Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920060 | KEH16850.1 | 83.236 | 513 | 22 | 4 | 1 | 449 | 1 | 513 | 0.0 | 815 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920060 | sp|Q04050|NU4M_BRACM | 95.322 | 171 | 8 | 0 | 278 | 448 | 155 | 325 | 1.95e-104 | 322 |
| Msa0920060 | sp|Q04050|NU4M_BRACM | 91.503 | 153 | 13 | 0 | 1 | 153 | 1 | 153 | 6.13e-90 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa0920060 | 0.873630 | 1.267310e-67 | -8.615850e-47 |
| Msa0069510 | Msa0920060 | 0.839637 | 1.406699e-57 | -8.615850e-47 |
| Msa0069520 | Msa0920060 | 0.821438 | 4.037049e-53 | -8.615850e-47 |
| Msa0697990 | Msa0920060 | 0.841501 | 4.573275e-58 | -8.615850e-47 |
| Msa0595640 | Msa0920060 | 0.887598 | 1.239668e-72 | -8.615850e-47 |
| Msa0908820 | Msa0920060 | 0.852794 | 3.652948e-61 | -8.615850e-47 |
| Msa0908830 | Msa0920060 | 0.866515 | 2.694388e-65 | -8.615850e-47 |
| Msa0908840 | Msa0920060 | 0.830978 | 2.165727e-55 | -8.615850e-47 |
| Msa0908850 | Msa0920060 | 0.885484 | 7.815623e-72 | -8.615850e-47 |
| Msa0908870 | Msa0920060 | 0.851921 | 6.476683e-61 | -8.615850e-47 |
| Msa0908920 | Msa0920060 | 0.819545 | 1.097927e-52 | -8.615850e-47 |
| Msa0908930 | Msa0920060 | 0.823264 | 1.521284e-53 | -8.615850e-47 |
| Msa0919990 | Msa0920060 | 0.840909 | 6.546354e-58 | -8.615850e-47 |
| Msa0920000 | Msa0920060 | 0.851551 | 8.243616e-61 | -8.615850e-47 |
| Msa0920020 | Msa0920060 | 0.826723 | 2.319214e-54 | -8.615850e-47 |
| Msa0920060 | Msa0944900 | 0.865672 | 4.983872e-65 | -8.615850e-47 |
| Msa0920060 | Msa0944920 | 0.879436 | 1.248155e-69 | -8.615850e-47 |
| Msa0920060 | Msa0944930 | 0.827231 | 1.753621e-54 | -8.615850e-47 |
| Msa0920060 | Msa0944940 | 0.859423 | 4.178528e-63 | -8.615850e-47 |
| Msa0920060 | Msa0944950 | 0.848128 | 7.465778e-60 | -8.615850e-47 |
| Msa0920060 | Msa0944990 | 0.814789 | 1.288223e-51 | -8.615850e-47 |
| Msa0920060 | Msa0983130 | 0.857963 | 1.140297e-62 | -8.615850e-47 |
| Msa0920060 | Msa0983160 | 0.831328 | 1.776106e-55 | -8.615850e-47 |
| Msa0920060 | Msa0983170 | 0.859183 | 4.932987e-63 | -8.615850e-47 |
| Msa0920060 | Msa0983180 | 0.828630 | 8.081161e-55 | -8.615850e-47 |
| Msa0920060 | Msa0983190 | 0.880512 | 5.166456e-70 | -8.615850e-47 |
| Msa0920060 | Msa0983210 | 0.833541 | 5.025690e-56 | -8.615850e-47 |
| Msa0920060 | Msa0983220 | 0.838050 | 3.620002e-57 | -8.615850e-47 |
| Msa0920060 | Msa0983230 | 0.813007 | 3.182929e-51 | -8.615850e-47 |
| Msa0920060 | Msa0983260 | 0.817528 | 3.147402e-52 | -8.615850e-47 |
| Msa0920060 | Msa0983300 | 0.957337 | 3.460862e-115 | -8.615850e-47 |
| Msa0920060 | Msa0983320 | 0.813150 | 2.961355e-51 | -8.615850e-47 |
| Msa0920060 | Msa0983350 | 0.895515 | 8.909316e-76 | -8.615850e-47 |
| Msa0920060 | Msa0983360 | 0.845417 | 4.114565e-59 | -8.615850e-47 |
| Msa0920060 | Msa0983460 | 0.906727 | 1.088929e-80 | -8.615850e-47 |
| Msa0920060 | Msa0983490 | 0.840502 | 8.364608e-58 | -8.615850e-47 |
| Msa0920060 | Msa0983500 | 0.846362 | 2.278204e-59 | -8.615850e-47 |
| Msa0920060 | Msa0983520 | 0.882236 | 1.234065e-70 | -8.615850e-47 |
| Msa0920060 | Msa0983530 | 0.823630 | 1.248948e-53 | -8.615850e-47 |
| Msa0920060 | Msa0983540 | 0.858621 | 7.267153e-63 | -8.615850e-47 |
| Msa0920060 | Msa0983550 | 0.858376 | 8.594815e-63 | -8.615850e-47 |
| Msa0920060 | Msa1224580 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa0920060 | Msa1228620 | 0.819687 | 1.018797e-52 | -8.615850e-47 |
| Msa0920060 | Msa1391960 | 0.834565 | 2.784427e-56 | -8.615850e-47 |
| Msa0920060 | Msa1391970 | 0.893193 | 7.890755e-75 | -8.615850e-47 |
| Msa0920060 | Msa1391980 | 0.815794 | 7.700879e-52 | -8.615850e-47 |
| Msa0920060 | Msa1391990 | 0.802617 | 5.153502e-49 | -8.615850e-47 |
| Msa0920060 | Msa1392010 | 0.817278 | 3.582501e-52 | -8.615850e-47 |
| Msa0920060 | Msa1392030 | 0.948629 | 6.452232e-107 | -8.615850e-47 |
| Msa0920060 | Msa1392120 | 0.903915 | 2.116717e-79 | -8.615850e-47 |
| Msa0920060 | Msa1392160 | 0.907849 | 3.246970e-81 | -8.615850e-47 |
| Msa0920060 | Msa1436930 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0920060 | Msa1453860 | 0.861100 | 1.300294e-63 | -8.615850e-47 |
| Msa0920060 | Msa1453870 | 0.811369 | 7.245262e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920060 | MtrunA17_MTg0491541 | 99.422 | 173 | 1 | 0 | 1 | 173 | 1 | 173 | 1.45e-120 | 349 |
| Msa0920060 | MtrunA17_MTg0491571 | 99.351 | 154 | 1 | 0 | 307 | 460 | 1 | 154 | 4.40e-103 | 303 |
| Msa0920060 | MtrunA17_CPg0492231 | 38.953 | 172 | 101 | 3 | 278 | 446 | 151 | 321 | 2.35e-26 | 111 |
| Msa0920060 | MtrunA17_Chr4g0016261 | 38.953 | 172 | 101 | 3 | 278 | 446 | 151 | 321 | 2.35e-26 | 111 |
| Msa0920060 | MtrunA17_Chr7g0221901 | 36.774 | 155 | 94 | 3 | 278 | 429 | 151 | 304 | 1.49e-20 | 92.0 |
| Msa0920060 | MtrunA17_Chr7g0245851 | 37.584 | 149 | 90 | 2 | 303 | 448 | 96 | 244 | 4.63e-18 | 87.4 |
| Msa0920060 | MtrunA17_Chr4g0000781 | 39.326 | 89 | 54 | 0 | 336 | 424 | 31 | 119 | 1.43e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920060 | ATMG00580.1 | 95.322 | 171 | 8 | 0 | 278 | 448 | 155 | 325 | 1.11e-105 | 323 |
| Msa0920060 | ATMG00580.1 | 90.850 | 153 | 14 | 0 | 1 | 153 | 1 | 153 | 1.28e-89 | 281 |
| Msa0920060 | ATCG01050.1 | 36.970 | 165 | 100 | 3 | 278 | 439 | 156 | 319 | 1.04e-24 | 107 |
Find 138 sgRNAs with CRISPR-Local
Find 666 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGGTCGTATTCTTGAATT+TGG | 0.135250 | 6_2:+53407538 | None:intergenic |
| CCTTACTCTACCATTATTAT+AGG | 0.168884 | 6_2:-53405764 | Msa0920060:CDS |
| GGCAGGAATTCCTTCAAAAT+TGG | 0.199829 | 6_2:-53405459 | Msa0920060:CDS |
| CTTACTCTACCATTATTATA+GGG | 0.238983 | 6_2:-53405763 | Msa0920060:CDS |
| CAACCCACTAAAATACAAAT+AGG | 0.258973 | 6_2:+53407322 | None:intergenic |
| CTATGGTACCTGTTCATATT+TGG | 0.260516 | 6_2:-53405529 | Msa0920060:CDS |
| ATTCCTCGTCAAGTCAGTTT+AGG | 0.302645 | 6_2:-53406817 | Msa0920060:CDS |
| TTCCTCGTCAAGTCAGTTTA+GGG | 0.325740 | 6_2:-53406816 | Msa0920060:CDS |
| ATAGGGATTAGCACGCTTTC+GGG | 0.326260 | 6_2:+53407190 | None:intergenic |
| TGGACACACTTGCGCGAATT+CGG | 0.333350 | 6_2:-53406789 | Msa0920060:CDS |
| CCACCGGTAAATACCGCTTT+GGG | 0.350622 | 6_2:-53405793 | Msa0920060:CDS |
| CATAGGGATTAGCACGCTTT+CGG | 0.354669 | 6_2:+53407189 | None:intergenic |
| AATTGAGATTTGGCCGTAGA+AGG | 0.368282 | 6_2:+53407445 | None:intergenic |
| GCTTTCCACAAATTGAGATT+TGG | 0.369783 | 6_2:+53407435 | None:intergenic |
| CATATGAATCTGGTGACTAT+TGG | 0.369787 | 6_2:-53405272 | Msa0920060:CDS |
| AGCGGCGCCAAATCTTTCTA+TGG | 0.370679 | 6_2:-53405586 | Msa0920060:CDS |
| GGCCCCAAAGCGGTATTTAC+CGG | 0.383288 | 6_2:+53405790 | None:intergenic |
| ACCCCATACCCCTATAATAA+TGG | 0.383720 | 6_2:+53405754 | None:intergenic |
| CAGATCCAAGTAAAGTATAA+AGG | 0.388161 | 6_2:+53405693 | None:intergenic |
| ACCAACCCGCCTGCTGTGGC+GGG | 0.391103 | 6_2:+53406648 | None:intergenic |
| TCGAATTGTATCCGAGGAAC+AGG | 0.391620 | 6_2:+53407469 | None:intergenic |
| TGGTCTGGTATGAGAAGTTA+TGG | 0.393011 | 6_2:-53407301 | Msa0920060:CDS |
| GGACACACTTGCGCGAATTC+GGG | 0.399654 | 6_2:-53406788 | Msa0920060:CDS |
| CTCAGTAGCCCATATGAATC+TGG | 0.399943 | 6_2:-53405282 | Msa0920060:CDS |
| AAGCAATCCATAGAAAGATT+TGG | 0.399968 | 6_2:+53405579 | None:intergenic |
| GCAGGAATTCCTTCAAAATT+GGG | 0.401849 | 6_2:-53405458 | Msa0920060:CDS |
| AAAAGCCGCCCCGCCACAGC+AGG | 0.402678 | 6_2:-53406657 | Msa0920060:CDS |
| TGACTATTGGTATGTTTAGT+CGG | 0.404377 | 6_2:-53405259 | Msa0920060:CDS |
| TTGGTTCCTCTGTCGTCGCC+GGG | 0.410131 | 6_2:-53406630 | Msa0920060:CDS |
| ACCACCGGTAAATACCGCTT+TGG | 0.411729 | 6_2:-53405794 | Msa0920060:CDS |
| GTTGTGTTTGTTCGCGAGAA+TGG | 0.414062 | 6_2:-53406840 | Msa0920060:CDS |
| AGGTGCCTCTACATGAGCTT+CGG | 0.414244 | 6_2:+53405502 | None:intergenic |
| GGTTAATGATATTTGTAAAT+CGG | 0.416720 | 6_2:+53405622 | None:intergenic |
| TGTCGTCGCCGGGGAGCTCT+TGG | 0.418155 | 6_2:-53406620 | Msa0920060:intron |
| CTACCATTATTATAGGGGTA+TGG | 0.418456 | 6_2:-53405757 | Msa0920060:CDS |
| CTTGAATTTGGAATGAAAAG+AGG | 0.422041 | 6_2:+53407550 | None:intergenic |
| GGTGCTCCTAGGTGTGTGTA+GGG | 0.429310 | 6_2:-53406863 | Msa0920060:CDS |
| GCTGAGCATCTTCTATTCGC+TGG | 0.430029 | 6_2:-53407157 | Msa0920060:CDS |
| CCTATAATAATGGTAGAGTA+AGG | 0.430488 | 6_2:+53405764 | None:intergenic |
| CAATAGTCACCAGATTCATA+TGG | 0.432659 | 6_2:+53405273 | None:intergenic |
| TACGGCCAAATCTCAATTTG+TGG | 0.433634 | 6_2:-53407440 | Msa0920060:CDS |
| AGTGGAACAAAGTGTTGCTT+CGG | 0.433644 | 6_2:+53405397 | None:intergenic |
| GGGTGCTCCTAGGTGTGTGT+AGG | 0.434974 | 6_2:-53406864 | Msa0920060:CDS |
| TACCATTATTATAGGGGTAT+GGG | 0.437852 | 6_2:-53405756 | Msa0920060:CDS |
| AACCAACCCGCCTGCTGTGG+CGG | 0.439341 | 6_2:+53406647 | None:intergenic |
| AACCCACTAAAATACAAATA+GGG | 0.439795 | 6_2:+53407323 | None:intergenic |
| GACTATTGGTATGTTTAGTC+GGG | 0.443793 | 6_2:-53405258 | Msa0920060:CDS |
| GTTGGTTCCTCTGTCGTCGC+CGG | 0.449106 | 6_2:-53406631 | Msa0920060:CDS |
| GGTGCCTCTACATGAGCTTC+GGG | 0.458004 | 6_2:+53405503 | None:intergenic |
| AGAAGGGAGTGGCTACCTAC+TGG | 0.458710 | 6_2:-53405831 | Msa0920060:intron |
| CCTAGCACGGGACACAGAAT+AGG | 0.476428 | 6_2:+53407583 | None:intergenic |
| GTTTACGTCCATCCCTGGTT+GGG | 0.481674 | 6_2:+53406729 | None:intergenic |
| GATCGCCGTGTTCCGCATGC+TGG | 0.481676 | 6_2:-53407236 | Msa0920060:CDS |
| TTAGTCGGGCGGCGGCCGTT+AGG | 0.483853 | 6_2:-53405244 | Msa0920060:CDS |
| ATGCAGGAAGGGGTGCTCCT+AGG | 0.490368 | 6_2:-53406874 | Msa0920060:intron |
| TACGAGTTTACGTCCATCCC+TGG | 0.491127 | 6_2:+53406724 | None:intergenic |
| AAGTGTTGCTTCGGGAAACA+TGG | 0.492432 | 6_2:+53405406 | None:intergenic |
| CCCCGCCACAGCAGGCGGGT+TGG | 0.492715 | 6_2:-53406649 | Msa0920060:CDS |
| CCTATTCTGTGTCCCGTGCT+AGG | 0.494168 | 6_2:-53407583 | Msa0920060:CDS |
| GCCGCCCCGCCACAGCAGGC+GGG | 0.494974 | 6_2:-53406653 | Msa0920060:CDS |
