS | 40.0% | |
TCCAAAAGGATAAGTTGCGT+TGG | - | chr6_4:26309304-26309323 | Msa0983160:CDS | 40.0% | |
! | TCCAACGCAACTTATCCTTT+TGG | + | chr6_4:26309308-26309327 | None:intergenic | 40.0% |
TCAACCCTCTCAATCAATAG+AGG | - | chr6_4:26309381-26309400 | Msa0983160:intron | 40.0% | |
! | CTAGCCTCTATTGATTGAGA+GGG | + | chr6_4:26309388-26309407 | None:intergenic | 40.0% |
! | TCTAGCCTCTATTGATTGAG+AGG | + | chr6_4:26309389-26309408 | None:intergenic | 40.0% |
GGATAAATCCGAATGACTAG+TGG | - | chr6_4:26309498-26309517 | Msa0983160:CDS | 40.0% | |
AGTTATGGCCACTAGTCATT+CGG | + | chr6_4:26309509-26309528 | None:intergenic | 40.0% | |
ACCGTCCATGAATGAAAGAA+TGG | + | chr6_4:26309873-26309892 | None:intergenic | 40.0% | |
! | CCTCTTTGGAGATGAAAAGA+AGG | + | chr6_4:26309910-26309929 | None:intergenic | 40.0% |
! | CCTTCTTTTCATCTCCAAAG+AGG | - | chr6_4:26309907-26309926 | Msa0983160:intron | 40.0% |
TATTGTCAACATCGTAGAGG+TGG | - | chr6_4:26310065-26310084 | Msa0983160:intron | 40.0% | |
AGATCAGACAAATAACCCGA+AGG | + | chr6_4:26310122-26310141 | None:intergenic | 40.0% | |
AAGTTCTTAGTGCACAACAG+AGG | - | chr6_4:26310230-26310249 | Msa0983160:intron | 40.0% | |
AGTTCTTAGTGCACAACAGA+GGG | - | chr6_4:26310231-26310250 | Msa0983160:intron | 40.0% | |
! | TCAAAGACTTGGTTGGATGC+GGG | + | chr6_4:26308194-26308213 | None:intergenic | 45.0% |
! | GTCAAAGACTTGGTTGGATG+CGG | + | chr6_4:26308195-26308214 | None:intergenic | 45.0% |
ATCCAACCAAGTCTTTGACC+AGG | - | chr6_4:26308196-26308215 | Msa0983160:CDS | 45.0% | |
TCCAACCAAGTCTTTGACCA+GGG | - | chr6_4:26308197-26308216 | Msa0983160:CDS | 45.0% | |
GGCTTTGCCAACACAACATT+AGG | + | chr6_4:26308337-26308356 | None:intergenic | 45.0% | |
TGTTGGCAAAGCCAACTTCT+TGG | - | chr6_4:26308344-26308363 | Msa0983160:intron | 45.0% | |
GTTGGCAAAGCCAACTTCTT+GGG | - | chr6_4:26308345-26308364 | Msa0983160:intron | 45.0% | |
! | AAAGCCAACTTCTTGGGTTG+CGG | - | chr6_4:26308351-26308370 | Msa0983160:intron | 45.0% |
! | CATTTAGGGCGAGACAGAAT+GGG | - | chr6_4:26308434-26308453 | Msa0983160:intron | 45.0% |
CCGCCTATCCCGAAAAAAAA+TGG | - | chr6_4:26308529-26308548 | Msa0983160:intron | 45.0% | |
AGTTTCTGCCTCATACAGCT+CGG | + | chr6_4:26308700-26308719 | None:intergenic | 45.0% | |
GTTCACTCAACGATTGCCTT+TGG | - | chr6_4:26308801-26308820 | Msa0983160:CDS | 45.0% | |
ATATGGAGTTCGGAACCCAA+AGG | + | chr6_4:26308820-26308839 | None:intergenic | 45.0% | |
! | TTTGGGTTCCGAACTCCATA+TGG | - | chr6_4:26308819-26308838 | Msa0983160:CDS | 45.0% |
TTGGGTTCCGAACTCCATAT+GGG | - | chr6_4:26308820-26308839 | Msa0983160:CDS | 45.0% | |
CGAGGTCTCGATCATTTACA+TGG | - | chr6_4:26308862-26308881 | Msa0983160:CDS | 45.0% | |
CCCACTTCTCATTCCATTTG+TGG | - | chr6_4:26308886-26308905 | Msa0983160:CDS | 45.0% | |
CCCACAAATGGAATGAGAAG+TGG | + | chr6_4:26308890-26308909 | None:intergenic | 45.0% | |
CCGGAAAGTTTATTGGCAAC+AGG | + | chr6_4:26308987-26309006 | None:intergenic | 45.0% | |
TTTCCGGCCTCATATGAGAA+TGG | - | chr6_4:26309000-26309019 | Msa0983160:intron | 45.0% | |
! | TGGAGAATTTTCTGCATCGG+TGG | - | chr6_4:26309028-26309047 | Msa0983160:intron | 45.0% |
!! | GGATTTATGTTGGCTTCGTC+GGG | - | chr6_4:26309255-26309274 | Msa0983160:CDS | 45.0% |
