Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032300 | XP_003624755.1 | 98.418 | 316 | 5 | 0 | 1 | 316 | 1 | 316 | 0.0 | 638 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032300 | sp|O22682|CYSK4_ARATH | 81.641 | 256 | 47 | 0 | 61 | 316 | 95 | 350 | 3.61e-145 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032300 | G7L2L5 | 98.418 | 316 | 5 | 0 | 1 | 316 | 1 | 316 | 0.0 | 638 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026110 | Msa1032300 | 0.831497 | 1.614494e-55 | -8.615850e-47 |
| Msa0767520 | Msa1032300 | 0.807117 | 5.912198e-50 | -8.615850e-47 |
| Msa0806720 | Msa1032300 | 0.821400 | 4.119713e-53 | -8.615850e-47 |
| Msa0806760 | Msa1032300 | 0.815268 | 1.008590e-51 | -8.615850e-47 |
| Msa0121800 | Msa1032300 | 0.828839 | 7.191598e-55 | -8.615850e-47 |
| Msa0166570 | Msa1032300 | 0.834607 | 2.718396e-56 | -8.615850e-47 |
| Msa0171920 | Msa1032300 | 0.815360 | 9.622048e-52 | -8.615850e-47 |
| Msa1032300 | Msa1072340 | 0.825696 | 4.071509e-54 | -8.615850e-47 |
| Msa1032300 | Msa1118150 | 0.851261 | 9.959147e-61 | -8.615850e-47 |
| Msa1032300 | Msa1144700 | 0.804045 | 2.607904e-49 | -8.615850e-47 |
| Msa1032300 | Msa1159350 | 0.816866 | 4.434024e-52 | -8.615850e-47 |
| Msa1032300 | Msa1177240 | 0.849311 | 3.507199e-60 | -8.615850e-47 |
| Msa1032300 | Msa1317030 | 0.835074 | 2.073294e-56 | -8.615850e-47 |
| Msa1032300 | Msa1380720 | 0.803705 | 3.068669e-49 | -8.615850e-47 |
| Msa0253160 | Msa1032300 | 0.805361 | 1.385172e-49 | -8.615850e-47 |
| Msa0583740 | Msa1032300 | 0.841833 | 3.737565e-58 | -8.615850e-47 |
| Msa0945960 | Msa1032300 | 0.815809 | 7.643256e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032300 | MtrunA17_Chr7g0254401 | 98.418 | 316 | 5 | 0 | 1 | 316 | 1 | 316 | 0.0 | 638 |
| Msa1032300 | MtrunA17_Chr4g0045721 | 57.143 | 294 | 116 | 1 | 33 | 316 | 15 | 308 | 1.17e-122 | 356 |
| Msa1032300 | MtrunA17_Chr4g0045781 | 60.984 | 305 | 97 | 4 | 29 | 316 | 28 | 327 | 1.31e-118 | 347 |
| Msa1032300 | MtrunA17_Chr4g0045771 | 54.762 | 294 | 122 | 2 | 33 | 316 | 15 | 307 | 1.33e-117 | 343 |
| Msa1032300 | MtrunA17_Chr1g0191041 | 62.313 | 268 | 91 | 1 | 59 | 316 | 2 | 269 | 1.34e-112 | 329 |
| Msa1032300 | MtrunA17_Chr5g0394491 | 61.597 | 263 | 91 | 1 | 64 | 316 | 7 | 269 | 8.90e-111 | 324 |
| Msa1032300 | MtrunA17_Chr1g0205381 | 61.977 | 263 | 90 | 1 | 64 | 316 | 7 | 269 | 3.88e-110 | 323 |
| Msa1032300 | MtrunA17_Chr1g0191051 | 58.397 | 262 | 99 | 1 | 65 | 316 | 7 | 268 | 2.85e-99 | 295 |
| Msa1032300 | MtrunA17_Chr7g0248021 | 48.986 | 296 | 137 | 2 | 35 | 316 | 27 | 322 | 4.87e-97 | 291 |
| Msa1032300 | MtrunA17_Chr1g0191061 | 49.342 | 304 | 98 | 3 | 69 | 316 | 25 | 328 | 5.05e-86 | 263 |
| Msa1032300 | MtrunA17_Chr1g0191071 | 55.140 | 214 | 86 | 1 | 113 | 316 | 1 | 214 | 7.87e-67 | 210 |
| Msa1032300 | MtrunA17_Chr5g0446431 | 27.619 | 315 | 160 | 6 | 69 | 316 | 48 | 361 | 1.19e-28 | 114 |
| Msa1032300 | MtrunA17_Chr2g0310201 | 39.568 | 139 | 44 | 7 | 129 | 238 | 6 | 133 | 3.40e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032300 | AT3G03630.1 | 81.641 | 256 | 47 | 0 | 61 | 316 | 95 | 350 | 3.67e-146 | 417 |
| Msa1032300 | AT3G59760.3 | 62.687 | 268 | 90 | 1 | 59 | 316 | 107 | 374 | 9.04e-114 | 336 |
| Msa1032300 | AT3G59760.1 | 62.687 | 268 | 90 | 1 | 59 | 316 | 107 | 374 | 1.14e-113 | 336 |
| Msa1032300 | AT3G59760.2 | 62.687 | 268 | 90 | 1 | 59 | 316 | 107 | 374 | 1.22e-113 | 336 |
| Msa1032300 | AT2G43750.1 | 61.567 | 268 | 93 | 1 | 59 | 316 | 69 | 336 | 2.63e-112 | 331 |
| Msa1032300 | AT2G43750.2 | 61.567 | 268 | 93 | 1 | 59 | 316 | 69 | 336 | 2.63e-112 | 331 |
| Msa1032300 | AT4G14880.5 | 61.887 | 265 | 91 | 1 | 62 | 316 | 2 | 266 | 2.04e-109 | 321 |
| Msa1032300 | AT4G14880.3 | 61.887 | 265 | 91 | 1 | 62 | 316 | 2 | 266 | 2.04e-109 | 321 |
| Msa1032300 | AT4G14880.4 | 61.887 | 265 | 91 | 1 | 62 | 316 | 2 | 266 | 2.04e-109 | 321 |
| Msa1032300 | AT4G14880.2 | 61.887 | 265 | 91 | 1 | 62 | 316 | 2 | 266 | 2.04e-109 | 321 |
| Msa1032300 | AT4G14880.1 | 61.887 | 265 | 91 | 1 | 62 | 316 | 2 | 266 | 2.04e-109 | 321 |
| Msa1032300 | AT3G04940.1 | 56.391 | 266 | 106 | 1 | 61 | 316 | 4 | 269 | 3.42e-101 | 300 |
| Msa1032300 | AT3G04940.2 | 56.391 | 266 | 106 | 1 | 61 | 316 | 4 | 269 | 3.42e-101 | 300 |
| Msa1032300 | AT5G28030.1 | 55.639 | 266 | 108 | 1 | 61 | 316 | 3 | 268 | 1.68e-95 | 286 |
| Msa1032300 | AT5G28030.4 | 55.639 | 266 | 108 | 1 | 61 | 316 | 3 | 268 | 1.68e-95 | 286 |
| Msa1032300 | AT5G28030.5 | 55.639 | 266 | 108 | 1 | 61 | 316 | 3 | 268 | 1.68e-95 | 286 |
| Msa1032300 | AT5G28030.2 | 55.639 | 266 | 108 | 1 | 61 | 316 | 3 | 268 | 1.68e-95 | 286 |
| Msa1032300 | AT3G61440.4 | 50.350 | 286 | 129 | 2 | 45 | 317 | 26 | 311 | 7.10e-94 | 282 |
| Msa1032300 | AT3G61440.1 | 50.175 | 285 | 129 | 2 | 45 | 316 | 26 | 310 | 6.38e-93 | 281 |
| Msa1032300 | AT5G28020.2 | 54.511 | 266 | 111 | 1 | 61 | 316 | 3 | 268 | 7.40e-93 | 279 |
| Msa1032300 | AT5G28020.4 | 54.511 | 266 | 111 | 1 | 61 | 316 | 3 | 268 | 7.40e-93 | 279 |
| Msa1032300 | AT5G28020.1 | 54.511 | 266 | 111 | 1 | 61 | 316 | 3 | 268 | 7.40e-93 | 279 |
| Msa1032300 | AT5G28020.3 | 54.511 | 266 | 111 | 1 | 61 | 316 | 3 | 268 | 7.40e-93 | 279 |
| Msa1032300 | AT5G28020.6 | 54.511 | 266 | 111 | 1 | 61 | 316 | 3 | 268 | 7.40e-93 | 279 |
| Msa1032300 | AT3G22460.2 | 67.935 | 184 | 59 | 0 | 62 | 245 | 5 | 188 | 3.37e-91 | 270 |
| Msa1032300 | AT5G28030.3 | 54.183 | 251 | 105 | 1 | 61 | 301 | 3 | 253 | 3.62e-89 | 268 |