| AAAGCGGTATTTACCGGTGG+TGG | 0.495298 | 6_2:+53405796 | None:intergenic |
| GCAGGATCCGTCATCTTGGC+AGG | 0.496212 | 6_2:-53405476 | Msa0920060:CDS |
| AGGAATAATGCTTCCTAGCA+CGG | 0.496785 | 6_2:+53407570 | None:intergenic |
| TGCTCAGCTCCGCACAACAT+AGG | 0.497448 | 6_2:+53407172 | None:intergenic |
| TCGGGTAACCAAATATGAAC+AGG | 0.498282 | 6_2:+53405521 | None:intergenic |
| CCTTCAAAATTGGGAGCCCA+CGG | 0.499065 | 6_2:-53405449 | Msa0920060:CDS |
| TACGGCAGGATCCGTCATCT+TGG | 0.499811 | 6_2:-53405480 | Msa0920060:CDS |
| GTGGAACAAAGTGTTGCTTC+GGG | 0.501640 | 6_2:+53405398 | None:intergenic |
| AGTTTACGTCCATCCCTGGT+TGG | 0.505541 | 6_2:+53406728 | None:intergenic |
| GCTCAGCTCCGCACAACATA+GGG | 0.513596 | 6_2:+53407173 | None:intergenic |
| GATACAATTCGATCCTTCTA+CGG | 0.522369 | 6_2:-53407458 | Msa0920060:CDS |
| CTTCAAAATTGGGAGCCCAC+GGG | 0.524867 | 6_2:-53405448 | Msa0920060:CDS |
| ATACGACCGATACGATTGAT+TGG | 0.528813 | 6_2:-53407526 | Msa0920060:CDS |
| CATGTAGAGGCACCTACGGC+AGG | 0.529345 | 6_2:-53405494 | Msa0920060:CDS |
| AGCTCATGTAGAGGCACCTA+CGG | 0.533300 | 6_2:-53405498 | Msa0920060:CDS |
| AGGTACCATAGGCACTTTGA+CGG | 0.533408 | 6_2:+53405541 | None:intergenic |
| AATTTGTGGAAAGCCTTCGA+TGG | 0.535645 | 6_2:-53407426 | Msa0920060:CDS |
| CTGAGCATCTTCTATTCGCT+GGG | 0.537805 | 6_2:-53407156 | Msa0920060:CDS |
| AAAGGAAACTGTACCCAACC+AGG | 0.539875 | 6_2:-53406742 | Msa0920060:CDS |
| TATATTATAGCAATCGCGCT+TGG | 0.540160 | 6_2:+53405359 | None:intergenic |
| GGTCTGGTATGAGAAGTTAT+GGG | 0.541884 | 6_2:-53407300 | Msa0920060:CDS |
| AGGCACTTTGACGGCGAAAG+CGG | 0.545031 | 6_2:+53405550 | None:intergenic |
| TTTCGCCGTCAAAGTGCCTA+TGG | 0.548155 | 6_2:-53405546 | Msa0920060:CDS |
| ACCATTATTATAGGGGTATG+GGG | 0.550253 | 6_2:-53405755 | Msa0920060:CDS |
| AATAGTCACCAGATTCATAT+GGG | 0.550546 | 6_2:+53405274 | None:intergenic |
| GAGCTCCCCGGCGACGACAG+AGG | 0.552407 | 6_2:+53406624 | None:intergenic |
| CAAATATGAACAGGTACCAT+AGG | 0.552504 | 6_2:+53405530 | None:intergenic |
| CCAACCCGCCTGCTGTGGCG+GGG | 0.553181 | 6_2:+53406649 | None:intergenic |
| TATAATAATGGTAGAGTAAG+GGG | 0.556711 | 6_2:+53405766 | None:intergenic |
| GCGCCGCTCACTAAATTCTG+TGG | 0.557549 | 6_2:+53405601 | None:intergenic |
| TTACTCTACCATTATTATAG+GGG | 0.559727 | 6_2:-53405762 | Msa0920060:CDS |
| GAATTCGGGTAACGGCTACA+AGG | 0.560848 | 6_2:-53406774 | Msa0920060:CDS |
| TTCGAGACAAAGAAAGATCA+AGG | 0.562592 | 6_2:-53405732 | Msa0920060:CDS |
| CTATAATAATGGTAGAGTAA+GGG | 0.563231 | 6_2:+53405765 | None:intergenic |
| GGAATAATGCTTCCTAGCAC+GGG | 0.573690 | 6_2:+53407571 | None:intergenic |
| GAATGCTATTCTGATCTAAG+TGG | 0.575738 | 6_2:-53407607 | Msa0920060:CDS |
| CGGTATTTACCGGTGGTGGT+TGG | 0.576224 | 6_2:+53405800 | None:intergenic |
| AAACTGTACCCAACCAGGGA+TGG | 0.578580 | 6_2:-53406737 | Msa0920060:CDS |
| AGGAACCAACCCGCCTGCTG+TGG | 0.579814 | 6_2:+53406644 | None:intergenic |
| TCCTCGTCAAGTCAGTTTAG+GGG | 0.579948 | 6_2:-53406815 | Msa0920060:CDS |
| CGAATTGTATCCGAGGAACA+GGG | 0.581643 | 6_2:+53407470 | None:intergenic |
| TGGTATGTTTAGTCGGGCGG+CGG | 0.583973 | 6_2:-53405252 | Msa0920060:CDS |
| GAGCTTCGACCAACCACCAC+CGG | 0.587855 | 6_2:-53405809 | Msa0920060:CDS |
| AGGATCCAGCATGCGGAACA+CGG | 0.595698 | 6_2:+53407231 | None:intergenic |
| ACTTGCGCGAATTCGGGTAA+CGG | 0.596244 | 6_2:-53406782 | Msa0920060:CDS |
| ACCCGCCTGCTGTGGCGGGG+CGG | 0.597738 | 6_2:+53406652 | None:intergenic |
| AAGATCGATCTGTCTTGAAG+TGG | 0.597753 | 6_2:+53405325 | None:intergenic |
| TAATGATATTTGTAAATCGG+CGG | 0.599948 | 6_2:+53405625 | None:intergenic |
| ACTGCACAAGGCCCCTGCAG+AGG | 0.601152 | 6_2:+53407122 | None:intergenic |
| CCCAAAGCGGTATTTACCGG+TGG | 0.603166 | 6_2:+53405793 | None:intergenic |
| CAGATTCATATGGGCTACTG+AGG | 0.606327 | 6_2:+53405283 | None:intergenic |
| TTTCATAAGGAAGCCATCGA+AGG | 0.606479 | 6_2:+53407413 | None:intergenic |
| AGGAATTCCTGCCAAGATGA+CGG | 0.610085 | 6_2:+53405469 | None:intergenic |
| CCTCGTCAAGTCAGTTTAGG+GGG | 0.611634 | 6_2:-53406814 | Msa0920060:CDS |
| GGAAGAACATAGAATAGTAG+AGG | 0.611660 | 6_2:+53407211 | None:intergenic |
| AGTGTTGCTTCGGGAAACAT+GGG | 0.614943 | 6_2:+53405407 | None:intergenic |
| GCGCTTGGAGTATAAATGAA+AGG | 0.616251 | 6_2:+53405374 | None:intergenic |
| GATCTGTCTTGAAGTGGTCA+AGG | 0.616297 | 6_2:+53405331 | None:intergenic |
| GTGCTCCTAGGTGTGTGTAG+GGG | 0.617803 | 6_2:-53406862 | Msa0920060:CDS |
| TCTCCTCACCAAGAGCTCCC+CGG | 0.627837 | 6_2:+53406612 | None:intergenic |
| ACAAATAGGGATCAGAAATG+TGG | 0.629425 | 6_2:+53407336 | None:intergenic |
| CACAGACCAATCAATCGTAT+CGG | 0.634378 | 6_2:+53407520 | None:intergenic |
| TGGAGTATAAATGAAAGGAG+TGG | 0.637579 | 6_2:+53405379 | None:intergenic |
| GTTACCCGAAGCTCATGTAG+AGG | 0.641294 | 6_2:-53405507 | Msa0920060:CDS |
| AATTCGGGTAACGGCTACAA+GGG | 0.641669 | 6_2:-53406773 | Msa0920060:CDS |
| TATTGGTATGTTTAGTCGGG+CGG | 0.648004 | 6_2:-53405255 | Msa0920060:CDS |
| CACAACCCCTACACACACCT+AGG | 0.648185 | 6_2:+53406857 | None:intergenic |
| AAGATGACGGATCCTGCCGT+AGG | 0.649707 | 6_2:+53405482 | None:intergenic |
| CACCGGTAAATACCGCTTTG+GGG | 0.669348 | 6_2:-53405792 | Msa0920060:CDS |
| GTGCTAATCCCTATGTTGTG+CGG | 0.673804 | 6_2:-53407181 | Msa0920060:CDS |
| GAAGGATCGAATTGTATCCG+AGG | 0.679970 | 6_2:+53407463 | None:intergenic |
| TGGTTCCTCTGTCGTCGCCG+GGG | 0.681136 | 6_2:-53406629 | Msa0920060:CDS |
| ATAGTAGAGGATCCAGCATG+CGG | 0.689131 | 6_2:+53407224 | None:intergenic |
| GAATTGTATCCGAGGAACAG+GGG | 0.689498 | 6_2:+53407471 | None:intergenic |
| AAGGAAACTGTACCCAACCA+GGG | 0.689748 | 6_2:-53406741 | Msa0920060:CDS |
| AATAATGGTAGAGTAAGGGG+TGG | 0.693054 | 6_2:+53405769 | None:intergenic |
| TAACCACAGAATTTAGTGAG+CGG | 0.697275 | 6_2:-53405604 | Msa0920060:CDS |
| AGTAAGGGGTGGCCCCAAAG+CGG | 0.752566 | 6_2:+53405780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCCAAATTAAATAAAAAAG+GGG | + | chr6_2:53406706-53406725 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | + | chr6_2:53406707-53406726 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | + | chr6_2:53406708-53406727 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | - | chr6_2:53406708-53406727 | Msa0920060:intron | 15.0% |
| !! | TTCCAAATTAAATAAAAAAG+GGG | + | chr6_2:53406706-53406725 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | + | chr6_2:53406707-53406726 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | + | chr6_2:53406708-53406727 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | - | chr6_2:53406708-53406727 | Msa0920060:intron | 15.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | + | chr6_2:53405356-53405375 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | + | chr6_2:53405451-53405470 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | - | chr6_2:53405453-53405472 | Msa0920060:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | - | chr6_2:53405454-53405473 | Msa0920060:CDS | 20.0% |
| !! | ATTGGGAAAAAAAAACAAAT+TGG | - | chr6_2:53406511-53406530 | Msa0920060:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | - | chr6_2:53406701-53406720 | Msa0920060:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | - | chr6_2:53406709-53406728 | Msa0920060:intron | 20.0% |
| !!! | TTTTTCCTTTATACTTTACT+TGG | - | chr6_2:53407150-53407169 | Msa0920060:CDS | 20.0% |
| !! | GGTTAATGATATTTGTAAAT+CGG | + | chr6_2:53407229-53407248 | None:intergenic | 20.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | + | chr6_2:53405356-53405375 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | + | chr6_2:53405451-53405470 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | - | chr6_2:53405453-53405472 | Msa0920060:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | - | chr6_2:53405454-53405473 | Msa0920060:CDS | 20.0% |
| !! | ATTGGGAAAAAAAAACAAAT+TGG | - | chr6_2:53406511-53406530 | Msa0920060:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | - | chr6_2:53406701-53406720 | Msa0920060:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | - | chr6_2:53406709-53406728 | Msa0920060:intron | 20.0% |
| !!! | TTTTTCCTTTATACTTTACT+TGG | - | chr6_2:53407150-53407169 | Msa0920060:CDS | 20.0% |
| !! | GGTTAATGATATTTGTAAAT+CGG | + | chr6_2:53407229-53407248 | None:intergenic | 20.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | - | chr6_2:53405463-53405482 | Msa0920060:CDS | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | - | chr6_2:53405523-53405542 | Msa0920060:CDS | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | + | chr6_2:53405528-53405547 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | + | chr6_2:53406175-53406194 | None:intergenic | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | + | chr6_2:53406425-53406444 | None:intergenic | 25.0% |
| !! | AAGTAATAGCCTTTCTTTTA+TGG | + | chr6_2:53406587-53406606 | None:intergenic | 25.0% |
| ! | TAATATACATGCATAGATAG+TGG | - | chr6_2:53406920-53406939 | Msa0920060:intron | 25.0% |
| ! | TATAATAATGGTAGAGTAAG+GGG | + | chr6_2:53407085-53407104 | None:intergenic | 25.0% |
| ! | CTATAATAATGGTAGAGTAA+GGG | + | chr6_2:53407086-53407105 | None:intergenic | 25.0% |
| ! | CTTACTCTACCATTATTATA+GGG | - | chr6_2:53407085-53407104 | Msa0920060:intron | 25.0% |
| ! | TTACTCTACCATTATTATAG+GGG | - | chr6_2:53407086-53407105 | Msa0920060:intron | 25.0% |
| !!! | TGTTGATTCTTTTCCAAATA+GGG | - | chr6_2:53407199-53407218 | Msa0920060:CDS | 25.0% |
| ! | TAATGATATTTGTAAATCGG+CGG | + | chr6_2:53407226-53407245 | None:intergenic | 25.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | - | chr6_2:53405463-53405482 | Msa0920060:CDS | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | - | chr6_2:53405523-53405542 | Msa0920060:CDS | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | + | chr6_2:53405528-53405547 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | + | chr6_2:53406175-53406194 | None:intergenic | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | + | chr6_2:53406425-53406444 | None:intergenic | 25.0% |