TTGGAATCGAGAAAGTTCCG+TGG | - | chr6_4:26309323-26309342 | Msa0983160:CDS | 45.0% | |
ATAGAGGCTAGATCGGACTA+AGG | - | chr6_4:26309397-26309416 | Msa0983160:intron | 45.0% | |
GAGGAAAGGCTAAGCGAAAA+AGG | + | chr6_4:26309548-26309567 | None:intergenic | 45.0% | |
CGTAACGGTAGAAAGAGGAA+AGG | + | chr6_4:26309562-26309581 | None:intergenic | 45.0% | |
CATCTCGTAACGGTAGAAAG+AGG | + | chr6_4:26309567-26309586 | None:intergenic | 45.0% | |
GAGGATACTGCATCTCGTAA+CGG | + | chr6_4:26309577-26309596 | None:intergenic | 45.0% | |
CTCTAACGTCTTTGCTTGCA+CGG | - | chr6_4:26309594-26309613 | Msa0983160:CDS | 45.0% | |
TGCATCTTTCCACACAGCAT+TGG | - | chr6_4:26309649-26309668 | Msa0983160:CDS | 45.0% | |
GGGCGATAAAGGTAAGGTAA+GGG | + | chr6_4:26309681-26309700 | None:intergenic | 45.0% | |
!! | TTGCTCTGGGCTTTTTGTTG+GGG | + | chr6_4:26309752-26309771 | None:intergenic | 45.0% |
!! | CTTGCTCTGGGCTTTTTGTT+GGG | + | chr6_4:26309753-26309772 | None:intergenic | 45.0% |
CAACAAAAAGCCCAGAGCAA+GGG | - | chr6_4:26309752-26309771 | Msa0983160:CDS | 45.0% | |
AACAAAAAGCCCAGAGCAAG+GGG | - | chr6_4:26309753-26309772 | Msa0983160:CDS | 45.0% | |
!!! | GATTGGCATTGGTTTTGGTG+GGG | + | chr6_4:26309816-26309835 | None:intergenic | 45.0% |
!!! | CGATTGGCATTGGTTTTGGT+GGG | + | chr6_4:26309817-26309836 | None:intergenic | 45.0% |
!!! | TCAGCGATTGGCATTGGTTT+TGG | + | chr6_4:26309821-26309840 | None:intergenic | 45.0% |
AACAGATCAGCGATTGGCAT+TGG | + | chr6_4:26309827-26309846 | None:intergenic | 45.0% | |
TCCACTAACAGATCAGCGAT+TGG | + | chr6_4:26309833-26309852 | None:intergenic | 45.0% | |
! | TGTTAGTGGACAGAGCTTCT+GGG | - | chr6_4:26309843-26309862 | Msa0983160:CDS | 45.0% |
TCATTCATGGACGGTCACTT+AGG | - | chr6_4:26309878-26309897 | Msa0983160:intron | 45.0% | |
CATTCATGGACGGTCACTTA+GGG | - | chr6_4:26309879-26309898 | Msa0983160:intron | 45.0% | |
TTTCATCTCCAAAGAGGACG+AGG | - | chr6_4:26309913-26309932 | Msa0983160:intron | 45.0% | |
!! | TGTTTTTGCCTCGTCCTCTT+TGG | + | chr6_4:26309924-26309943 | None:intergenic | 45.0% |
AAAAACAGCGTTCCGTTGTC+CGG | - | chr6_4:26309937-26309956 | Msa0983160:intron | 45.0% | |
ATAGCGTTCTTCAGACCGAA+GGG | + | chr6_4:26310003-26310022 | None:intergenic | 45.0% | |
TATAGCGTTCTTCAGACCGA+AGG | + | chr6_4:26310004-26310023 | None:intergenic | 45.0% | |
TGTGCATTTGACGTAACAGC+AGG | - | chr6_4:26310197-26310216 | Msa0983160:CDS | 45.0% | |
GTTCTTAGTGCACAACAGAG+GGG | - | chr6_4:26310232-26310251 | Msa0983160:intron | 45.0% | |
!! | GAGAGGCATTCTTCAACTTC+TGG | + | chr6_4:26310283-26310302 | None:intergenic | 45.0% |
AAGAATGCCTCTCACACAGA+TGG | - | chr6_4:26310290-26310309 | Msa0983160:intron | 45.0% | |
ACACAGATGGACAGCAAAGA+AGG | - | chr6_4:26310303-26310322 | Msa0983160:intron | 45.0% | |
ACAGCAAAGAAGGCCTTCTA+AGG | - | chr6_4:26310313-26310332 | Msa0983160:intron | 45.0% | |
CATTTGTAAGAGTCCTCCTC+AGG | - | chr6_4:26310352-26310371 | Msa0983160:intron | 45.0% | |
CCAGCAAGTTTCTCCTTCAT+CGG | + | chr6_4:26310389-26310408 | None:intergenic | 45.0% | |
!! | ACTGTAACGGATTCACCCTA+GGG | + | chr6_4:26310436-26310455 | None:intergenic | 45.0% |
!! | AACTGTAACGGATTCACCCT+AGG | + | chr6_4:26310437-26310456 | None:intergenic | 45.0% |