| Msa1032300 | AT3G22460.1 | 55.607 | 214 | 65 | 2 | 113 | 316 | 1 | 194 | 8.17e-77 | 236 |
| Msa1032300 | AT3G61440.2 | 52.804 | 214 | 91 | 1 | 113 | 316 | 1 | 214 | 4.35e-72 | 224 |
| Msa1032300 | AT3G61440.3 | 51.596 | 188 | 81 | 1 | 139 | 316 | 2 | 189 | 9.38e-60 | 192 |
| Msa1032300 | AT5G28020.5 | 48.352 | 182 | 84 | 1 | 145 | 316 | 1 | 182 | 2.40e-46 | 157 |
| Msa1032300 | AT1G55880.2 | 29.661 | 236 | 124 | 3 | 73 | 267 | 48 | 282 | 8.03e-29 | 114 |
| Msa1032300 | AT1G55880.1 | 26.603 | 312 | 160 | 4 | 73 | 316 | 48 | 358 | 1.34e-28 | 114 |
Find 85 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGGTAATGTTGATTTAT+TGG | 0.219728 | 7_1:-67218850 | Msa1032300:CDS |
| CTGCACCAAATGTGCGTAAA+AGG | 0.266577 | 7_1:+67219169 | None:intergenic |
| AGGTTTCATACCAAGCATTT+TGG | 0.299848 | 7_1:-67218092 | Msa1032300:CDS |
| AGCATTGGAAGAAGGATTAC+TGG | 0.317790 | 7_1:-67217710 | Msa1032300:CDS |
| AAACTACAGGGCCTGAGATA+TGG | 0.320270 | 7_1:-67218881 | Msa1032300:CDS |
| GATTTATTGGTTGCTGCTAT+TGG | 0.320316 | 7_1:-67218837 | Msa1032300:CDS |
| ATGCGGAGAAGGGGCTGAAA+GGG | 0.349505 | 7_1:-67219131 | Msa1032300:CDS |
| GGAACTGGCGGCACTATTAC+AGG | 0.362045 | 7_1:-67218816 | Msa1032300:CDS |
| TTGGTTGCTGCTATTGGAAC+TGG | 0.363826 | 7_1:-67218831 | Msa1032300:CDS |
| TGTTTCGACAGTTTGATAAC+AGG | 0.383372 | 7_1:-67219059 | Msa1032300:CDS |
| GACATCTTCGGCAATGTTAA+CGG | 0.386866 | 7_1:+67219843 | None:intergenic |
| CGGAAATTGTTCGGCGGAAA+CGG | 0.397606 | 7_1:+67219923 | None:intergenic |
| GGAGGAAGAATTGTTGTAGA+AGG | 0.410209 | 7_1:+67219982 | None:intergenic |
| CAATGTTGAAGCTATTGAAA+TGG | 0.412094 | 7_1:-67217743 | Msa1032300:CDS |
| TGGCGGTTGCGGAAATTGTT+CGG | 0.412179 | 7_1:+67219914 | None:intergenic |
| AACTACAGGGCCTGAGATAT+GGG | 0.414262 | 7_1:-67218880 | Msa1032300:CDS |
| TATTGTTTAATTAGGTGGTC+GGG | 0.421064 | 7_1:-67218278 | Msa1032300:intron |
| AATGAATGAATGCAGTTGAT+TGG | 0.422069 | 7_1:-67219673 | Msa1032300:intron |
| TGAACCTACAACTGGAAATA+CGG | 0.427191 | 7_1:-67219277 | Msa1032300:CDS |
| AGTGGAGACGGTGGCGGTTG+CGG | 0.445610 | 7_1:+67219903 | None:intergenic |
| GACACTTCTGCAAGGTTCCA+TGG | 0.445890 | 7_1:+67219579 | None:intergenic |
| AGTCCCGTATTTCCAGTTGT+AGG | 0.463176 | 7_1:+67219273 | None:intergenic |
| GGCGGCACTATTACAGGCAC+TGG | 0.468519 | 7_1:-67218810 | Msa1032300:CDS |
| CTCTCAATATTAACAGAAGC+AGG | 0.470025 | 7_1:+67219198 | None:intergenic |
| AATGCGGAGAAGGGGCTGAA+AGG | 0.474410 | 7_1:-67219132 | Msa1032300:CDS |
| CATTTCAATAGCTTCAACAT+TGG | 0.481271 | 7_1:+67217744 | None:intergenic |
| CAGATCCACTTCGAAACTAC+AGG | 0.481457 | 7_1:-67218894 | Msa1032300:CDS |
| GAGAGTGGAGCAATTTCTCC+GGG | 0.484537 | 7_1:-67219436 | Msa1032300:CDS |
| AACGGCGTCAAGTCCTTCTC+TGG | 0.489128 | 7_1:+67219861 | None:intergenic |
| ATATTGTTTAATTAGGTGGT+CGG | 0.500199 | 7_1:-67218279 | Msa1032300:intron |
| ATTGTATCCTCCCATATCTC+AGG | 0.508627 | 7_1:+67218870 | None:intergenic |
| AGGAGATTAGCATTGGAAGA+AGG | 0.512069 | 7_1:-67217718 | Msa1032300:CDS |
| AGAGAGTGGAGCAATTTCTC+CGG | 0.512757 | 7_1:-67219437 | Msa1032300:CDS |
| AATGGCAAGGAGATTAGCAT+TGG | 0.519243 | 7_1:-67217725 | Msa1032300:CDS |
| CTGTCGAAACATGTAAGCAT+TGG | 0.520384 | 7_1:+67219071 | None:intergenic |
| TGTCGAAACATGTAAGCATT+GGG | 0.521342 | 7_1:+67219072 | None:intergenic |
| GAGATTATACTTCTATCTGC+AGG | 0.521691 | 7_1:+67218249 | None:intergenic |
| TTCGGCGGAAACGGATGTTA+CGG | 0.521778 | 7_1:+67219932 | None:intergenic |
| GCAGATAGAAGTATAATCTC+AGG | 0.522284 | 7_1:-67218246 | Msa1032300:CDS |
| AAGTACCTGAGTGACATCTT+CGG | 0.537012 | 7_1:+67219831 | None:intergenic |
| ATTGTTTAATTAGGTGGTCG+GGG | 0.542024 | 7_1:-67218277 | Msa1032300:intron |
| GAAGAGTGACGGAGTGGAGA+CGG | 0.545076 | 7_1:+67219891 | None:intergenic |
| TGCGGAGAAGGGGCTGAAAG+GGG | 0.545130 | 7_1:-67219130 | Msa1032300:CDS |
| ACAACTGGAAATACGGGACT+TGG | 0.546776 | 7_1:-67219270 | Msa1032300:CDS |
| CTGCTTCTGTTAATATTGAG+AGG | 0.547745 | 7_1:-67219197 | Msa1032300:CDS |
| TGCTGCAAAACTTGAATCCA+TGG | 0.553303 | 7_1:-67219596 | Msa1032300:CDS |
| TGGAGCAATTTCTCCGGGGA+AGG | 0.557633 | 7_1:-67219431 | Msa1032300:intron |
| TGAGATATGGGAGGATACAA+TGG | 0.558055 | 7_1:-67218868 | Msa1032300:CDS |
| GAACCTACAACTGGAAATAC+GGG | 0.559847 | 7_1:-67219276 | Msa1032300:CDS |
| CTTGCAGAAGTGTCAAGGAT+AGG | 0.564739 | 7_1:-67219570 | Msa1032300:intron |
| CCTTCACAACATACCTTCCC+CGG | 0.566206 | 7_1:+67219418 | None:intergenic |
| TTTACGCACATTTGGTGCAG+AGG | 0.570954 | 7_1:-67219166 | Msa1032300:CDS |
| CGGTGGAATTGAGTGGTGAA+AGG | 0.572071 | 7_1:+67219952 | None:intergenic |
| ATAATCTCAGGAGACAATCC+AGG | 0.573091 | 7_1:-67218234 | Msa1032300:intron |
| GGTAGAGAAGAGTGACGGAG+TGG | 0.573405 | 7_1:+67219885 | None:intergenic |
| AGTTTGATATCCAAAATGCT+TGG | 0.575054 | 7_1:+67218082 | None:intergenic |
| GAGATATGGGAGGATACAAT+GGG | 0.579255 | 7_1:-67218867 | Msa1032300:CDS |
| TATCTGAATAAAGTTACAGA+TGG | 0.581662 | 7_1:-67219634 | Msa1032300:CDS |
| CTCTTCTCTACCACCAGAGA+AGG | 0.585995 | 7_1:-67219874 | Msa1032300:CDS |
| TGACGGAGTGGAGACGGTGG+CGG | 0.598117 | 7_1:+67219897 | None:intergenic |
| TTGAAGCTATTGAAATGGCA+AGG | 0.601957 | 7_1:-67217738 | Msa1032300:CDS |
| GTGGTGAAAGGACGCGAAGG+AGG | 0.602722 | 7_1:+67219964 | None:intergenic |
| ACTTTATTCAGATATATCAT+CGG | 0.603173 | 7_1:+67219643 | None:intergenic |
| CTATCCTTGACACTTCTGCA+AGG | 0.605345 | 7_1:+67219571 | None:intergenic |