| !! | AAGTAATAGCCTTTCTTTTA+TGG | + | chr6_2:53406587-53406606 | None:intergenic | 25.0% |
| ! | TAATATACATGCATAGATAG+TGG | - | chr6_2:53406920-53406939 | Msa0920060:intron | 25.0% |
| ! | TATAATAATGGTAGAGTAAG+GGG | + | chr6_2:53407085-53407104 | None:intergenic | 25.0% |
| ! | CTATAATAATGGTAGAGTAA+GGG | + | chr6_2:53407086-53407105 | None:intergenic | 25.0% |
| ! | CTTACTCTACCATTATTATA+GGG | - | chr6_2:53407085-53407104 | Msa0920060:intron | 25.0% |
| ! | TTACTCTACCATTATTATAG+GGG | - | chr6_2:53407086-53407105 | Msa0920060:intron | 25.0% |
| !!! | TGTTGATTCTTTTCCAAATA+GGG | - | chr6_2:53407199-53407218 | Msa0920060:CDS | 25.0% |
| ! | TAATGATATTTGTAAATCGG+CGG | + | chr6_2:53407226-53407245 | None:intergenic | 25.0% |
| ! | CTTGAATTTGGAATGAAAAG+AGG | + | chr6_2:53405301-53405320 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | - | chr6_2:53405522-53405541 | Msa0920060:CDS | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | + | chr6_2:53405529-53405548 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | - | chr6_2:53405527-53405546 | Msa0920060:CDS | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | + | chr6_2:53406262-53406281 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | - | chr6_2:53406264-53406283 | Msa0920060:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | - | chr6_2:53406265-53406284 | Msa0920060:intron | 30.0% | |
| !!! | GCATTTCCTTTTTTTTAAGG+GGG | + | chr6_2:53406362-53406381 | None:intergenic | 30.0% |
| !!! | CGCATTTCCTTTTTTTTAAG+GGG | + | chr6_2:53406363-53406382 | None:intergenic | 30.0% |
| !!! | CCGCATTTCCTTTTTTTTAA+GGG | + | chr6_2:53406364-53406383 | None:intergenic | 30.0% |
| CCCTTAAAAAAAAGGAAATG+CGG | - | chr6_2:53406361-53406380 | Msa0920060:intron | 30.0% | |
| CCTTAAAAAAAAGGAAATGC+GGG | - | chr6_2:53406362-53406381 | Msa0920060:intron | 30.0% | |
| !! | CTTATCTGAATCTTTAAGAC+GGG | + | chr6_2:53406424-53406443 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCCCAATTCTCC+TGG | + | chr6_2:53406506-53406525 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | + | chr6_2:53406695-53406714 | None:intergenic | 30.0% | |
| TATGCATGTATATTAAGCCT+GGG | + | chr6_2:53406915-53406934 | None:intergenic | 30.0% | |
| CCTATAATAATGGTAGAGTA+AGG | + | chr6_2:53407087-53407106 | None:intergenic | 30.0% | |
| CCTTACTCTACCATTATTAT+AGG | - | chr6_2:53407084-53407103 | Msa0920060:intron | 30.0% | |
| ! | TACCATTATTATAGGGGTAT+GGG | - | chr6_2:53407092-53407111 | Msa0920060:intron | 30.0% |
| CAGATCCAAGTAAAGTATAA+AGG | + | chr6_2:53407158-53407177 | None:intergenic | 30.0% | |
| !!! | CTGTTGATTCTTTTCCAAAT+AGG | - | chr6_2:53407198-53407217 | Msa0920060:CDS | 30.0% |
| AAGCAATCCATAGAAAGATT+TGG | + | chr6_2:53407272-53407291 | None:intergenic | 30.0% | |
| TGAAAATCTTAAAAACCCGT+GGG | + | chr6_2:53407418-53407437 | None:intergenic | 30.0% | |
| TTGAAAATCTTAAAAACCCG+TGG | + | chr6_2:53407419-53407438 | None:intergenic | 30.0% | |
| AATAGTCACCAGATTCATAT+GGG | + | chr6_2:53407577-53407596 | None:intergenic | 30.0% | |
| TGACTATTGGTATGTTTAGT+CGG | - | chr6_2:53407589-53407608 | Msa0920060:CDS | 30.0% | |
| ACTAAAAATAGGTGACCTAA+CGG | + | chr6_2:53407622-53407641 | None:intergenic | 30.0% | |
| ! | CTTGAATTTGGAATGAAAAG+AGG | + | chr6_2:53405301-53405320 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | - | chr6_2:53405522-53405541 | Msa0920060:CDS | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | + | chr6_2:53405529-53405548 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | - | chr6_2:53405527-53405546 | Msa0920060:CDS | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | + | chr6_2:53406262-53406281 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | - | chr6_2:53406264-53406283 | Msa0920060:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | - | chr6_2:53406265-53406284 | Msa0920060:intron | 30.0% | |
| !!! | GCATTTCCTTTTTTTTAAGG+GGG | + | chr6_2:53406362-53406381 | None:intergenic | 30.0% |
| !!! | CGCATTTCCTTTTTTTTAAG+GGG | + | chr6_2:53406363-53406382 | None:intergenic | 30.0% |
| !!! | CCGCATTTCCTTTTTTTTAA+GGG | + | chr6_2:53406364-53406383 | None:intergenic | 30.0% |
| CCCTTAAAAAAAAGGAAATG+CGG | - | chr6_2:53406361-53406380 | Msa0920060:intron | 30.0% | |
| CCTTAAAAAAAAGGAAATGC+GGG | - | chr6_2:53406362-53406381 | Msa0920060:intron | 30.0% | |
| !! | CTTATCTGAATCTTTAAGAC+GGG | + | chr6_2:53406424-53406443 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCCCAATTCTCC+TGG | + | chr6_2:53406506-53406525 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | + | chr6_2:53406695-53406714 | None:intergenic | 30.0% | |
| TATGCATGTATATTAAGCCT+GGG | + | chr6_2:53406915-53406934 | None:intergenic | 30.0% | |
| CCTATAATAATGGTAGAGTA+AGG | + | chr6_2:53407087-53407106 | None:intergenic | 30.0% | |
| CCTTACTCTACCATTATTAT+AGG | - | chr6_2:53407084-53407103 | Msa0920060:intron | 30.0% | |
| ! | TACCATTATTATAGGGGTAT+GGG | - | chr6_2:53407092-53407111 | Msa0920060:intron | 30.0% |
| CAGATCCAAGTAAAGTATAA+AGG | + | chr6_2:53407158-53407177 | None:intergenic | 30.0% | |
| !!! | CTGTTGATTCTTTTCCAAAT+AGG | - | chr6_2:53407198-53407217 | Msa0920060:CDS | 30.0% |
| AAGCAATCCATAGAAAGATT+TGG | + | chr6_2:53407272-53407291 | None:intergenic | 30.0% | |
| TGAAAATCTTAAAAACCCGT+GGG | + | chr6_2:53407418-53407437 | None:intergenic | 30.0% | |
| TTGAAAATCTTAAAAACCCG+TGG | + | chr6_2:53407419-53407438 | None:intergenic | 30.0% | |
| AATAGTCACCAGATTCATAT+GGG | + | chr6_2:53407577-53407596 | None:intergenic | 30.0% | |
| TGACTATTGGTATGTTTAGT+CGG | - | chr6_2:53407589-53407608 | Msa0920060:CDS | 30.0% | |
| ACTAAAAATAGGTGACCTAA+CGG | + | chr6_2:53407622-53407641 | None:intergenic | 30.0% | |
| GAATGCTATTCTGATCTAAG+TGG | - | chr6_2:53405241-53405260 | Msa0920060:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | + | chr6_2:53405313-53405332 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | - | chr6_2:53405390-53405409 | Msa0920060:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | + | chr6_2:53405416-53405435 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | + | chr6_2:53405515-53405534 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | + | chr6_2:53405640-53405659 | None:intergenic | 35.0% | |
| ! | GGACACATCTTTTTCCTTTT+GGG | - | chr6_2:53405887-53405906 | Msa0920060:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | - | chr6_2:53405891-53405910 | Msa0920060:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | + | chr6_2:53406305-53406324 | None:intergenic | 35.0% | |
| !!! | CCCGCATTTCCTTTTTTTTA+AGG | + | chr6_2:53406365-53406384 | None:intergenic | 35.0% |
| ATCTCTCTCTCTAGATATCT+AGG | - | chr6_2:53406611-53406630 | Msa0920060:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | - | chr6_2:53406612-53406631 | Msa0920060:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | + | chr6_2:53406891-53406910 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | + | chr6_2:53406892-53406911 | None:intergenic | 35.0% |
| CTATGCATGTATATTAAGCC+TGG | + | chr6_2:53406916-53406935 | None:intergenic | 35.0% | |
| ! | TAGATAGTGGTCTAATGACA+AGG | - | chr6_2:53406933-53406952 | Msa0920060:intron | 35.0% |
| ! | AGATAGTGGTCTAATGACAA+GGG | - | chr6_2:53406934-53406953 | Msa0920060:intron | 35.0% |
| CTACCATTATTATAGGGGTA+TGG | - | chr6_2:53407091-53407110 | Msa0920060:intron | 35.0% | |
| ! | ACCATTATTATAGGGGTATG+GGG | - | chr6_2:53407093-53407112 | Msa0920060:intron | 35.0% |
| TTCGAGACAAAGAAAGATCA+AGG | - | chr6_2:53407116-53407135 | Msa0920060:intron | 35.0% | |
| TAACCACAGAATTTAGTGAG+CGG | - | chr6_2:53407244-53407263 | Msa0920060:CDS | 35.0% | |
| CAAATATGAACAGGTACCAT+AGG | + | chr6_2:53407321-53407340 | None:intergenic | 35.0% | |
| CTATGGTACCTGTTCATATT+TGG | - | chr6_2:53407319-53407338 | Msa0920060:CDS | 35.0% | |
| GCAGGAATTCCTTCAAAATT+GGG | - | chr6_2:53407390-53407409 | Msa0920060:CDS | 35.0% | |
| TGGAGTATAAATGAAAGGAG+TGG | + | chr6_2:53407472-53407491 | None:intergenic | 35.0% | |
| TATATTATAGCAATCGCGCT+TGG | + | chr6_2:53407492-53407511 | None:intergenic | 35.0% | |
| CAATAGTCACCAGATTCATA+TGG | + | chr6_2:53407578-53407597 | None:intergenic | 35.0% | |
| CATATGAATCTGGTGACTAT+TGG | - | chr6_2:53407576-53407595 | Msa0920060:CDS | 35.0% | |
| GACTATTGGTATGTTTAGTC+GGG | - | chr6_2:53407590-53407609 | Msa0920060:CDS | 35.0% | |
| GAATGCTATTCTGATCTAAG+TGG | - | chr6_2:53405241-53405260 | Msa0920060:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | + | chr6_2:53405313-53405332 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | - | chr6_2:53405390-53405409 | Msa0920060:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | + | chr6_2:53405416-53405435 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | + | chr6_2:53405515-53405534 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | + | chr6_2:53405640-53405659 | None:intergenic | 35.0% | |
| ! | GGACACATCTTTTTCCTTTT+GGG | - | chr6_2:53405887-53405906 | Msa0920060:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | - | chr6_2:53405891-53405910 | Msa0920060:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | + | chr6_2:53406305-53406324 | None:intergenic | 35.0% | |
| !!! | CCCGCATTTCCTTTTTTTTA+AGG | + | chr6_2:53406365-53406384 | None:intergenic | 35.0% |
| ATCTCTCTCTCTAGATATCT+AGG | - | chr6_2:53406611-53406630 | Msa0920060:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | - | chr6_2:53406612-53406631 | Msa0920060:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | + | chr6_2:53406891-53406910 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | + | chr6_2:53406892-53406911 | None:intergenic | 35.0% |
| CTATGCATGTATATTAAGCC+TGG | + | chr6_2:53406916-53406935 | None:intergenic | 35.0% | |
