Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920000 | KEH16846.1 | 68.243 | 296 | 31 | 4 | 1 | 239 | 1 | 290 | 3.37e-123 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa0920000 | 0.932306 | 1.037211e-94 | -8.615850e-47 |
| Msa0595640 | Msa0920000 | 0.808112 | 3.633752e-50 | -8.615850e-47 |
| Msa0908820 | Msa0920000 | 0.809295 | 2.030247e-50 | -8.615850e-47 |
| Msa0920000 | Msa0920060 | 0.851551 | 8.243616e-61 | -8.615850e-47 |
| Msa0920000 | Msa0944900 | 0.831045 | 2.085207e-55 | -8.615850e-47 |
| Msa0920000 | Msa0944920 | 0.812887 | 3.381007e-51 | -8.615850e-47 |
| Msa0920000 | Msa0944940 | 0.805021 | 1.632451e-49 | -8.615850e-47 |
| Msa0920000 | Msa0944950 | 0.834009 | 3.840572e-56 | -8.615850e-47 |
| Msa0920000 | Msa0983160 | 0.825777 | 3.895104e-54 | -8.615850e-47 |
| Msa0920000 | Msa0983170 | 0.833938 | 4.000084e-56 | -8.615850e-47 |
| Msa0920000 | Msa0983190 | 0.813740 | 2.196336e-51 | -8.615850e-47 |
| Msa0920000 | Msa0983210 | 0.807233 | 5.586856e-50 | -8.615850e-47 |
| Msa0920000 | Msa0983220 | 0.812103 | 5.017607e-51 | -8.615850e-47 |
| Msa0920000 | Msa0983300 | 0.853549 | 2.219795e-61 | -8.615850e-47 |
| Msa0920000 | Msa0983350 | 0.926153 | 6.935053e-91 | -8.615850e-47 |
| Msa0920000 | Msa0983420 | 0.830156 | 3.442028e-55 | -8.615850e-47 |
| Msa0920000 | Msa0983490 | 0.811616 | 6.405255e-51 | -8.615850e-47 |
| Msa0920000 | Msa0983500 | 0.811108 | 8.255383e-51 | -8.615850e-47 |
| Msa0920000 | Msa0983520 | 0.807084 | 6.007492e-50 | -8.615850e-47 |
| Msa0920000 | Msa0983540 | 0.801899 | 7.241585e-49 | -8.615850e-47 |
| Msa0920000 | Msa0983550 | 0.835711 | 1.431535e-56 | -8.615850e-47 |
| Msa0920000 | Msa1391970 | 0.924705 | 4.924566e-90 | -8.615850e-47 |
| Msa0920000 | Msa1392030 | 0.847836 | 8.988236e-60 | -8.615850e-47 |
| Msa0920000 | Msa1392160 | 0.874625 | 5.832668e-68 | -8.615850e-47 |
| Msa0920000 | Msa1453870 | 0.817370 | 3.416448e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 98 sgRNAs with CRISPR-Local
Find 518 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGAGCGCTTATGTAATA+TGG | 0.207988 | 6_2:-53399265 | Msa0920000:CDS |
| CGCTCAGTCTTTGCAACGGC+TGG | 0.225653 | 6_2:-53399383 | Msa0920000:CDS |
| ATAAGCGCTCTTGGGTGGGC+TGG | 0.307064 | 6_2:+53399274 | None:intergenic |
| TGGCGGGCGGCAGGAGTTGC+GGG | 0.317316 | 6_2:-53400814 | Msa0920000:CDS |
| GCCCCTTCTCAAAGATTTGA+TGG | 0.329206 | 6_2:-53399303 | Msa0920000:CDS |
| CCGCCCGCTTGGCGGGCGGC+AGG | 0.344538 | 6_2:-53400823 | Msa0920000:CDS |
| GAAGAGTCTGGTCTGAATTC+AGG | 0.358398 | 6_2:+53400098 | None:intergenic |
| CCATATTACATAAGCGCTCT+TGG | 0.366917 | 6_2:+53399265 | None:intergenic |
| ATGGCTGGAAACAATCCTTA+TGG | 0.374342 | 6_2:-53399236 | Msa0920000:CDS |
| TCCTTACAGTTCTCTATGCC+GGG | 0.375787 | 6_2:+53400857 | None:intergenic |
| TCAACGGATCCTCCGCGCTC+CGG | 0.380707 | 6_2:-53400514 | Msa0920000:CDS |
| ATCTTATTCGTAGTTGGGAG+GGG | 0.382699 | 6_2:-53400326 | Msa0920000:intron |
| CGGCTTTGTTTGCCCTAGCT+TGG | 0.391819 | 6_2:-53399451 | Msa0920000:CDS |
| CGCCCGGTTCACTGGGCTGT+TGG | 0.400256 | 6_2:+53400776 | None:intergenic |
| CCAGGACAACTGAGATCTTC+CGG | 0.406192 | 6_2:+53400046 | None:intergenic |
| ATCCTTACAGTTCTCTATGC+CGG | 0.406330 | 6_2:+53400856 | None:intergenic |
| TTGGCGGGCGGCAGGAGTTG+CGG | 0.412471 | 6_2:-53400815 | Msa0920000:CDS |
| CAACGGATCCTCCGCGCTCC+GGG | 0.415376 | 6_2:-53400513 | Msa0920000:CDS |
| TAAGCGCTCTTGGGTGGGCT+GGG | 0.429950 | 6_2:+53399275 | None:intergenic |
| TTTATGGTCGGCGTGGCGAT+AGG | 0.434948 | 6_2:+53399338 | None:intergenic |
| AACTCCTGCCGCCCGCCAAG+CGG | 0.439941 | 6_2:+53400819 | None:intergenic |
| GCTCAGTCTTTGCAACGGCT+GGG | 0.440045 | 6_2:-53399382 | Msa0920000:CDS |
| GATCTTCCGGTCTGCGCGCG+TGG | 0.445805 | 6_2:+53400059 | None:intergenic |
| AGGCCTTCGCATTCCTAATC+CGG | 0.446913 | 6_2:-53399486 | Msa0920000:CDS |
| CAGCTTATGGCTAGAGCAAT+GGG | 0.447959 | 6_2:-53400887 | None:intergenic |
| CGACCATAAAATACGAGATT+GGG | 0.452501 | 6_2:-53399325 | Msa0920000:CDS |
| CATTAATGAACCATCATTGA+TGG | 0.457585 | 6_2:-53400281 | Msa0920000:CDS |
| GATCAATTCGACTCAAGGTC+TGG | 0.458049 | 6_2:-53400242 | Msa0920000:CDS |
| AGCTCAAATAAAGAAGAGTC+TGG | 0.460879 | 6_2:+53400086 | None:intergenic |
| CATATTACATAAGCGCTCTT+GGG | 0.461145 | 6_2:+53399266 | None:intergenic |
| CTTCATTTGATTCCGACGGC+CGG | 0.461330 | 6_2:+53400129 | None:intergenic |
| CCGGAAGATCTCAGTTGTCC+TGG | 0.472614 | 6_2:-53400046 | Msa0920000:CDS |
| CTCAGTCTTTGCAACGGCTG+GGG | 0.478154 | 6_2:-53399381 | Msa0920000:CDS |
| AGGAGTTGCGGGCAAGTGCT+TGG | 0.482455 | 6_2:-53400803 | Msa0920000:CDS |
| GTCTGGTCTGAATTCAGGCC+CGG | 0.488593 | 6_2:+53400103 | None:intergenic |
| GGGCGAGAATGTCGTTGCGC+GGG | 0.488700 | 6_2:+53399417 | None:intergenic |
| GCCCCTTCATTTGATTCCGA+CGG | 0.492309 | 6_2:+53400125 | None:intergenic |
| TTCTCAAAGATTTGATGGAA+TGG | 0.495647 | 6_2:-53399298 | Msa0920000:CDS |
| GATCTTATTCGTAGTTGGGA+GGG | 0.495807 | 6_2:-53400327 | Msa0920000:intron |
| TTCGCATTCCTAATCCGGTA+GGG | 0.500104 | 6_2:-53399481 | Msa0920000:CDS |
| CGGCCGTCGGAATCAAATGA+AGG | 0.500343 | 6_2:-53400128 | Msa0920000:CDS |
| CAAGAGCGCTTATGTAATAT+GGG | 0.501614 | 6_2:-53399264 | Msa0920000:CDS |
| CTGCTCCCACGCGCGCAGAC+CGG | 0.504541 | 6_2:-53400065 | Msa0920000:CDS |
| CCGACCATAAAATACGAGAT+TGG | 0.509360 | 6_2:-53399326 | Msa0920000:CDS |
| AGTCTTTGCAACGGCTGGGG+AGG | 0.513121 | 6_2:-53399378 | Msa0920000:CDS |
| TCTTATTCGTAGTTGGGAGG+GGG | 0.513444 | 6_2:-53400325 | Msa0920000:intron |
| TCGGAATCAAATGAAGGGGC+CGG | 0.516252 | 6_2:-53400122 | Msa0920000:CDS |
| ATCTTCCGGTCTGCGCGCGT+GGG | 0.517869 | 6_2:+53400060 | None:intergenic |
| CGGAATCAAATGAAGGGGCC+GGG | 0.520915 | 6_2:-53400121 | Msa0920000:CDS |
| GTAATATGGGAACTCATGGC+TGG | 0.521689 | 6_2:-53399251 | Msa0920000:CDS |
| GGCCGTCGGAATCAAATGAA+GGG | 0.522782 | 6_2:-53400127 | Msa0920000:CDS |
| TTCCATCAAATCTTTGAGAA+GGG | 0.523314 | 6_2:+53399301 | None:intergenic |
| ACAGCTTATGGCTAGAGCAA+TGG | 0.524590 | 6_2:-53400888 | None:intergenic |
| AGACTGAGCGAGAACGGTAA+GGG | 0.526507 | 6_2:+53399396 | None:intergenic |
| ATGGCTAGAGCAATGGGAGG+GGG | 0.529861 | 6_2:-53400881 | Msa0920000:CDS |
| TATGGCTAGAGCAATGGGAG+GGG | 0.529887 | 6_2:-53400882 | Msa0920000:CDS |
| GTTGCGGGCAAGTGCTTGGT+AGG | 0.531031 | 6_2:-53400799 | Msa0920000:CDS |
| ATTACATAAGCGCTCTTGGG+TGG | 0.534053 | 6_2:+53399269 | None:intergenic |
| TACCGGATATCAAAACCATA+AGG | 0.534728 | 6_2:+53399221 | None:intergenic |
| GGGATGCGATTAGCCAAGCT+AGG | 0.535773 | 6_2:+53399438 | None:intergenic |
| AGAGTGTCTGTTGTATCGGT+AGG | 0.538617 | 6_2:+53400536 | None:intergenic |
| GTTGAGAGTGTCTGTTGTAT+CGG | 0.539467 | 6_2:+53400532 | None:intergenic |
| CGATCTTATTCGTAGTTGGG+AGG | 0.540172 | 6_2:-53400328 | Msa0920000:intron |
| CCACGAGAAAGACGCACAGA+AGG | 0.541980 | 6_2:+53400480 | None:intergenic |
| AAGACTGAGCGAGAACGGTA+AGG | 0.542206 | 6_2:+53399395 | None:intergenic |
| ATTCCATCAAATCTTTGAGA+AGG | 0.544607 | 6_2:+53399300 | None:intergenic |
| ATGATATCTATGCCGGCCGT+CGG | 0.544608 | 6_2:-53400141 | Msa0920000:CDS |
| TCGCATTCCTAATCCGGTAG+GGG | 0.545017 | 6_2:-53399480 | Msa0920000:CDS |
| CTTCGCATTCCTAATCCGGT+AGG | 0.547950 | 6_2:-53399482 | Msa0920000:CDS |