| GGAACCTTGCAGAAGTGTCA+AGG | 0.610247 | 7_1:-67219575 | Msa1032300:CDS |
| TCGTTGCGGCAACAAAAGCA+AGG | 0.615870 | 7_1:+67219247 | None:intergenic |
| GGCGTCAAGTCCTTCTCTGG+TGG | 0.626862 | 7_1:+67219864 | None:intergenic |
| CAGGCCCTGTAGTTTCGAAG+TGG | 0.631210 | 7_1:+67218889 | None:intergenic |
| AAACATGTAAGCATTGGGTG+TGG | 0.635335 | 7_1:+67219077 | None:intergenic |
| TGAGTGGTGAAAGGACGCGA+AGG | 0.638903 | 7_1:+67219961 | None:intergenic |
| GTTTAATTAGGTGGTCGGGG+TGG | 0.642590 | 7_1:-67218274 | Msa1032300:intron |
| ACTGCTTGATGAAGTCGTCA+AGG | 0.643890 | 7_1:-67218062 | Msa1032300:intron |
| TTAGCTGATGCTGAAGAGAG+TGG | 0.644083 | 7_1:-67219451 | Msa1032300:CDS |
| GAGTGACGGAGTGGAGACGG+TGG | 0.648563 | 7_1:+67219894 | None:intergenic |
| TGATAACAGGAATAATACAA+AGG | 0.649016 | 7_1:-67219046 | Msa1032300:intron |
| CAGTTTATAACCCTTCGTTG+CGG | 0.649465 | 7_1:+67219233 | None:intergenic |
| CATTGCCGAAGATGTCACTC+AGG | 0.650049 | 7_1:-67219836 | Msa1032300:intron |
| AGATCCACTTCGAAACTACA+GGG | 0.651275 | 7_1:-67218893 | Msa1032300:CDS |
| CTGGTGGTAGAGAAGAGTGA+CGG | 0.669365 | 7_1:+67219880 | None:intergenic |
| GGCGGAAACGGATGTTACGG+TGG | 0.687677 | 7_1:+67219935 | None:intergenic |
| GATGTTACGGTGGAATTGAG+TGG | 0.695918 | 7_1:+67219945 | None:intergenic |
| GTTGCTGCTATTGGAACTGG+CGG | 0.697744 | 7_1:-67218828 | Msa1032300:CDS |
| CGGTTGCGGAAATTGTTCGG+CGG | 0.700758 | 7_1:+67219917 | None:intergenic |
| TACAGGGCCTGAGATATGGG+AGG | 0.706408 | 7_1:-67218877 | Msa1032300:CDS |
| AGAGTGGAGCAATTTCTCCG+GGG | 0.772818 | 7_1:-67219435 | Msa1032300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATGAATAAAAAAAAAAA+AGG | + | chr7_1:67218194-67218213 | None:intergenic | 10.0% |
| !! | CAAATGAATAAAAAAAAAAA+AGG | + | chr7_1:67218194-67218213 | None:intergenic | 10.0% |
| !!! | ATACCATAAAATTTAAAACA+CGG | + | chr7_1:67218735-67218754 | None:intergenic | 15.0% |
| !! | AATGATGAACAAAAAAATAA+AGG | - | chr7_1:67218935-67218954 | Msa1032300:intron | 15.0% |
| !!! | AATTTCTTTTAATACCAATA+AGG | + | chr7_1:67219074-67219093 | None:intergenic | 15.0% |
| !! | TTGTCATATATTGTTTAATT+AGG | - | chr7_1:67219424-67219443 | Msa1032300:intron | 15.0% |
| !!! | TGAAGTTAAAATTTTATTTC+TGG | - | chr7_1:67219701-67219720 | Msa1032300:intron | 15.0% |
| !!! | ATACCATAAAATTTAAAACA+CGG | + | chr7_1:67218735-67218754 | None:intergenic | 15.0% |
| !! | AATGATGAACAAAAAAATAA+AGG | - | chr7_1:67218935-67218954 | Msa1032300:intron | 15.0% |
| !!! | AATTTCTTTTAATACCAATA+AGG | + | chr7_1:67219074-67219093 | None:intergenic | 15.0% |
| !! | TTGTCATATATTGTTTAATT+AGG | - | chr7_1:67219424-67219443 | Msa1032300:intron | 15.0% |
| !!! | TGAAGTTAAAATTTTATTTC+TGG | - | chr7_1:67219701-67219720 | Msa1032300:intron | 15.0% |
| !! | TCATATACATTTGAAAATGT+TGG | - | chr7_1:67217999-67218018 | Msa1032300:intron | 20.0% |
| !! | ACTTTATTCAGATATATCAT+CGG | + | chr7_1:67218070-67218089 | None:intergenic | 20.0% |
| !!! | TGTAATGATTTTTTTAAAGC+AGG | - | chr7_1:67218351-67218370 | Msa1032300:intron | 20.0% |
| !! | AATAACATAATGCATATCAA+AGG | + | chr7_1:67218971-67218990 | None:intergenic | 20.0% |
| !! | AAATTGAATCATATACTCAT+TGG | - | chr7_1:67218993-67219012 | Msa1032300:intron | 20.0% |
| !! | TGAAGACAATAAAATAGATA+AGG | + | chr7_1:67219390-67219409 | None:intergenic | 20.0% |
| !! | ATATGACAAAATTTAATGCT+AGG | + | chr7_1:67219413-67219432 | None:intergenic | 20.0% |
| !! | TCATATATTGTTTAATTAGG+TGG | - | chr7_1:67219427-67219446 | Msa1032300:intron | 20.0% |
| !!! | ATCTTTTGTCTTAATTATTG+AGG | - | chr7_1:67219890-67219909 | Msa1032300:CDS | 20.0% |
| !! | TCATATACATTTGAAAATGT+TGG | - | chr7_1:67217999-67218018 | Msa1032300:intron | 20.0% |
| !! | ACTTTATTCAGATATATCAT+CGG | + | chr7_1:67218070-67218089 | None:intergenic | 20.0% |
| !!! | TGTAATGATTTTTTTAAAGC+AGG | - | chr7_1:67218351-67218370 | Msa1032300:intron | 20.0% |
| !! | AATAACATAATGCATATCAA+AGG | + | chr7_1:67218971-67218990 | None:intergenic | 20.0% |
| !! | AAATTGAATCATATACTCAT+TGG | - | chr7_1:67218993-67219012 | Msa1032300:intron | 20.0% |
| !! | TGAAGACAATAAAATAGATA+AGG | + | chr7_1:67219390-67219409 | None:intergenic | 20.0% |
| !! | ATATGACAAAATTTAATGCT+AGG | + | chr7_1:67219413-67219432 | None:intergenic | 20.0% |
| !! | TCATATATTGTTTAATTAGG+TGG | - | chr7_1:67219427-67219446 | Msa1032300:intron | 20.0% |
| !!! | ATCTTTTGTCTTAATTATTG+AGG | - | chr7_1:67219890-67219909 | Msa1032300:CDS | 20.0% |
| ! | TATCTGAATAAAGTTACAGA+TGG | - | chr7_1:67218076-67218095 | Msa1032300:CDS | 25.0% |
| !! | ACTGTTTAAAATGTCAGAAT+TGG | - | chr7_1:67218226-67218245 | Msa1032300:intron | 25.0% |
| !!! | GATTTTTTTAAAGCAGGTTA+CGG | - | chr7_1:67218357-67218376 | Msa1032300:intron | 25.0% |
| ! | TGATAACAGGAATAATACAA+AGG | - | chr7_1:67218664-67218683 | Msa1032300:intron | 25.0% |
| ! | TTAAAACACGGTGATTAAAA+AGG | + | chr7_1:67218723-67218742 | None:intergenic | 25.0% |
| !!! | TCACCGTGTTTTAAATTTTA+TGG | - | chr7_1:67218729-67218748 | Msa1032300:intron | 25.0% |
| !!! | AATGGGTAATGTTGATTTAT+TGG | - | chr7_1:67218860-67218879 | Msa1032300:CDS | 25.0% |
| !! | TTTTAATACCAATAAGGTGA+AGG | + | chr7_1:67219068-67219087 | None:intergenic | 25.0% |
| ! | GAAATCTATTACACAAGTTA+TGG | + | chr7_1:67219124-67219143 | None:intergenic | 25.0% |
| ! | AAAACATTCTGGTCAATTTA+TGG | + | chr7_1:67219274-67219293 | None:intergenic | 25.0% |
| !! | TTACATTTAAAGTGAAAGTC+TGG | - | chr7_1:67219364-67219383 | Msa1032300:intron | 25.0% |