| ! | TAGATAGTGGTCTAATGACA+AGG | - | chr6_2:53406933-53406952 | Msa0920060:intron | 35.0% |
| ! | AGATAGTGGTCTAATGACAA+GGG | - | chr6_2:53406934-53406953 | Msa0920060:intron | 35.0% |
| CTACCATTATTATAGGGGTA+TGG | - | chr6_2:53407091-53407110 | Msa0920060:intron | 35.0% | |
| ! | ACCATTATTATAGGGGTATG+GGG | - | chr6_2:53407093-53407112 | Msa0920060:intron | 35.0% |
| TTCGAGACAAAGAAAGATCA+AGG | - | chr6_2:53407116-53407135 | Msa0920060:intron | 35.0% | |
| TAACCACAGAATTTAGTGAG+CGG | - | chr6_2:53407244-53407263 | Msa0920060:CDS | 35.0% | |
| CAAATATGAACAGGTACCAT+AGG | + | chr6_2:53407321-53407340 | None:intergenic | 35.0% | |
| CTATGGTACCTGTTCATATT+TGG | - | chr6_2:53407319-53407338 | Msa0920060:CDS | 35.0% | |
| GCAGGAATTCCTTCAAAATT+GGG | - | chr6_2:53407390-53407409 | Msa0920060:CDS | 35.0% | |
| TGGAGTATAAATGAAAGGAG+TGG | + | chr6_2:53407472-53407491 | None:intergenic | 35.0% | |
| TATATTATAGCAATCGCGCT+TGG | + | chr6_2:53407492-53407511 | None:intergenic | 35.0% | |
| CAATAGTCACCAGATTCATA+TGG | + | chr6_2:53407578-53407597 | None:intergenic | 35.0% | |
| CATATGAATCTGGTGACTAT+TGG | - | chr6_2:53407576-53407595 | Msa0920060:CDS | 35.0% | |
| GACTATTGGTATGTTTAGTC+GGG | - | chr6_2:53407590-53407609 | Msa0920060:CDS | 35.0% | |
| AGGAATAATGCTTCCTAGCA+CGG | + | chr6_2:53405281-53405300 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | - | chr6_2:53405322-53405341 | Msa0920060:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | + | chr6_2:53405331-53405350 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | - | chr6_2:53405368-53405387 | Msa0920060:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | + | chr6_2:53405406-53405425 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | - | chr6_2:53405408-53405427 | Msa0920060:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | - | chr6_2:53405422-53405441 | Msa0920060:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | + | chr6_2:53405438-53405457 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | - | chr6_2:53405532-53405551 | Msa0920060:CDS | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | - | chr6_2:53405547-53405566 | Msa0920060:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | - | chr6_2:53405548-53405567 | Msa0920060:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | - | chr6_2:53405714-53405733 | Msa0920060:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | - | chr6_2:53405715-53405734 | Msa0920060:CDS | 40.0% |
| !! | ATTTCTGGTCAACTGCACAA+GGG | - | chr6_2:53405833-53405852 | Msa0920060:intron | 40.0% |
| ! | CGGACACATCTTTTTCCTTT+TGG | - | chr6_2:53405886-53405905 | Msa0920060:intron | 40.0% |
| ! | CACATCTTTTTCCTTTTGGG+AGG | - | chr6_2:53405890-53405909 | Msa0920060:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | - | chr6_2:53405962-53405981 | Msa0920060:intron | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | - | chr6_2:53405963-53405982 | Msa0920060:intron | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | - | chr6_2:53405964-53405983 | Msa0920060:intron | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+AGG | - | chr6_2:53406031-53406050 | Msa0920060:intron | 40.0% | |
| TTCCTCGTCAAGTCAGTTTA+GGG | - | chr6_2:53406032-53406051 | Msa0920060:intron | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | - | chr6_2:53406088-53406107 | Msa0920060:intron | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | - | chr6_2:53406268-53406287 | Msa0920060:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | - | chr6_2:53406269-53406288 | Msa0920060:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | + | chr6_2:53406304-53406323 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | - | chr6_2:53406312-53406331 | Msa0920060:intron | 40.0% | |
| CTTTGGCCCCCTTAAAAAAA+AGG | - | chr6_2:53406353-53406372 | Msa0920060:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | - | chr6_2:53406366-53406385 | Msa0920060:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | - | chr6_2:53406367-53406386 | Msa0920060:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | + | chr6_2:53406456-53406475 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | + | chr6_2:53406461-53406480 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | + | chr6_2:53406475-53406494 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | - | chr6_2:53406480-53406499 | Msa0920060:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | + | chr6_2:53406539-53406558 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | - | chr6_2:53406753-53406772 | Msa0920060:CDS | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | - | chr6_2:53406758-53406777 | Msa0920060:CDS | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | - | chr6_2:53406759-53406778 | Msa0920060:CDS | 40.0% | |
| AATAATGGTAGAGTAAGGGG+TGG | + | chr6_2:53407082-53407101 | None:intergenic | 40.0% | |
| ACCCCATACCCCTATAATAA+TGG | + | chr6_2:53407097-53407116 | None:intergenic | 40.0% | |
| TCGGGTAACCAAATATGAAC+AGG | + | chr6_2:53407330-53407349 | None:intergenic | 40.0% | |
| GGCAGGAATTCCTTCAAAAT+TGG | - | chr6_2:53407389-53407408 | Msa0920060:CDS | 40.0% | |
| !! | AGTGGAACAAAGTGTTGCTT+CGG | + | chr6_2:53407454-53407473 | None:intergenic | 40.0% |
| GCGCTTGGAGTATAAATGAA+AGG | + | chr6_2:53407477-53407496 | None:intergenic | 40.0% | |
| AAGATCGATCTGTCTTGAAG+TGG | + | chr6_2:53407526-53407545 | None:intergenic | 40.0% | |
| TATTGGTATGTTTAGTCGGG+CGG | - | chr6_2:53407593-53407612 | Msa0920060:CDS | 40.0% | |
| AGGAATAATGCTTCCTAGCA+CGG | + | chr6_2:53405281-53405300 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | - | chr6_2:53405322-53405341 | Msa0920060:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | + | chr6_2:53405331-53405350 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | - | chr6_2:53405368-53405387 | Msa0920060:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | + | chr6_2:53405406-53405425 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | - | chr6_2:53405408-53405427 | Msa0920060:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | - | chr6_2:53405422-53405441 | Msa0920060:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | + | chr6_2:53405438-53405457 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | - | chr6_2:53405532-53405551 | Msa0920060:CDS | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | - | chr6_2:53405547-53405566 | Msa0920060:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | - | chr6_2:53405548-53405567 | Msa0920060:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | - | chr6_2:53405714-53405733 | Msa0920060:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | - | chr6_2:53405715-53405734 | Msa0920060:CDS | 40.0% |
| !! | ATTTCTGGTCAACTGCACAA+GGG | - | chr6_2:53405833-53405852 | Msa0920060:intron | 40.0% |
| ! | CGGACACATCTTTTTCCTTT+TGG | - | chr6_2:53405886-53405905 | Msa0920060:intron | 40.0% |
| ! | CACATCTTTTTCCTTTTGGG+AGG | - | chr6_2:53405890-53405909 | Msa0920060:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | - | chr6_2:53405962-53405981 | Msa0920060:intron | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | - | chr6_2:53405963-53405982 | Msa0920060:intron | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | - | chr6_2:53405964-53405983 | Msa0920060:intron | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+AGG | - | chr6_2:53406031-53406050 | Msa0920060:intron | 40.0% | |
| TTCCTCGTCAAGTCAGTTTA+GGG | - | chr6_2:53406032-53406051 | Msa0920060:intron | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | - | chr6_2:53406088-53406107 | Msa0920060:intron | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | - | chr6_2:53406268-53406287 | Msa0920060:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | - | chr6_2:53406269-53406288 | Msa0920060:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | + | chr6_2:53406304-53406323 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | - | chr6_2:53406312-53406331 | Msa0920060:intron | 40.0% | |
| CTTTGGCCCCCTTAAAAAAA+AGG | - | chr6_2:53406353-53406372 | Msa0920060:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | - | chr6_2:53406366-53406385 | Msa0920060:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | - | chr6_2:53406367-53406386 | Msa0920060:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | + | chr6_2:53406456-53406475 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | + | chr6_2:53406461-53406480 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | + | chr6_2:53406475-53406494 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | - | chr6_2:53406480-53406499 | Msa0920060:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | + | chr6_2:53406539-53406558 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | - | chr6_2:53406753-53406772 | Msa0920060:CDS | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | - | chr6_2:53406758-53406777 | Msa0920060:CDS | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | - | chr6_2:53406759-53406778 | Msa0920060:CDS | 40.0% | |
| AATAATGGTAGAGTAAGGGG+TGG | + | chr6_2:53407082-53407101 | None:intergenic | 40.0% | |
| ACCCCATACCCCTATAATAA+TGG | + | chr6_2:53407097-53407116 | None:intergenic | 40.0% | |
| TCGGGTAACCAAATATGAAC+AGG | + | chr6_2:53407330-53407349 | None:intergenic | 40.0% | |
| GGCAGGAATTCCTTCAAAAT+TGG | - | chr6_2:53407389-53407408 | Msa0920060:CDS | 40.0% | |
| !! | AGTGGAACAAAGTGTTGCTT+CGG | + | chr6_2:53407454-53407473 | None:intergenic | 40.0% |
| GCGCTTGGAGTATAAATGAA+AGG | + | chr6_2:53407477-53407496 | None:intergenic | 40.0% | |
| AAGATCGATCTGTCTTGAAG+TGG | + | chr6_2:53407526-53407545 | None:intergenic | 40.0% | |