| CTAGGGCAAACAAAGCCGTC+CGG | 0.548283 | 6_2:+53399456 | None:intergenic |
| CTTATTCGTAGTTGGGAGGG+GGG | 0.553228 | 6_2:-53400324 | Msa0920000:intron |
| GGGGAAGGAGTCTAAATCAA+TGG | 0.556939 | 6_2:-53400305 | Msa0920000:CDS |
| TGTGCAACGTCCATCAATGA+TGG | 0.565186 | 6_2:+53400271 | None:intergenic |
| TCCATCAAATCTTTGAGAAG+GGG | 0.566678 | 6_2:+53399302 | None:intergenic |
| ACAGAAGGAAGAGGTATGCC+CGG | 0.571672 | 6_2:+53400495 | None:intergenic |
| TTGCAAAGACTGAGCGAGAA+CGG | 0.572814 | 6_2:+53399390 | None:intergenic |
| TTATGTAATATGGGAACTCA+TGG | 0.573781 | 6_2:-53399255 | Msa0920000:CDS |
| TCTACGTACTTGTCAAGTCC+AGG | 0.574108 | 6_2:+53400028 | None:intergenic |
| TTACATAAGCGCTCTTGGGT+GGG | 0.574541 | 6_2:+53399270 | None:intergenic |
| GAAAGACGCACAGAAGGAAG+AGG | 0.578029 | 6_2:+53400486 | None:intergenic |
| GACACGATCAATTCGACTCA+AGG | 0.584802 | 6_2:-53400247 | Msa0920000:CDS |
| GAGTGTCTGTTGTATCGGTA+GGG | 0.597257 | 6_2:+53400537 | None:intergenic |
| GGCGAGAATGTCGTTGCGCG+GGG | 0.597805 | 6_2:+53399418 | None:intergenic |
| GGATGCGATTAGCCAAGCTA+GGG | 0.598400 | 6_2:+53399439 | None:intergenic |
| GGGTCTCATGATATCTATGC+CGG | 0.603272 | 6_2:-53400148 | Msa0920000:CDS |
| TTATGGCTAGAGCAATGGGA+GGG | 0.604810 | 6_2:-53400883 | Msa0920000:CDS |
| CCCCGGCATAGAGAACTGTA+AGG | 0.611801 | 6_2:-53400858 | Msa0920000:CDS |
| CGCATTCCTAATCCGGTAGG+GGG | 0.612148 | 6_2:-53399479 | Msa0920000:CDS |
| GGGGCGAGAATGTCGTTGCG+CGG | 0.612969 | 6_2:+53399416 | None:intergenic |
| GACTGAGCGAGAACGGTAAG+GGG | 0.616195 | 6_2:+53399397 | None:intergenic |
| CCTTACAGTTCTCTATGCCG+GGG | 0.621235 | 6_2:+53400858 | None:intergenic |
| TTCTCGCTCAGTCTTTGCAA+CGG | 0.627025 | 6_2:-53399387 | Msa0920000:CDS |
| GCCGTCGGAATCAAATGAAG+GGG | 0.628560 | 6_2:-53400126 | Msa0920000:CDS |
| GAAGAGGTATGCCCGGAGCG+CGG | 0.638294 | 6_2:+53400502 | None:intergenic |
| CTACCGGATTAGGAATGCGA+AGG | 0.645121 | 6_2:+53399483 | None:intergenic |
| GAGGTATGCCCGGAGCGCGG+AGG | 0.657303 | 6_2:+53400505 | None:intergenic |
| CTTATGGCTAGAGCAATGGG+AGG | 0.675758 | 6_2:-53400884 | Msa0920000:CDS |
| GATACAACAGACACTCTCAA+CGG | 0.713196 | 6_2:-53400530 | Msa0920000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTTTATTCAATAC+AGG | - | chr6_2:53399524-53399543 | Msa0920000:intron | 10.0% |
| !!! | TTATTTTTTTATTCAATACA+GGG | - | chr6_2:53399525-53399544 | Msa0920000:intron | 10.0% |
| !!! | ATTATTTTTTTATTCAATAC+AGG | - | chr6_2:53399524-53399543 | Msa0920000:intron | 10.0% |
| !!! | TTATTTTTTTATTCAATACA+GGG | - | chr6_2:53399525-53399544 | Msa0920000:intron | 10.0% |
| !!! | AGCTTTATTTAAGAGATAAT+GGG | - | chr6_2:53399698-53399717 | Msa0920000:intron | 20.0% |
| !!! | AGCTTTATTTAAGAGATAAT+GGG | - | chr6_2:53399698-53399717 | Msa0920000:intron | 20.0% |
| ! | AATATTGGATCAAACAATAG+AGG | - | chr6_2:53399481-53399500 | Msa0920000:CDS | 25.0% |
| ! | ATATTGGATCAAACAATAGA+GGG | - | chr6_2:53399482-53399501 | Msa0920000:CDS | 25.0% |
| !!! | GAGCTTTATTTAAGAGATAA+TGG | - | chr6_2:53399697-53399716 | Msa0920000:intron | 25.0% |
| !!! | GCTTTATTTAAGAGATAATG+GGG | - | chr6_2:53399699-53399718 | Msa0920000:intron | 25.0% |
| ! | AAAAAAACCAAGAACGAAAA+CGG | + | chr6_2:53399742-53399761 | None:intergenic | 25.0% |
| !!! | TTTTCGTTCTTGGTTTTTTT+GGG | - | chr6_2:53399742-53399761 | Msa0920000:intron | 25.0% |
| !!! | TTTTTTTAGGTCGTGTAATA+GGG | - | chr6_2:53400382-53400401 | Msa0920000:intron | 25.0% |
| !!! | CTTTTTTAGCATTTTGTTTG+AGG | + | chr6_2:53400512-53400531 | None:intergenic | 25.0% |
| ! | CTCAAACAAAATGCTAAAAA+AGG | - | chr6_2:53400510-53400529 | Msa0920000:CDS | 25.0% |
| ! | ACAAAATGCTAAAAAAGGAT+AGG | - | chr6_2:53400515-53400534 | Msa0920000:CDS | 25.0% |
| ! | AATATTGGATCAAACAATAG+AGG | - | chr6_2:53399481-53399500 | Msa0920000:CDS | 25.0% |
| ! | ATATTGGATCAAACAATAGA+GGG | - | chr6_2:53399482-53399501 | Msa0920000:CDS | 25.0% |
| !!! | GAGCTTTATTTAAGAGATAA+TGG | - | chr6_2:53399697-53399716 | Msa0920000:intron | 25.0% |
| !!! | GCTTTATTTAAGAGATAATG+GGG | - | chr6_2:53399699-53399718 | Msa0920000:intron | 25.0% |
| ! | AAAAAAACCAAGAACGAAAA+CGG | + | chr6_2:53399742-53399761 | None:intergenic | 25.0% |
| !!! | TTTTCGTTCTTGGTTTTTTT+GGG | - | chr6_2:53399742-53399761 | Msa0920000:intron | 25.0% |
| !!! | TTTTTTTAGGTCGTGTAATA+GGG | - | chr6_2:53400382-53400401 | Msa0920000:intron | 25.0% |
| !!! | CTTTTTTAGCATTTTGTTTG+AGG | + | chr6_2:53400512-53400531 | None:intergenic | 25.0% |
| ! | CTCAAACAAAATGCTAAAAA+AGG | - | chr6_2:53400510-53400529 | Msa0920000:CDS | 25.0% |
| ! | ACAAAATGCTAAAAAAGGAT+AGG | - | chr6_2:53400515-53400534 | Msa0920000:CDS | 25.0% |
| TTGTTTGATCCAATATTGAC+CGG | + | chr6_2:53399478-53399497 | None:intergenic | 30.0% | |
| TAATAAATAGGTCAGTGCTA+CGG | + | chr6_2:53399508-53399527 | None:intergenic | 30.0% | |
| !! | GTTTTCGTTCTTGGTTTTTT+TGG | - | chr6_2:53399741-53399760 | Msa0920000:intron | 30.0% |
| !!! | TTTCGTTCTTGGTTTTTTTG+GGG | - | chr6_2:53399743-53399762 | Msa0920000:intron | 30.0% |
| CATTAATGAACCATCATTGA+TGG | - | chr6_2:53399820-53399839 | Msa0920000:intron | 30.0% | |
| !!! | GCTTTTTTCGTAGTAATAGT+GGG | - | chr6_2:53399929-53399948 | Msa0920000:intron | 30.0% |
| TCTTTCCATTGATAGATAAG+AGG | - | chr6_2:53400163-53400182 | Msa0920000:intron | 30.0% | |
| CTTTCCATTGATAGATAAGA+GGG | - | chr6_2:53400164-53400183 | Msa0920000:intron | 30.0% | |
| ! | ACCTTTAAGAGTATGTTCAA+GGG | + | chr6_2:53400196-53400215 | None:intergenic | 30.0% |
| ! | AACCTTTAAGAGTATGTTCA+AGG | + | chr6_2:53400197-53400216 | None:intergenic | 30.0% |
| TGAACATACTCTTAAAGGTT+AGG | - | chr6_2:53400197-53400216 | Msa0920000:intron | 30.0% | |
| AAAGGCTTAGATTTCTTCTA+AGG | - | chr6_2:53400341-53400360 | Msa0920000:intron | 30.0% | |
| AAGGCTTAGATTTCTTCTAA+GGG | - | chr6_2:53400342-53400361 | Msa0920000:intron | 30.0% | |
| CTATTACACGACCTAAAAAA+AGG | + | chr6_2:53400383-53400402 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTAGGTCGTGTAAT+AGG | - | chr6_2:53400381-53400400 | Msa0920000:intron | 30.0% |
| AGAATGAAATGCAGAAATAC+GGG | + | chr6_2:53400477-53400496 | None:intergenic | 30.0% | |
| GAGAATGAAATGCAGAAATA+CGG | + | chr6_2:53400478-53400497 | None:intergenic | 30.0% | |
| TCTGCATTTCATTCTCTATT+CGG | - | chr6_2:53400482-53400501 | Msa0920000:intron | 30.0% | |
| !! | TTTTAGCATTTTGTTTGAGG+CGG | + | chr6_2:53400509-53400528 | None:intergenic | 30.0% |
| ! | TTCCATCAAATCTTTGAGAA+GGG | + | chr6_2:53400803-53400822 | None:intergenic | 30.0% |
| ! | ATTCCATCAAATCTTTGAGA+AGG | + | chr6_2:53400804-53400823 | None:intergenic | 30.0% |
| TTCTCAAAGATTTGATGGAA+TGG | - | chr6_2:53400803-53400822 | Msa0920000:CDS | 30.0% | |
| TTATGTAATATGGGAACTCA+TGG | - | chr6_2:53400846-53400865 | Msa0920000:CDS | 30.0% | |
| !!! | ATCCTTATGGTTTTGATATC+CGG | - | chr6_2:53400878-53400897 | Msa0920000:CDS | 30.0% |
| TTGTTTGATCCAATATTGAC+CGG | + | chr6_2:53399478-53399497 | None:intergenic | 30.0% | |
| TAATAAATAGGTCAGTGCTA+CGG | + | chr6_2:53399508-53399527 | None:intergenic | 30.0% | |
| !! | GTTTTCGTTCTTGGTTTTTT+TGG | - | chr6_2:53399741-53399760 | Msa0920000:intron | 30.0% |
| !!! | TTTCGTTCTTGGTTTTTTTG+GGG | - | chr6_2:53399743-53399762 | Msa0920000:intron | 30.0% |