ATCGCATTCCGCAACTGTAA+CGG | + | chr6_4:26310449-26310468 | None:intergenic | 45.0% | |
AAAGCGCAGGTAATGCCAGT+TGG | - | chr6_4:26308081-26308100 | Msa0983160:CDS | 50.0% | |
! | CCTCTCTTTTCGTACCGCTA+GGG | + | chr6_4:26308125-26308144 | None:intergenic | 50.0% |
! | ACCTCTCTTTTCGTACCGCT+AGG | + | chr6_4:26308126-26308145 | None:intergenic | 50.0% |
! | TCCCTGGTCAAAGACTTGGT+TGG | + | chr6_4:26308201-26308220 | None:intergenic | 50.0% |
CCAAGTCTTTGACCAGGGAA+CGG | - | chr6_4:26308202-26308221 | Msa0983160:CDS | 50.0% | |
CAAGTCTTTGACCAGGGAAC+GGG | - | chr6_4:26308203-26308222 | Msa0983160:CDS | 50.0% | |
TAATTCCCACTACCGCTGGA+AGG | - | chr6_4:26308227-26308246 | Msa0983160:CDS | 50.0% | |
TCGGCATAGAATGAAGGGGA+TGG | - | chr6_4:26308310-26308329 | Msa0983160:intron | 50.0% | |
GGATGGCCCTAATGTTGTGT+TGG | - | chr6_4:26308327-26308346 | Msa0983160:intron | 50.0% | |
! | AAGCCAACTTCTTGGGTTGC+GGG | - | chr6_4:26308352-26308371 | Msa0983160:intron | 50.0% |
CTGTCTCGCCCTAAATGGAA+TGG | + | chr6_4:26308431-26308450 | None:intergenic | 50.0% | |
CCATTCTGTCTCGCCCTAAA+TGG | + | chr6_4:26308436-26308455 | None:intergenic | 50.0% | |
! | CCATTTAGGGCGAGACAGAA+TGG | - | chr6_4:26308433-26308452 | Msa0983160:intron | 50.0% |
GTAGTCGTCGTCTGACCAAT+TGG | + | chr6_4:26308486-26308505 | None:intergenic | 50.0% | |
GGGGAAGTTTAGGAGAGATG+GGG | + | chr6_4:26308666-26308685 | None:intergenic | 50.0% | |
GGGGGAAGTTTAGGAGAGAT+GGG | + | chr6_4:26308667-26308686 | None:intergenic | 50.0% | |
CATCTCTCCTAAACTTCCCC+CGG | - | chr6_4:26308666-26308685 | Msa0983160:CDS | 50.0% | |
GTTTCTGCCTCATACAGCTC+GGG | + | chr6_4:26308699-26308718 | None:intergenic | 50.0% | |
TAAGCCGCACCATTACTGCT+GGG | + | chr6_4:26308756-26308775 | None:intergenic | 50.0% | |
TGGGTTCCGAACTCCATATG+GGG | - | chr6_4:26308821-26308840 | Msa0983160:CDS | 50.0% | |
TTCCGAACTCCATATGGGGA+AGG | - | chr6_4:26308825-26308844 | Msa0983160:CDS | 50.0% | |
CTCCTTCCCCATATGGAGTT+CGG | + | chr6_4:26308830-26308849 | None:intergenic | 50.0% | |
AACAACGCTCCTTCCCCATA+TGG | + | chr6_4:26308837-26308856 | None:intergenic | 50.0% | |
!! | AAGGAGCGTTGTTGTTTCCG+AGG | - | chr6_4:26308844-26308863 | Msa0983160:CDS | 50.0% |
CATGAGGCGATCGTTCGTTA+GGG | + | chr6_4:26308935-26308954 | None:intergenic | 50.0% | |
ACATGAGGCGATCGTTCGTT+AGG | + | chr6_4:26308936-26308955 | None:intergenic | 50.0% | |
AACAACGAGCACGACTGAAG+TGG | - | chr6_4:26309116-26309135 | Msa0983160:intron | 50.0% | |
GGAACTGGAAGTTCCAGAAC+AGG | - | chr6_4:26309180-26309199 | Msa0983160:CDS | 50.0% | |
ACTGGAAGTTCCAGAACAGG+CGG | - | chr6_4:26309183-26309202 | Msa0983160:CDS | 50.0% | |
!! | TTTATGTTGGCTTCGTCGGG+AGG | - | chr6_4:26309258-26309277 | Msa0983160:CDS | 50.0% |
GATCGGACTAAGGAGAGAGA+CGG | - | chr6_4:26309407-26309426 | Msa0983160:intron | 50.0% | |
AGGAGAGAGACGGTTGAGTA+CGG | - | chr6_4:26309417-26309436 | Msa0983160:CDS | 50.0% | |
GTTGAGTACGGAAGCGAAAG+CGG | - | chr6_4:26309429-26309448 | Msa0983160:CDS | 50.0% | |
GGAAGCGAAAGCGGAGATAT+AGG | - | chr6_4:26309438-26309457 | Msa0983160:CDS | 50.0% | |
CGTGCAAGCAAAGACGTTAG+AGG | + | chr6_4:26309596-26309615 | None:intergenic | 50.0% | |
CTGTGTGGAAAGATGCAACG+AGG | + | chr6_4:26309646-26309665 | None:intergenic | 50.0% | |