| ! | ATATTGTTTAATTAGGTGGT+CGG | - | chr7_1:67219431-67219450 | Msa1032300:intron | 25.0% |
| !!! | ATTTTAACTTCACAACAGAA+GGG | + | chr7_1:67219693-67219712 | None:intergenic | 25.0% |
| !!! | AATTTTAACTTCACAACAGA+AGG | + | chr7_1:67219694-67219713 | None:intergenic | 25.0% |
| !!! | TCATTATTTTAGCTGATACT+TGG | - | chr7_1:67219761-67219780 | Msa1032300:intron | 25.0% |
| ! | CTTTGCATGATAAATTATCT+TGG | - | chr7_1:67219924-67219943 | Msa1032300:CDS | 25.0% |
| ! | TATCTGAATAAAGTTACAGA+TGG | - | chr7_1:67218076-67218095 | Msa1032300:CDS | 25.0% |
| !! | ACTGTTTAAAATGTCAGAAT+TGG | - | chr7_1:67218226-67218245 | Msa1032300:intron | 25.0% |
| !!! | GATTTTTTTAAAGCAGGTTA+CGG | - | chr7_1:67218357-67218376 | Msa1032300:intron | 25.0% |
| ! | TGATAACAGGAATAATACAA+AGG | - | chr7_1:67218664-67218683 | Msa1032300:intron | 25.0% |
| ! | TTAAAACACGGTGATTAAAA+AGG | + | chr7_1:67218723-67218742 | None:intergenic | 25.0% |
| !!! | TCACCGTGTTTTAAATTTTA+TGG | - | chr7_1:67218729-67218748 | Msa1032300:intron | 25.0% |
| !!! | AATGGGTAATGTTGATTTAT+TGG | - | chr7_1:67218860-67218879 | Msa1032300:CDS | 25.0% |
| !! | TTTTAATACCAATAAGGTGA+AGG | + | chr7_1:67219068-67219087 | None:intergenic | 25.0% |
| ! | GAAATCTATTACACAAGTTA+TGG | + | chr7_1:67219124-67219143 | None:intergenic | 25.0% |
| ! | AAAACATTCTGGTCAATTTA+TGG | + | chr7_1:67219274-67219293 | None:intergenic | 25.0% |
| !! | TTACATTTAAAGTGAAAGTC+TGG | - | chr7_1:67219364-67219383 | Msa1032300:intron | 25.0% |
| ! | ATATTGTTTAATTAGGTGGT+CGG | - | chr7_1:67219431-67219450 | Msa1032300:intron | 25.0% |
| !!! | ATTTTAACTTCACAACAGAA+GGG | + | chr7_1:67219693-67219712 | None:intergenic | 25.0% |
| !!! | AATTTTAACTTCACAACAGA+AGG | + | chr7_1:67219694-67219713 | None:intergenic | 25.0% |
| !!! | TCATTATTTTAGCTGATACT+TGG | - | chr7_1:67219761-67219780 | Msa1032300:intron | 25.0% |
| ! | CTTTGCATGATAAATTATCT+TGG | - | chr7_1:67219924-67219943 | Msa1032300:CDS | 25.0% |
| AATGAATGAATGCAGTTGAT+TGG | - | chr7_1:67218037-67218056 | Msa1032300:intron | 30.0% | |
| ATGGCTTGATATAGAGAATT+AGG | + | chr7_1:67219028-67219047 | None:intergenic | 30.0% | |
| GGTTATGGAATTTGAATTCA+TGG | + | chr7_1:67219047-67219066 | None:intergenic | 30.0% | |
| TTTCTCATATTTAGTGCTTG+AGG | - | chr7_1:67219140-67219159 | Msa1032300:CDS | 30.0% | |
| !!! | TTTTTTTCCTTTGCTAACAC+AGG | + | chr7_1:67219190-67219209 | None:intergenic | 30.0% |
| GTGTTAGCAAAGGAAAAAAA+AGG | - | chr7_1:67219190-67219209 | Msa1032300:CDS | 30.0% | |
| GCTAGAATAAGCTATACTAA+TGG | + | chr7_1:67219236-67219255 | None:intergenic | 30.0% | |
| CAAGTCTTACTAAAACATTC+TGG | + | chr7_1:67219285-67219304 | None:intergenic | 30.0% | |
| TATTGTTTAATTAGGTGGTC+GGG | - | chr7_1:67219432-67219451 | Msa1032300:CDS | 30.0% | |
| TATCGTAAAAGATTCATACC+TGG | + | chr7_1:67219497-67219516 | None:intergenic | 30.0% | |
| ATAAGAAAATCTGTTTCAGG+TGG | + | chr7_1:67219567-67219586 | None:intergenic | 30.0% | |
| CTGATAAGAAAATCTGTTTC+AGG | + | chr7_1:67219570-67219589 | None:intergenic | 30.0% | |
| AGTTTGATATCCAAAATGCT+TGG | + | chr7_1:67219631-67219650 | None:intergenic | 30.0% | |
| !!! | TTTTAACTTCACAACAGAAG+GGG | + | chr7_1:67219692-67219711 | None:intergenic | 30.0% |
| TAGTTATTTAATCGTTGCAC+TGG | - | chr7_1:67219825-67219844 | Msa1032300:intron | 30.0% | |
| ATCTTGGCATATGAAATTAC+AGG | - | chr7_1:67219940-67219959 | Msa1032300:CDS | 30.0% | |
| CATTTCAATAGCTTCAACAT+TGG | + | chr7_1:67219969-67219988 | None:intergenic | 30.0% | |
| CAATGTTGAAGCTATTGAAA+TGG | - | chr7_1:67219967-67219986 | Msa1032300:CDS | 30.0% | |
| AATGAATGAATGCAGTTGAT+TGG | - | chr7_1:67218037-67218056 | Msa1032300:intron | 30.0% | |
| ATGGCTTGATATAGAGAATT+AGG | + | chr7_1:67219028-67219047 | None:intergenic | 30.0% | |
| GGTTATGGAATTTGAATTCA+TGG | + | chr7_1:67219047-67219066 | None:intergenic | 30.0% | |
| TTTCTCATATTTAGTGCTTG+AGG | - | chr7_1:67219140-67219159 | Msa1032300:CDS | 30.0% | |
| !!! | TTTTTTTCCTTTGCTAACAC+AGG | + | chr7_1:67219190-67219209 | None:intergenic | 30.0% |
| GTGTTAGCAAAGGAAAAAAA+AGG | - | chr7_1:67219190-67219209 | Msa1032300:CDS | 30.0% | |
| GCTAGAATAAGCTATACTAA+TGG | + | chr7_1:67219236-67219255 | None:intergenic | 30.0% | |
| CAAGTCTTACTAAAACATTC+TGG | + | chr7_1:67219285-67219304 | None:intergenic | 30.0% | |
| TATTGTTTAATTAGGTGGTC+GGG | - | chr7_1:67219432-67219451 | Msa1032300:CDS | 30.0% | |
| TATCGTAAAAGATTCATACC+TGG | + | chr7_1:67219497-67219516 | None:intergenic | 30.0% | |
| ATAAGAAAATCTGTTTCAGG+TGG | + | chr7_1:67219567-67219586 | None:intergenic | 30.0% | |
| CTGATAAGAAAATCTGTTTC+AGG | + | chr7_1:67219570-67219589 | None:intergenic | 30.0% | |
| AGTTTGATATCCAAAATGCT+TGG | + | chr7_1:67219631-67219650 | None:intergenic | 30.0% | |
| !!! | TTTTAACTTCACAACAGAAG+GGG | + | chr7_1:67219692-67219711 | None:intergenic | 30.0% |
| TAGTTATTTAATCGTTGCAC+TGG | - | chr7_1:67219825-67219844 | Msa1032300:intron | 30.0% | |
| ATCTTGGCATATGAAATTAC+AGG | - | chr7_1:67219940-67219959 | Msa1032300:CDS | 30.0% | |
| CATTTCAATAGCTTCAACAT+TGG | + | chr7_1:67219969-67219988 | None:intergenic | 30.0% | |
| CAATGTTGAAGCTATTGAAA+TGG | - | chr7_1:67219967-67219986 | Msa1032300:CDS | 30.0% | |
| ! | GTATGTTGTGAAGGATTTTG+TGG | - | chr7_1:67218301-67218320 | Msa1032300:intron | 35.0% |
| !!! | GTTTTAGTTGAACCTACAAC+TGG | - | chr7_1:67218425-67218444 | Msa1032300:intron | 35.0% |
| TGAACCTACAACTGGAAATA+CGG | - | chr7_1:67218433-67218452 | Msa1032300:intron | 35.0% | |