| CATTAATGAACCATCATTGA+TGG | - | chr6_2:53399820-53399839 | Msa0920000:intron | 30.0% | |
| !!! | GCTTTTTTCGTAGTAATAGT+GGG | - | chr6_2:53399929-53399948 | Msa0920000:intron | 30.0% |
| TCTTTCCATTGATAGATAAG+AGG | - | chr6_2:53400163-53400182 | Msa0920000:intron | 30.0% | |
| CTTTCCATTGATAGATAAGA+GGG | - | chr6_2:53400164-53400183 | Msa0920000:intron | 30.0% | |
| ! | ACCTTTAAGAGTATGTTCAA+GGG | + | chr6_2:53400196-53400215 | None:intergenic | 30.0% |
| ! | AACCTTTAAGAGTATGTTCA+AGG | + | chr6_2:53400197-53400216 | None:intergenic | 30.0% |
| TGAACATACTCTTAAAGGTT+AGG | - | chr6_2:53400197-53400216 | Msa0920000:intron | 30.0% | |
| AAAGGCTTAGATTTCTTCTA+AGG | - | chr6_2:53400341-53400360 | Msa0920000:intron | 30.0% | |
| AAGGCTTAGATTTCTTCTAA+GGG | - | chr6_2:53400342-53400361 | Msa0920000:intron | 30.0% | |
| CTATTACACGACCTAAAAAA+AGG | + | chr6_2:53400383-53400402 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTAGGTCGTGTAAT+AGG | - | chr6_2:53400381-53400400 | Msa0920000:intron | 30.0% |
| AGAATGAAATGCAGAAATAC+GGG | + | chr6_2:53400477-53400496 | None:intergenic | 30.0% | |
| GAGAATGAAATGCAGAAATA+CGG | + | chr6_2:53400478-53400497 | None:intergenic | 30.0% | |
| TCTGCATTTCATTCTCTATT+CGG | - | chr6_2:53400482-53400501 | Msa0920000:intron | 30.0% | |
| !! | TTTTAGCATTTTGTTTGAGG+CGG | + | chr6_2:53400509-53400528 | None:intergenic | 30.0% |
| ! | TTCCATCAAATCTTTGAGAA+GGG | + | chr6_2:53400803-53400822 | None:intergenic | 30.0% |
| ! | ATTCCATCAAATCTTTGAGA+AGG | + | chr6_2:53400804-53400823 | None:intergenic | 30.0% |
| TTCTCAAAGATTTGATGGAA+TGG | - | chr6_2:53400803-53400822 | Msa0920000:CDS | 30.0% | |
| TTATGTAATATGGGAACTCA+TGG | - | chr6_2:53400846-53400865 | Msa0920000:CDS | 30.0% | |
| !!! | ATCCTTATGGTTTTGATATC+CGG | - | chr6_2:53400878-53400897 | Msa0920000:CDS | 30.0% |
| !! | ATTAAAAGCAAGGAGCACTA+CGG | - | chr6_2:53399408-53399427 | Msa0920000:CDS | 35.0% |
| TGTTTGATCCAATATTGACC+GGG | + | chr6_2:53399477-53399496 | None:intergenic | 35.0% | |
| TCTCGATCTTATTCGTAGTT+GGG | - | chr6_2:53399770-53399789 | Msa0920000:intron | 35.0% | |
| TCTCCTAGTTAGAAGGAAAA+AGG | - | chr6_2:53399902-53399921 | Msa0920000:intron | 35.0% | |
| TAGTTAGAAGGAAAAAGGCA+GGG | - | chr6_2:53399907-53399926 | Msa0920000:intron | 35.0% | |
| !!! | GGCTTTTTTCGTAGTAATAG+TGG | - | chr6_2:53399928-53399947 | Msa0920000:intron | 35.0% |
| !! | TTTTTCGTAGTAATAGTGGG+CGG | - | chr6_2:53399932-53399951 | Msa0920000:intron | 35.0% |
| AGCTCAAATAAAGAAGAGTC+TGG | + | chr6_2:53400018-53400037 | None:intergenic | 35.0% | |
| ! | AGTCTCAATCGATCTTTTCT+AGG | - | chr6_2:53400119-53400138 | Msa0920000:CDS | 35.0% |
| ! | TTTAAGAGTATGTTCAAGGG+GGG | + | chr6_2:53400193-53400212 | None:intergenic | 35.0% |
| ! | CTTTAAGAGTATGTTCAAGG+GGG | + | chr6_2:53400194-53400213 | None:intergenic | 35.0% |
| ! | CCTTTAAGAGTATGTTCAAG+GGG | + | chr6_2:53400195-53400214 | None:intergenic | 35.0% |
| TTTCTATCTATATGACCTCC+GGG | + | chr6_2:53400262-53400281 | None:intergenic | 35.0% | |
| GTTTCTATCTATATGACCTC+CGG | + | chr6_2:53400263-53400282 | None:intergenic | 35.0% | |
| AGGTCATATAGATAGAAACC+CGG | - | chr6_2:53400264-53400283 | Msa0920000:CDS | 35.0% | |
| !!! | ACAGCAAGCTACCTTTTTTT+AGG | - | chr6_2:53400369-53400388 | Msa0920000:intron | 35.0% |
| !! | TTTAGCATTTTGTTTGAGGC+GGG | + | chr6_2:53400508-53400527 | None:intergenic | 35.0% |
| TGATTCGAAGTCACTATGAA+AGG | - | chr6_2:53400543-53400562 | Msa0920000:CDS | 35.0% | |
| GATTCGAAGTCACTATGAAA+GGG | - | chr6_2:53400544-53400563 | Msa0920000:CDS | 35.0% | |
| ! | CCAATCTCGTATTTTATGGT+CGG | + | chr6_2:53400778-53400797 | None:intergenic | 35.0% |
| CGACCATAAAATACGAGATT+GGG | - | chr6_2:53400776-53400795 | Msa0920000:intron | 35.0% | |
| ! | TCCATCAAATCTTTGAGAAG+GGG | + | chr6_2:53400802-53400821 | None:intergenic | 35.0% |
| CATATTACATAAGCGCTCTT+GGG | + | chr6_2:53400838-53400857 | None:intergenic | 35.0% | |
| !! | CAAGAGCGCTTATGTAATAT+GGG | - | chr6_2:53400837-53400856 | Msa0920000:CDS | 35.0% |
| TACCGGATATCAAAACCATA+AGG | + | chr6_2:53400883-53400902 | None:intergenic | 35.0% | |
| !! | ATTAAAAGCAAGGAGCACTA+CGG | - | chr6_2:53399408-53399427 | Msa0920000:CDS | 35.0% |
| TGTTTGATCCAATATTGACC+GGG | + | chr6_2:53399477-53399496 | None:intergenic | 35.0% | |
| TCTCGATCTTATTCGTAGTT+GGG | - | chr6_2:53399770-53399789 | Msa0920000:intron | 35.0% | |
| TCTCCTAGTTAGAAGGAAAA+AGG | - | chr6_2:53399902-53399921 | Msa0920000:intron | 35.0% | |
| TAGTTAGAAGGAAAAAGGCA+GGG | - | chr6_2:53399907-53399926 | Msa0920000:intron | 35.0% | |
| !!! | GGCTTTTTTCGTAGTAATAG+TGG | - | chr6_2:53399928-53399947 | Msa0920000:intron | 35.0% |
| !! | TTTTTCGTAGTAATAGTGGG+CGG | - | chr6_2:53399932-53399951 | Msa0920000:intron | 35.0% |
| AGCTCAAATAAAGAAGAGTC+TGG | + | chr6_2:53400018-53400037 | None:intergenic | 35.0% | |
| ! | AGTCTCAATCGATCTTTTCT+AGG | - | chr6_2:53400119-53400138 | Msa0920000:CDS | 35.0% |
| ! | TTTAAGAGTATGTTCAAGGG+GGG | + | chr6_2:53400193-53400212 | None:intergenic | 35.0% |
| ! | CTTTAAGAGTATGTTCAAGG+GGG | + | chr6_2:53400194-53400213 | None:intergenic | 35.0% |
| ! | CCTTTAAGAGTATGTTCAAG+GGG | + | chr6_2:53400195-53400214 | None:intergenic | 35.0% |
| TTTCTATCTATATGACCTCC+GGG | + | chr6_2:53400262-53400281 | None:intergenic | 35.0% | |
| GTTTCTATCTATATGACCTC+CGG | + | chr6_2:53400263-53400282 | None:intergenic | 35.0% | |
| AGGTCATATAGATAGAAACC+CGG | - | chr6_2:53400264-53400283 | Msa0920000:CDS | 35.0% | |
| !!! | ACAGCAAGCTACCTTTTTTT+AGG | - | chr6_2:53400369-53400388 | Msa0920000:intron | 35.0% |
| !! | TTTAGCATTTTGTTTGAGGC+GGG | + | chr6_2:53400508-53400527 | None:intergenic | 35.0% |
| TGATTCGAAGTCACTATGAA+AGG | - | chr6_2:53400543-53400562 | Msa0920000:CDS | 35.0% | |
| GATTCGAAGTCACTATGAAA+GGG | - | chr6_2:53400544-53400563 | Msa0920000:CDS | 35.0% | |
| ! | CCAATCTCGTATTTTATGGT+CGG | + | chr6_2:53400778-53400797 | None:intergenic | 35.0% |
| CGACCATAAAATACGAGATT+GGG | - | chr6_2:53400776-53400795 | Msa0920000:intron | 35.0% | |
| ! | TCCATCAAATCTTTGAGAAG+GGG | + | chr6_2:53400802-53400821 | None:intergenic | 35.0% |
| CATATTACATAAGCGCTCTT+GGG | + | chr6_2:53400838-53400857 | None:intergenic | 35.0% | |
| !! | CAAGAGCGCTTATGTAATAT+GGG | - | chr6_2:53400837-53400856 | Msa0920000:CDS | 35.0% |
| TACCGGATATCAAAACCATA+AGG | + | chr6_2:53400883-53400902 | None:intergenic | 35.0% | |
| ATCCTTACAGTTCTCTATGC+CGG | + | chr6_2:53399248-53399267 | None:intergenic | 40.0% | |
| AGTACGATAAATTAGCCCTG+CGG | - | chr6_2:53399379-53399398 | Msa0920000:CDS | 40.0% | |
| ! | GCTTTTAATAAAGCTCCGCA+GGG | + | chr6_2:53399397-53399416 | None:intergenic | 40.0% |
| ! | TGCTTTTAATAAAGCTCCGC+AGG | + | chr6_2:53399398-53399417 | None:intergenic | 40.0% |
| !! | GCGGAGCTTTATTAAAAGCA+AGG | - | chr6_2:53399398-53399417 | Msa0920000:CDS | 40.0% |
| !! | TTAAAAGCAAGGAGCACTAC+GGG | - | chr6_2:53399409-53399428 | Msa0920000:CDS | 40.0% |
| GTTTGATCCAATATTGACCG+GGG | + | chr6_2:53399476-53399495 | None:intergenic | 40.0% | |
| !! | GTTGAGAGTGTCTGTTGTAT+CGG | + | chr6_2:53399572-53399591 | None:intergenic | 40.0% |
| GATACAACAGACACTCTCAA+CGG | - | chr6_2:53399571-53399590 | Msa0920000:intron | 40.0% | |