CGGGCGATAAAGGTAAGGTA+AGG | + | chr6_4:26309682-26309701 | None:intergenic | 50.0% | |
ACCTTACCTTTATCGCCCGT+CGG | - | chr6_4:26309683-26309702 | Msa0983160:CDS | 50.0% | |
!! | CCTTGCTCTGGGCTTTTTGT+TGG | + | chr6_4:26309754-26309773 | None:intergenic | 50.0% |
CCAACAAAAAGCCCAGAGCA+AGG | - | chr6_4:26309751-26309770 | Msa0983160:CDS | 50.0% | |
ACAAAAAGCCCAGAGCAAGG+GGG | - | chr6_4:26309754-26309773 | Msa0983160:CDS | 50.0% | |
GGGGGGAAAGAATGCAATTC+CGG | - | chr6_4:26309782-26309801 | Msa0983160:CDS | 50.0% | |
! | TTTTGGTGGGGCTGAGATTC+CGG | + | chr6_4:26309804-26309823 | None:intergenic | 50.0% |
!!! | GCGATTGGCATTGGTTTTGG+TGG | + | chr6_4:26309818-26309837 | None:intergenic | 50.0% |
GCCAATCGCTGATCTGTTAG+TGG | - | chr6_4:26309829-26309848 | Msa0983160:CDS | 50.0% | |
! | CTGTTAGTGGACAGAGCTTC+TGG | - | chr6_4:26309842-26309861 | Msa0983160:CDS | 50.0% |
AAAACAGCGTTCCGTTGTCC+GGG | - | chr6_4:26309938-26309957 | Msa0983160:intron | 50.0% | |
AGATGAGGTTCATTGCTCGC+TGG | + | chr6_4:26310035-26310054 | None:intergenic | 50.0% | |
AGTGTTTGAGCGCGAGAACA+CGG | - | chr6_4:26310148-26310167 | Msa0983160:CDS | 50.0% | |
TTGCTGTCCATCTGTGTGAG+AGG | + | chr6_4:26310300-26310319 | None:intergenic | 50.0% | |
! | GCAAAGAAGGCCTTCTAAGG+CGG | - | chr6_4:26310316-26310335 | Msa0983160:intron | 50.0% |
CCGATGAAGGAGAAACTTGC+TGG | - | chr6_4:26310386-26310405 | Msa0983160:CDS | 50.0% | |
ACAAGAGGGAAGAACCCCTA+GGG | - | chr6_4:26310418-26310437 | Msa0983160:CDS | 50.0% | |
!! | CTGTAACGGATTCACCCTAG+GGG | + | chr6_4:26310435-26310454 | None:intergenic | 50.0% |
GGGTGAATCCGTTACAGTTG+CGG | - | chr6_4:26310438-26310457 | Msa0983160:CDS | 50.0% | |
CTCTCAGTGTGGTCAGCACT+GGG | + | chr6_4:26308056-26308075 | None:intergenic | 55.0% | |
TCTCTCAGTGTGGTCAGCAC+TGG | + | chr6_4:26308057-26308076 | None:intergenic | 55.0% | |
CGCTTTCGTCTCTCTCAGTG+TGG | + | chr6_4:26308067-26308086 | None:intergenic | 55.0% | |
! | ACTGAGAGAGACGAAAGCGC+AGG | - | chr6_4:26308068-26308087 | Msa0983160:CDS | 55.0% |
GGTAATGCCAGTTGGCGAAG+TGG | - | chr6_4:26308089-26308108 | Msa0983160:CDS | 55.0% | |
CTTAACGCCACTTCGCCAAC+TGG | + | chr6_4:26308099-26308118 | None:intergenic | 55.0% | |
GTGGCGTTAAGCATCCCTAG+CGG | - | chr6_4:26308108-26308127 | Msa0983160:CDS | 55.0% | |
CCCTAGCGGTACGAAAAGAG+AGG | - | chr6_4:26308122-26308141 | Msa0983160:CDS | 55.0% | |
CCGTTCCCTGGTCAAAGACT+TGG | + | chr6_4:26308205-26308224 | None:intergenic | 55.0% | |
GTGGGAATTATCCCGTTCCC+TGG | + | chr6_4:26308217-26308236 | None:intergenic | 55.0% | |
GGGATAATTCCCACTACCGC+TGG | - | chr6_4:26308223-26308242 | Msa0983160:CDS | 55.0% | |
CCTTCATTCTATGCCGACCC+CGG | + | chr6_4:26308307-26308326 | None:intergenic | 55.0% | |
CGGGGTCGGCATAGAATGAA+GGG | - | chr6_4:26308305-26308324 | Msa0983160:intron | 55.0% | |
GGGGTCGGCATAGAATGAAG+GGG | - | chr6_4:26308306-26308325 | Msa0983160:intron | 55.0% | |
TTAGGGCGAGACAGAATGGG+CGG | - | chr6_4:26308437-26308456 | Msa0983160:intron | 55.0% | |
CGTCGTCTGACCAATTGGCT+CGG | + | chr6_4:26308481-26308500 | None:intergenic | 55.0% | |
CGGGGGAAGTTTAGGAGAGA+TGG | + | chr6_4:26308668-26308687 | None:intergenic | 55.0% | |