| CTCTCAATATTAACAGAAGC+AGG | + | chr7_1:67218515-67218534 | None:intergenic | 35.0% | |
| CTGCTTCTGTTAATATTGAG+AGG | - | chr7_1:67218513-67218532 | Msa1032300:intron | 35.0% | |
| ! | AGAATCCTTTTACGCACATT+TGG | - | chr7_1:67218536-67218555 | Msa1032300:intron | 35.0% |
| TGTCGAAACATGTAAGCATT+GGG | + | chr7_1:67218641-67218660 | None:intergenic | 35.0% | |
| ! | TGTTTCGACAGTTTGATAAC+AGG | - | chr7_1:67218651-67218670 | Msa1032300:intron | 35.0% |
| ! | GATTTATTGGTTGCTGCTAT+TGG | - | chr7_1:67218873-67218892 | Msa1032300:CDS | 35.0% |
| TTCCATAACCTTCACCTTAT+TGG | - | chr7_1:67219057-67219076 | Msa1032300:CDS | 35.0% | |
| TACCAATAAGGTGAAGGTTA+TGG | + | chr7_1:67219062-67219081 | None:intergenic | 35.0% | |
| TATTTAGTGCTTGAGGAACT+TGG | - | chr7_1:67219147-67219166 | Msa1032300:CDS | 35.0% | |
| TTGTATTCCTGTGTTAGCAA+AGG | - | chr7_1:67219180-67219199 | Msa1032300:CDS | 35.0% | |
| AGGAAAAAAAAGGATCCGAA+AGG | - | chr7_1:67219200-67219219 | Msa1032300:CDS | 35.0% | |
| AAAAAAAGGATCCGAAAGGA+AGG | - | chr7_1:67219204-67219223 | Msa1032300:CDS | 35.0% | |
| ATTGTTTAATTAGGTGGTCG+GGG | - | chr7_1:67219433-67219452 | Msa1032300:CDS | 35.0% | |
| GAGATTATACTTCTATCTGC+AGG | + | chr7_1:67219464-67219483 | None:intergenic | 35.0% | |
| ! | GCAGATAGAAGTATAATCTC+AGG | - | chr7_1:67219464-67219483 | Msa1032300:CDS | 35.0% |
| ! | TTATCAGCTGTTGACTGTAT+TGG | - | chr7_1:67219583-67219602 | Msa1032300:CDS | 35.0% |
| ! | TATCAGCTGTTGACTGTATT+GGG | - | chr7_1:67219584-67219603 | Msa1032300:CDS | 35.0% |
| ! | AGGTTTCATACCAAGCATTT+TGG | - | chr7_1:67219618-67219637 | Msa1032300:CDS | 35.0% |
| AAACAAGAATAAGCCCTAAC+AGG | + | chr7_1:67219736-67219755 | None:intergenic | 35.0% | |
| TTATTTAATCGTTGCACTGG+TGG | - | chr7_1:67219828-67219847 | Msa1032300:intron | 35.0% | |
| TTGAAGCTATTGAAATGGCA+AGG | - | chr7_1:67219972-67219991 | Msa1032300:CDS | 35.0% | |
| ! | GTATGTTGTGAAGGATTTTG+TGG | - | chr7_1:67218301-67218320 | Msa1032300:intron | 35.0% |
| !!! | GTTTTAGTTGAACCTACAAC+TGG | - | chr7_1:67218425-67218444 | Msa1032300:intron | 35.0% |
| TGAACCTACAACTGGAAATA+CGG | - | chr7_1:67218433-67218452 | Msa1032300:intron | 35.0% | |
| CTCTCAATATTAACAGAAGC+AGG | + | chr7_1:67218515-67218534 | None:intergenic | 35.0% | |
| CTGCTTCTGTTAATATTGAG+AGG | - | chr7_1:67218513-67218532 | Msa1032300:intron | 35.0% | |
| ! | AGAATCCTTTTACGCACATT+TGG | - | chr7_1:67218536-67218555 | Msa1032300:intron | 35.0% |
| TGTCGAAACATGTAAGCATT+GGG | + | chr7_1:67218641-67218660 | None:intergenic | 35.0% | |
| ! | TGTTTCGACAGTTTGATAAC+AGG | - | chr7_1:67218651-67218670 | Msa1032300:intron | 35.0% |
| ! | GATTTATTGGTTGCTGCTAT+TGG | - | chr7_1:67218873-67218892 | Msa1032300:CDS | 35.0% |
| TTCCATAACCTTCACCTTAT+TGG | - | chr7_1:67219057-67219076 | Msa1032300:CDS | 35.0% | |
| TACCAATAAGGTGAAGGTTA+TGG | + | chr7_1:67219062-67219081 | None:intergenic | 35.0% | |
| TATTTAGTGCTTGAGGAACT+TGG | - | chr7_1:67219147-67219166 | Msa1032300:CDS | 35.0% | |
| TTGTATTCCTGTGTTAGCAA+AGG | - | chr7_1:67219180-67219199 | Msa1032300:CDS | 35.0% | |
| AGGAAAAAAAAGGATCCGAA+AGG | - | chr7_1:67219200-67219219 | Msa1032300:CDS | 35.0% | |
| AAAAAAAGGATCCGAAAGGA+AGG | - | chr7_1:67219204-67219223 | Msa1032300:CDS | 35.0% | |
| ATTGTTTAATTAGGTGGTCG+GGG | - | chr7_1:67219433-67219452 | Msa1032300:CDS | 35.0% | |
| GAGATTATACTTCTATCTGC+AGG | + | chr7_1:67219464-67219483 | None:intergenic | 35.0% | |
| ! | GCAGATAGAAGTATAATCTC+AGG | - | chr7_1:67219464-67219483 | Msa1032300:CDS | 35.0% |
| ! | TTATCAGCTGTTGACTGTAT+TGG | - | chr7_1:67219583-67219602 | Msa1032300:CDS | 35.0% |
| ! | TATCAGCTGTTGACTGTATT+GGG | - | chr7_1:67219584-67219603 | Msa1032300:CDS | 35.0% |
| ! | AGGTTTCATACCAAGCATTT+TGG | - | chr7_1:67219618-67219637 | Msa1032300:CDS | 35.0% |
| AAACAAGAATAAGCCCTAAC+AGG | + | chr7_1:67219736-67219755 | None:intergenic | 35.0% | |
| TTATTTAATCGTTGCACTGG+TGG | - | chr7_1:67219828-67219847 | Msa1032300:intron | 35.0% | |
| TTGAAGCTATTGAAATGGCA+AGG | - | chr7_1:67219972-67219991 | Msa1032300:CDS | 35.0% | |
| GGAGGAAGAATTGTTGTAGA+AGG | + | chr7_1:67217731-67217750 | None:intergenic | 40.0% | |
| GACATCTTCGGCAATGTTAA+CGG | + | chr7_1:67217870-67217889 | None:intergenic | 40.0% | |
| AAGTACCTGAGTGACATCTT+CGG | + | chr7_1:67217882-67217901 | None:intergenic | 40.0% | |
| GCACTTACACTTCTGATTGA+AGG | - | chr7_1:67217935-67217954 | Msa1032300:intron | 40.0% | |
| TTCTGATTGAAGGCTTGTCT+AGG | - | chr7_1:67217945-67217964 | Msa1032300:intron | 40.0% | |
| TGCTGCAAAACTTGAATCCA+TGG | - | chr7_1:67218114-67218133 | Msa1032300:intron | 40.0% | |
| TTAAAGCAGGTTACGGATCT+TGG | - | chr7_1:67218364-67218383 | Msa1032300:intron | 40.0% | |
| GAACCTACAACTGGAAATAC+GGG | - | chr7_1:67218434-67218453 | Msa1032300:intron | 40.0% | |
| CAGTTTATAACCCTTCGTTG+CGG | + | chr7_1:67218480-67218499 | None:intergenic | 40.0% | |
| !!! | AGAGGTTGTTTTGACGAATG+CGG | - | chr7_1:67218562-67218581 | Msa1032300:intron | 40.0% |
| !! | AAACATGTAAGCATTGGGTG+TGG | + | chr7_1:67218636-67218655 | None:intergenic | 40.0% |
| CTGTCGAAACATGTAAGCAT+TGG | + | chr7_1:67218642-67218661 | None:intergenic | 40.0% | |
| CACGGTGATTAAAAAGGTGA+AGG | + | chr7_1:67218717-67218736 | None:intergenic | 40.0% | |
| AGATCCACTTCGAAACTACA+GGG | - | chr7_1:67218817-67218836 | Msa1032300:CDS | 40.0% | |
| ATTGTATCCTCCCATATCTC+AGG | + | chr7_1:67218843-67218862 | None:intergenic | 40.0% | |
| TGAGATATGGGAGGATACAA+TGG | - | chr7_1:67218842-67218861 | Msa1032300:CDS | 40.0% | |