| TATTGGTATGTTTAGTCGGG+CGG | - | chr6_2:53407593-53407612 | Msa0920060:CDS | 40.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | + | chr6_2:53405280-53405299 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | + | chr6_2:53405380-53405399 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | + | chr6_2:53405381-53405400 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | + | chr6_2:53405382-53405401 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | + | chr6_2:53405388-53405407 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | + | chr6_2:53405627-53405646 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | + | chr6_2:53405661-53405680 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | + | chr6_2:53405662-53405681 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | - | chr6_2:53405667-53405686 | Msa0920060:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | - | chr6_2:53405692-53405711 | Msa0920060:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | - | chr6_2:53405713-53405732 | Msa0920060:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | - | chr6_2:53405818-53405837 | Msa0920060:CDS | 45.0% | |
| !! | CATTTCTGGTCAACTGCACA+AGG | - | chr6_2:53405832-53405851 | Msa0920060:intron | 45.0% |
| ! | AGGTTCGGTTCGTCTTAGTT+CGG | + | chr6_2:53405864-53405883 | None:intergenic | 45.0% |
| AAAGATGTGTCCGTCAGGTT+CGG | + | chr6_2:53405879-53405898 | None:intergenic | 45.0% | |
| AGGAAAAAGATGTGTCCGTC+AGG | + | chr6_2:53405884-53405903 | None:intergenic | 45.0% | |
| TATCCATACAAGACCCGAGT+AGG | + | chr6_2:53405955-53405974 | None:intergenic | 45.0% | |
| GTTGTGTTTGTTCGCGAGAA+TGG | - | chr6_2:53406008-53406027 | Msa0920060:intron | 45.0% | |
| TCCTCGTCAAGTCAGTTTAG+GGG | - | chr6_2:53406033-53406052 | Msa0920060:intron | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | - | chr6_2:53406075-53406094 | Msa0920060:intron | 45.0% |
| AAAGGAAACTGTACCCAACC+AGG | - | chr6_2:53406106-53406125 | Msa0920060:intron | 45.0% | |
| AAGGAAACTGTACCCAACCA+GGG | - | chr6_2:53406107-53406126 | Msa0920060:intron | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | - | chr6_2:53406136-53406155 | Msa0920060:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | - | chr6_2:53406270-53406289 | Msa0920060:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | + | chr6_2:53406320-53406339 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | - | chr6_2:53406336-53406355 | Msa0920060:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | - | chr6_2:53406396-53406415 | Msa0920060:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | - | chr6_2:53406397-53406416 | Msa0920060:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | + | chr6_2:53406502-53406521 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | - | chr6_2:53406555-53406574 | Msa0920060:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | - | chr6_2:53406799-53406818 | Msa0920060:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | + | chr6_2:53406885-53406904 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | + | chr6_2:53406888-53406907 | None:intergenic | 45.0% |
| AGGTACCATAGGCACTTTGA+CGG | + | chr6_2:53407310-53407329 | None:intergenic | 45.0% | |
| AGGAATTCCTGCCAAGATGA+CGG | + | chr6_2:53407382-53407401 | None:intergenic | 45.0% | |
| !! | AGTGTTGCTTCGGGAAACAT+GGG | + | chr6_2:53407444-53407463 | None:intergenic | 45.0% |
| !! | AAGTGTTGCTTCGGGAAACA+TGG | + | chr6_2:53407445-53407464 | None:intergenic | 45.0% |
| !! | GTGGAACAAAGTGTTGCTTC+GGG | + | chr6_2:53407453-53407472 | None:intergenic | 45.0% |
| GATCTGTCTTGAAGTGGTCA+AGG | + | chr6_2:53407520-53407539 | None:intergenic | 45.0% | |
| ! | CAGATTCATATGGGCTACTG+AGG | + | chr6_2:53407568-53407587 | None:intergenic | 45.0% |
| CTCAGTAGCCCATATGAATC+TGG | - | chr6_2:53407566-53407585 | Msa0920060:CDS | 45.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | + | chr6_2:53405280-53405299 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | + | chr6_2:53405380-53405399 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | + | chr6_2:53405381-53405400 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | + | chr6_2:53405382-53405401 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | + | chr6_2:53405388-53405407 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | + | chr6_2:53405627-53405646 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | + | chr6_2:53405661-53405680 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | + | chr6_2:53405662-53405681 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | - | chr6_2:53405667-53405686 | Msa0920060:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | - | chr6_2:53405692-53405711 | Msa0920060:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | - | chr6_2:53405713-53405732 | Msa0920060:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | - | chr6_2:53405818-53405837 | Msa0920060:CDS | 45.0% | |
| !! | CATTTCTGGTCAACTGCACA+AGG | - | chr6_2:53405832-53405851 | Msa0920060:intron | 45.0% |
| ! | AGGTTCGGTTCGTCTTAGTT+CGG | + | chr6_2:53405864-53405883 | None:intergenic | 45.0% |
| AAAGATGTGTCCGTCAGGTT+CGG | + | chr6_2:53405879-53405898 | None:intergenic | 45.0% | |
| AGGAAAAAGATGTGTCCGTC+AGG | + | chr6_2:53405884-53405903 | None:intergenic | 45.0% | |
| TATCCATACAAGACCCGAGT+AGG | + | chr6_2:53405955-53405974 | None:intergenic | 45.0% | |
| GTTGTGTTTGTTCGCGAGAA+TGG | - | chr6_2:53406008-53406027 | Msa0920060:intron | 45.0% | |
| TCCTCGTCAAGTCAGTTTAG+GGG | - | chr6_2:53406033-53406052 | Msa0920060:intron | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | - | chr6_2:53406075-53406094 | Msa0920060:intron | 45.0% |
| AAAGGAAACTGTACCCAACC+AGG | - | chr6_2:53406106-53406125 | Msa0920060:intron | 45.0% | |
| AAGGAAACTGTACCCAACCA+GGG | - | chr6_2:53406107-53406126 | Msa0920060:intron | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | - | chr6_2:53406136-53406155 | Msa0920060:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | - | chr6_2:53406270-53406289 | Msa0920060:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | + | chr6_2:53406320-53406339 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | - | chr6_2:53406336-53406355 | Msa0920060:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | - | chr6_2:53406396-53406415 | Msa0920060:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | - | chr6_2:53406397-53406416 | Msa0920060:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | + | chr6_2:53406502-53406521 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | - | chr6_2:53406555-53406574 | Msa0920060:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | - | chr6_2:53406799-53406818 | Msa0920060:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | + | chr6_2:53406885-53406904 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | + | chr6_2:53406888-53406907 | None:intergenic | 45.0% |
| AGGTACCATAGGCACTTTGA+CGG | + | chr6_2:53407310-53407329 | None:intergenic | 45.0% | |
| AGGAATTCCTGCCAAGATGA+CGG | + | chr6_2:53407382-53407401 | None:intergenic | 45.0% | |
| !! | AGTGTTGCTTCGGGAAACAT+GGG | + | chr6_2:53407444-53407463 | None:intergenic | 45.0% |
| !! | AAGTGTTGCTTCGGGAAACA+TGG | + | chr6_2:53407445-53407464 | None:intergenic | 45.0% |
| !! | GTGGAACAAAGTGTTGCTTC+GGG | + | chr6_2:53407453-53407472 | None:intergenic | 45.0% |
| GATCTGTCTTGAAGTGGTCA+AGG | + | chr6_2:53407520-53407539 | None:intergenic | 45.0% | |
| ! | CAGATTCATATGGGCTACTG+AGG | + | chr6_2:53407568-53407587 | None:intergenic | 45.0% |
| CTCAGTAGCCCATATGAATC+TGG | - | chr6_2:53407566-53407585 | Msa0920060:CDS | 45.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | - | chr6_2:53405691-53405710 | Msa0920060:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | - | chr6_2:53405739-53405758 | Msa0920060:CDS | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | - | chr6_2:53405740-53405759 | Msa0920060:CDS | 50.0% | |
| CTAAGACGAACCGAACCTGA+CGG | - | chr6_2:53405866-53405885 | Msa0920060:intron | 50.0% | |
| ! | CGGGTCTTGTATGGATATGC+AGG | - | chr6_2:53405958-53405977 | Msa0920060:intron | 50.0% |
| CCTCGTCAAGTCAGTTTAGG+GGG | - | chr6_2:53406034-53406053 | Msa0920060:intron | 50.0% | |
| TCAAGTCAGTTTAGGGGGTG+TGG | - | chr6_2:53406039-53406058 | Msa0920060:intron | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | - | chr6_2:53406059-53406078 | Msa0920060:intron | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | - | chr6_2:53406066-53406085 | Msa0920060:intron | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | - | chr6_2:53406074-53406093 | Msa0920060:intron | 50.0% |
| AAACTGTACCCAACCAGGGA+TGG | - | chr6_2:53406111-53406130 | Msa0920060:intron | 50.0% | |
| GTTTACGTCCATCCCTGGTT+GGG | + | chr6_2:53406122-53406141 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCTGGT+TGG | + | chr6_2:53406123-53406142 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+TGG | + | chr6_2:53406127-53406146 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | - | chr6_2:53406135-53406154 | Msa0920060:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | + | chr6_2:53406155-53406174 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | - | chr6_2:53406319-53406338 | Msa0920060:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | - | chr6_2:53406494-53406513 | Msa0920060:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | - | chr6_2:53406556-53406575 | Msa0920060:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | - | chr6_2:53406557-53406576 | Msa0920060:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | + | chr6_2:53406659-53406678 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | - | chr6_2:53406662-53406681 | Msa0920060:CDS | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | + | chr6_2:53406688-53406707 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | - | chr6_2:53406800-53406819 | Msa0920060:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | + | chr6_2:53406860-53406879 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | + | chr6_2:53406861-53406880 | None:intergenic | 50.0% | |