CCTAAACTTCCCCCGGTCTT+CGG | - | chr6_4:26308673-26308692 | Msa0983160:CDS | 55.0% | |
AAGCCGCACCATTACTGCTG+GGG | + | chr6_4:26308755-26308774 | None:intergenic | 55.0% | |
CTAAGCCGCACCATTACTGC+TGG | + | chr6_4:26308757-26308776 | None:intergenic | 55.0% | |
CAGCAGTAATGGTGCGGCTT+AGG | - | chr6_4:26308755-26308774 | Msa0983160:intron | 55.0% | |
AGGCGATCGTTCGTTAGGGA+CGG | + | chr6_4:26308931-26308950 | None:intergenic | 55.0% | |
TTGCTTGCACGGCTTTCGAC+CGG | - | chr6_4:26309605-26309624 | Msa0983160:CDS | 55.0% | |
GGGACAGAACCAATGCTGTG+TGG | + | chr6_4:26309661-26309680 | None:intergenic | 55.0% | |
CCTTACCTTTATCGCCCGTC+GGG | - | chr6_4:26309684-26309703 | Msa0983160:CDS | 55.0% | |
CAAAAAGCCCAGAGCAAGGG+GGG | - | chr6_4:26309755-26309774 | Msa0983160:CDS | 55.0% | |
GAGGTTCATTGCTCGCTGGT+AGG | + | chr6_4:26310031-26310050 | None:intergenic | 55.0% | |
ATCGGACAATCTCGTGCCTG+AGG | + | chr6_4:26310371-26310390 | None:intergenic | 55.0% | |
GGCACGAGATTGTCCGATGA+AGG | - | chr6_4:26310373-26310392 | Msa0983160:CDS | 55.0% | |
!! | GAGAAACTTGCTGGTTGCCG+AGG | - | chr6_4:26310395-26310414 | Msa0983160:CDS | 55.0% |
GGGTTCTTCCCTCTTGTCCT+CGG | + | chr6_4:26310415-26310434 | None:intergenic | 55.0% | |
GACAAGAGGGAAGAACCCCT+AGG | - | chr6_4:26310417-26310436 | Msa0983160:CDS | 55.0% | |
TGGGTGTAAGCCTCGCTGCT+CGG | - | chr6_4:26308025-26308044 | Msa0983160:CDS | 60.0% | |
GCTTCCCAAAAAGCCAGCCC+CGG | - | chr6_4:26308280-26308299 | Msa0983160:intron | 60.0% | |
CTTCCCAAAAAGCCAGCCCC+GGG | - | chr6_4:26308281-26308300 | Msa0983160:intron | 60.0% | |
CCGGGGTCGGCATAGAATGA+AGG | - | chr6_4:26308304-26308323 | Msa0983160:intron | 60.0% | |
! | CCAACTTCTTGGGTTGCGGG+CGG | - | chr6_4:26308355-26308374 | Msa0983160:intron | 60.0% |
CTCTTAGTTACGCTGCGCCC+CGG | + | chr6_4:26308406-26308425 | None:intergenic | 60.0% | |
TAGGGCGAGACAGAATGGGC+GGG | - | chr6_4:26308438-26308457 | Msa0983160:intron | 60.0% | |
GGTCTGGTGTCCGAGCCAAT+TGG | - | chr6_4:26308468-26308487 | Msa0983160:intron | 60.0% | |
CCGAAGACCGGGGGAAGTTT+AGG | + | chr6_4:26308676-26308695 | None:intergenic | 60.0% | |
ATACAGCTCGGGCCGAAGAC+CGG | + | chr6_4:26308688-26308707 | None:intergenic | 60.0% | |
TCTTCGGCCCGAGCTGTATG+AGG | - | chr6_4:26308689-26308708 | Msa0983160:CDS | 60.0% | |
GCAGAAACTCGCCCCACGTA+CGG | - | chr6_4:26308711-26308730 | Msa0983160:CDS | 60.0% | |
AACTCGCCCCACGTACGGTT+CGG | - | chr6_4:26308716-26308735 | Msa0983160:intron | 60.0% | |
ATTACTGCTGGGGTGGGGCT+CGG | + | chr6_4:26308745-26308764 | None:intergenic | 60.0% | |
GCACCATTACTGCTGGGGTG+GGG | + | chr6_4:26308750-26308769 | None:intergenic | 60.0% | |
CGCACCATTACTGCTGGGGT+GGG | + | chr6_4:26308751-26308770 | None:intergenic | 60.0% | |
CCACCCCAGCAGTAATGGTG+CGG | - | chr6_4:26308749-26308768 | Msa0983160:intron | 60.0% | |
GAAGTTCCAGAACAGGCGGC+TGG | - | chr6_4:26309187-26309206 | Msa0983160:CDS | 60.0% | |
GGTATACCAGCCGCCTGTTC+TGG | + | chr6_4:26309196-26309215 | None:intergenic | 60.0% | |
TGCTTGCACGGCTTTCGACC+GGG | - | chr6_4:26309606-26309625 | Msa0983160:CDS | 60.0% | |
GAGGAAACCTCTTCCCGTCC+CGG | + | chr6_4:26309627-26309646 | None:intergenic | 60.0% | |
CCCGACGGGCGATAAAGGTA+AGG | + | chr6_4:26309687-26309706 | None:intergenic | 60.0% | |