| GAGATATGGGAGGATACAAT+GGG | - | chr7_1:67218843-67218862 | Msa1032300:CDS | 40.0% | |
| AATGGTCTATGCCTTCCTTT+CGG | + | chr7_1:67219218-67219237 | None:intergenic | 40.0% | |
| GAGACATACCTGAATGTAGT+CGG | - | chr7_1:67219311-67219330 | Msa1032300:intron | 40.0% | |
| ATAATCTCAGGAGACAATCC+AGG | - | chr7_1:67219476-67219495 | Msa1032300:intron | 40.0% | |
| ! | CTGTTTCAGGTGGAAATGAA+GGG | + | chr7_1:67219557-67219576 | None:intergenic | 40.0% |
| ! | TCTGTTTCAGGTGGAAATGA+AGG | + | chr7_1:67219558-67219577 | None:intergenic | 40.0% |
| ! | ATCAGCTGTTGACTGTATTG+GGG | - | chr7_1:67219585-67219604 | Msa1032300:CDS | 40.0% |
| !! | TGTATTGGGGAATTTGTTGC+AGG | - | chr7_1:67219598-67219617 | Msa1032300:CDS | 40.0% |
| GATGAAGTCGTCAAGGTAAA+CGG | - | chr7_1:67219655-67219674 | Msa1032300:CDS | 40.0% | |
| TCTGGTCATACAAACCTGTT+AGG | - | chr7_1:67219719-67219738 | Msa1032300:intron | 40.0% | |
| CTGGTCATACAAACCTGTTA+GGG | - | chr7_1:67219720-67219739 | Msa1032300:intron | 40.0% | |
| AATGGCAAGGAGATTAGCAT+TGG | - | chr7_1:67219985-67220004 | Msa1032300:CDS | 40.0% | |
| ! | AGGAGATTAGCATTGGAAGA+AGG | - | chr7_1:67219992-67220011 | Msa1032300:CDS | 40.0% |
| ! | AGCATTGGAAGAAGGATTAC+TGG | - | chr7_1:67220000-67220019 | Msa1032300:CDS | 40.0% |
| GGAGGAAGAATTGTTGTAGA+AGG | + | chr7_1:67217731-67217750 | None:intergenic | 40.0% | |
| GACATCTTCGGCAATGTTAA+CGG | + | chr7_1:67217870-67217889 | None:intergenic | 40.0% | |
| AAGTACCTGAGTGACATCTT+CGG | + | chr7_1:67217882-67217901 | None:intergenic | 40.0% | |
| GCACTTACACTTCTGATTGA+AGG | - | chr7_1:67217935-67217954 | Msa1032300:intron | 40.0% | |
| TTCTGATTGAAGGCTTGTCT+AGG | - | chr7_1:67217945-67217964 | Msa1032300:intron | 40.0% | |
| TGCTGCAAAACTTGAATCCA+TGG | - | chr7_1:67218114-67218133 | Msa1032300:intron | 40.0% | |
| TTAAAGCAGGTTACGGATCT+TGG | - | chr7_1:67218364-67218383 | Msa1032300:intron | 40.0% | |
| GAACCTACAACTGGAAATAC+GGG | - | chr7_1:67218434-67218453 | Msa1032300:intron | 40.0% | |
| CAGTTTATAACCCTTCGTTG+CGG | + | chr7_1:67218480-67218499 | None:intergenic | 40.0% | |
| !!! | AGAGGTTGTTTTGACGAATG+CGG | - | chr7_1:67218562-67218581 | Msa1032300:intron | 40.0% |
| !! | AAACATGTAAGCATTGGGTG+TGG | + | chr7_1:67218636-67218655 | None:intergenic | 40.0% |
| CTGTCGAAACATGTAAGCAT+TGG | + | chr7_1:67218642-67218661 | None:intergenic | 40.0% | |
| CACGGTGATTAAAAAGGTGA+AGG | + | chr7_1:67218717-67218736 | None:intergenic | 40.0% | |
| AGATCCACTTCGAAACTACA+GGG | - | chr7_1:67218817-67218836 | Msa1032300:CDS | 40.0% | |
| ATTGTATCCTCCCATATCTC+AGG | + | chr7_1:67218843-67218862 | None:intergenic | 40.0% | |
| TGAGATATGGGAGGATACAA+TGG | - | chr7_1:67218842-67218861 | Msa1032300:CDS | 40.0% | |
| GAGATATGGGAGGATACAAT+GGG | - | chr7_1:67218843-67218862 | Msa1032300:CDS | 40.0% | |
| AATGGTCTATGCCTTCCTTT+CGG | + | chr7_1:67219218-67219237 | None:intergenic | 40.0% | |
| GAGACATACCTGAATGTAGT+CGG | - | chr7_1:67219311-67219330 | Msa1032300:intron | 40.0% | |
| ATAATCTCAGGAGACAATCC+AGG | - | chr7_1:67219476-67219495 | Msa1032300:intron | 40.0% | |
| ! | CTGTTTCAGGTGGAAATGAA+GGG | + | chr7_1:67219557-67219576 | None:intergenic | 40.0% |
| ! | TCTGTTTCAGGTGGAAATGA+AGG | + | chr7_1:67219558-67219577 | None:intergenic | 40.0% |
| ! | ATCAGCTGTTGACTGTATTG+GGG | - | chr7_1:67219585-67219604 | Msa1032300:CDS | 40.0% |
| !! | TGTATTGGGGAATTTGTTGC+AGG | - | chr7_1:67219598-67219617 | Msa1032300:CDS | 40.0% |
| GATGAAGTCGTCAAGGTAAA+CGG | - | chr7_1:67219655-67219674 | Msa1032300:CDS | 40.0% | |
| TCTGGTCATACAAACCTGTT+AGG | - | chr7_1:67219719-67219738 | Msa1032300:intron | 40.0% | |
| CTGGTCATACAAACCTGTTA+GGG | - | chr7_1:67219720-67219739 | Msa1032300:intron | 40.0% | |
| AATGGCAAGGAGATTAGCAT+TGG | - | chr7_1:67219985-67220004 | Msa1032300:CDS | 40.0% | |
| ! | AGGAGATTAGCATTGGAAGA+AGG | - | chr7_1:67219992-67220011 | Msa1032300:CDS | 40.0% |
| ! | AGCATTGGAAGAAGGATTAC+TGG | - | chr7_1:67220000-67220019 | Msa1032300:CDS | 40.0% |
| GATGTTACGGTGGAATTGAG+TGG | + | chr7_1:67217768-67217787 | None:intergenic | 45.0% | |
| CTATCCTTGACACTTCTGCA+AGG | + | chr7_1:67218142-67218161 | None:intergenic | 45.0% | |
| !! | CTTGCAGAAGTGTCAAGGAT+AGG | - | chr7_1:67218140-67218159 | Msa1032300:intron | 45.0% |
| TTAGCTGATGCTGAAGAGAG+TGG | - | chr7_1:67218259-67218278 | Msa1032300:CDS | 45.0% | |
| AGAGAGTGGAGCAATTTCTC+CGG | - | chr7_1:67218273-67218292 | Msa1032300:intron | 45.0% | |
| GTCTGCACAAATACACGATC+AGG | + | chr7_1:67218404-67218423 | None:intergenic | 45.0% | |
| AGTCCCGTATTTCCAGTTGT+AGG | + | chr7_1:67218440-67218459 | None:intergenic | 45.0% | |
| ACAACTGGAAATACGGGACT+TGG | - | chr7_1:67218440-67218459 | Msa1032300:intron | 45.0% | |
| CTGCACCAAATGTGCGTAAA+AGG | + | chr7_1:67218544-67218563 | None:intergenic | 45.0% | |
| !! | TTTACGCACATTTGGTGCAG+AGG | - | chr7_1:67218544-67218563 | Msa1032300:intron | 45.0% |
| !!! | TGTTTTGACGAATGCGGAGA+AGG | - | chr7_1:67218568-67218587 | Msa1032300:intron | 45.0% |
| !! | GTTTTGACGAATGCGGAGAA+GGG | - | chr7_1:67218569-67218588 | Msa1032300:intron | 45.0% |
| ! | TTTTGACGAATGCGGAGAAG+GGG | - | chr7_1:67218570-67218589 | Msa1032300:intron | 45.0% |
| GGTGAAGGTCTCATATGAGA+TGG | + | chr7_1:67218702-67218721 | None:intergenic | 45.0% | |
| CAGATCCACTTCGAAACTAC+AGG | - | chr7_1:67218816-67218835 | Msa1032300:CDS | 45.0% | |
| AAACTACAGGGCCTGAGATA+TGG | - | chr7_1:67218829-67218848 | Msa1032300:CDS | 45.0% | |