| AGCAAAAGATTCGAGAGCCC+AGG | - | chr6_2:53406895-53406914 | Msa0920060:intron | 50.0% | |
| CGTGAGACTTCCGCATCATA+CGG | + | chr6_2:53406985-53407004 | None:intergenic | 50.0% | |
| TGATGCGGAAGTCTCACGTA+CGG | - | chr6_2:53406987-53407006 | Msa0920060:intron | 50.0% | |
| AAAGCGGTATTTACCGGTGG+TGG | + | chr6_2:53407055-53407074 | None:intergenic | 50.0% | |
| ACCACCGGTAAATACCGCTT+TGG | - | chr6_2:53407054-53407073 | Msa0920060:intron | 50.0% | |
| CCACCGGTAAATACCGCTTT+GGG | - | chr6_2:53407055-53407074 | Msa0920060:intron | 50.0% | |
| CACCGGTAAATACCGCTTTG+GGG | - | chr6_2:53407056-53407075 | Msa0920060:intron | 50.0% | |
| GTAAATCGGCGGTCCCTATT+TGG | + | chr6_2:53407215-53407234 | None:intergenic | 50.0% | |
| AGCGGCGCCAAATCTTTCTA+TGG | - | chr6_2:53407262-53407281 | Msa0920060:CDS | 50.0% | |
| ! | TTTCGCCGTCAAAGTGCCTA+TGG | - | chr6_2:53407302-53407321 | Msa0920060:CDS | 50.0% |
| GTTACCCGAAGCTCATGTAG+AGG | - | chr6_2:53407341-53407360 | Msa0920060:CDS | 50.0% | |
| AGGTGCCTCTACATGAGCTT+CGG | + | chr6_2:53407349-53407368 | None:intergenic | 50.0% | |
| !! | AGCTCATGTAGAGGCACCTA+CGG | - | chr6_2:53407350-53407369 | Msa0920060:CDS | 50.0% |
| CCTTCAAAATTGGGAGCCCA+CGG | - | chr6_2:53407399-53407418 | Msa0920060:CDS | 50.0% | |
| CTTCAAAATTGGGAGCCCAC+GGG | - | chr6_2:53407400-53407419 | Msa0920060:CDS | 50.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | - | chr6_2:53405691-53405710 | Msa0920060:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | - | chr6_2:53405739-53405758 | Msa0920060:CDS | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | - | chr6_2:53405740-53405759 | Msa0920060:CDS | 50.0% | |
| CTAAGACGAACCGAACCTGA+CGG | - | chr6_2:53405866-53405885 | Msa0920060:intron | 50.0% | |
| ! | CGGGTCTTGTATGGATATGC+AGG | - | chr6_2:53405958-53405977 | Msa0920060:intron | 50.0% |
| CCTCGTCAAGTCAGTTTAGG+GGG | - | chr6_2:53406034-53406053 | Msa0920060:intron | 50.0% | |
| TCAAGTCAGTTTAGGGGGTG+TGG | - | chr6_2:53406039-53406058 | Msa0920060:intron | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | - | chr6_2:53406059-53406078 | Msa0920060:intron | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | - | chr6_2:53406066-53406085 | Msa0920060:intron | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | - | chr6_2:53406074-53406093 | Msa0920060:intron | 50.0% |
| AAACTGTACCCAACCAGGGA+TGG | - | chr6_2:53406111-53406130 | Msa0920060:intron | 50.0% | |
| GTTTACGTCCATCCCTGGTT+GGG | + | chr6_2:53406122-53406141 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCTGGT+TGG | + | chr6_2:53406123-53406142 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+TGG | + | chr6_2:53406127-53406146 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | - | chr6_2:53406135-53406154 | Msa0920060:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | + | chr6_2:53406155-53406174 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | - | chr6_2:53406319-53406338 | Msa0920060:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | - | chr6_2:53406494-53406513 | Msa0920060:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | - | chr6_2:53406556-53406575 | Msa0920060:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | - | chr6_2:53406557-53406576 | Msa0920060:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | + | chr6_2:53406659-53406678 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | - | chr6_2:53406662-53406681 | Msa0920060:CDS | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | + | chr6_2:53406688-53406707 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | - | chr6_2:53406800-53406819 | Msa0920060:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | + | chr6_2:53406860-53406879 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | + | chr6_2:53406861-53406880 | None:intergenic | 50.0% | |
| AGCAAAAGATTCGAGAGCCC+AGG | - | chr6_2:53406895-53406914 | Msa0920060:intron | 50.0% | |
| CGTGAGACTTCCGCATCATA+CGG | + | chr6_2:53406985-53407004 | None:intergenic | 50.0% | |
| TGATGCGGAAGTCTCACGTA+CGG | - | chr6_2:53406987-53407006 | Msa0920060:intron | 50.0% | |
| AAAGCGGTATTTACCGGTGG+TGG | + | chr6_2:53407055-53407074 | None:intergenic | 50.0% | |
| ACCACCGGTAAATACCGCTT+TGG | - | chr6_2:53407054-53407073 | Msa0920060:intron | 50.0% | |
| CCACCGGTAAATACCGCTTT+GGG | - | chr6_2:53407055-53407074 | Msa0920060:intron | 50.0% | |
| CACCGGTAAATACCGCTTTG+GGG | - | chr6_2:53407056-53407075 | Msa0920060:intron | 50.0% | |
| GTAAATCGGCGGTCCCTATT+TGG | + | chr6_2:53407215-53407234 | None:intergenic | 50.0% | |
| AGCGGCGCCAAATCTTTCTA+TGG | - | chr6_2:53407262-53407281 | Msa0920060:CDS | 50.0% | |
| ! | TTTCGCCGTCAAAGTGCCTA+TGG | - | chr6_2:53407302-53407321 | Msa0920060:CDS | 50.0% |
| GTTACCCGAAGCTCATGTAG+AGG | - | chr6_2:53407341-53407360 | Msa0920060:CDS | 50.0% | |
| AGGTGCCTCTACATGAGCTT+CGG | + | chr6_2:53407349-53407368 | None:intergenic | 50.0% | |
| !! | AGCTCATGTAGAGGCACCTA+CGG | - | chr6_2:53407350-53407369 | Msa0920060:CDS | 50.0% |
| CCTTCAAAATTGGGAGCCCA+CGG | - | chr6_2:53407399-53407418 | Msa0920060:CDS | 50.0% | |
| CTTCAAAATTGGGAGCCCAC+GGG | - | chr6_2:53407400-53407419 | Msa0920060:CDS | 50.0% | |
| CCTAGCACGGGACACAGAAT+AGG | + | chr6_2:53405268-53405287 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | - | chr6_2:53405265-53405284 | Msa0920060:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | + | chr6_2:53405620-53405639 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | + | chr6_2:53405678-53405697 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | + | chr6_2:53405679-53405698 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | + | chr6_2:53405741-53405760 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | + | chr6_2:53405773-53405792 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | - | chr6_2:53405779-53405798 | Msa0920060:CDS | 55.0% | |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | + | chr6_2:53405904-53405923 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | + | chr6_2:53405921-53405940 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | + | chr6_2:53405951-53405970 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | + | chr6_2:53405952-53405971 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | - | chr6_2:53405985-53406004 | Msa0920060:intron | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | - | chr6_2:53405986-53406005 | Msa0920060:intron | 55.0% | |
| CACAACCCCTACACACACCT+AGG | + | chr6_2:53405994-53406013 | None:intergenic | 55.0% | |
| !! | CCCCCTAAACTGACTTGACG+AGG | + | chr6_2:53406037-53406056 | None:intergenic | 55.0% |
| GGACACACTTGCGCGAATTC+GGG | - | chr6_2:53406060-53406079 | Msa0920060:intron | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | - | chr6_2:53406140-53406159 | Msa0920060:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | - | chr6_2:53406141-53406160 | Msa0920060:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | - | chr6_2:53406154-53406173 | Msa0920060:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | - | chr6_2:53406243-53406262 | Msa0920060:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | - | chr6_2:53406273-53406292 | Msa0920060:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | - | chr6_2:53406322-53406341 | Msa0920060:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | - | chr6_2:53406377-53406396 | Msa0920060:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | - | chr6_2:53406384-53406403 | Msa0920060:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | - | chr6_2:53406493-53406512 | Msa0920060:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | - | chr6_2:53406558-53406577 | Msa0920060:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | - | chr6_2:53406735-53406754 | Msa0920060:CDS | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | + | chr6_2:53406787-53406806 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | + | chr6_2:53406788-53406807 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | + | chr6_2:53406789-53406808 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | - | chr6_2:53406790-53406809 | Msa0920060:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | + | chr6_2:53406797-53406816 | None:intergenic | 55.0% |
| CTAATGACAAGGGCCGACGA+CGG | - | chr6_2:53406944-53406963 | Msa0920060:intron | 55.0% | |
| TCACGTACGGTTCCCTGAGA+AGG | - | chr6_2:53407000-53407019 | Msa0920060:intron | 55.0% | |
| CACGTACGGTTCCCTGAGAA+GGG | - | chr6_2:53407001-53407020 | Msa0920060:intron | 55.0% | |
| AGGTAGCCACTCCCTTCTCA+GGG | + | chr6_2:53407015-53407034 | None:intergenic | 55.0% | |
| TAGGTAGCCACTCCCTTCTC+AGG | + | chr6_2:53407016-53407035 | None:intergenic | 55.0% | |
| AGAAGGGAGTGGCTACCTAC+TGG | - | chr6_2:53407017-53407036 | Msa0920060:intron | 55.0% | |
| ! | TGGTTGGTCGAAGCTCCAGT+AGG | + | chr6_2:53407035-53407054 | None:intergenic | 55.0% |
| ! | CGGTATTTACCGGTGGTGGT+TGG | + | chr6_2:53407051-53407070 | None:intergenic | 55.0% |
| CCCAAAGCGGTATTTACCGG+TGG | + | chr6_2:53407058-53407077 | None:intergenic | 55.0% | |
| GGCCCCAAAGCGGTATTTAC+CGG | + | chr6_2:53407061-53407080 | None:intergenic | 55.0% | |
| GCGCCGCTCACTAAATTCTG+TGG | + | chr6_2:53407250-53407269 | None:intergenic | 55.0% | |
| AGGCACTTTGACGGCGAAAG+CGG | + | chr6_2:53407301-53407320 | None:intergenic | 55.0% | |
| GGTGCCTCTACATGAGCTTC+GGG | + | chr6_2:53407348-53407367 | None:intergenic | 55.0% | |
| !! | AAGATGACGGATCCTGCCGT+AGG | + | chr6_2:53407369-53407388 | None:intergenic | 55.0% |
| TACGGCAGGATCCGTCATCT+TGG | - | chr6_2:53407368-53407387 | Msa0920060:CDS | 55.0% | |
| ! | CCGTGGGCTCCCAATTTTGA+AGG | + | chr6_2:53407402-53407421 | None:intergenic | 55.0% |
| TGGTATGTTTAGTCGGGCGG+CGG | - | chr6_2:53407596-53407615 | Msa0920060:CDS | 55.0% | |