ATGCGAACCTTGACGCCCGA+CGG | + | chr6_4:26309702-26309721 | None:intergenic | 60.0% | |
! | TTCCGTTGTCCGGGTGCTGT+TGG | - | chr6_4:26309947-26309966 | Msa0983160:intron | 60.0% |
GTCCAACAGCACCCGGACAA+CGG | + | chr6_4:26309952-26309971 | None:intergenic | 60.0% | |
!! | GTTGTCCGGGTGCTGTTGGA+CGG | - | chr6_4:26309951-26309970 | Msa0983160:intron | 60.0% |
!! | GGACGGACGGACTATTCTGC+TGG | - | chr6_4:26309968-26309987 | Msa0983160:intron | 60.0% |
!! | GGACGGACTATTCTGCTGGC+AGG | - | chr6_4:26309972-26309991 | Msa0983160:intron | 60.0% |
TGCTGGCAGGTGATGCCCTT+CGG | - | chr6_4:26309985-26310004 | Msa0983160:intron | 60.0% | |
!! | AGGCCTTCTAAGGCGGACTC+TGG | - | chr6_4:26310323-26310342 | Msa0983160:intron | 60.0% |
GAGCCAGAGTCCGCCTTAGA+AGG | + | chr6_4:26310329-26310348 | None:intergenic | 60.0% | |
GGACAATCTCGTGCCTGAGG+AGG | + | chr6_4:26310368-26310387 | None:intergenic | 60.0% | |
! | TGCTGGTTGCCGAGGACAAG+AGG | - | chr6_4:26310403-26310422 | Msa0983160:CDS | 60.0% |
GCTGGTTGCCGAGGACAAGA+GGG | - | chr6_4:26310404-26310423 | Msa0983160:CDS | 60.0% | |
CTGGGTGTTTCCGAGCAGCG+AGG | + | chr6_4:26308038-26308057 | None:intergenic | 65.0% | |
TACGTCCGTACCGCTCCTCG+CGG | - | chr6_4:26308161-26308180 | Msa0983160:CDS | 65.0% | |
CTACTCCGCGAGGAGCGGTA+CGG | + | chr6_4:26308169-26308188 | None:intergenic | 65.0% | |
GGGATCTACTCCGCGAGGAG+CGG | + | chr6_4:26308174-26308193 | None:intergenic | 65.0% | |
GATGCGGGATCTACTCCGCG+AGG | + | chr6_4:26308179-26308198 | None:intergenic | 65.0% | |
!! | GCTGGCCTTCCAGCGGTAGT+GGG | + | chr6_4:26308235-26308254 | None:intergenic | 65.0% |
ACTACCGCTGGAAGGCCAGC+CGG | - | chr6_4:26308235-26308254 | Msa0983160:intron | 65.0% | |
ATTCTATGCCGACCCCGGCC+CGG | + | chr6_4:26308302-26308321 | None:intergenic | 65.0% | |
CCGCCCGCAACCCAAGAAGT+TGG | + | chr6_4:26308358-26308377 | None:intergenic | 65.0% | |
ACAGAATGGGCGGGCACGAG+CGG | - | chr6_4:26308447-26308466 | Msa0983160:intron | 65.0% | |
AAGCTTATCCCCGCCCCGAC+CGG | - | chr6_4:26308626-26308645 | Msa0983160:CDS | 65.0% | |
TACAGCTCGGGCCGAAGACC+GGG | + | chr6_4:26308687-26308706 | None:intergenic | 65.0% | |
TCGGCCTCCGAACCGTACGT+GGG | + | chr6_4:26308726-26308745 | None:intergenic | 65.0% | |
GAGCCCCACCCCAGCAGTAA+TGG | - | chr6_4:26308744-26308763 | Msa0983160:intron | 65.0% | |
CCGCACCATTACTGCTGGGG+TGG | + | chr6_4:26308752-26308771 | None:intergenic | 65.0% | |
TGCACGGCTTTCGACCGGGA+CGG | - | chr6_4:26309610-26309629 | Msa0983160:CDS | 65.0% | |
CTTTCGACCGGGACGGGAAG+AGG | - | chr6_4:26309617-26309636 | Msa0983160:intron | 65.0% | |
TGACGCCCGACGGGCGATAA+AGG | + | chr6_4:26309692-26309711 | None:intergenic | 65.0% | |
TTATCGCCCGTCGGGCGTCA+AGG | - | chr6_4:26309692-26309711 | Msa0983160:CDS | 65.0% | |
TGCGAACCTTGACGCCCGAC+GGG | + | chr6_4:26309701-26309720 | None:intergenic | 65.0% | |
!! | TCCGGGTGCTGTTGGACGGA+CGG | - | chr6_4:26309955-26309974 | Msa0983160:intron | 65.0% |
TCCGTCCGTCCAACAGCACC+CGG | + | chr6_4:26309959-26309978 | None:intergenic | 65.0% | |
!! | GGCTGGCCTTCCAGCGGTAG+TGG | + | chr6_4:26308236-26308255 | None:intergenic | 70.0% |
CTACCGCTGGAAGGCCAGCC+GGG | - | chr6_4:26308236-26308255 | Msa0983160:intron | 70.0% | |