| ! | ATAATGGGGAGTGAATCGAA+AGG | - | chr6_2:53399713-53399732 | Msa0920000:intron | 40.0% |
| CAACTACGAATAAGATCGAG+AGG | + | chr6_2:53399771-53399790 | None:intergenic | 40.0% | |
| CTCTCGATCTTATTCGTAGT+TGG | - | chr6_2:53399769-53399788 | Msa0920000:intron | 40.0% | |
| GATCTTATTCGTAGTTGGGA+GGG | - | chr6_2:53399774-53399793 | Msa0920000:intron | 40.0% | |
| ATCTTATTCGTAGTTGGGAG+GGG | - | chr6_2:53399775-53399794 | Msa0920000:intron | 40.0% | |
| TGCTTACTCTCCTAGTTAGA+AGG | - | chr6_2:53399895-53399914 | Msa0920000:intron | 40.0% | |
| ! | CTGCCTTTTTCCTTCTAACT+AGG | + | chr6_2:53399908-53399927 | None:intergenic | 40.0% |
| CTAGTTAGAAGGAAAAAGGC+AGG | - | chr6_2:53399906-53399925 | Msa0920000:intron | 40.0% | |
| !!! | TTTTCGTAGTAATAGTGGGC+GGG | - | chr6_2:53399933-53399952 | Msa0920000:intron | 40.0% |
| AAGTACGTAGAGATCTTCGT+GGG | - | chr6_2:53400085-53400104 | Msa0920000:CDS | 40.0% | |
| ! | TTAAGAGTATGTTCAAGGGG+GGG | + | chr6_2:53400192-53400211 | None:intergenic | 40.0% |
| CCCCTTGAACATACTCTTAA+AGG | - | chr6_2:53400192-53400211 | Msa0920000:intron | 40.0% | |
| AAAGTAAACCTCTTCCGTAG+AGG | + | chr6_2:53400233-53400252 | None:intergenic | 40.0% | |
| !! | TTTTAGGTCGTGTAATAGGG+AGG | - | chr6_2:53400385-53400404 | Msa0920000:intron | 40.0% |
| CTCGAAAGCCTTTAGTACTT+CGG | - | chr6_2:53400415-53400434 | Msa0920000:intron | 40.0% | |
| AAAGCCTTTAGTACTTCGGT+AGG | - | chr6_2:53400419-53400438 | Msa0920000:intron | 40.0% | |
| AAGCCTTTAGTACTTCGGTA+GGG | - | chr6_2:53400420-53400439 | Msa0920000:intron | 40.0% | |
| ! | AGAGTTCCAAACCGGTTTAA+GGG | + | chr6_2:53400453-53400472 | None:intergenic | 40.0% |
| ! | AAGAGTTCCAAACCGGTTTA+AGG | + | chr6_2:53400454-53400473 | None:intergenic | 40.0% |
| ! | AGCATAGCTCTTTATTTCCC+CGG | - | chr6_2:53400576-53400595 | Msa0920000:intron | 40.0% |
| CCGACCATAAAATACGAGAT+TGG | - | chr6_2:53400775-53400794 | Msa0920000:intron | 40.0% | |
| CCATATTACATAAGCGCTCT+TGG | + | chr6_2:53400839-53400858 | None:intergenic | 40.0% | |
| !! | CCAAGAGCGCTTATGTAATA+TGG | - | chr6_2:53400836-53400855 | Msa0920000:CDS | 40.0% |
| ATGGCTGGAAACAATCCTTA+TGG | - | chr6_2:53400865-53400884 | Msa0920000:CDS | 40.0% | |
| ATCCTTACAGTTCTCTATGC+CGG | + | chr6_2:53399248-53399267 | None:intergenic | 40.0% | |
| AGTACGATAAATTAGCCCTG+CGG | - | chr6_2:53399379-53399398 | Msa0920000:CDS | 40.0% | |
| ! | GCTTTTAATAAAGCTCCGCA+GGG | + | chr6_2:53399397-53399416 | None:intergenic | 40.0% |
| ! | TGCTTTTAATAAAGCTCCGC+AGG | + | chr6_2:53399398-53399417 | None:intergenic | 40.0% |
| !! | GCGGAGCTTTATTAAAAGCA+AGG | - | chr6_2:53399398-53399417 | Msa0920000:CDS | 40.0% |
| !! | TTAAAAGCAAGGAGCACTAC+GGG | - | chr6_2:53399409-53399428 | Msa0920000:CDS | 40.0% |
| GTTTGATCCAATATTGACCG+GGG | + | chr6_2:53399476-53399495 | None:intergenic | 40.0% | |
| !! | GTTGAGAGTGTCTGTTGTAT+CGG | + | chr6_2:53399572-53399591 | None:intergenic | 40.0% |
| GATACAACAGACACTCTCAA+CGG | - | chr6_2:53399571-53399590 | Msa0920000:intron | 40.0% | |
| ! | ATAATGGGGAGTGAATCGAA+AGG | - | chr6_2:53399713-53399732 | Msa0920000:intron | 40.0% |
| CAACTACGAATAAGATCGAG+AGG | + | chr6_2:53399771-53399790 | None:intergenic | 40.0% | |
| CTCTCGATCTTATTCGTAGT+TGG | - | chr6_2:53399769-53399788 | Msa0920000:intron | 40.0% | |
| GATCTTATTCGTAGTTGGGA+GGG | - | chr6_2:53399774-53399793 | Msa0920000:intron | 40.0% | |
| ATCTTATTCGTAGTTGGGAG+GGG | - | chr6_2:53399775-53399794 | Msa0920000:intron | 40.0% | |
| TGCTTACTCTCCTAGTTAGA+AGG | - | chr6_2:53399895-53399914 | Msa0920000:intron | 40.0% | |
| ! | CTGCCTTTTTCCTTCTAACT+AGG | + | chr6_2:53399908-53399927 | None:intergenic | 40.0% |
| CTAGTTAGAAGGAAAAAGGC+AGG | - | chr6_2:53399906-53399925 | Msa0920000:intron | 40.0% | |
| !!! | TTTTCGTAGTAATAGTGGGC+GGG | - | chr6_2:53399933-53399952 | Msa0920000:intron | 40.0% |
| AAGTACGTAGAGATCTTCGT+GGG | - | chr6_2:53400085-53400104 | Msa0920000:CDS | 40.0% | |
| ! | TTAAGAGTATGTTCAAGGGG+GGG | + | chr6_2:53400192-53400211 | None:intergenic | 40.0% |
| CCCCTTGAACATACTCTTAA+AGG | - | chr6_2:53400192-53400211 | Msa0920000:intron | 40.0% | |
| AAAGTAAACCTCTTCCGTAG+AGG | + | chr6_2:53400233-53400252 | None:intergenic | 40.0% | |
| !! | TTTTAGGTCGTGTAATAGGG+AGG | - | chr6_2:53400385-53400404 | Msa0920000:intron | 40.0% |
| CTCGAAAGCCTTTAGTACTT+CGG | - | chr6_2:53400415-53400434 | Msa0920000:intron | 40.0% | |
| AAAGCCTTTAGTACTTCGGT+AGG | - | chr6_2:53400419-53400438 | Msa0920000:intron | 40.0% | |
| AAGCCTTTAGTACTTCGGTA+GGG | - | chr6_2:53400420-53400439 | Msa0920000:intron | 40.0% | |
| ! | AGAGTTCCAAACCGGTTTAA+GGG | + | chr6_2:53400453-53400472 | None:intergenic | 40.0% |
| ! | AAGAGTTCCAAACCGGTTTA+AGG | + | chr6_2:53400454-53400473 | None:intergenic | 40.0% |
| ! | AGCATAGCTCTTTATTTCCC+CGG | - | chr6_2:53400576-53400595 | Msa0920000:intron | 40.0% |
| CCGACCATAAAATACGAGAT+TGG | - | chr6_2:53400775-53400794 | Msa0920000:intron | 40.0% | |
| CCATATTACATAAGCGCTCT+TGG | + | chr6_2:53400839-53400858 | None:intergenic | 40.0% | |
| !! | CCAAGAGCGCTTATGTAATA+TGG | - | chr6_2:53400836-53400855 | Msa0920000:CDS | 40.0% |
| ATGGCTGGAAACAATCCTTA+TGG | - | chr6_2:53400865-53400884 | Msa0920000:CDS | 40.0% | |
| TCCTTACAGTTCTCTATGCC+GGG | + | chr6_2:53399247-53399266 | None:intergenic | 45.0% | |
| CAAACCAAGGAAAGGCCTTA+TGG | - | chr6_2:53399436-53399455 | Msa0920000:CDS | 45.0% | |
| ACTTCCATAAGGCCTTTCCT+TGG | + | chr6_2:53399443-53399462 | None:intergenic | 45.0% | |
| ! | AGGAAAGGCCTTATGGAAGT+CGG | - | chr6_2:53399443-53399462 | Msa0920000:CDS | 45.0% |
| ! | GAGTGTCTGTTGTATCGGTA+GGG | + | chr6_2:53399567-53399586 | None:intergenic | 45.0% |
| ! | AGAGTGTCTGTTGTATCGGT+AGG | + | chr6_2:53399568-53399587 | None:intergenic | 45.0% |
| ! | AAGGCTTCCGTTTTCGTTCT+TGG | - | chr6_2:53399732-53399751 | Msa0920000:intron | 45.0% |
| CGATCTTATTCGTAGTTGGG+AGG | - | chr6_2:53399773-53399792 | Msa0920000:intron | 45.0% | |
| TCTTATTCGTAGTTGGGAGG+GGG | - | chr6_2:53399776-53399795 | Msa0920000:intron | 45.0% | |
| GGGGAAGGAGTCTAAATCAA+TGG | - | chr6_2:53399796-53399815 | Msa0920000:intron | 45.0% | |
| TGTGCAACGTCCATCAATGA+TGG | + | chr6_2:53399833-53399852 | None:intergenic | 45.0% | |
| GACACGATCAATTCGACTCA+AGG | - | chr6_2:53399854-53399873 | Msa0920000:intron | 45.0% | |
| GATCAATTCGACTCAAGGTC+TGG | - | chr6_2:53399859-53399878 | Msa0920000:intron | 45.0% | |
| GGGTCTCATGATATCTATGC+CGG | - | chr6_2:53399953-53399972 | Msa0920000:intron | 45.0% | |
| GAAGAGTCTGGTCTGAATTC+AGG | + | chr6_2:53400006-53400025 | None:intergenic | 45.0% | |
| TCTACGTACTTGTCAAGTCC+AGG | + | chr6_2:53400076-53400095 | None:intergenic | 45.0% | |
| CAAGTACGTAGAGATCTTCG+TGG | - | chr6_2:53400084-53400103 | Msa0920000:CDS | 45.0% | |
| CTAGGATTCCTTATCACGCA+CGG | - | chr6_2:53400137-53400156 | Msa0920000:CDS | 45.0% | |
| AAAGATCTCCGTGCGTGATA+AGG | + | chr6_2:53400148-53400167 | None:intergenic | 45.0% | |
| GGAGCCCTCTTATCTATCAA+TGG | + | chr6_2:53400171-53400190 | None:intergenic | 45.0% | |
| TAGGTTACTACCTGCCTCTA+CGG | - | chr6_2:53400216-53400235 | Msa0920000:CDS | 45.0% | |
| AGCGATAAGAACGAAAGGGT+TGG | - | chr6_2:53400287-53400306 | Msa0920000:CDS | 45.0% | |
| !! | TAAGAACGAAAGGGTTGGTG+TGG | - | chr6_2:53400292-53400311 | Msa0920000:CDS | 45.0% |