| CCTAGCACGGGACACAGAAT+AGG | + | chr6_2:53405268-53405287 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | - | chr6_2:53405265-53405284 | Msa0920060:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | + | chr6_2:53405620-53405639 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | + | chr6_2:53405678-53405697 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | + | chr6_2:53405679-53405698 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | + | chr6_2:53405741-53405760 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | + | chr6_2:53405773-53405792 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | - | chr6_2:53405779-53405798 | Msa0920060:CDS | 55.0% | |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | + | chr6_2:53405904-53405923 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | + | chr6_2:53405921-53405940 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | + | chr6_2:53405951-53405970 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | + | chr6_2:53405952-53405971 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | - | chr6_2:53405985-53406004 | Msa0920060:intron | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | - | chr6_2:53405986-53406005 | Msa0920060:intron | 55.0% | |
| CACAACCCCTACACACACCT+AGG | + | chr6_2:53405994-53406013 | None:intergenic | 55.0% | |
| !! | CCCCCTAAACTGACTTGACG+AGG | + | chr6_2:53406037-53406056 | None:intergenic | 55.0% |
| GGACACACTTGCGCGAATTC+GGG | - | chr6_2:53406060-53406079 | Msa0920060:intron | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | - | chr6_2:53406140-53406159 | Msa0920060:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | - | chr6_2:53406141-53406160 | Msa0920060:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | - | chr6_2:53406154-53406173 | Msa0920060:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | - | chr6_2:53406243-53406262 | Msa0920060:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | - | chr6_2:53406273-53406292 | Msa0920060:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | - | chr6_2:53406322-53406341 | Msa0920060:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | - | chr6_2:53406377-53406396 | Msa0920060:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | - | chr6_2:53406384-53406403 | Msa0920060:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | - | chr6_2:53406493-53406512 | Msa0920060:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | - | chr6_2:53406558-53406577 | Msa0920060:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | - | chr6_2:53406735-53406754 | Msa0920060:CDS | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | + | chr6_2:53406787-53406806 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | + | chr6_2:53406788-53406807 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | + | chr6_2:53406789-53406808 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | - | chr6_2:53406790-53406809 | Msa0920060:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | + | chr6_2:53406797-53406816 | None:intergenic | 55.0% |
| CTAATGACAAGGGCCGACGA+CGG | - | chr6_2:53406944-53406963 | Msa0920060:intron | 55.0% | |
| TCACGTACGGTTCCCTGAGA+AGG | - | chr6_2:53407000-53407019 | Msa0920060:intron | 55.0% | |
| CACGTACGGTTCCCTGAGAA+GGG | - | chr6_2:53407001-53407020 | Msa0920060:intron | 55.0% | |
| AGGTAGCCACTCCCTTCTCA+GGG | + | chr6_2:53407015-53407034 | None:intergenic | 55.0% | |
| TAGGTAGCCACTCCCTTCTC+AGG | + | chr6_2:53407016-53407035 | None:intergenic | 55.0% | |
| AGAAGGGAGTGGCTACCTAC+TGG | - | chr6_2:53407017-53407036 | Msa0920060:intron | 55.0% | |
| ! | TGGTTGGTCGAAGCTCCAGT+AGG | + | chr6_2:53407035-53407054 | None:intergenic | 55.0% |
| ! | CGGTATTTACCGGTGGTGGT+TGG | + | chr6_2:53407051-53407070 | None:intergenic | 55.0% |
| CCCAAAGCGGTATTTACCGG+TGG | + | chr6_2:53407058-53407077 | None:intergenic | 55.0% | |
| GGCCCCAAAGCGGTATTTAC+CGG | + | chr6_2:53407061-53407080 | None:intergenic | 55.0% | |
| GCGCCGCTCACTAAATTCTG+TGG | + | chr6_2:53407250-53407269 | None:intergenic | 55.0% | |
| AGGCACTTTGACGGCGAAAG+CGG | + | chr6_2:53407301-53407320 | None:intergenic | 55.0% | |
| GGTGCCTCTACATGAGCTTC+GGG | + | chr6_2:53407348-53407367 | None:intergenic | 55.0% | |
| !! | AAGATGACGGATCCTGCCGT+AGG | + | chr6_2:53407369-53407388 | None:intergenic | 55.0% |
| TACGGCAGGATCCGTCATCT+TGG | - | chr6_2:53407368-53407387 | Msa0920060:CDS | 55.0% | |
| ! | CCGTGGGCTCCCAATTTTGA+AGG | + | chr6_2:53407402-53407421 | None:intergenic | 55.0% |
| TGGTATGTTTAGTCGGGCGG+CGG | - | chr6_2:53407596-53407615 | Msa0920060:CDS | 55.0% | |
| TGCAGTAAACCCCCTACGGG+CGG | - | chr6_2:53405743-53405762 | Msa0920060:CDS | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | - | chr6_2:53405780-53405799 | Msa0920060:CDS | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | + | chr6_2:53405788-53405807 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | + | chr6_2:53405789-53405808 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | + | chr6_2:53405790-53405809 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | - | chr6_2:53405787-53405806 | Msa0920060:CDS | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | - | chr6_2:53405788-53405807 | Msa0920060:CDS | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | - | chr6_2:53405906-53405925 | Msa0920060:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | - | chr6_2:53405907-53405926 | Msa0920060:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | - | chr6_2:53405918-53405937 | Msa0920060:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | - | chr6_2:53405949-53405968 | Msa0920060:intron | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | - | chr6_2:53405974-53405993 | Msa0920060:intron | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | - | chr6_2:53405984-53406003 | Msa0920060:intron | 60.0% | |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | - | chr6_2:53406217-53406236 | Msa0920060:intron | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | - | chr6_2:53406218-53406237 | Msa0920060:intron | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | + | chr6_2:53406239-53406258 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | - | chr6_2:53406383-53406402 | Msa0920060:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | - | chr6_2:53406485-53406504 | Msa0920060:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | - | chr6_2:53406561-53406580 | Msa0920060:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | + | chr6_2:53406570-53406589 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | - | chr6_2:53406575-53406594 | Msa0920060:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | + | chr6_2:53406644-53406663 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | - | chr6_2:53406721-53406740 | Msa0920060:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | - | chr6_2:53406730-53406749 | Msa0920060:CDS | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | + | chr6_2:53406785-53406804 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | + | chr6_2:53406786-53406805 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | - | chr6_2:53406810-53406829 | Msa0920060:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | - | chr6_2:53406811-53406830 | Msa0920060:CDS | 60.0% | |
| ACGGTTCCCTGAGAAGGGAG+TGG | - | chr6_2:53407006-53407025 | Msa0920060:intron | 60.0% | |
| GAGCTTCGACCAACCACCAC+CGG | - | chr6_2:53407039-53407058 | Msa0920060:intron | 60.0% | |
| AGTAAGGGGTGGCCCCAAAG+CGG | + | chr6_2:53407071-53407090 | None:intergenic | 60.0% | |
| !! | CATGTAGAGGCACCTACGGC+AGG | - | chr6_2:53407354-53407373 | Msa0920060:CDS | 60.0% |
| GCAGGATCCGTCATCTTGGC+AGG | - | chr6_2:53407372-53407391 | Msa0920060:CDS | 60.0% | |
| TGCAGTAAACCCCCTACGGG+CGG | - | chr6_2:53405743-53405762 | Msa0920060:CDS | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | - | chr6_2:53405780-53405799 | Msa0920060:CDS | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | + | chr6_2:53405788-53405807 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | + | chr6_2:53405789-53405808 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | + | chr6_2:53405790-53405809 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | - | chr6_2:53405787-53405806 | Msa0920060:CDS | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | - | chr6_2:53405788-53405807 | Msa0920060:CDS | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | - | chr6_2:53405906-53405925 | Msa0920060:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | - | chr6_2:53405907-53405926 | Msa0920060:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | - | chr6_2:53405918-53405937 | Msa0920060:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | - | chr6_2:53405949-53405968 | Msa0920060:intron | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | - | chr6_2:53405974-53405993 | Msa0920060:intron | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | - | chr6_2:53405984-53406003 | Msa0920060:intron | 60.0% | |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | - | chr6_2:53406217-53406236 | Msa0920060:intron | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | - | chr6_2:53406218-53406237 | Msa0920060:intron | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | + | chr6_2:53406239-53406258 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | - | chr6_2:53406383-53406402 | Msa0920060:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | - | chr6_2:53406485-53406504 | Msa0920060:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | - | chr6_2:53406561-53406580 | Msa0920060:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | + | chr6_2:53406570-53406589 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | - | chr6_2:53406575-53406594 | Msa0920060:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | + | chr6_2:53406644-53406663 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | - | chr6_2:53406721-53406740 | Msa0920060:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | - | chr6_2:53406730-53406749 | Msa0920060:CDS | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | + | chr6_2:53406785-53406804 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | + | chr6_2:53406786-53406805 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | - | chr6_2:53406810-53406829 | Msa0920060:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | - | chr6_2:53406811-53406830 | Msa0920060:CDS | 60.0% | |