!!! | CGGCCCGGGGCTGGCTTTTT+GGG | + | chr6_4:26308287-26308306 | None:intergenic | 70.0% |
CCAAAAAGCCAGCCCCGGGC+CGG | - | chr6_4:26308285-26308304 | Msa0983160:intron | 70.0% | |
CAAAAAGCCAGCCCCGGGCC+GGG | - | chr6_4:26308286-26308305 | Msa0983160:intron | 70.0% | |
AAAAAGCCAGCCCCGGGCCG+GGG | - | chr6_4:26308287-26308306 | Msa0983160:intron | 70.0% | |
TTCTATGCCGACCCCGGCCC+GGG | + | chr6_4:26308301-26308320 | None:intergenic | 70.0% | |
GGGTTGCGGGCGGAGAAGAG+CGG | - | chr6_4:26308365-26308384 | Msa0983160:intron | 70.0% | |
GGGCGGAGAAGAGCGGACGT+GGG | - | chr6_4:26308372-26308391 | Msa0983160:intron | 70.0% | |
GGCGGAGAAGAGCGGACGTG+GGG | - | chr6_4:26308373-26308392 | Msa0983160:intron | 70.0% | |
GCGGACGTGGGGACTCAGAC+CGG | - | chr6_4:26308384-26308403 | Msa0983160:intron | 70.0% | |
CGGACGTGGGGACTCAGACC+GGG | - | chr6_4:26308385-26308404 | Msa0983160:intron | 70.0% | |
GGACGTGGGGACTCAGACCG+GGG | - | chr6_4:26308386-26308405 | Msa0983160:intron | 70.0% | |
AGACCCAGCAGCTGCCGGTC+GGG | + | chr6_4:26308643-26308662 | None:intergenic | 70.0% | |
GAGACCCAGCAGCTGCCGGT+CGG | + | chr6_4:26308644-26308663 | None:intergenic | 70.0% | |
TGGGGAGACCCAGCAGCTGC+CGG | + | chr6_4:26308648-26308667 | None:intergenic | 70.0% | |
ACAGCTCGGGCCGAAGACCG+GGG | + | chr6_4:26308686-26308705 | None:intergenic | 70.0% | |
! | TCGCCCCACGTACGGTTCGG+AGG | - | chr6_4:26308719-26308738 | Msa0983160:intron | 70.0% |
CGGCCTCCGAACCGTACGTG+GGG | + | chr6_4:26308725-26308744 | None:intergenic | 70.0% | |
CTCGGCCTCCGAACCGTACG+TGG | + | chr6_4:26308727-26308746 | None:intergenic | 70.0% | |
GCACGGCTTTCGACCGGGAC+GGG | - | chr6_4:26309611-26309630 | Msa0983160:CDS | 70.0% | |
AAGCCCAGAGCAAGGGGGGC+TGG | - | chr6_4:26309759-26309778 | Msa0983160:CDS | 70.0% | |
AGCCCAGAGCAAGGGGGGCT+GGG | - | chr6_4:26309760-26309779 | Msa0983160:CDS | 70.0% | |
TTCCCACCGCGCTCACGGCC+CGG | + | chr6_4:26308257-26308276 | None:intergenic | 75.0% | |
GGCCGTGAGCGCGGTGGGAA+CGG | - | chr6_4:26308257-26308276 | Msa0983160:intron | 75.0% | |
GCCGTGAGCGCGGTGGGAAC+GGG | - | chr6_4:26308258-26308277 | Msa0983160:intron | 75.0% | |
GCCCGTTCCCACCGCGCTCA+CGG | + | chr6_4:26308262-26308281 | None:intergenic | 75.0% | |
!!! | CCGGCCCGGGGCTGGCTTTT+TGG | + | chr6_4:26308288-26308307 | None:intergenic | 75.0% |
TCTATGCCGACCCCGGCCCG+GGG | + | chr6_4:26308300-26308319 | None:intergenic | 75.0% | |
CGGGCGGAGAAGAGCGGACG+TGG | - | chr6_4:26308371-26308390 | Msa0983160:intron | 75.0% | |
ATGGGCGGGCACGAGCGGTC+TGG | - | chr6_4:26308452-26308471 | Msa0983160:intron | 75.0% | |
GACCCAGCAGCTGCCGGTCG+GGG | + | chr6_4:26308642-26308661 | None:intergenic | 75.0% | |
CAGCTCGGGCCGAAGACCGG+GGG | + | chr6_4:26308685-26308704 | None:intergenic | 75.0% | |
GCCCAGAGCAAGGGGGGCTG+GGG | - | chr6_4:26309761-26309780 | Msa0983160:CDS | 75.0% | |
CCCCCAGCCCCCCTTGCTCT+GGG | + | chr6_4:26309765-26309784 | None:intergenic | 75.0% | |
CCCAGAGCAAGGGGGGCTGG+GGG | - | chr6_4:26309762-26309781 | Msa0983160:CDS | 75.0% | |
CCAGAGCAAGGGGGGCTGGG+GGG | - | chr6_4:26309763-26309782 | Msa0983160:CDS | 75.0% | |
CAGAGCAAGGGGGGCTGGGG+GGG | - | chr6_4:26309764-26309783 | Msa0983160:CDS | 75.0% | |