| AACTACAGGGCCTGAGATAT+GGG | - | chr7_1:67218830-67218849 | Msa1032300:CDS | 45.0% | |
| TTGGTTGCTGCTATTGGAAC+TGG | - | chr7_1:67218879-67218898 | Msa1032300:CDS | 45.0% | |
| ! | AACAGATGCCGACTACATTC+AGG | + | chr7_1:67219322-67219341 | None:intergenic | 45.0% |
| ACTGCTTGATGAAGTCGTCA+AGG | - | chr7_1:67219648-67219667 | Msa1032300:CDS | 45.0% | |
| GATGTTACGGTGGAATTGAG+TGG | + | chr7_1:67217768-67217787 | None:intergenic | 45.0% | |
| CTATCCTTGACACTTCTGCA+AGG | + | chr7_1:67218142-67218161 | None:intergenic | 45.0% | |
| !! | CTTGCAGAAGTGTCAAGGAT+AGG | - | chr7_1:67218140-67218159 | Msa1032300:intron | 45.0% |
| TTAGCTGATGCTGAAGAGAG+TGG | - | chr7_1:67218259-67218278 | Msa1032300:CDS | 45.0% | |
| AGAGAGTGGAGCAATTTCTC+CGG | - | chr7_1:67218273-67218292 | Msa1032300:intron | 45.0% | |
| GTCTGCACAAATACACGATC+AGG | + | chr7_1:67218404-67218423 | None:intergenic | 45.0% | |
| AGTCCCGTATTTCCAGTTGT+AGG | + | chr7_1:67218440-67218459 | None:intergenic | 45.0% | |
| ACAACTGGAAATACGGGACT+TGG | - | chr7_1:67218440-67218459 | Msa1032300:intron | 45.0% | |
| CTGCACCAAATGTGCGTAAA+AGG | + | chr7_1:67218544-67218563 | None:intergenic | 45.0% | |
| !! | TTTACGCACATTTGGTGCAG+AGG | - | chr7_1:67218544-67218563 | Msa1032300:intron | 45.0% |
| !!! | TGTTTTGACGAATGCGGAGA+AGG | - | chr7_1:67218568-67218587 | Msa1032300:intron | 45.0% |
| !! | GTTTTGACGAATGCGGAGAA+GGG | - | chr7_1:67218569-67218588 | Msa1032300:intron | 45.0% |
| ! | TTTTGACGAATGCGGAGAAG+GGG | - | chr7_1:67218570-67218589 | Msa1032300:intron | 45.0% |
| GGTGAAGGTCTCATATGAGA+TGG | + | chr7_1:67218702-67218721 | None:intergenic | 45.0% | |
| CAGATCCACTTCGAAACTAC+AGG | - | chr7_1:67218816-67218835 | Msa1032300:CDS | 45.0% | |
| AAACTACAGGGCCTGAGATA+TGG | - | chr7_1:67218829-67218848 | Msa1032300:CDS | 45.0% | |
| AACTACAGGGCCTGAGATAT+GGG | - | chr7_1:67218830-67218849 | Msa1032300:CDS | 45.0% | |
| TTGGTTGCTGCTATTGGAAC+TGG | - | chr7_1:67218879-67218898 | Msa1032300:CDS | 45.0% | |
| ! | AACAGATGCCGACTACATTC+AGG | + | chr7_1:67219322-67219341 | None:intergenic | 45.0% |
| ACTGCTTGATGAAGTCGTCA+AGG | - | chr7_1:67219648-67219667 | Msa1032300:CDS | 45.0% | |
| CGGTGGAATTGAGTGGTGAA+AGG | + | chr7_1:67217761-67217780 | None:intergenic | 50.0% | |
| TTCGGCGGAAACGGATGTTA+CGG | + | chr7_1:67217781-67217800 | None:intergenic | 50.0% | |
| CGGAAATTGTTCGGCGGAAA+CGG | + | chr7_1:67217790-67217809 | None:intergenic | 50.0% | |
| TGGCGGTTGCGGAAATTGTT+CGG | + | chr7_1:67217799-67217818 | None:intergenic | 50.0% | |
| CTGGTGGTAGAGAAGAGTGA+CGG | + | chr7_1:67217833-67217852 | None:intergenic | 50.0% | |
| CTCTTCTCTACCACCAGAGA+AGG | - | chr7_1:67217836-67217855 | Msa1032300:intron | 50.0% | |
| CATTGCCGAAGATGTCACTC+AGG | - | chr7_1:67217874-67217893 | Msa1032300:intron | 50.0% | |
| GACACTTCTGCAAGGTTCCA+TGG | + | chr7_1:67218134-67218153 | None:intergenic | 50.0% | |
| !! | GGAACCTTGCAGAAGTGTCA+AGG | - | chr7_1:67218135-67218154 | Msa1032300:intron | 50.0% |
| GAGAGTGGAGCAATTTCTCC+GGG | - | chr7_1:67218274-67218293 | Msa1032300:intron | 50.0% | |
| AGAGTGGAGCAATTTCTCCG+GGG | - | chr7_1:67218275-67218294 | Msa1032300:intron | 50.0% | |
| CCTTCACAACATACCTTCCC+CGG | + | chr7_1:67218295-67218314 | None:intergenic | 50.0% | |
| TCGTTGCGGCAACAAAAGCA+AGG | + | chr7_1:67218466-67218485 | None:intergenic | 50.0% | |
| ! | TGCTTTTGTTGCCGCAACGA+AGG | - | chr7_1:67218466-67218485 | Msa1032300:intron | 50.0% |
| ! | GCTTTTGTTGCCGCAACGAA+GGG | - | chr7_1:67218467-67218486 | Msa1032300:intron | 50.0% |
| GTTGCTGCTATTGGAACTGG+CGG | - | chr7_1:67218882-67218901 | Msa1032300:CDS | 50.0% | |
| GTTTAATTAGGTGGTCGGGG+TGG | - | chr7_1:67219436-67219455 | Msa1032300:CDS | 50.0% | |
| CGGTGGAATTGAGTGGTGAA+AGG | + | chr7_1:67217761-67217780 | None:intergenic | 50.0% | |
| TTCGGCGGAAACGGATGTTA+CGG | + | chr7_1:67217781-67217800 | None:intergenic | 50.0% | |
| CGGAAATTGTTCGGCGGAAA+CGG | + | chr7_1:67217790-67217809 | None:intergenic | 50.0% | |
| TGGCGGTTGCGGAAATTGTT+CGG | + | chr7_1:67217799-67217818 | None:intergenic | 50.0% | |
| CTGGTGGTAGAGAAGAGTGA+CGG | + | chr7_1:67217833-67217852 | None:intergenic | 50.0% | |
| CTCTTCTCTACCACCAGAGA+AGG | - | chr7_1:67217836-67217855 | Msa1032300:intron | 50.0% | |
| CATTGCCGAAGATGTCACTC+AGG | - | chr7_1:67217874-67217893 | Msa1032300:intron | 50.0% | |
| GACACTTCTGCAAGGTTCCA+TGG | + | chr7_1:67218134-67218153 | None:intergenic | 50.0% | |
| !! | GGAACCTTGCAGAAGTGTCA+AGG | - | chr7_1:67218135-67218154 | Msa1032300:intron | 50.0% |
| GAGAGTGGAGCAATTTCTCC+GGG | - | chr7_1:67218274-67218293 | Msa1032300:intron | 50.0% | |
| AGAGTGGAGCAATTTCTCCG+GGG | - | chr7_1:67218275-67218294 | Msa1032300:intron | 50.0% | |
| CCTTCACAACATACCTTCCC+CGG | + | chr7_1:67218295-67218314 | None:intergenic | 50.0% | |
| TCGTTGCGGCAACAAAAGCA+AGG | + | chr7_1:67218466-67218485 | None:intergenic | 50.0% | |
| ! | TGCTTTTGTTGCCGCAACGA+AGG | - | chr7_1:67218466-67218485 | Msa1032300:intron | 50.0% |
| ! | GCTTTTGTTGCCGCAACGAA+GGG | - | chr7_1:67218467-67218486 | Msa1032300:intron | 50.0% |
| GTTGCTGCTATTGGAACTGG+CGG | - | chr7_1:67218882-67218901 | Msa1032300:CDS | 50.0% | |
| GTTTAATTAGGTGGTCGGGG+TGG | - | chr7_1:67219436-67219455 | Msa1032300:CDS | 50.0% | |
| TGAGTGGTGAAAGGACGCGA+AGG | + | chr7_1:67217752-67217771 | None:intergenic | 55.0% | |
| CGGTTGCGGAAATTGTTCGG+CGG | + | chr7_1:67217796-67217815 | None:intergenic | 55.0% | |
| ! | GAAGAGTGACGGAGTGGAGA+CGG | + | chr7_1:67217822-67217841 | None:intergenic | 55.0% |