| ACGGTTCCCTGAGAAGGGAG+TGG | - | chr6_2:53407006-53407025 | Msa0920060:intron | 60.0% | |
| GAGCTTCGACCAACCACCAC+CGG | - | chr6_2:53407039-53407058 | Msa0920060:intron | 60.0% | |
| AGTAAGGGGTGGCCCCAAAG+CGG | + | chr6_2:53407071-53407090 | None:intergenic | 60.0% | |
| !! | CATGTAGAGGCACCTACGGC+AGG | - | chr6_2:53407354-53407373 | Msa0920060:CDS | 60.0% |
| GCAGGATCCGTCATCTTGGC+AGG | - | chr6_2:53407372-53407391 | Msa0920060:CDS | 60.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | - | chr6_2:53405612-53405631 | Msa0920060:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | + | chr6_2:53405729-53405748 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | - | chr6_2:53405786-53405805 | Msa0920060:CDS | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | - | chr6_2:53405938-53405957 | Msa0920060:intron | 65.0% | |
| AACCAACCCGCCTGCTGTGG+CGG | + | chr6_2:53406204-53406223 | None:intergenic | 65.0% | |
| AGGAACCAACCCGCCTGCTG+TGG | + | chr6_2:53406207-53406226 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | - | chr6_2:53406219-53406238 | Msa0920060:intron | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | + | chr6_2:53406775-53406794 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | - | chr6_2:53406775-53406794 | Msa0920060:CDS | 65.0% | |
| AAGGGCCGACGACGGAAGCT+CGG | - | chr6_2:53406952-53406971 | Msa0920060:intron | 65.0% | |
| CGGGACGGAGCCGTATGATG+CGG | - | chr6_2:53406972-53406991 | Msa0920060:intron | 65.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | - | chr6_2:53405612-53405631 | Msa0920060:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | + | chr6_2:53405729-53405748 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | - | chr6_2:53405786-53405805 | Msa0920060:CDS | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | - | chr6_2:53405938-53405957 | Msa0920060:intron | 65.0% | |
| AACCAACCCGCCTGCTGTGG+CGG | + | chr6_2:53406204-53406223 | None:intergenic | 65.0% | |
| AGGAACCAACCCGCCTGCTG+TGG | + | chr6_2:53406207-53406226 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | - | chr6_2:53406219-53406238 | Msa0920060:intron | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | + | chr6_2:53406775-53406794 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | - | chr6_2:53406775-53406794 | Msa0920060:CDS | 65.0% | |
| AAGGGCCGACGACGGAAGCT+CGG | - | chr6_2:53406952-53406971 | Msa0920060:intron | 65.0% | |
| CGGGACGGAGCCGTATGATG+CGG | - | chr6_2:53406972-53406991 | Msa0920060:intron | 65.0% | |
| ACGACGGACGACCGCCCGTA+GGG | + | chr6_2:53405757-53405776 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | + | chr6_2:53405758-53405777 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | + | chr6_2:53405935-53405954 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | - | chr6_2:53405939-53405958 | Msa0920060:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | + | chr6_2:53405945-53405964 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | - | chr6_2:53406191-53406210 | Msa0920060:intron | 70.0% | |
| ACCAACCCGCCTGCTGTGGC+GGG | + | chr6_2:53406203-53406222 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | - | chr6_2:53406228-53406247 | Msa0920060:intron | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | - | chr6_2:53406233-53406252 | Msa0920060:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | - | chr6_2:53406815-53406834 | Msa0920060:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | - | chr6_2:53406816-53406835 | Msa0920060:CDS | 70.0% | |
| AGGGCCGACGACGGAAGCTC+GGG | - | chr6_2:53406953-53406972 | Msa0920060:intron | 70.0% | |
| CCGTCCCGAGCTTCCGTCGT+CGG | + | chr6_2:53406960-53406979 | None:intergenic | 70.0% | |
| CCGACGACGGAAGCTCGGGA+CGG | - | chr6_2:53406957-53406976 | Msa0920060:intron | 70.0% | |
| TTAGTCGGGCGGCGGCCGTT+AGG | - | chr6_2:53407604-53407623 | Msa0920060:CDS | 70.0% | |
| ACGACGGACGACCGCCCGTA+GGG | + | chr6_2:53405757-53405776 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | + | chr6_2:53405758-53405777 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | + | chr6_2:53405935-53405954 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | - | chr6_2:53405939-53405958 | Msa0920060:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | + | chr6_2:53405945-53405964 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | - | chr6_2:53406191-53406210 | Msa0920060:intron | 70.0% | |
| ACCAACCCGCCTGCTGTGGC+GGG | + | chr6_2:53406203-53406222 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | - | chr6_2:53406228-53406247 | Msa0920060:intron | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | - | chr6_2:53406233-53406252 | Msa0920060:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | - | chr6_2:53406815-53406834 | Msa0920060:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | - | chr6_2:53406816-53406835 | Msa0920060:CDS | 70.0% | |
| AGGGCCGACGACGGAAGCTC+GGG | - | chr6_2:53406953-53406972 | Msa0920060:intron | 70.0% | |
| CCGTCCCGAGCTTCCGTCGT+CGG | + | chr6_2:53406960-53406979 | None:intergenic | 70.0% | |
| CCGACGACGGAAGCTCGGGA+CGG | - | chr6_2:53406957-53406976 | Msa0920060:intron | 70.0% | |
| TTAGTCGGGCGGCGGCCGTT+AGG | - | chr6_2:53407604-53407623 | Msa0920060:CDS | 70.0% | |
| GACGGACGACCGCCCGTAGG+GGG | + | chr6_2:53405755-53405774 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | + | chr6_2:53405756-53405775 | None:intergenic | 75.0% | |
| CCAACCCGCCTGCTGTGGCG+GGG | + | chr6_2:53406202-53406221 | None:intergenic | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | + | chr6_2:53406227-53406246 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | - | chr6_2:53406824-53406843 | Msa0920060:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | - | chr6_2:53406825-53406844 | Msa0920060:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | + | chr6_2:53406837-53406856 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | + | chr6_2:53406842-53406861 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | + | chr6_2:53406843-53406862 | None:intergenic | 75.0% | |
| GACGGACGACCGCCCGTAGG+GGG | + | chr6_2:53405755-53405774 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | + | chr6_2:53405756-53405775 | None:intergenic | 75.0% | |
| CCAACCCGCCTGCTGTGGCG+GGG | + | chr6_2:53406202-53406221 | None:intergenic | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | + | chr6_2:53406227-53406246 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | - | chr6_2:53406824-53406843 | Msa0920060:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | - | chr6_2:53406825-53406844 | Msa0920060:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | + | chr6_2:53406837-53406856 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | + | chr6_2:53406842-53406861 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | + | chr6_2:53406843-53406862 | None:intergenic | 75.0% | |
| ! | AGCCGCCCCGCCACAGCAGG+CGG | - | chr6_2:53406194-53406213 | Msa0920060:intron | 80.0% |
| !! | ACCCGCCTGCTGTGGCGGGG+CGG | + | chr6_2:53406199-53406218 | None:intergenic | 80.0% |
| ! | CCCCGCCACAGCAGGCGGGT+TGG | - | chr6_2:53406199-53406218 | Msa0920060:intron | 80.0% |
| ! | AGCCGCCCCGCCACAGCAGG+CGG | - | chr6_2:53406194-53406213 | Msa0920060:intron | 80.0% |
| !! | ACCCGCCTGCTGTGGCGGGG+CGG | + | chr6_2:53406199-53406218 | None:intergenic | 80.0% |
| ! | CCCCGCCACAGCAGGCGGGT+TGG | - | chr6_2:53406199-53406218 | Msa0920060:intron | 80.0% |
| ! | GCCGCCCCGCCACAGCAGGC+GGG | - | chr6_2:53406195-53406214 | Msa0920060:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | - | chr6_2:53406828-53406847 | Msa0920060:CDS | 85.0% |
| ! | GCCGCCCCGCCACAGCAGGC+GGG | - | chr6_2:53406195-53406214 | Msa0920060:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | - | chr6_2:53406828-53406847 | Msa0920060:CDS | 85.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | - | chr6_2:53406829-53406848 | Msa0920060:CDS | 90.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | - | chr6_2:53406829-53406848 | Msa0920060:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53405223 | 53407647 | 53405223 | ID=Msa0920060;Name=Msa0920060 |
| chr6_2 | mRNA | 53405223 | 53407647 | 53405223 | ID=Msa0920060-mRNA-1;Parent=Msa0920060;Name=Msa0920060-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.75|1|1|4|0|460 |
| chr6_2 | exon | 53407129 | 53407647 | 53407129 | ID=Msa0920060-mRNA-1:exon:7983;Parent=Msa0920060-mRNA-1 |
| chr6_2 | exon | 53406727 | 53406890 | 53406727 | ID=Msa0920060-mRNA-1:exon:7982;Parent=Msa0920060-mRNA-1 |
| chr6_2 | exon | 53406621 | 53406694 | 53406621 | ID=Msa0920060-mRNA-1:exon:7981;Parent=Msa0920060-mRNA-1 |
| chr6_2 | exon | 53405223 | 53405848 | 53405223 | ID=Msa0920060-mRNA-1:exon:7980;Parent=Msa0920060-mRNA-1 |
| chr6_2 | CDS | 53407129 | 53407647 | 53407129 | ID=Msa0920060-mRNA-1:cds;Parent=Msa0920060-mRNA-1 |
| chr6_2 | CDS | 53406727 | 53406890 | 53406727 | ID=Msa0920060-mRNA-1:cds;Parent=Msa0920060-mRNA-1 |
| chr6_2 | CDS | 53406621 | 53406694 | 53406621 | ID=Msa0920060-mRNA-1:cds;Parent=Msa0920060-mRNA-1 |
| chr6_2 | CDS | 53405223 | 53405848 | 53405223 | ID=Msa0920060-mRNA-1:cds;Parent=Msa0920060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