| ACAACTACTGGCGCTTCAAA+AGG | - | chr6_2:53400323-53400342 | Msa0920000:intron | 45.0% | |
| ! | CGAAGTACTAAAGGCTTTCG+AGG | + | chr6_2:53400417-53400436 | None:intergenic | 45.0% |
| ATACGGGAAGAGTTCCAAAC+CGG | + | chr6_2:53400461-53400480 | None:intergenic | 45.0% | |
| CGAAGTCACTATGAAAGGGT+CGG | - | chr6_2:53400548-53400567 | Msa0920000:CDS | 45.0% | |
| TTCGCATTCCTAATCCGGTA+GGG | - | chr6_2:53400620-53400639 | Msa0920000:intron | 45.0% | |
| TTGCAAAGACTGAGCGAGAA+CGG | + | chr6_2:53400714-53400733 | None:intergenic | 45.0% | |
| TTCTCGCTCAGTCTTTGCAA+CGG | - | chr6_2:53400714-53400733 | Msa0920000:intron | 45.0% | |
| ! | GGGCCCAATCTCGTATTTTA+TGG | + | chr6_2:53400782-53400801 | None:intergenic | 45.0% |
| GCCCCTTCTCAAAGATTTGA+TGG | - | chr6_2:53400798-53400817 | Msa0920000:CDS | 45.0% | |
| TTACATAAGCGCTCTTGGGT+GGG | + | chr6_2:53400834-53400853 | None:intergenic | 45.0% | |
| ATTACATAAGCGCTCTTGGG+TGG | + | chr6_2:53400835-53400854 | None:intergenic | 45.0% | |
| GTAATATGGGAACTCATGGC+TGG | - | chr6_2:53400850-53400869 | Msa0920000:CDS | 45.0% | |
| TCCTTACAGTTCTCTATGCC+GGG | + | chr6_2:53399247-53399266 | None:intergenic | 45.0% | |
| CAAACCAAGGAAAGGCCTTA+TGG | - | chr6_2:53399436-53399455 | Msa0920000:CDS | 45.0% | |
| ACTTCCATAAGGCCTTTCCT+TGG | + | chr6_2:53399443-53399462 | None:intergenic | 45.0% | |
| ! | AGGAAAGGCCTTATGGAAGT+CGG | - | chr6_2:53399443-53399462 | Msa0920000:CDS | 45.0% |
| ! | GAGTGTCTGTTGTATCGGTA+GGG | + | chr6_2:53399567-53399586 | None:intergenic | 45.0% |
| ! | AGAGTGTCTGTTGTATCGGT+AGG | + | chr6_2:53399568-53399587 | None:intergenic | 45.0% |
| ! | AAGGCTTCCGTTTTCGTTCT+TGG | - | chr6_2:53399732-53399751 | Msa0920000:intron | 45.0% |
| CGATCTTATTCGTAGTTGGG+AGG | - | chr6_2:53399773-53399792 | Msa0920000:intron | 45.0% | |
| TCTTATTCGTAGTTGGGAGG+GGG | - | chr6_2:53399776-53399795 | Msa0920000:intron | 45.0% | |
| GGGGAAGGAGTCTAAATCAA+TGG | - | chr6_2:53399796-53399815 | Msa0920000:intron | 45.0% | |
| TGTGCAACGTCCATCAATGA+TGG | + | chr6_2:53399833-53399852 | None:intergenic | 45.0% | |
| GACACGATCAATTCGACTCA+AGG | - | chr6_2:53399854-53399873 | Msa0920000:intron | 45.0% | |
| GATCAATTCGACTCAAGGTC+TGG | - | chr6_2:53399859-53399878 | Msa0920000:intron | 45.0% | |
| GGGTCTCATGATATCTATGC+CGG | - | chr6_2:53399953-53399972 | Msa0920000:intron | 45.0% | |
| GAAGAGTCTGGTCTGAATTC+AGG | + | chr6_2:53400006-53400025 | None:intergenic | 45.0% | |
| TCTACGTACTTGTCAAGTCC+AGG | + | chr6_2:53400076-53400095 | None:intergenic | 45.0% | |
| CAAGTACGTAGAGATCTTCG+TGG | - | chr6_2:53400084-53400103 | Msa0920000:CDS | 45.0% | |
| CTAGGATTCCTTATCACGCA+CGG | - | chr6_2:53400137-53400156 | Msa0920000:CDS | 45.0% | |
| AAAGATCTCCGTGCGTGATA+AGG | + | chr6_2:53400148-53400167 | None:intergenic | 45.0% | |
| GGAGCCCTCTTATCTATCAA+TGG | + | chr6_2:53400171-53400190 | None:intergenic | 45.0% | |
| TAGGTTACTACCTGCCTCTA+CGG | - | chr6_2:53400216-53400235 | Msa0920000:CDS | 45.0% | |
| AGCGATAAGAACGAAAGGGT+TGG | - | chr6_2:53400287-53400306 | Msa0920000:CDS | 45.0% | |
| !! | TAAGAACGAAAGGGTTGGTG+TGG | - | chr6_2:53400292-53400311 | Msa0920000:CDS | 45.0% |
| ACAACTACTGGCGCTTCAAA+AGG | - | chr6_2:53400323-53400342 | Msa0920000:intron | 45.0% | |
| ! | CGAAGTACTAAAGGCTTTCG+AGG | + | chr6_2:53400417-53400436 | None:intergenic | 45.0% |
| ATACGGGAAGAGTTCCAAAC+CGG | + | chr6_2:53400461-53400480 | None:intergenic | 45.0% | |
| CGAAGTCACTATGAAAGGGT+CGG | - | chr6_2:53400548-53400567 | Msa0920000:CDS | 45.0% | |
| TTCGCATTCCTAATCCGGTA+GGG | - | chr6_2:53400620-53400639 | Msa0920000:intron | 45.0% | |
| TTGCAAAGACTGAGCGAGAA+CGG | + | chr6_2:53400714-53400733 | None:intergenic | 45.0% | |
| TTCTCGCTCAGTCTTTGCAA+CGG | - | chr6_2:53400714-53400733 | Msa0920000:intron | 45.0% | |
| ! | GGGCCCAATCTCGTATTTTA+TGG | + | chr6_2:53400782-53400801 | None:intergenic | 45.0% |
| GCCCCTTCTCAAAGATTTGA+TGG | - | chr6_2:53400798-53400817 | Msa0920000:CDS | 45.0% | |
| TTACATAAGCGCTCTTGGGT+GGG | + | chr6_2:53400834-53400853 | None:intergenic | 45.0% | |
| ATTACATAAGCGCTCTTGGG+TGG | + | chr6_2:53400835-53400854 | None:intergenic | 45.0% | |
| GTAATATGGGAACTCATGGC+TGG | - | chr6_2:53400850-53400869 | Msa0920000:CDS | 45.0% | |
| !! | TGAATAAAAAAATAATAAAT+AGG | + | chr6_2:53399520-53399539 | None:intergenic | 5.0% |
| !! | TGAATAAAAAAATAATAAAT+AGG | + | chr6_2:53399520-53399539 | None:intergenic | 5.0% |
| CCTTACAGTTCTCTATGCCG+GGG | + | chr6_2:53399246-53399265 | None:intergenic | 50.0% | |
| ! | GGAAAGGCCTTATGGAAGTC+GGG | - | chr6_2:53399444-53399463 | Msa0920000:CDS | 50.0% |
| ! | GAAAGGCCTTATGGAAGTCG+GGG | - | chr6_2:53399445-53399464 | Msa0920000:CDS | 50.0% |
| ! | ACAGAAGGAAGAGGTATGCC+CGG | + | chr6_2:53399609-53399628 | None:intergenic | 50.0% |
| GAAAGACGCACAGAAGGAAG+AGG | + | chr6_2:53399618-53399637 | None:intergenic | 50.0% | |
| CAGAACAACAGGGAAAGACC+CGG | - | chr6_2:53399650-53399669 | Msa0920000:intron | 50.0% | |
| CTTATTCGTAGTTGGGAGGG+GGG | - | chr6_2:53399777-53399796 | Msa0920000:intron | 50.0% | |
| ATGATATCTATGCCGGCCGT+CGG | - | chr6_2:53399960-53399979 | Msa0920000:intron | 50.0% | |
| CTTCATTTGATTCCGACGGC+CGG | + | chr6_2:53399975-53399994 | None:intergenic | 50.0% | |
| GGCCGTCGGAATCAAATGAA+GGG | - | chr6_2:53399974-53399993 | Msa0920000:intron | 50.0% | |
| GCCGTCGGAATCAAATGAAG+GGG | - | chr6_2:53399975-53399994 | Msa0920000:intron | 50.0% | |
| GCCCCTTCATTTGATTCCGA+CGG | + | chr6_2:53399979-53399998 | None:intergenic | 50.0% | |
| TCGGAATCAAATGAAGGGGC+CGG | - | chr6_2:53399979-53399998 | Msa0920000:intron | 50.0% | |
| CCAGGACAACTGAGATCTTC+CGG | + | chr6_2:53400058-53400077 | None:intergenic | 50.0% | |
| TAAACCTCTTCCGTAGAGGC+AGG | + | chr6_2:53400229-53400248 | None:intergenic | 50.0% | |
| GAGGTTTACTTTGTACCGCC+CGG | - | chr6_2:53400241-53400260 | Msa0920000:CDS | 50.0% | |
| CTATCTATATGACCTCCGGG+CGG | + | chr6_2:53400259-53400278 | None:intergenic | 50.0% | |
| CCTTTCGTTCTTATCGCTCC+GGG | + | chr6_2:53400285-53400304 | None:intergenic | 50.0% | |
| CCCTTTCGTTCTTATCGCTC+CGG | + | chr6_2:53400286-53400305 | None:intergenic | 50.0% | |
| CCGGAGCGATAAGAACGAAA+GGG | - | chr6_2:53400283-53400302 | Msa0920000:CDS | 50.0% | |
| ! | TCGCCCTACCGAAGTACTAA+AGG | + | chr6_2:53400426-53400445 | None:intergenic | 50.0% |
| TTTCCTTCGAAAGGAGACCG+GGG | + | chr6_2:53400596-53400615 | None:intergenic | 50.0% | |
| CTTTCCTTCGAAAGGAGACC+GGG | + | chr6_2:53400597-53400616 | None:intergenic | 50.0% | |
| CCTTTCCTTCGAAAGGAGAC+CGG | + | chr6_2:53400598-53400617 | None:intergenic | 50.0% | |
| AGGCCTTCGCATTCCTAATC+CGG | - | chr6_2:53400615-53400634 | Msa0920000:intron | 50.0% | |
| ! | CTACCGGATTAGGAATGCGA+AGG | + | chr6_2:53400621-53400640 | None:intergenic | 50.0% |
| CTTCGCATTCCTAATCCGGT+AGG | - | chr6_2:53400619-53400638 | Msa0920000:intron | 50.0% | |
| TCGCATTCCTAATCCGGTAG+GGG | - | chr6_2:53400621-53400640 | Msa0920000:intron | 50.0% | |
| ! | GGATGCGATTAGCCAAGCTA+GGG | + | chr6_2:53400665-53400684 | None:intergenic | 50.0% |
| AGACTGAGCGAGAACGGTAA+GGG | + | chr6_2:53400708-53400727 | None:intergenic | 50.0% | |
| AAGACTGAGCGAGAACGGTA+AGG | + | chr6_2:53400709-53400728 | None:intergenic | 50.0% | |