| ! | GGTAGAGAAGAGTGACGGAG+TGG | + | chr7_1:67217828-67217847 | None:intergenic | 55.0% |
| AACGGCGTCAAGTCCTTCTC+TGG | + | chr7_1:67217852-67217871 | None:intergenic | 55.0% | |
| TGGAGCAATTTCTCCGGGGA+AGG | - | chr7_1:67218279-67218298 | Msa1032300:intron | 55.0% | |
| ! | CCGGGGAAGGTATGTTGTGA+AGG | - | chr7_1:67218292-67218311 | Msa1032300:intron | 55.0% |
| AATGCGGAGAAGGGGCTGAA+AGG | - | chr7_1:67218578-67218597 | Msa1032300:intron | 55.0% | |
| ATGCGGAGAAGGGGCTGAAA+GGG | - | chr7_1:67218579-67218598 | Msa1032300:intron | 55.0% | |
| CAGGCCCTGTAGTTTCGAAG+TGG | + | chr7_1:67218824-67218843 | None:intergenic | 55.0% | |
| TACAGGGCCTGAGATATGGG+AGG | - | chr7_1:67218833-67218852 | Msa1032300:CDS | 55.0% | |
| GGAACTGGCGGCACTATTAC+AGG | - | chr7_1:67218894-67218913 | Msa1032300:CDS | 55.0% | |
| TGAGTGGTGAAAGGACGCGA+AGG | + | chr7_1:67217752-67217771 | None:intergenic | 55.0% | |
| CGGTTGCGGAAATTGTTCGG+CGG | + | chr7_1:67217796-67217815 | None:intergenic | 55.0% | |
| ! | GAAGAGTGACGGAGTGGAGA+CGG | + | chr7_1:67217822-67217841 | None:intergenic | 55.0% |
| ! | GGTAGAGAAGAGTGACGGAG+TGG | + | chr7_1:67217828-67217847 | None:intergenic | 55.0% |
| AACGGCGTCAAGTCCTTCTC+TGG | + | chr7_1:67217852-67217871 | None:intergenic | 55.0% | |
| TGGAGCAATTTCTCCGGGGA+AGG | - | chr7_1:67218279-67218298 | Msa1032300:intron | 55.0% | |
| ! | CCGGGGAAGGTATGTTGTGA+AGG | - | chr7_1:67218292-67218311 | Msa1032300:intron | 55.0% |
| AATGCGGAGAAGGGGCTGAA+AGG | - | chr7_1:67218578-67218597 | Msa1032300:intron | 55.0% | |
| ATGCGGAGAAGGGGCTGAAA+GGG | - | chr7_1:67218579-67218598 | Msa1032300:intron | 55.0% | |
| CAGGCCCTGTAGTTTCGAAG+TGG | + | chr7_1:67218824-67218843 | None:intergenic | 55.0% | |
| TACAGGGCCTGAGATATGGG+AGG | - | chr7_1:67218833-67218852 | Msa1032300:CDS | 55.0% | |
| GGAACTGGCGGCACTATTAC+AGG | - | chr7_1:67218894-67218913 | Msa1032300:CDS | 55.0% | |
| GTGGTGAAAGGACGCGAAGG+AGG | + | chr7_1:67217749-67217768 | None:intergenic | 60.0% | |
| GGCGGAAACGGATGTTACGG+TGG | + | chr7_1:67217778-67217797 | None:intergenic | 60.0% | |
| GGCGTCAAGTCCTTCTCTGG+TGG | + | chr7_1:67217849-67217868 | None:intergenic | 60.0% | |
| TGCGGAGAAGGGGCTGAAAG+GGG | - | chr7_1:67218580-67218599 | Msa1032300:intron | 60.0% | |
| GGCGGCACTATTACAGGCAC+TGG | - | chr7_1:67218900-67218919 | Msa1032300:intron | 60.0% | |
| GTGGTGAAAGGACGCGAAGG+AGG | + | chr7_1:67217749-67217768 | None:intergenic | 60.0% | |
| GGCGGAAACGGATGTTACGG+TGG | + | chr7_1:67217778-67217797 | None:intergenic | 60.0% | |
| GGCGTCAAGTCCTTCTCTGG+TGG | + | chr7_1:67217849-67217868 | None:intergenic | 60.0% | |
| TGCGGAGAAGGGGCTGAAAG+GGG | - | chr7_1:67218580-67218599 | Msa1032300:intron | 60.0% | |
| GGCGGCACTATTACAGGCAC+TGG | - | chr7_1:67218900-67218919 | Msa1032300:intron | 60.0% | |
| ! | AGTGGAGACGGTGGCGGTTG+CGG | + | chr7_1:67217810-67217829 | None:intergenic | 65.0% |
| TGACGGAGTGGAGACGGTGG+CGG | + | chr7_1:67217816-67217835 | None:intergenic | 65.0% | |
| ! | GAGTGACGGAGTGGAGACGG+TGG | + | chr7_1:67217819-67217838 | None:intergenic | 65.0% |
| ! | AGTGGAGACGGTGGCGGTTG+CGG | + | chr7_1:67217810-67217829 | None:intergenic | 65.0% |
| TGACGGAGTGGAGACGGTGG+CGG | + | chr7_1:67217816-67217835 | None:intergenic | 65.0% | |
| ! | GAGTGACGGAGTGGAGACGG+TGG | + | chr7_1:67217819-67217838 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 67217683 | 67220049 | 67217683 | ID=Msa1032300;Name=Msa1032300 |
| chr7_1 | mRNA | 67217683 | 67220049 | 67217683 | ID=Msa1032300-mRNA-1;Parent=Msa1032300;Name=Msa1032300-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|1|0.87|1|1|1|8|7|321 |
| chr7_1 | exon | 67217683 | 67217770 | 67217683 | ID=Msa1032300-mRNA-1:exon:15395;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67218063 | 67218112 | 67218063 | ID=Msa1032300-mRNA-1:exon:15394;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67218235 | 67218286 | 67218235 | ID=Msa1032300-mRNA-1:exon:15393;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67218776 | 67218913 | 67218776 | ID=Msa1032300-mRNA-1:exon:15392;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67219047 | 67219310 | 67219047 | ID=Msa1032300-mRNA-1:exon:15391;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67219432 | 67219489 | 67219432 | ID=Msa1032300-mRNA-1:exon:15390;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67219571 | 67219680 | 67219571 | ID=Msa1032300-mRNA-1:exon:15389;Parent=Msa1032300-mRNA-1 |
| chr7_1 | exon | 67219837 | 67220049 | 67219837 | ID=Msa1032300-mRNA-1:exon:15388;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67219837 | 67220049 | 67219837 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67219571 | 67219680 | 67219571 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67219432 | 67219489 | 67219432 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67219047 | 67219310 | 67219047 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67218776 | 67218913 | 67218776 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67218235 | 67218286 | 67218235 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67218063 | 67218112 | 67218063 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | CDS | 67217690 | 67217770 | 67217690 | ID=Msa1032300-mRNA-1:cds;Parent=Msa1032300-mRNA-1 |
| chr7_1 | three_prime_UTR | 67217683 | 67217689 | 67217683 | ID=Msa1032300-mRNA-1:three_prime_utr;Parent=Msa1032300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