AGAGCAAGGGGGGCTGGGGG+GGG | - | chr6_4:26309765-26309784 | Msa0983160:CDS | 75.0% | |
!!! | CGGCCCGGCTGGCCTTCCAG+CGG | + | chr6_4:26308242-26308261 | None:intergenic | 80.0% |
! | AGCCGGGCCGTGAGCGCGGT+GGG | - | chr6_4:26308252-26308271 | Msa0983160:intron | 80.0% |
! | AGCAGCTGCCGGTCGGGGCG+GGG | + | chr6_4:26308637-26308656 | None:intergenic | 80.0% |
! | CAGCAGCTGCCGGTCGGGGC+GGG | + | chr6_4:26308638-26308657 | None:intergenic | 80.0% |
! | CCAGCAGCTGCCGGTCGGGG+CGG | + | chr6_4:26308639-26308658 | None:intergenic | 80.0% |
! | CGCCCCGACCGGCAGCTGCT+GGG | - | chr6_4:26308637-26308656 | Msa0983160:CDS | 80.0% |
! | CCCCCCAGCCCCCCTTGCTC+TGG | + | chr6_4:26309766-26309785 | None:intergenic | 80.0% |
! | GGCCAGCCGGGCCGTGAGCG+CGG | - | chr6_4:26308248-26308267 | Msa0983160:intron | 85.0% |
! | CACCGCGCTCACGGCCCGGC+TGG | + | chr6_4:26308253-26308272 | None:intergenic | 85.0% |
! | CAGCCGGGCCGTGAGCGCGG+TGG | - | chr6_4:26308251-26308270 | Msa0983160:intron | 85.0% |
! | AGCCAGCCCCGGGCCGGGGT+CGG | - | chr6_4:26308291-26308310 | Msa0983160:intron | 85.0% |
! | CCGCCCCGACCGGCAGCTGC+TGG | - | chr6_4:26308636-26308655 | Msa0983160:CDS | 85.0% |
! | TGCCGACCCCGGCCCGGGGC+TGG | + | chr6_4:26308296-26308315 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 26308018 | 26310478 | 26308018 | ID=Msa0983160;Name=Msa0983160 |
chr6_4 | mRNA | 26308018 | 26310478 | 26308018 | ID=Msa0983160-mRNA-1;Parent=Msa0983160;Name=Msa0983160-mRNA-1;_AED=0.24;_eAED=0.31;_QI=0|0|0|1|0|0.12|8|0|475 |
chr6_4 | exon | 26310367 | 26310478 | 26310367 | ID=Msa0983160-mRNA-1:exon:7391;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26310107 | 26310247 | 26310107 | ID=Msa0983160-mRNA-1:exon:7390;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26309646 | 26309867 | 26309646 | ID=Msa0983160-mRNA-1:exon:7389;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26309408 | 26309630 | 26309408 | ID=Msa0983160-mRNA-1:exon:7388;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26309155 | 26309392 | 26309155 | ID=Msa0983160-mRNA-1:exon:7387;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26308783 | 26308906 | 26308783 | ID=Msa0983160-mRNA-1:exon:7386;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26308596 | 26308734 | 26308596 | ID=Msa0983160-mRNA-1:exon:7385;Parent=Msa0983160-mRNA-1 |
chr6_4 | exon | 26308018 | 26308246 | 26308018 | ID=Msa0983160-mRNA-1:exon:7384;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26310367 | 26310478 | 26310367 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26310107 | 26310247 | 26310107 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26309646 | 26309867 | 26309646 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26309408 | 26309630 | 26309408 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26309155 | 26309392 | 26309155 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26308783 | 26308906 | 26308783 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26308596 | 26308734 | 26308596 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
chr6_4 | CDS | 26308018 | 26308246 | 26308018 | ID=Msa0983160-mRNA-1:cds;Parent=Msa0983160-mRNA-1 |
Gene Sequence |
Protein sequence |