| ! | CTCGTATTTTATGGTCGGCG+TGG | + | chr6_2:53400773-53400792 | None:intergenic | 50.0% |
| CCTTACAGTTCTCTATGCCG+GGG | + | chr6_2:53399246-53399265 | None:intergenic | 50.0% | |
| ! | GGAAAGGCCTTATGGAAGTC+GGG | - | chr6_2:53399444-53399463 | Msa0920000:CDS | 50.0% |
| ! | GAAAGGCCTTATGGAAGTCG+GGG | - | chr6_2:53399445-53399464 | Msa0920000:CDS | 50.0% |
| ! | ACAGAAGGAAGAGGTATGCC+CGG | + | chr6_2:53399609-53399628 | None:intergenic | 50.0% |
| GAAAGACGCACAGAAGGAAG+AGG | + | chr6_2:53399618-53399637 | None:intergenic | 50.0% | |
| CAGAACAACAGGGAAAGACC+CGG | - | chr6_2:53399650-53399669 | Msa0920000:intron | 50.0% | |
| CTTATTCGTAGTTGGGAGGG+GGG | - | chr6_2:53399777-53399796 | Msa0920000:intron | 50.0% | |
| ATGATATCTATGCCGGCCGT+CGG | - | chr6_2:53399960-53399979 | Msa0920000:intron | 50.0% | |
| CTTCATTTGATTCCGACGGC+CGG | + | chr6_2:53399975-53399994 | None:intergenic | 50.0% | |
| GGCCGTCGGAATCAAATGAA+GGG | - | chr6_2:53399974-53399993 | Msa0920000:intron | 50.0% | |
| GCCGTCGGAATCAAATGAAG+GGG | - | chr6_2:53399975-53399994 | Msa0920000:intron | 50.0% | |
| GCCCCTTCATTTGATTCCGA+CGG | + | chr6_2:53399979-53399998 | None:intergenic | 50.0% | |
| TCGGAATCAAATGAAGGGGC+CGG | - | chr6_2:53399979-53399998 | Msa0920000:intron | 50.0% | |
| CCAGGACAACTGAGATCTTC+CGG | + | chr6_2:53400058-53400077 | None:intergenic | 50.0% | |
| TAAACCTCTTCCGTAGAGGC+AGG | + | chr6_2:53400229-53400248 | None:intergenic | 50.0% | |
| GAGGTTTACTTTGTACCGCC+CGG | - | chr6_2:53400241-53400260 | Msa0920000:CDS | 50.0% | |
| CTATCTATATGACCTCCGGG+CGG | + | chr6_2:53400259-53400278 | None:intergenic | 50.0% | |
| CCTTTCGTTCTTATCGCTCC+GGG | + | chr6_2:53400285-53400304 | None:intergenic | 50.0% | |
| CCCTTTCGTTCTTATCGCTC+CGG | + | chr6_2:53400286-53400305 | None:intergenic | 50.0% | |
| CCGGAGCGATAAGAACGAAA+GGG | - | chr6_2:53400283-53400302 | Msa0920000:CDS | 50.0% | |
| ! | TCGCCCTACCGAAGTACTAA+AGG | + | chr6_2:53400426-53400445 | None:intergenic | 50.0% |
| TTTCCTTCGAAAGGAGACCG+GGG | + | chr6_2:53400596-53400615 | None:intergenic | 50.0% | |
| CTTTCCTTCGAAAGGAGACC+GGG | + | chr6_2:53400597-53400616 | None:intergenic | 50.0% | |
| CCTTTCCTTCGAAAGGAGAC+CGG | + | chr6_2:53400598-53400617 | None:intergenic | 50.0% | |
| AGGCCTTCGCATTCCTAATC+CGG | - | chr6_2:53400615-53400634 | Msa0920000:intron | 50.0% | |
| ! | CTACCGGATTAGGAATGCGA+AGG | + | chr6_2:53400621-53400640 | None:intergenic | 50.0% |
| CTTCGCATTCCTAATCCGGT+AGG | - | chr6_2:53400619-53400638 | Msa0920000:intron | 50.0% | |
| TCGCATTCCTAATCCGGTAG+GGG | - | chr6_2:53400621-53400640 | Msa0920000:intron | 50.0% | |
| ! | GGATGCGATTAGCCAAGCTA+GGG | + | chr6_2:53400665-53400684 | None:intergenic | 50.0% |
| AGACTGAGCGAGAACGGTAA+GGG | + | chr6_2:53400708-53400727 | None:intergenic | 50.0% | |
| AAGACTGAGCGAGAACGGTA+AGG | + | chr6_2:53400709-53400728 | None:intergenic | 50.0% | |
| ! | CTCGTATTTTATGGTCGGCG+TGG | + | chr6_2:53400773-53400792 | None:intergenic | 50.0% |
| ATGGCTAGAGCAATGGGAGG+GGG | - | chr6_2:53399220-53399239 | Msa0920000:CDS | 55.0% | |
| CCCCGGCATAGAGAACTGTA+AGG | - | chr6_2:53399243-53399262 | Msa0920000:CDS | 55.0% | |
| !! | AAAGCAAGGAGCACTACGGG+AGG | - | chr6_2:53399412-53399431 | Msa0920000:CDS | 55.0% |
| CACTACGGGAGGTCAAACCA+AGG | - | chr6_2:53399423-53399442 | Msa0920000:CDS | 55.0% | |
| CGGGAGGTCAAACCAAGGAA+AGG | - | chr6_2:53399428-53399447 | Msa0920000:CDS | 55.0% | |
| CCACGAGAAAGACGCACAGA+AGG | + | chr6_2:53399624-53399643 | None:intergenic | 55.0% | |
| CCTTCTGTGCGTCTTTCTCG+TGG | - | chr6_2:53399621-53399640 | Msa0920000:intron | 55.0% | |
| TCTGTGCGTCTTTCTCGTGG+CGG | - | chr6_2:53399624-53399643 | Msa0920000:intron | 55.0% | |
| ! | GTGGCGGGAACAGAACAACA+GGG | - | chr6_2:53399640-53399659 | Msa0920000:intron | 55.0% |
| CGGCCGTCGGAATCAAATGA+AGG | - | chr6_2:53399973-53399992 | Msa0920000:intron | 55.0% | |
| CGGAATCAAATGAAGGGGCC+GGG | - | chr6_2:53399980-53399999 | Msa0920000:intron | 55.0% | |
| GTCTGGTCTGAATTCAGGCC+CGG | + | chr6_2:53400001-53400020 | None:intergenic | 55.0% | |
| CCGGAAGATCTCAGTTGTCC+TGG | - | chr6_2:53400055-53400074 | Msa0920000:CDS | 55.0% | |
| CGTAGAGATCTTCGTGGGAC+CGG | - | chr6_2:53400090-53400109 | Msa0920000:CDS | 55.0% | |
| GTAGAGATCTTCGTGGGACC+GGG | - | chr6_2:53400091-53400110 | Msa0920000:CDS | 55.0% | |
| TAGAGATCTTCGTGGGACCG+GGG | - | chr6_2:53400092-53400111 | Msa0920000:CDS | 55.0% | |
| ATCGATTGAGACTCCCTCCC+CGG | + | chr6_2:53400112-53400131 | None:intergenic | 55.0% | |
| ACTACCTGCCTCTACGGAAG+AGG | - | chr6_2:53400222-53400241 | Msa0920000:CDS | 55.0% | |
| GTTTACTTTGTACCGCCCGG+AGG | - | chr6_2:53400244-53400263 | Msa0920000:CDS | 55.0% | |
| CCCGGAGCGATAAGAACGAA+AGG | - | chr6_2:53400282-53400301 | Msa0920000:CDS | 55.0% | |
| GTGGCCACAGCTACAACTAC+TGG | - | chr6_2:53400311-53400330 | Msa0920000:CDS | 55.0% | |
| AGCGCCAGTAGTTGTAGCTG+TGG | + | chr6_2:53400318-53400337 | None:intergenic | 55.0% | |
| GAGCAGCCCTTAAACCGGTT+TGG | - | chr6_2:53400444-53400463 | Msa0920000:intron | 55.0% | |
| TTTCCCCGGTCTCCTTTCGA+AGG | - | chr6_2:53400590-53400609 | Msa0920000:intron | 55.0% | |
| CCGGTCTCCTTTCGAAGGAA+AGG | - | chr6_2:53400595-53400614 | Msa0920000:intron | 55.0% | |
| GCGAAGGCCTTTCCTTCGAA+AGG | + | chr6_2:53400605-53400624 | None:intergenic | 55.0% | |
| CGCATTCCTAATCCGGTAGG+GGG | - | chr6_2:53400622-53400641 | Msa0920000:intron | 55.0% | |
| CTAGGGCAAACAAAGCCGTC+CGG | + | chr6_2:53400648-53400667 | None:intergenic | 55.0% | |
| !! | CGGCTTTGTTTGCCCTAGCT+TGG | - | chr6_2:53400650-53400669 | Msa0920000:intron | 55.0% |
| ! | GGGATGCGATTAGCCAAGCT+AGG | + | chr6_2:53400666-53400685 | None:intergenic | 55.0% |
| GACTGAGCGAGAACGGTAAG+GGG | + | chr6_2:53400707-53400726 | None:intergenic | 55.0% | |
| GCTCAGTCTTTGCAACGGCT+GGG | - | chr6_2:53400719-53400738 | Msa0920000:intron | 55.0% | |
| CTCAGTCTTTGCAACGGCTG+GGG | - | chr6_2:53400720-53400739 | Msa0920000:intron | 55.0% | |
| TTTATGGTCGGCGTGGCGAT+AGG | + | chr6_2:53400766-53400785 | None:intergenic | 55.0% | |
| ATGGCTAGAGCAATGGGAGG+GGG | - | chr6_2:53399220-53399239 | Msa0920000:CDS | 55.0% | |
| CCCCGGCATAGAGAACTGTA+AGG | - | chr6_2:53399243-53399262 | Msa0920000:CDS | 55.0% | |
| !! | AAAGCAAGGAGCACTACGGG+AGG | - | chr6_2:53399412-53399431 | Msa0920000:CDS | 55.0% |
| CACTACGGGAGGTCAAACCA+AGG | - | chr6_2:53399423-53399442 | Msa0920000:CDS | 55.0% | |
| CGGGAGGTCAAACCAAGGAA+AGG | - | chr6_2:53399428-53399447 | Msa0920000:CDS | 55.0% | |
| CCACGAGAAAGACGCACAGA+AGG | + | chr6_2:53399624-53399643 | None:intergenic | 55.0% | |
| CCTTCTGTGCGTCTTTCTCG+TGG | - | chr6_2:53399621-53399640 | Msa0920000:intron | 55.0% | |
| TCTGTGCGTCTTTCTCGTGG+CGG | - | chr6_2:53399624-53399643 | Msa0920000:intron | 55.0% | |
| ! | GTGGCGGGAACAGAACAACA+GGG | - | chr6_2:53399640-53399659 | Msa0920000:intron | 55.0% |
| CGGCCGTCGGAATCAAATGA+AGG | - | chr6_2:53399973-53399992 | Msa0920000:intron | 55.0% | |
| CGGAATCAAATGAAGGGGCC+GGG | - | chr6_2:53399980-53399999 | Msa0920000:intron | 55.0% | |
| GTCTGGTCTGAATTCAGGCC+CGG | + | chr6_2:53400001-53400020 | None:intergenic | 55.0% | |
| CCGGAAGATCTCAGTTGTCC+TGG | - | chr6_2:53400055-53400074 | Msa0920000:CDS | 55.0% | |
| CGTAGAGATCTTCGTGGGAC+CGG | - | chr6_2:53400090-53400109 | Msa0920000:CDS | 55.0% | |
| GTAGAGATCTTCGTGGGACC+GGG | - | chr6_2:53400091-53400110 | Msa0920000:CDS | 55.0% | |
| TAGAGATCTTCGTGGGACCG+GGG | - | chr6_2:53400092-53400111 | Msa0920000:CDS | 55.0% | |
| ATCGATTGAGACTCCCTCCC+CGG | + | chr6_2:53400112-53400131 | None:intergenic | 55.0% | |
| ACTACCTGCCTCTACGGAAG+AGG | - | chr6_2:53400222-53400241 | Msa0920000:CDS | 55.0% | |
| GTTTACTTTGTACCGCCCGG+AGG | - | chr6_2:53400244-53400263 | Msa0920000:CDS | 55.0% | |
| CCCGGAGCGATAAGAACGAA+AGG | - | chr6_2:53400282-53400301 | Msa0920000:CDS | 55.0% | |
| GTGGCCACAGCTACAACTAC+TGG | - | chr6_2:53400311-53400330 | Msa0920000:CDS | 55.0% | |
| AGCGCCAGTAGTTGTAGCTG+TGG | + | chr6_2:53400318-53400337 | None:intergenic | 55.0% | |
| GAGCAGCCCTTAAACCGGTT+TGG | - | chr6_2:53400444-53400463 | Msa0920000:intron | 55.0% | |
| TTTCCCCGGTCTCCTTTCGA+AGG | - | chr6_2:53400590-53400609 | Msa0920000:intron | 55.0% | |
| CCGGTCTCCTTTCGAAGGAA+AGG | - | chr6_2:53400595-53400614 | Msa0920000:intron | 55.0% | |
| GCGAAGGCCTTTCCTTCGAA+AGG | + | chr6_2:53400605-53400624 | None:intergenic | 55.0% | |
| CGCATTCCTAATCCGGTAGG+GGG | - | chr6_2:53400622-53400641 | Msa0920000:intron | 55.0% | |
| CTAGGGCAAACAAAGCCGTC+CGG | + | chr6_2:53400648-53400667 | None:intergenic | 55.0% | |
| !! | CGGCTTTGTTTGCCCTAGCT+TGG | - | chr6_2:53400650-53400669 | Msa0920000:intron | 55.0% |
| ! | GGGATGCGATTAGCCAAGCT+AGG | + | chr6_2:53400666-53400685 | None:intergenic | 55.0% |
| GACTGAGCGAGAACGGTAAG+GGG | + | chr6_2:53400707-53400726 | None:intergenic | 55.0% | |
| GCTCAGTCTTTGCAACGGCT+GGG | - | chr6_2:53400719-53400738 | Msa0920000:intron | 55.0% | |
| CTCAGTCTTTGCAACGGCTG+GGG | - | chr6_2:53400720-53400739 | Msa0920000:intron | 55.0% | |
| TTTATGGTCGGCGTGGCGAT+AGG | + | chr6_2:53400766-53400785 | None:intergenic | 55.0% | |
| AGGAGTTGCGGGCAAGTGCT+TGG | - | chr6_2:53399298-53399317 | Msa0920000:CDS | 60.0% | |
| GTTGCGGGCAAGTGCTTGGT+AGG | - | chr6_2:53399302-53399321 | Msa0920000:CDS | 60.0% | |
| AGGCCAACAGCCCAGTGAAC+CGG | - | chr6_2:53399322-53399341 | Msa0920000:CDS | 60.0% | |
| GACGAGCCCCGACTTCCATA+AGG | + | chr6_2:53399454-53399473 | None:intergenic | 60.0% | |
| GGCTCGTCCCCGGTCAATAT+TGG | - | chr6_2:53399466-53399485 | Msa0920000:CDS | 60.0% | |
| CTGTGCGTCTTTCTCGTGGC+GGG | - | chr6_2:53399625-53399644 | Msa0920000:intron | 60.0% | |
| ! | CGTGGCGGGAACAGAACAAC+AGG | - | chr6_2:53399639-53399658 | Msa0920000:intron | 60.0% |
| AAAGCTCGCCCTCGAGCCTT+GGG | + | chr6_2:53399684-53399703 | None:intergenic | 60.0% | |
| TAAAGCTCGCCCTCGAGCCT+TGG | + | chr6_2:53399685-53399704 | None:intergenic | 60.0% | |
| TTCGTAGTTGGGAGGGGGGA+AGG | - | chr6_2:53399781-53399800 | Msa0920000:intron | 60.0% | |
| AGGGCGAGCAGCCCTTAAAC+CGG | - | chr6_2:53400439-53400458 | Msa0920000:intron | 60.0% | |
| TTCCTAATCCGGTAGGGGGC+CGG | - | chr6_2:53400626-53400645 | Msa0920000:intron | 60.0% | |
| CGCTCAGTCTTTGCAACGGC+TGG | - | chr6_2:53400718-53400737 | Msa0920000:intron | 60.0% | |
| AGTCTTTGCAACGGCTGGGG+AGG | - | chr6_2:53400723-53400742 | Msa0920000:intron | 60.0% | |
| ! | TAAGCGCTCTTGGGTGGGCT+GGG | + | chr6_2:53400829-53400848 | None:intergenic | 60.0% |
| ATAAGCGCTCTTGGGTGGGC+TGG | + | chr6_2:53400830-53400849 | None:intergenic | 60.0% | |
| AGGAGTTGCGGGCAAGTGCT+TGG | - | chr6_2:53399298-53399317 | Msa0920000:CDS | 60.0% | |
| GTTGCGGGCAAGTGCTTGGT+AGG | - | chr6_2:53399302-53399321 | Msa0920000:CDS | 60.0% | |
| AGGCCAACAGCCCAGTGAAC+CGG | - | chr6_2:53399322-53399341 | Msa0920000:CDS | 60.0% | |
| GACGAGCCCCGACTTCCATA+AGG | + | chr6_2:53399454-53399473 | None:intergenic | 60.0% | |
| GGCTCGTCCCCGGTCAATAT+TGG | - | chr6_2:53399466-53399485 | Msa0920000:CDS | 60.0% | |
| CTGTGCGTCTTTCTCGTGGC+GGG | - | chr6_2:53399625-53399644 | Msa0920000:intron | 60.0% | |
| ! | CGTGGCGGGAACAGAACAAC+AGG | - | chr6_2:53399639-53399658 | Msa0920000:intron | 60.0% |
| AAAGCTCGCCCTCGAGCCTT+GGG | + | chr6_2:53399684-53399703 | None:intergenic | 60.0% | |
| TAAAGCTCGCCCTCGAGCCT+TGG | + | chr6_2:53399685-53399704 | None:intergenic | 60.0% | |
| TTCGTAGTTGGGAGGGGGGA+AGG | - | chr6_2:53399781-53399800 | Msa0920000:intron | 60.0% | |
| AGGGCGAGCAGCCCTTAAAC+CGG | - | chr6_2:53400439-53400458 | Msa0920000:intron | 60.0% | |
| TTCCTAATCCGGTAGGGGGC+CGG | - | chr6_2:53400626-53400645 | Msa0920000:intron | 60.0% | |
| CGCTCAGTCTTTGCAACGGC+TGG | - | chr6_2:53400718-53400737 | Msa0920000:intron | 60.0% | |
| AGTCTTTGCAACGGCTGGGG+AGG | - | chr6_2:53400723-53400742 | Msa0920000:intron | 60.0% | |
| ! | TAAGCGCTCTTGGGTGGGCT+GGG | + | chr6_2:53400829-53400848 | None:intergenic | 60.0% |
| ATAAGCGCTCTTGGGTGGGC+TGG | + | chr6_2:53400830-53400849 | None:intergenic | 60.0% | |
| GGCCAACAGCCCAGTGAACC+GGG | - | chr6_2:53399323-53399342 | Msa0920000:CDS | 65.0% | |
| CAACAGCCCAGTGAACCGGG+CGG | - | chr6_2:53399326-53399345 | Msa0920000:CDS | 65.0% | |
| AACAGCCCAGTGAACCGGGC+GGG | - | chr6_2:53399327-53399346 | Msa0920000:CDS | 65.0% | |
| TCAACGGATCCTCCGCGCTC+CGG | - | chr6_2:53399587-53399606 | Msa0920000:intron | 65.0% | |
| ! | GAAGAGGTATGCCCGGAGCG+CGG | + | chr6_2:53399602-53399621 | None:intergenic | 65.0% |
| ATCTTCCGGTCTGCGCGCGT+GGG | + | chr6_2:53400044-53400063 | None:intergenic | 65.0% | |
| AGATCTTCGTGGGACCGGGG+AGG | - | chr6_2:53400095-53400114 | Msa0920000:CDS | 65.0% | |
| GATCTTCGTGGGACCGGGGA+GGG | - | chr6_2:53400096-53400115 | Msa0920000:CDS | 65.0% | |
| TAATCCGGTAGGGGGCCGGA+CGG | - | chr6_2:53400630-53400649 | Msa0920000:intron | 65.0% | |
| GGCGAGAATGTCGTTGCGCG+GGG | + | chr6_2:53400686-53400705 | None:intergenic | 65.0% | |
| GGGCGAGAATGTCGTTGCGC+GGG | + | chr6_2:53400687-53400706 | None:intergenic | 65.0% | |
| GGGGCGAGAATGTCGTTGCG+CGG | + | chr6_2:53400688-53400707 | None:intergenic | 65.0% | |
| GGCCAACAGCCCAGTGAACC+GGG | - | chr6_2:53399323-53399342 | Msa0920000:CDS | 65.0% | |
| CAACAGCCCAGTGAACCGGG+CGG | - | chr6_2:53399326-53399345 | Msa0920000:CDS | 65.0% | |
| AACAGCCCAGTGAACCGGGC+GGG | - | chr6_2:53399327-53399346 | Msa0920000:CDS | 65.0% | |
| TCAACGGATCCTCCGCGCTC+CGG | - | chr6_2:53399587-53399606 | Msa0920000:intron | 65.0% | |
| ! | GAAGAGGTATGCCCGGAGCG+CGG | + | chr6_2:53399602-53399621 | None:intergenic | 65.0% |
| ATCTTCCGGTCTGCGCGCGT+GGG | + | chr6_2:53400044-53400063 | None:intergenic | 65.0% | |
| AGATCTTCGTGGGACCGGGG+AGG | - | chr6_2:53400095-53400114 | Msa0920000:CDS | 65.0% | |
| GATCTTCGTGGGACCGGGGA+GGG | - | chr6_2:53400096-53400115 | Msa0920000:CDS | 65.0% | |
| TAATCCGGTAGGGGGCCGGA+CGG | - | chr6_2:53400630-53400649 | Msa0920000:intron | 65.0% | |
| GGCGAGAATGTCGTTGCGCG+GGG | + | chr6_2:53400686-53400705 | None:intergenic | 65.0% | |
| GGGCGAGAATGTCGTTGCGC+GGG | + | chr6_2:53400687-53400706 | None:intergenic | 65.0% | |
| GGGGCGAGAATGTCGTTGCG+CGG | + | chr6_2:53400688-53400707 | None:intergenic | 65.0% | |
| AGAGCAATGGGAGGGGGCCC+CGG | - | chr6_2:53399226-53399245 | Msa0920000:CDS | 70.0% | |
| TAACGAGCGCTCCGCCCGCT+TGG | - | chr6_2:53399267-53399286 | Msa0920000:CDS | 70.0% | |
| AACTCCTGCCGCCCGCCAAG+CGG | + | chr6_2:53399285-53399304 | None:intergenic | 70.0% | |
| ! | TTGGCGGGCGGCAGGAGTTG+CGG | - | chr6_2:53399286-53399305 | Msa0920000:CDS | 70.0% |
| CGCCCGGTTCACTGGGCTGT+TGG | + | chr6_2:53399328-53399347 | None:intergenic | 70.0% | |
| ACAGCCCAGTGAACCGGGCG+GGG | - | chr6_2:53399328-53399347 | Msa0920000:CDS | 70.0% | |
| AGTGCCCCGCCCGGTTCACT+GGG | + | chr6_2:53399335-53399354 | None:intergenic | 70.0% | |
| CTTTCGTCGAGTGCCCCGCC+CGG | + | chr6_2:53399344-53399363 | None:intergenic | 70.0% | |
| ! | GGGCGGGGCACTCGACGAAA+GGG | - | chr6_2:53399343-53399362 | Msa0920000:CDS | 70.0% |
| ! | GGCGGGGCACTCGACGAAAG+GGG | - | chr6_2:53399344-53399363 | Msa0920000:CDS | 70.0% |
| ! | GCGGGGCACTCGACGAAAGG+GGG | - | chr6_2:53399345-53399364 | Msa0920000:CDS | 70.0% |
| TGGAAGTCGGGGCTCGTCCC+CGG | - | chr6_2:53399456-53399475 | Msa0920000:CDS | 70.0% | |
| CAACGGATCCTCCGCGCTCC+GGG | - | chr6_2:53399588-53399607 | Msa0920000:intron | 70.0% | |
| CCCTCGAGCCTTGGGCAGGT+CGG | + | chr6_2:53399676-53399695 | None:intergenic | 70.0% | |
| CCGACCTGCCCAAGGCTCGA+GGG | - | chr6_2:53399673-53399692 | Msa0920000:intron | 70.0% | |
| GATCTTCCGGTCTGCGCGCG+TGG | + | chr6_2:53400045-53400064 | None:intergenic | 70.0% | |
| GTCCGGCCCCCTACCGGATT+AGG | + | chr6_2:53400631-53400650 | None:intergenic | 70.0% | |
| AAAGCCGTCCGGCCCCCTAC+CGG | + | chr6_2:53400637-53400656 | None:intergenic | 70.0% | |
| AGAGCAATGGGAGGGGGCCC+CGG | - | chr6_2:53399226-53399245 | Msa0920000:CDS | 70.0% | |
| TAACGAGCGCTCCGCCCGCT+TGG | - | chr6_2:53399267-53399286 | Msa0920000:CDS | 70.0% | |
| AACTCCTGCCGCCCGCCAAG+CGG | + | chr6_2:53399285-53399304 | None:intergenic | 70.0% | |
| ! | TTGGCGGGCGGCAGGAGTTG+CGG | - | chr6_2:53399286-53399305 | Msa0920000:CDS | 70.0% |
| CGCCCGGTTCACTGGGCTGT+TGG | + | chr6_2:53399328-53399347 | None:intergenic | 70.0% | |
| ACAGCCCAGTGAACCGGGCG+GGG | - | chr6_2:53399328-53399347 | Msa0920000:CDS | 70.0% | |
| AGTGCCCCGCCCGGTTCACT+GGG | + | chr6_2:53399335-53399354 | None:intergenic | 70.0% | |
| CTTTCGTCGAGTGCCCCGCC+CGG | + | chr6_2:53399344-53399363 | None:intergenic | 70.0% | |
| ! | GGGCGGGGCACTCGACGAAA+GGG | - | chr6_2:53399343-53399362 | Msa0920000:CDS | 70.0% |
| ! | GGCGGGGCACTCGACGAAAG+GGG | - | chr6_2:53399344-53399363 | Msa0920000:CDS | 70.0% |
| ! | GCGGGGCACTCGACGAAAGG+GGG | - | chr6_2:53399345-53399364 | Msa0920000:CDS | 70.0% |
| TGGAAGTCGGGGCTCGTCCC+CGG | - | chr6_2:53399456-53399475 | Msa0920000:CDS | 70.0% | |
| CAACGGATCCTCCGCGCTCC+GGG | - | chr6_2:53399588-53399607 | Msa0920000:intron | 70.0% | |
| CCCTCGAGCCTTGGGCAGGT+CGG | + | chr6_2:53399676-53399695 | None:intergenic | 70.0% | |
| CCGACCTGCCCAAGGCTCGA+GGG | - | chr6_2:53399673-53399692 | Msa0920000:intron | 70.0% | |
| GATCTTCCGGTCTGCGCGCG+TGG | + | chr6_2:53400045-53400064 | None:intergenic | 70.0% | |
| GTCCGGCCCCCTACCGGATT+AGG | + | chr6_2:53400631-53400650 | None:intergenic | 70.0% | |
| AAAGCCGTCCGGCCCCCTAC+CGG | + | chr6_2:53400637-53400656 | None:intergenic | 70.0% | |
| ACTCCTGCCGCCCGCCAAGC+GGG | + | chr6_2:53399284-53399303 | None:intergenic | 75.0% | |
| ! | TGGCGGGCGGCAGGAGTTGC+GGG | - | chr6_2:53399287-53399306 | Msa0920000:CDS | 75.0% |
| GAGTGCCCCGCCCGGTTCAC+TGG | + | chr6_2:53399336-53399355 | None:intergenic | 75.0% | |
| ! | CGGGCGGGGCACTCGACGAA+AGG | - | chr6_2:53399342-53399361 | Msa0920000:CDS | 75.0% |
| GAGGTATGCCCGGAGCGCGG+AGG | + | chr6_2:53399599-53399618 | None:intergenic | 75.0% | |
| AGACCCGGCCGACCTGCCCA+AGG | - | chr6_2:53399665-53399684 | Msa0920000:intron | 75.0% | |
| GAGCCTTGGGCAGGTCGGCC+GGG | + | chr6_2:53399671-53399690 | None:intergenic | 75.0% | |
| CGAGCCTTGGGCAGGTCGGC+CGG | + | chr6_2:53399672-53399691 | None:intergenic | 75.0% | |
| GCCGACCTGCCCAAGGCTCG+AGG | - | chr6_2:53399672-53399691 | Msa0920000:intron | 75.0% | |
| CTCGCCCTCGAGCCTTGGGC+AGG | + | chr6_2:53399680-53399699 | None:intergenic | 75.0% | |
| CTGCTCCCACGCGCGCAGAC+CGG | - | chr6_2:53400036-53400055 | Msa0920000:intron | 75.0% | |
| ACTCCTGCCGCCCGCCAAGC+GGG | + | chr6_2:53399284-53399303 | None:intergenic | 75.0% | |
| ! | TGGCGGGCGGCAGGAGTTGC+GGG | - | chr6_2:53399287-53399306 | Msa0920000:CDS | 75.0% |
| GAGTGCCCCGCCCGGTTCAC+TGG | + | chr6_2:53399336-53399355 | None:intergenic | 75.0% | |
| ! | CGGGCGGGGCACTCGACGAA+AGG | - | chr6_2:53399342-53399361 | Msa0920000:CDS | 75.0% |
| GAGGTATGCCCGGAGCGCGG+AGG | + | chr6_2:53399599-53399618 | None:intergenic | 75.0% | |
| AGACCCGGCCGACCTGCCCA+AGG | - | chr6_2:53399665-53399684 | Msa0920000:intron | 75.0% | |
| GAGCCTTGGGCAGGTCGGCC+GGG | + | chr6_2:53399671-53399690 | None:intergenic | 75.0% | |
| CGAGCCTTGGGCAGGTCGGC+CGG | + | chr6_2:53399672-53399691 | None:intergenic | 75.0% | |
| GCCGACCTGCCCAAGGCTCG+AGG | - | chr6_2:53399672-53399691 | Msa0920000:intron | 75.0% | |
| CTCGCCCTCGAGCCTTGGGC+AGG | + | chr6_2:53399680-53399699 | None:intergenic | 75.0% | |
| CTGCTCCCACGCGCGCAGAC+CGG | - | chr6_2:53400036-53400055 | Msa0920000:intron | 75.0% | |
| ! | CGAGCGCTCCGCCCGCTTGG+CGG | - | chr6_2:53399270-53399289 | Msa0920000:CDS | 80.0% |
| ! | GAGCGCTCCGCCCGCTTGGC+GGG | - | chr6_2:53399271-53399290 | Msa0920000:CDS | 80.0% |
| ! | CGAGCGCTCCGCCCGCTTGG+CGG | - | chr6_2:53399270-53399289 | Msa0920000:CDS | 80.0% |
| ! | GAGCGCTCCGCCCGCTTGGC+GGG | - | chr6_2:53399271-53399290 | Msa0920000:CDS | 80.0% |
| ! | CGCTCCGCCCGCTTGGCGGG+CGG | - | chr6_2:53399274-53399293 | Msa0920000:CDS | 85.0% |
| ! | CCTGCCGCCCGCCAAGCGGG+CGG | + | chr6_2:53399281-53399300 | None:intergenic | 85.0% |
| ! | CGCTCCGCCCGCTTGGCGGG+CGG | - | chr6_2:53399274-53399293 | Msa0920000:CDS | 85.0% |
| ! | CCTGCCGCCCGCCAAGCGGG+CGG | + | chr6_2:53399281-53399300 | None:intergenic | 85.0% |
| !! | CCGCCCGCTTGGCGGGCGGC+AGG | - | chr6_2:53399278-53399297 | Msa0920000:CDS | 90.0% |
| !! | CCGCCCGCTTGGCGGGCGGC+AGG | - | chr6_2:53399278-53399297 | Msa0920000:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53399220 | 53400903 | 53399220 | ID=Msa0920000;Name=Msa0920000 |
| chr6_2 | mRNA | 53399220 | 53400903 | 53399220 | ID=Msa0920000-mRNA-1;Parent=Msa0920000;Name=Msa0920000-mRNA-1;_AED=0.34;_eAED=0.41;_QI=0|0|0|1|0.25|0.2|5|0|250 |
| chr6_2 | exon | 53400788 | 53400903 | 53400788 | ID=Msa0920000-mRNA-1:exon:7989;Parent=Msa0920000-mRNA-1 |
| chr6_2 | exon | 53400493 | 53400577 | 53400493 | ID=Msa0920000-mRNA-1:exon:7988;Parent=Msa0920000-mRNA-1 |
| chr6_2 | exon | 53400215 | 53400335 | 53400215 | ID=Msa0920000-mRNA-1:exon:7987;Parent=Msa0920000-mRNA-1 |
| chr6_2 | exon | 53400037 | 53400175 | 53400037 | ID=Msa0920000-mRNA-1:exon:7986;Parent=Msa0920000-mRNA-1 |
| chr6_2 | exon | 53399220 | 53399511 | 53399220 | ID=Msa0920000-mRNA-1:exon:7985;Parent=Msa0920000-mRNA-1 |
| chr6_2 | CDS | 53400788 | 53400903 | 53400788 | ID=Msa0920000-mRNA-1:cds;Parent=Msa0920000-mRNA-1 |
| chr6_2 | CDS | 53400493 | 53400577 | 53400493 | ID=Msa0920000-mRNA-1:cds;Parent=Msa0920000-mRNA-1 |
| chr6_2 | CDS | 53400215 | 53400335 | 53400215 | ID=Msa0920000-mRNA-1:cds;Parent=Msa0920000-mRNA-1 |
| chr6_2 | CDS | 53400037 | 53400175 | 53400037 | ID=Msa0920000-mRNA-1:cds;Parent=Msa0920000-mRNA-1 |
| chr6_2 | CDS | 53399220 | 53399511 | 53399220 | ID=Msa0920000-mRNA-1:cds;Parent=Msa0920000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
